CsaV3_2G009130 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_2G009130
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	nuclear speckle splicing regulatory protein 1-like
Location	chr2 : 5641126 .. 5645105 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCAAGTATGGCCTGCAGCTTAGGGTTAAGCCATCGCAGCAGAAGCAGCCTACAAGACCACCCCTTCCTGCTCCTCTTGGATTTCAAGATGATGACGATGACGATGTTGAGAGAGAGATATCCCGCCAAGCTTCCAAGAATAAGGCGCTTAAGGATGTAAGTTAGCTTGTCTATGACTAATTTTTCCTATGTGTGTTGGTACCTTTTCCTTTACAGGTATTTATTGAACAAAGATAGCGTCATAGCAAGAATCTCAGGGTTGTATGCTAGACTTATTTTATCTTCCCCCCTTGAAAATCAAATCAGATTGAGGAGCAACATAAGAAAGCACTAGAGGAGGATCCATCTGTCTTTGACTATGATGGAGTTTATGATGAAATGAAAGAAAAGGTTGTTCAACCTCGAGCATATGATCGTGAAGAGCGAAAGGTATGTTCACAATTTGATTCAGGAACTTGCTTGGTTCCTTTGTTACTATTGCAGATTTCTTCTCTAAGGTATTGTTTTATTATTATTTCTTTTGAGAGATTTCAAGGTTTTATTTAATCATTAAAAATTTATTTTTCTTAAATTTCAATTTAGCAATTTTACTTCCAAAGGGTTTTAGGATTTGGCTGTTGCAGCTGTGAGCTCTATAACTTTACCAATGGTTGGGCCTTGGTATTATAAGTTTTATGGCTCTGTTTGAGATTGGAAGTTGTTAAATCGTTCAATAATCAAAATCTTTGAAACATGCCTAAAAAAACAAGAAGAAAAATTGAACTAGATATTATATTGTACCAACTAGAAGTACTATATATGTATCTACATTTCACCTAGAGTTGTGGACTTCAGTTGAAACATTGAAACACAAATCAATTGAACTAGATGTGTCTTCGAATCCTTCTAGGTTTGAGCTAGAACTTATAATTTTTTTTAAAAAAATATATATGATATTTCTAGAATTAGGAACTGACGAAACCAGTGCTTCATCTTACAAAAGAAAAAAATTTATCTGTTAGGATCCTCCACCTGAAAATCAGTAAAATCCCAACAAATACAGAAACAGAGGCAGCACTCTGTGATATCTATATATTGATAACCCAAAATATGATGTCCACAAGAGATTCAAAAGACATGAAAATGACAATGGAAATAAAGACAAGTCCAACTCCTTGGAGATGACTGGAAACCTCTCCCTCTAAAAGCTTCAACAACCTTTACTACAAAATACCTATCTGCACTGATATCTAAACATTCTATTTATACCTCTCGTTATTCGCGGGTTCCATCTGGTATATTGTTTTCCCCAATCCCTTCTCCTTGGCTTGACGTAAGGTTAAATACCTTTTTGCCCTTGCGTTCGTATTTGTGAATAATTGGGGGTCTAACAATATCATTCTAAAACTTAATGAAACATAAAAATGATATCTTAAATGAAATTGAATATGTATAAAATTACAATATTACCCTAATCTAATGCTTCCATTCGAGAAAACACTTATGGTATCCCTGCCTTATTATTGCAGCCAAAGTATATTCAAAATTTGATGAAAAAGGCACAAGAGAGAGAGAGAGAGCAGGAGATTATATATGAAAGAAAACTGGCCAAGGAGAGAAGCAAAGATGATCATCTCTATGCTGGTAAGGATAAATTTGTCACCGGTGCCTACAAAAAGAAACTTGCAGAACAAGCAAAATGGATGGAGGAAGAGCGCCTTCGACAACTTCGGGAGGAGAAAGAGGATGTATGTATTGTTTTCATTTTCCTCCTTGTGCATTTTTTATTTTCATTTATAATTTTATAAATTCTTATTATTTGTGGAATGTCTTCTATAGTGATATAATGAGCGAGTGCAAGCACTTTGTATATATTATTAGAACTGTAAGTTTTTTCATATTTTCCTTGTTGCAGAAGAAACCAACCTTTCATTGAGAAAAAAATGAAAAAAATACAAAGAGGTCAACAAGAGAAAAAACAAAAAATTCTCAAAAAGAGAAGTCCCCTTGAAGAAAGGGACTCCAATTTAAGGAAAAAAAGACCAGAAATATAACTACAATGTCTTCAGGACCAAACTTCAAAGAGGAACATTGAATCGAAACAAAAGTCCAAACATCCCATTAGTCCCTCATGACTCTTAACTTTTTATTCTTATTTTTTCCCATAAACTCCAAGAAGCACGACTTTCCACAAAGATGTCCCACTCTAATGAAAAGATGAATTGAAATTTTCGATAATCTCCGTGATAGGTTTGAAACCCTTAGCCCTGTTTTTCCGCTCCATCGGGCTGGAGCAAACAATTTTGTTCAATCTTGGTTAACCCTTGGAAGGAGTCGAAAAGTCAGGCCCTCACAATTTGAAGGAAAAACAATTTGGGATTAGTTGTCATATGAGCAGTTGCATCGGAGTCTATGACTCATTGTGTAAAGAAGGAAAAGCGACATCAATTCATGTTACCTGAATTAGCAATGTTTTAGGGGCACATGTTAACGATGAAGGAGATGCTTTCAACAATTTAGTTGACAAATCATGGATAGATGGAGCCCGTAATTGAGCCAAATGAGACATCACTGCGGGATCGAAAACCAAGTTCTGAGAAGCTTCTAACCAATGGAACAAAACAGCAACAAATCCGAAGAACCAAAAGAGTATTTTTTTCAAAGACCCTGGCACTTGATTAGATTTTAGTAGAACCAAATACACAGATCATCTGGAAACACAAATGGAGAAAAACCCAGCCAACAGAGCACAAAACAGATCTCCCACGTGCCAGCGCTGAGGAATTTGCGGCAGATGAAGAGGTGGCGCGTGAGCCTCACATGCTAGTCAGATGGCTTTGAAAATCTGAAGTTTGGTAGATCGGTAGCTGGGCTCCTTTTTTAGCTGGGAGATGTCAAAAAAAAAGAAAACTTCTGGCAGCGGCTGATGGACAACAAACAAACCGATGACGGCAAGGGTGGGCAAAATTGTAAACCCACCCCTCCAAAAAGCCCTAGATGTTATAAAAGGGTTCTAAATTCTCAAACCCTAATTTTCTCTTACGCTTTGATACCATGTTGAAGCTAGTGGAAATATGAAATAGCTCAATTCGTTTTATACAATAGGGTTCAATAGGTAGGCATACATGGAAACCCTAACTAAAGACTAATAAATTACAATAATGAACAAACGACTGATAAGCTCCTATATATATATTATAGCACTTTATATGTTGAATTTGGATTTACCAGTCCCCACTTATAGTTTGTTTTAAACCAAAGAAATTAAAAAAATTGAAGGACATTAATTAACTAAATTCTAATAGAAAGCGAAACCGTGGATGAAGATGGAAGGTAAAAATAGACCTATAACTATGTTGACTGGCATTTTCTTCAGGCTTTCTGCCTCTACCTATAAACAAAGCCCTTGGTATAGATATTTTTACAAAAGTATTCTATTTTATTTTATTTATTATTTACAGTTTCTCACAAAATATATACTTATTAGTCTATTTTGTTTTGATTAATATTATTTTTGTACTCATTTGAAGGTTACTAAGAAGAGCGACATGAGCGATTTTTACTTCAGTCTTCAAAAGAATGTTGCCTATGGTGCCCGAAATGCAATTGAGCCAACGGCACCCCCAAAGAAGCTTCAGTTAGAGAAGAAAGAGAAGCAGACAGAAGTTCATATTTTGGAGAAGCATGAAGAGAGTTGTAATGGCGATACCTTTAATGACCATCTGTTGCAAAACTCGAACTTACCTTCCTGTTCAGAGAAGACAATAGAAGAGCATCCTCATCTTGAAGAACGCCTTCCGTTTTCAAACAAAACGACACCATCTAATATAGAAGGTACCAGCCCCCCTACTTTACATGATAAAACTCCAGTTCAAGAACAGCCCAAGCATGAGCAAAGTGAACAACCACCAAAGAGTGATCACCATAAAAGAAATGAAGATGCTGTTGCTGCTGCAAAAGAGCGCTTTTTGGCTCGAAAAAGAGCCAAGGAGGTGTGA

