CsaV3_2G011170 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CAAAGGGAAAAATAAAAAGAATGGTTTGTGGATTATTTGTGTGAGATTGTCCTATATTTCCTCAGGCTTATGTCTTTGGCGCTGCCACTTTTAACCAAAAAGCCCCAATTACTGCGCTTCTAAAGAAAAATCCTTCTACTTTCTCTCATAAATTCTCTGAGGGCCCTTCTTCTTCTTCTTCTTCATCAGCTCTACTTCCTTGGACCTCAATTTCCTTTTTAAAAAACTATTCACTTTCATTTTATCCTCAAAGTCACCTTCTCTTTCCAATTCATCAGGTAAGTACAAATCTCTGCTTCAATTTGCTGGTTTTTCGATGGGGGGTTTCTTCGATTTTGGTTTTTGAGTTGGGGTTTTGATGGATCCTTGATTTTCTTTGATGCGAAGCTTCTGGGTTTGAGTTTTTTTTTTTTTCTTTTTAAATTATCACTGGGATTTTCTTTTTATTCTGTTTGAGTGTTAAAATTGGGAGTTATTTTGGTGTGATGATTCCCCCGAAGCGAAAGAAATGGACTGAAGCTGAGGAGAGGACTTTGATTGATAAGTATGGAGAAATGTTATCTGATGGAACTTTAGCTAAGATGAAAACCCGTGAGAAAAAGTTTAGGCCAATTGCAAATTATGTGAACTCTGTGCACCATGTTCAAGATTCTTTGGCGTATCCATGGCAGTGGACTTGGAAAGATGTTTCTACTAAGGTCCAGAATATGAGGCACCAGTATTTGCTTGTGAAGCAGAAGATTAAGAAACCCGAATCCGGGGTTGAAAACTCCGGTGGGGATTCCAAGGAAGACTATGATTGGATGGAGGGTGTGACTTATTGGTCGAACTTCTTGAGATATAAGGATGTTTTTGGGGATGTAGCGGCGGCAAATAGCAGTTATAATGATTTGACGGTTGTTTCCAGTAGTGACCGGGGGAATGTAGACCAGTTTTTGGAGGTGAGTAGAGAGATGGATATGTTGGATTTTGCTCATATGGGACATTCTGGGGCAGGAAACTTCACTGCTGGGATTGATGGTGTTGACAATGAGGTGATGGGTTTGGGGTTTGAGTTTGATGGGGACGAAGCGGAAGAAAACTTTAATGATAATGATCAGCTGAAGGAGGATGGAGACAACAGCTTTTTCTGTGAAGAAGTTGATCCTAAGAAGAACAACTTTAAGAAGAAGAGGAAGGTGATGAAAAGATTGGAGAAGAAAGCTTGGGGATTTCTCGTGAACCAGCTAGGGCGGTTGAAGGATATGGAGGCTCAGTTTGAGAAACGTGAGGTCGACAGAGAACAAGAGCGTCGGAGGTGGGAGTGTTTAAGATACGAAATGGAGAAAAAATGGGAACAAAAATGGGAGGAAGGAGAAGCTCAAAGAGCGGAGAGGGAGAAAGCCCGTGATAAGTTGAGGAAGCAGAGAATTCAAGAGTGGGAAGCTATGGAAAAGTTGAGAATGGAGATGGAAAGAAGAAGAGAAGAGAAATTGAATCATGAGAGAGAGTGGGAGGAGAGAATCAGCAAGAGAAGGTTAGAATGGAAGAATAGGATAGACAATATGTTGAACCAGCACCGGGTCGAAATGAATCAGATCCAGACTCGCATTCTCCACGAGCAGCAAAACCTTACCGGTCAATTACTCGGTATTGTCTCTCAATGGACTGCTCATACTTCTGCACTCTCTGATCATACTAGTGCTAGTAACCATTATATTTCACAAATGATGCAAAATTTACATCATGTGAACGGAATTGTTCACAATGGCACAAGAGTTGAGGCAGACAACCAAGATGATCAATTTATTGTCGATGGTTGACGCTTTGTCTTATGAACTTGATCAGAAAACTATGTGGGATCTGCAAGAATATTTGCAGCAATGAATTAGTCTGTAAAGGTCTGAGAAATAGTTGTATGCATTCAATTTTTATTGTCTGGCACTTGGTCCATCTTGTGCCAATCTTTTTAGCTTGAATTATGACAATAAGAAATATAAAGTTCCTCTCATCTTTTTATTGTTATCTTCTGTTTTTATGCTGCAGATTTTATTCTCCTTGTTCTTCTTTATTAATGCTGGCTTTGTGATCTACTACCAAGCAAACTGATGATTTTTCTCATAGTCAATAAAATCACACCAACTTTTACTTGCTTTGTAATGTCACCTTGCATTTTTCCAATACATTTGCATCTCTCCCCTGTAATATTGAAGGACAAGAAAGCTGACAAGCTGGTTTTTCTTTAGTTCATGAATTTTGTTTCCAGCATTCAGGAGGCTTTGCAAGCGATGGGGTCGCCTCGATTGAGGTAAGAACACTGTATTTCTCTCTCTGTTGTAGGTTGAGAATGGTTTGTCCTTGTGAGTCTGTGGCGATTGAATATCCTTATGAAAGAATGGTTTTTTCATTTTATTTTTCTCGAAATTGCATTGGCGTGCATGAAACAGTGTGTAGACAAGAATAGTGATTTGGTGCAGTTAGTTAATCATTGAACATAAATTCAAATTTATACTGTCGGATCTGGTCTTGGTGATGATGCAGGGTCTTGAATCATTTTTCAAACTACTGGCTTATATTAGAACAGGAAACTTATTTTCAATTACAGGCACACACGACTCTTCTGCTTCAAGAAATAGTATTGCAAGTTCTGGAAACATAATATAACTTAAGCCACAAGTGAATTTTTGTTATAGATTTCTAATCTCTCTATCCTATAACATTCAAATTTGCTAAAAATGCGTCATCATATTTAGAACATAGGAGGGGAACAGCTTTTAAGGCCTAGTGACTAGCAGTAAGAAAGGATGTATCAGGCAAATACACTTGGGATGTATCACGCAAGGAGTGAAGTAGGAGGGGAGTTGTGAATTTTGGAGGGTTAGTGAAATAGCGGACCCAGGTGTGGGGAGTTAATCGCCTACAAACTCTTTGGACTAAAGAACTCCACTCCCCCAACTTGTACTCCTTCGGCCATACAACTCATTTGTAGGTATGATTGATGACCAATGGCTACATTGGATTGGGATTACACACTCACCTCTCAATATTTAAGATAAATTGAAATGCACCACCTATGTATATTGCATCACACTTTTGCAGGGTACCCAGTTGGACACTCTTGGCTTGGGCCCACAGAATGCCGATAATAGGAAGAGGTACTTCAATCTAAACTTGAATTATACTCAAACTCGACACATTATCGGATCATTTTACCATATCCATATTAATTGAAGATG ATGATTCCCCCGAAGCGAAAGAAATGGACTGAAGCTGAGGAGAGGACTTTGATTGATAAGTATGGAGAAATGTTATCTGATGGAACTTTAGCTAAGATGAAAACCCGTGAGAAAAAGTTTAGGCCAATTGCAAATTATGTGAACTCTGTGCACCATGTTCAAGATTCTTTGGCGTATCCATGGCAGTGGACTTGGAAAGATGTTTCTACTAAGGTCCAGAATATGAGGCACCAGTATTTGCTTGTGAAGCAGAAGATTAAGAAACCCGAATCCGGGGTTGAAAACTCCGGTGGGGATTCCAAGGAAGACTATGATTGGATGGAGGGTGTGACTTATTGGTCGAACTTCTTGAGATATAAGGATGTTTTTGGGGATGTAGCGGCGGCAAATAGCAGTTATAATGATTTGACGGTTGTTTCCAGTAGTGACCGGGGGAATGTAGACCAGTTTTTGGAGGTGAGTAGAGAGATGGATATGTTGGATTTTGCTCATATGGGACATTCTGGGGCAGGAAACTTCACTGCTGGGATTGATGGTGTTGACAATGAGGTGATGGGTTTGGGGTTTGAGTTTGATGGGGACGAAGCGGAAGAAAACTTTAATGATAATGATCAGCTGAAGGAGGATGGAGACAACAGCTTTTTCTGTGAAGAAGTTGATCCTAAGAAGAACAACTTTAAGAAGAAGAGGAAGGTGATGAAAAGATTGGAGAAGAAAGCTTGGGGATTTCTCGTGAACCAGCTAGGGCGGTTGAAGGATATGGAGGCTCAGTTTGAGAAACGTGAGGTCGACAGAGAACAAGAGCGTCGGAGGTGGGAGTGTTTAAGATACGAAATGGAGAAAAAATGGGAACAAAAATGGGAGGAAGGAGAAGCTCAAAGAGCGGAGAGGGAGAAAGCCCGTGATAAGTTGAGGAAGCAGAGAATTCAAGAGTGGGAAGCTATGGAAAAGTTGAGAATGGAGATGGAAAGAAGAAGAGAAGAGAAATTGAATCATGAGAGAGAGTGGGAGGAGAGAATCAGCAAGAGAAGGTTAGAATGGAAGAATAGGATAGACAATATGTTGAACCAGCACCGGGTCGAAATGAATCAGATCCAGACTCGCATTCTCCACGAGCAGCAAAACCTTACCGGTCAATTACTCGGTATTGTCTCTCAATGGACTGCTCATACTTCTGCACTCTCTGATCATACTAGTGCTAGTAACCATTATATTTCACAAATGATGCAAAATTTACATCATGTGAACGGAATTGTTCACAATGGCACAAGAGTTGAGGCAGACAACCAAGATGATCAATTTATTGTCGATGGTTGA