CsaV3_2G010170 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G010170
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr2 : 6940497 .. 6941367 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTACTTGGAAGATAAGGGGGTGAGTGGAGGTTGTGAGGAACTTGAGCAGCTTGTCCTAGGAGGCCTTTCTTATTACGTAGGGATTGAGGCCGTGGGCATGCAACAAGATTTCATTGGAGTCCTCAGTCTTAAATGATCGTCTTCTCTCTGATCTTATGGCTTCCTCCTCTTCTTGTTTGTACCCTCATCACCCTTTTTATTTATCACTATATGGATGGTGATGAGGTCCCAACTTTCCATTTTGCCCCTCTTGTACTTATGTCCACAAGGCATCCTTACAAATGCTAGGATCTCTTCTTTCTTGGTGGGTCGACAGTTTCTCCTTCGACATGGTGTTTCTCTTTTCTTCTTTCTCAAACTCCTCGGCCACGCCCTCGACCACCTTTGTCTCCCACTCTCTTCCCTTGGTTCTTCTTCCAAGGACCCGAATTCCTTTCGTGGATCTTGCAGGGATCCTTGTTGTTAACCCTGTAAAATCAACATTAGGCGAGGAGGTGCTTTTTATTTGAAGCTCAAGATCCTCCTTCCTTACCTGGTTGTTTCGCTTCTTCCTTTTTCCTATCTTCTTATTCTTGTTACATAATCTTTTATTCTTGTATATCTTTTCACTTTCTTTTGCCCCTTCTTTCCATAATCTTTTATTCCTGAATTTCCTTCATCGATCTTTTCGTTCTTTCGCGCTTTCTATGTTTTTGGAACCTTATCACTCTAGGCACCGAAAAGGAGGAGTGGTTGTTACTCATGATGGGGTTGCTAGATGAGAAATTTTGTAAAGGAGACTATTTCTTGGTGAAAGATGGCAGGAATACGATGAAGAACATGGAAGAAGAGCTTTTTGGAATGGTAGTATTTTGGAGATTAATTGA

mRNA sequence

ATGGATTACTTGGAAGATAAGGGGGTGAGTGGAGGTTGTGAGGAACTTGAGCAGCTTGTCCTAGGAGGCCTTTCTTATTACGTAGGGATTGAGGCCGTGGGCATGCAACAAGATTTCATTGGAGTCCTCAGTCCCAACTTTCCATTTTGCCCCTCTTGTACTTATGTCCACAAGGCATCCTTACAAATGCTAGGATCTCTTCTTTCTTGGTGGGTCGACAGTTTCTCCTTCGACATGGTGTTTCTCTTTTCTTCTTTCTCAAACTCCTCGGCCACGCCCTCGACCACCTTTGTCTCCCACTCTCTTCCCTTGGTTCTTCTTCCAAGGACCCGAATTCCTTTCGTGGATCTTGCAGGGATCCTTGTTGTTAACCCTGTAAAATCAACATTAGGCGAGGAGGAATACGATGAAGAACATGGAAGAAGAGCTTTTTGGAATGGTAGTATTTTGGAGATTAATTGA

Coding sequence (CDS)

ATGGATTACTTGGAAGATAAGGGGGTGAGTGGAGGTTGTGAGGAACTTGAGCAGCTTGTCCTAGGAGGCCTTTCTTATTACGTAGGGATTGAGGCCGTGGGCATGCAACAAGATTTCATTGGAGTCCTCAGTCCCAACTTTCCATTTTGCCCCTCTTGTACTTATGTCCACAAGGCATCCTTACAAATGCTAGGATCTCTTCTTTCTTGGTGGGTCGACAGTTTCTCCTTCGACATGGTGTTTCTCTTTTCTTCTTTCTCAAACTCCTCGGCCACGCCCTCGACCACCTTTGTCTCCCACTCTCTTCCCTTGGTTCTTCTTCCAAGGACCCGAATTCCTTTCGTGGATCTTGCAGGGATCCTTGTTGTTAACCCTGTAAAATCAACATTAGGCGAGGAGGAATACGATGAAGAACATGGAAGAAGAGCTTTTTGGAATGGTAGTATTTTGGAGATTAATTGA

Protein sequence

MDYLEDKGVSGGCEELEQLVLGGLSYYVGIEAVGMQQDFIGVLSPNFPFCPSCTYVHKASLQMLGSLLSWWVDSFSFDMVFLFSSFSNSSATPSTTFVSHSLPLVLLPRTRIPFVDLAGILVVNPVKSTLGEEEYDEEHGRRAFWNGSILEIN
Homology
[Close]
BLAST of CsaV3_2G010170 vs. NCBI nr
Match: KGN61321.1 (hypothetical protein Csa_2G081200 [Cucumis sativus])

HSP 1 Score: 313.9 bits (803), Expect = 3.0e-82
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0 