mRNA sequence

ATGAGCAAGTATGGCCTGCAGCTTAGGGTTAAGCCATCGCAGCAGAAGCAGCCTACAAGACCACCCCTTCCTGCTCCTCTTGGATTTCAAGATGATGACGATGACGATGTTGAGAGAGAGATATCCCGCCAAGCTTCCAAGAATAAGGCGCTTAAGGATATTGAGGAGCAACATAAGAAAGCACTAGAGGAGGATCCATCTGTCTTTGACTATGATGGAGTTTATGATGAAATGAAAGAAAAGGTTGTTCAACCTCGAGCATATGATCGTGAAGAGCGAAAGCCAAAGTATATTCAAAATTTGATGAAAAAGGCACAAGAGAGAGAGAGAGAGCAGGAGATTATATATGAAAGAAAACTGGCCAAGGAGAGAAGCAAAGATGATCATCTCTATGCTGGTAAGGATAAATTTGTCACCGGTGCCTACAAAAAGAAACTTGCAGAACAAGCAAAATGGATGGAGGAAGAGCGCCTTCGACAACTTCGGGAGGAGAAAGAGGATGTTACTAAGAAGAGCGACATGAGCGATTTTTACTTCAGTCTTCAAAAGAATGTTGCCTATGGTGCCCGAAATGCAATTGAGCCAACGGCACCCCCAAAGAAGCTTCAGTTAGAGAAGAAAGAGAAGCAGACAGAAGTTCATATTTTGGAGAAGCATGAAGAGAGTTGTAATGGCGATACCTTTAATGACCATCTGTTGCAAAACTCGAACTTACCTTCCTGTTCAGAGAAGACAATAGAAGAGCATCCTCATCTTGAAGAACGCCTTCCGTTTTCAAACAAAACGACACCATCTAATATAGAAGGTACCAGCCCCCCTACTTTACATGATAAAACTCCAGTTCAAGAACAGCCCAAGCATGAGCAAAGTGAACAACCACCAAAGAGTGATCACCATAAAAGAAATGAAGATGCTGTTGCTGCTGCAAAAGAGCGCTTTTTGGCTCGAAAAAGAGCCAAGGAGGTGTGA

Coding sequence (CDS)