ATGATTCCCCCGAAGCGAAAGAAATGGACTGAAGCTGAGGAGAGGACTTTGATTGATAAGTATGGAGAAATGTTATCTGATGGAACTTTAGCTAAGATGAAAACCCGTGAGAAAAAGTTTAGGCCAATTGCAAATTATGTGAACTCTGTGCACCATGTTCAAGATTCTTTGGCGTATCCATGGCAGTGGACTTGGAAAGATGTTTCTACTAAGGTCCAGAATATGAGGCACCAGTATTTGCTTGTGAAGCAGAAGATTAAGAAACCCGAATCCGGGGTTGAAAACTCCGGTGGGGATTCCAAGGAAGACTATGATTGGATGGAGGGTGTGACTTATTGGTCGAACTTCTTGAGATATAAGGATGTTTTTGGGGATGTAGCGGCGGCAAATAGCAGTTATAATGATTTGACGGTTGTTTCCAGTAGTGACCGGGGGAATGTAGACCAGTTTTTGGAGGTGAGTAGAGAGATGGATATGTTGGATTTTGCTCATATGGGACATTCTGGGGCAGGAAACTTCACTGCTGGGATTGATGGTGTTGACAATGAGGTGATGGGTTTGGGGTTTGAGTTTGATGGGGACGAAGCGGAAGAAAACTTTAATGATAATGATCAGCTGAAGGAGGATGGAGACAACAGCTTTTTCTGTGAAGAAGTTGATCCTAAGAAGAACAACTTTAAGAAGAAGAGGAAGGTGATGAAAAGATTGGAGAAGAAAGCTTGGGGATTTCTCGTGAACCAGCTAGGGCGGTTGAAGGATATGGAGGCTCAGTTTGAGAAACGTGAGGTCGACAGAGAACAAGAGCGTCGGAGGTGGGAGTGTTTAAGATACGAAATGGAGAAAAAATGGGAACAAAAATGGGAGGAAGGAGAAGCTCAAAGAGCGGAGAGGGAGAAAGCCCGTGATAAGTTGAGGAAGCAGAGAATTCAAGAGTGGGAAGCTATGGAAAAGTTGAGAATGGAGATGGAAAGAAGAAGAGAAGAGAAATTGAATCATGAGAGAGAGTGGGAGGAGAGAATCAGCAAGAGAAGGTTAGAATGGAAGAATAGGATAGACAATATGTTGAACCAGCACCGGGTCGAAATGAATCAGATCCAGACTCGCATTCTCCACGAGCAGCAAAACCTTACCGGTCAATTACTCGGTATTGTCTCTCAATGGACTGCTCATACTTCTGCACTCTCTGATCATACTAGTGCTAGTAACCATTATATTTCACAAATGATGCAAAATTTACATCATGTGAACGGAATTGTTCACAATGGCACAAGAGTTGAGGCAGACAACCAAGATGATCAATTTATTGTCGATGGTTGA MIPPKRKKWTEAEERTLIDKYGEMLSDGTLAKMKTREKKFRPIANYVNSVHHVQDSLAYPWQWTWKDVSTKVQNMRHQYLLVKQKIKKPESGVENSGGDSKEDYDWMEGVTYWSNFLRYKDVFGDVAAANSSYNDLTVVSSSDRGNVDQFLEVSREMDMLDFAHMGHSGAGNFTAGIDGVDNEVMGLGFEFDGDEAEENFNDNDQLKEDGDNSFFCEEVDPKKNNFKKKRKVMKRLEKKAWGFLVNQLGRLKDMEAQFEKREVDREQERRRWECLRYEMEKKWEQKWEEGEAQRAEREKARDKLRKQRIQEWEAMEKLRMEMERRREEKLNHEREWEERISKRRLEWKNRIDNMLNQHRVEMNQIQTRILHEQQNLTGQLLGIVSQWTAHTSALSDHTSASNHYISQMMQNLHHVNGIVHNGTRVEADNQDDQFIVDG
BLAST of CsaV3_2G011170 vs. NCBI nr
Match: XP_011649075.1 (PREDICTED: uncharacterized protein LOC105434578 [Cucumis sativus] >KGN61434.1 hypothetical protein Csa_2G121990 [Cucumis sativus]) HSP 1 Score: 659.4 bits (1700), Expect = 8.2e-186 Identity = 438/438 (100.00%), Postives = 438/438 (100.00%), Query Frame = 0
BLAST of CsaV3_2G011170 vs. NCBI nr