Query: 1   MDYLEDKGVSGGCEELEQLVLGGLSYYVGIEAVGMQQDFIGVLSPNFPFCPSCTYVHKAS 60
           MDYLEDKGVSGGCEELEQLVLGGLSYYVGIEAVGMQQDFIGVLSPNFPFCPSCTYVHKAS
Sbjct: 1   MDYLEDKGVSGGCEELEQLVLGGLSYYVGIEAVGMQQDFIGVLSPNFPFCPSCTYVHKAS 60

Query: 61  LQMLGSLLSWWVDSFSFDMVFLFSSFSNSSATPSTTFVSHSLPLVLLPRTRIPFVDLAGI 120
           LQMLGSLLSWWVDSFSFDMVFLFSSFSNSSATPSTTFVSHSLPLVLLPRTRIPFVDLAGI
Sbjct: 61  LQMLGSLLSWWVDSFSFDMVFLFSSFSNSSATPSTTFVSHSLPLVLLPRTRIPFVDLAGI 120

Query: 121 LVVNPVKSTLGEEEYDEEHGRRAFWNGSILEIN 154
           LVVNPVKSTLGEEEYDEEHGRRAFWNGSILEIN
Sbjct: 121 LVVNPVKSTLGEEEYDEEHGRRAFWNGSILEIN 153

[Close]
BLAST of CsaV3_2G010170 vs. TrEMBL
Match: tr|A0A0A0LMW9|A0A0A0LMW9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G081200 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 2.0e-82
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0 

Query: 1   MDYLEDKGVSGGCEELEQLVLGGLSYYVGIEAVGMQQDFIGVLSPNFPFCPSCTYVHKAS 60
           MDYLEDKGVSGGCEELEQLVLGGLSYYVGIEAVGMQQDFIGVLSPNFPFCPSCTYVHKAS
Sbjct: 1   MDYLEDKGVSGGCEELEQLVLGGLSYYVGIEAVGMQQDFIGVLSPNFPFCPSCTYVHKAS 60

Query: 61  LQMLGSLLSWWVDSFSFDMVFLFSSFSNSSATPSTTFVSHSLPLVLLPRTRIPFVDLAGI 120
           LQMLGSLLSWWVDSFSFDMVFLFSSFSNSSATPSTTFVSHSLPLVLLPRTRIPFVDLAGI
Sbjct: 61  LQMLGSLLSWWVDSFSFDMVFLFSSFSNSSATPSTTFVSHSLPLVLLPRTRIPFVDLAGI 120

Query: 121 LVVNPVKSTLGEEEYDEEHGRRAFWNGSILEIN 154
           LVVNPVKSTLGEEEYDEEHGRRAFWNGSILEIN
Sbjct: 121 LVVNPVKSTLGEEEYDEEHGRRAFWNGSILEIN 153

The following BLAST results are available for this feature:
BLAST of CsaV3_2G010170 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61321.13.0e-82100.00hypothetical protein Csa_2G081200 [Cucumis sativus][more]
BLAST of CsaV3_2G010170 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G010170 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G010170 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LMW9|A0A0A0LMW9_CUCSA2.0e-82100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G081200 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G010170.1CsaV3_2G010170.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_2G010170Cucumber (Gy14) v2cgybcucB064
CsaV3_2G010170Cucumber (Gy14) v1cgycucB287
CsaV3_2G010170Cucurbita maxima (Rimu)cmacucB0193
CsaV3_2G010170Cucurbita maxima (Rimu)cmacucB0928
CsaV3_2G010170Cucurbita moschata (Rifu)cmocucB0177
CsaV3_2G010170Cucurbita moschata (Rifu)cmocucB0920
CsaV3_2G010170Cucurbita moschata (Rifu)cmocucB0926
CsaV3_2G010170Cucurbita pepo (Zucchini)cpecucB0008
CsaV3_2G010170Cucurbita pepo (Zucchini)cpecucB1005
CsaV3_2G010170Wild cucumber (PI 183967)cpicucB080
CsaV3_2G010170Bottle gourd (USVL1VR-Ls)cuclsiB108
CsaV3_2G010170Melon (DHL92) v3.5.1cucmeB138
CsaV3_2G010170Melon (DHL92) v3.5.1cucmeB141
CsaV3_2G010170Melon (DHL92) v3.5.1cucmeB144
CsaV3_2G010170Melon (DHL92) v3.6.1cucmedB134
CsaV3_2G010170Melon (DHL92) v3.6.1cucmedB131
CsaV3_2G010170Melon (DHL92) v3.6.1cucmedB137
CsaV3_2G010170Watermelon (Charleston Gray)cucwcgB119
CsaV3_2G010170Watermelon (97103) v1cucwmB167
CsaV3_2G010170Watermelon (97103) v2cucwmbB114
CsaV3_2G010170Wax gourdcucwgoB146
CsaV3_2G010170Silver-seed gourdcarcucB0519