ATGAGCAAGTATGGCCTGCAGCTTAGGGTTAAGCCATCGCAGCAGAAGCAGCCTACAAGACCACCCCTTCCTGCTCCTCTTGGATTTCAAGATGATGACGATGACGATGTTGAGAGAGAGATATCCCGCCAAGCTTCCAAGAATAAGGCGCTTAAGGATATTGAGGAGCAACATAAGAAAGCACTAGAGGAGGATCCATCTGTCTTTGACTATGATGGAGTTTATGATGAAATGAAAGAAAAGGTTGTTCAACCTCGAGCATATGATCGTGAAGAGCGAAAGCCAAAGTATATTCAAAATTTGATGAAAAAGGCACAAGAGAGAGAGAGAGAGCAGGAGATTATATATGAAAGAAAACTGGCCAAGGAGAGAAGCAAAGATGATCATCTCTATGCTGGTAAGGATAAATTTGTCACCGGTGCCTACAAAAAGAAACTTGCAGAACAAGCAAAATGGATGGAGGAAGAGCGCCTTCGACAACTTCGGGAGGAGAAAGAGGATGTTACTAAGAAGAGCGACATGAGCGATTTTTACTTCAGTCTTCAAAAGAATGTTGCCTATGGTGCCCGAAATGCAATTGAGCCAACGGCACCCCCAAAGAAGCTTCAGTTAGAGAAGAAAGAGAAGCAGACAGAAGTTCATATTTTGGAGAAGCATGAAGAGAGTTGTAATGGCGATACCTTTAATGACCATCTGTTGCAAAACTCGAACTTACCTTCCTGTTCAGAGAAGACAATAGAAGAGCATCCTCATCTTGAAGAACGCCTTCCGTTTTCAAACAAAACGACACCATCTAATATAGAAGGTACCAGCCCCCCTACTTTACATGATAAAACTCCAGTTCAAGAACAGCCCAAGCATGAGCAAAGTGAACAACCACCAAAGAGTGATCACCATAAAAGAAATGAAGATGCTGTTGCTGCTGCAAAAGAGCGCTTTTTGGCTCGAAAAAGAGCCAAGGAGGTGTGA

Protein sequence

MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKEKVVQPRAYDREERKPKYIQNLMKKAQEREREQEIIYERKLAKERSKDDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMSDFYFSLQKNVAYGARNAIEPTAPPKKLQLEKKEKQTEVHILEKHEESCNGDTFNDHLLQNSNLPSCSEKTIEEHPHLEERLPFSNKTTPSNIEGTSPPTLHDKTPVQEQPKHEQSEQPPKSDHHKRNEDAVAAAKERFLARKRAKEV

Homology

[Close]

BLAST of CsaV3_2G009130 vs. NCBI nr
Match: XP_004152856.1 (PREDICTED: nuclear speckle splicing regulatory protein 1-like [Cucumis sativus] >KGN61209.1 hypothetical protein Csa_2G070270 [Cucumis sativus])

HSP 1 Score: 598.6 bits (1542), Expect = 1.3e-167
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0


Query: 1   MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQXXXXXXXXREISRQASKNKALKDIEEQHKK 60
           MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQXXXXXXXXREISRQASKNKALKDIEEQHKK
Sbjct: 1   MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQXXXXXXXXREISRQASKNKALKDIEEQHKK 60

Query: 61  ALEEDPSVFDYDGVYDEMKEKVVQPRAYDREERKPKYIQNLMKKAQEREREQEIIYERKL 120
           ALEEDPSVFDYDGVYDEMKEKVVQPRAYDREERKPKYIQNLMKKAQEREREQEIIYERKL
Sbjct: 61  ALEEDPSVFDYDGVYDEMKEKVVQPRAYDREERKPKYIQNLMKKAQEREREQEIIYERKL 120

Query: 121 AKERSKDDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMSDFYFS 180
           AKERSKDDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMSDFYFS
Sbjct: 121 AKERSKDDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMSDFYFS 180

Query: 181 LQKNVAYGARNAIEPTAPPKKLQLEKKEKQTEVHILEKHEESCNGDTFNDHLLQNSNLPS 240
           LQKNVAYGARNAIEPTAPPKKLQLEKKEKQTEVHILEKHEESCNGDTFNDHLLQNSNLPS
Sbjct: 181 LQKNVAYGARNAIEPTAPPKKLQLEKKEKQTEVHILEKHEESCNGDTFNDHLLQNSNLPS 240