Match: XP_021658930.1 (uncharacterized protein LOC110648873 [Hevea brasiliensis] >XP_021658931.1 uncharacterized protein LOC110648873 [Hevea brasiliensis]) HSP 1 Score: 404.4 bits (1038), Expect = 4.8e-109 Identity = 295/448 (65.85%), Postives = 352/448 (78.57%), Query Frame = 0
BLAST of CsaV3_2G011170 vs. NCBI nr
Match: XP_012572280.1 (PREDICTED: uncharacterized protein LOC101489441 [Cicer arietinum]) HSP 1 Score: 396.0 bits (1016), Expect = 1.7e-106 Identity = 288/450 (64.00%), Postives = 334/450 (74.22%), Query Frame = 0
BLAST of CsaV3_2G011170 vs. NCBI nr
Match: XP_018844088.1 (PREDICTED: uncharacterized protein LOC109008449 [Juglans regia]) HSP 1 Score: 394.4 bits (1012), Expect = 4.9e-106 Identity = 303/443 (68.40%), Postives = 345/443 (77.88%), Query Frame = 0
BLAST of CsaV3_2G011170 vs. NCBI nr
Match: PON34336.1 (hypothetical protein PanWU01x14_345180 [Parasponia andersonii]) HSP 1 Score: 394.4 bits (1012), Expect = 4.9e-106 Identity = 315/446 (70.63%), Postives = 360/446 (80.72%), Query Frame = 0
BLAST of CsaV3_2G011170 vs. TrEMBL
Match: tr|A0A0A0LK54|A0A0A0LK54_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G121990 PE=4 SV=1) HSP 1 Score: 659.4 bits (1700), Expect = 5.5e-186 Identity = 438/438 (100.00%), Postives = 438/438 (100.00%), Query Frame = 0
BLAST of CsaV3_2G011170 vs. TrEMBL
Match: tr|A0A1S3E8Y4|A0A1S3E8Y4_CICAR (uncharacterized protein LOC101489441 OS=Cicer arietinum OX=3827 GN=LOC101489441 PE=4 SV=1) HSP 1 Score: 396.0 bits (1016), Expect = 1.1e-106 Identity = 288/450 (64.00%), Postives = 334/450 (74.22%), Query Frame = 0
BLAST of CsaV3_2G011170 vs. TrEMBL
Match: tr|A0A2I4GJL2|A0A2I4GJL2_9ROSI (uncharacterized protein LOC109008449 OS=Juglans regia OX=51240 GN=LOC109008449 PE=4 SV=1) HSP 1 Score: 394.4 bits (1012), Expect = 3.3e-106 Identity = 303/443 (68.40%), Postives = 345/443 (77.88%), Query Frame = 0
BLAST of CsaV3_2G011170 vs. TrEMBL
Match: tr|A0A2P5ACT4|A0A2P5ACT4_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_345180 PE=4 SV=1) HSP 1 Score: 394.4 bits (1012), Expect = 3.3e-106 Identity = 315/446 (70.63%), Postives = 360/446 (80.72%), Query Frame = 0
BLAST of CsaV3_2G011170 vs. TrEMBL
Match: tr|G7LHU3|G7LHU3_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=11406139 PE=4 SV=1) HSP 1 Score: 393.7 bits (1010), Expect = 5.6e-106 Identity = 292/449 (65.03%), Postives = 337/449 (75.06%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|