Query: 241 CSEKTIEEHPHLEERLPFSNKTTPSNIEGTSPPTLHDKTPVQEQPKHEQSEQPPKSDHHK 300
           CSEKTIEEHPHLEERLPFSNKTTPSNIEGTSPPTLHDKTPVQEQPKHEQSEQPPKSDHHK
Sbjct: 241 CSEKTIEEHPHLEERLPFSNKTTPSNIEGTSPPTLHDKTPVQEQPKHEQSEQPPKSDHHK 300

Query: 301 RNEDAVAAAKERFLARKRAKEV 323
           RNEDAVAAAKERFLARKRAKEV
Sbjct: 301 RNEDAVAAAKERFLARKRAKEV 322

[Close]

BLAST of CsaV3_2G009130 vs. NCBI nr
Match: XP_008450616.1 (PREDICTED: nuclear speckle splicing regulatory protein 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 540.0 bits (1390), Expect = 5.4e-150
Identity = 292/322 (90.68%), Postives = 294/322 (91.30%), Query Frame = 0


Query: 1   MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQXXXXXXXXREISRQASKNKALKDIEEQHKK 60
           MSKYGLQLRVKPSQQKQP RPPLPAPLGFQ        REISRQASKNKALKDIEEQHKK
Sbjct: 13  MSKYGLQLRVKPSQQKQPKRPPLPAPLGFQDDDDDNVEREISRQASKNKALKDIEEQHKK 72

Query: 61  ALEEDPSVFDYDGVYDEMKEKVVQPRAYDREERKPKYIQNLMKKAQEREREQEIIYERKL 120
           ALEEDPSVFDYDGVYDEMKEK VQPRAYDREERKPKYIQNLMKKAQEREREQEIIYERKL
Sbjct: 73  ALEEDPSVFDYDGVYDEMKEKAVQPRAYDREERKPKYIQNLMKKAQEREREQEIIYERKL 132

Query: 121 AKERSKDDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMSDFYFS 180
           AKERSKDDHLYAGKDKFVT AYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMSDFYFS
Sbjct: 133 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMSDFYFS 192

Query: 181 LQKNVAYGARNAIEPTAPPKKLQLEKKEKQTEVHILEKHEESCNGDTFNDHLLQNSNLPS 240
           LQKNVAYGARNAIEP A PKKLQLEKKEKQTEVHILEKHEESCNGDTFNDH LQNS    
Sbjct: 193 LQKNVAYGARNAIEPRATPKKLQLEKKEKQTEVHILEKHEESCNGDTFNDHQLQNS---- 252

Query: 241 CSEKTIEEHPHLEERLPFSNKTTPSNIEGTSPPTLHDKTPVQEQPKHEQSEQPPKSDHHK 300
              KTIEEH HLEERL  SNKTTPS+IEGTSPPTLHDK  VQE+PKHE SEQPPK DHHK
Sbjct: 253 ---KTIEEHSHLEERLSASNKTTPSDIEGTSPPTLHDKALVQERPKHELSEQPPKRDHHK 312

Query: 301 RNEDAVAAAKERFLARKRAKEV 323
           RNEDAVAAAKERFLARKRAKEV
Sbjct: 313 RNEDAVAAAKERFLARKRAKEV 327

[Close]

BLAST of CsaV3_2G009130 vs. NCBI nr
Match: XP_016902161.1 (PREDICTED: nuclear speckle splicing regulatory protein 1-like isoform X2 [Cucumis melo] >XP_016902163.1 PREDICTED: nuclear speckle splicing regulatory protein 1-like isoform X2 [Cucumis melo])

HSP 1 Score: 540.0 bits (1390), Expect = 5.4e-150
Identity = 292/322 (90.68%), Postives = 294/322 (91.30%), Query Frame = 0


Query: 1   MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQXXXXXXXXREISRQASKNKALKDIEEQHKK 60
           MSKYGLQLRVKPSQQKQP RPPLPAPLGFQ        REISRQASKNKALKDIEEQHKK
Sbjct: 1   MSKYGLQLRVKPSQQKQPKRPPLPAPLGFQDDDDDNVEREISRQASKNKALKDIEEQHKK 60

Query: 61  ALEEDPSVFDYDGVYDEMKEKVVQPRAYDREERKPKYIQNLMKKAQEREREQEIIYERKL 120
           ALEEDPSVFDYDGVYDEMKEK VQPRAYDREERKPKYIQNLMKKAQEREREQEIIYERKL
Sbjct: 61  ALEEDPSVFDYDGVYDEMKEKAVQPRAYDREERKPKYIQNLMKKAQEREREQEIIYERKL 120

Query: 121 AKERSKDDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMSDFYFS 180
           AKERSKDDHLYAGKDKFVT AYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMSDFYFS
Sbjct: 121 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMSDFYFS 180

Query: 181 LQKNVAYGARNAIEPTAPPKKLQLEKKEKQTEVHILEKHEESCNGDTFNDHLLQNSNLPS 240
           LQKNVAYGARNAIEP A PKKLQLEKKEKQTEVHILEKHEESCNGDTFNDH LQNS    
Sbjct: 181 LQKNVAYGARNAIEPRATPKKLQLEKKEKQTEVHILEKHEESCNGDTFNDHQLQNS---- 240

Query: 241 CSEKTIEEHPHLEERLPFSNKTTPSNIEGTSPPTLHDKTPVQEQPKHEQSEQPPKSDHHK 300
              KTIEEH HLEERL  SNKTTPS+IEGTSPPTLHDK  VQE+PKHE SEQPPK DHHK
Sbjct: 241 ---KTIEEHSHLEERLSASNKTTPSDIEGTSPPTLHDKALVQERPKHELSEQPPKRDHHK 300

Query: 301 RNEDAVAAAKERFLARKRAKEV 323
           RNEDAVAAAKERFLARKRAKEV
Sbjct: 301 RNEDAVAAAKERFLARKRAKEV 315

[Close]

BLAST of CsaV3_2G009130 vs. NCBI nr
Match: XP_023520694.1 (nuclear speckle splicing regulatory protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 474.6 bits (1220), Expect = 2.8e-130
Identity = 266/323 (82.35%), Postives = 286/323 (88.54%), Query Frame = 0


Query: 1   MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQXXXXXXXXREISRQASKNKALKDIEEQHKK 60
           MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQXXXXXXXXREISRQASKNKALKDIEEQHKK
Sbjct: 1   MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQXXXXXXXXREISRQASKNKALKDIEEQHKK 60

Query: 61  ALEEDPSVFDYDGVYDEMKEKVVQPRAYDREERKPKYIQNLMKKAQEREREQEIIYERKL 120
           AL EDPSVFDYDGVYDEMKEK V PRAYDREERKPKYIQNLMKKA+EREREQE+IYERKL
Sbjct: 61  ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL 120

Query: 121 AKERSKDDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMSDFYFS 180
           AKERSKDDHLYAGKDKFVT AYKKKLAEQAKWMEEERLRQLREEK+DVTKKSD+SDFYF+
Sbjct: 121 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN 180

Query: 181 LQKNVAYGARNAIEPTAPPKKLQLEKKEKQTEVHILEKHEESCNGDTFNDHLL-QNSNLP 240
           LQKN+AYGA NA+EP  PP+KLQ    EKQ EV  L+KHEES N D  NDH   +  + P
Sbjct: 181 LQKNIAYGAGNAVEPREPPQKLQ---SEKQAEVQKLKKHEESVNADIVNDHQSPKYPSSP 240

Query: 241 SCSEKTIEEHPHLEERLPFSNKTTPSNIEGTSPPTLHDKTPVQEQPKHEQSEQPPKSDHH 300
           S S KTIE+  HLEE L  SNKTTPS++ GTSPP LH+KTPV++QP+H+Q EQ PK DHH
Sbjct: 241 SQSAKTIEQDRHLEEHLSNSNKTTPSDVRGTSPPPLHNKTPVEKQPEHDQGEQQPKRDHH 300

Query: 301 KRNEDAVAAAKERFLARKRAKEV 323
           KR+EDAVAAAKERFLARKR KEV
Sbjct: 301 KRSEDAVAAAKERFLARKRTKEV 320

[Close]

BLAST of CsaV3_2G009130 vs. NCBI nr
Match: XP_022927406.1 (nuclear speckle splicing regulatory protein 1-like [Cucurbita moschata] >XP_022927407.1 nuclear speckle splicing regulatory protein 1-like [Cucurbita moschata])

HSP 1 Score: 473.8 bits (1218), Expect = 4.7e-130
Identity = 265/323 (82.04%), Postives = 286/323 (88.54%), Query Frame = 0


Query: 1   MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQXXXXXXXXREISRQASKNKALKDIEEQHKK 60
           MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQXXXXXXXXREISRQASKNKALKDIEEQHKK
Sbjct: 1   MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQXXXXXXXXREISRQASKNKALKDIEEQHKK 60

Query: 61  ALEEDPSVFDYDGVYDEMKEKVVQPRAYDREERKPKYIQNLMKKAQEREREQEIIYERKL 120
           AL EDPSVFDYDGVYDEMKEK V PRAYDREERKPKYIQNLMKKA+EREREQE+IYERKL
Sbjct: 61  ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL 120

Query: 121 AKERSKDDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMSDFYFS 180
           AKERSKDDHLYAGKDKFVT AYKKKLAEQAKWMEEERLRQLREEK+DVTKKSD+SDFYF+
Sbjct: 121 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN 180

Query: 181 LQKNVAYGARNAIEPTAPPKKLQLEKKEKQTEVHILEKHEESCNGDTFNDHLL-QNSNLP 240
           LQKN+AYGA NA+EP  PP+KLQ    EKQ EV  L+KHEES N D  NDH   +  + P
Sbjct: 181 LQKNIAYGAGNAVEPREPPQKLQ---SEKQAEVQKLKKHEESANADIVNDHQSPKYPSSP 240

Query: 241 SCSEKTIEEHPHLEERLPFSNKTTPSNIEGTSPPTLHDKTPVQEQPKHEQSEQPPKSDHH 300
           S S KTIE+  HLEE L  SNKTTPS++ GTSPP LH++TPV++QP+H+Q EQ PK DHH
Sbjct: 241 SQSAKTIEQDRHLEEHLSNSNKTTPSDVRGTSPPPLHNRTPVEKQPEHDQGEQQPKRDHH 300

Query: 301 KRNEDAVAAAKERFLARKRAKEV 323
           KR+EDAVAAAKERFLARKR KEV
Sbjct: 301 KRSEDAVAAAKERFLARKRTKEV 320

[Close]

BLAST of CsaV3_2G009130 vs. TAIR10
Match: AT2G27285.1 (Coiled-coil domain-containing protein 55 (DUF2040))

HSP 1 Score: 242.7 bits (618), Expect = 3.2e-64
Identity = 163/322 (50.62%), Postives = 199/322 (61.80%), Query Frame = 0


Query: 1   MSKYGLQLRVKPSQQKQ-PTRPPLPAPLGFQXXXXXXXXREISRQASKNKALKDIEEQHK 60
           M KYGLQ+R  PSQ+KQ  +RPPL     F         +EISRQA+K KA K+IEEQHK
Sbjct: 1   MKKYGLQIRA-PSQKKQSSSRPPLRPASIFDEEEDHDVEKEISRQATKTKAHKEIEEQHK 60

Query: 61  KALEEDPSVFDYDGVYDEMKEKVVQPRAYDREERKPKYIQNLMKKAQEREREQEIIYERK 120
           KALEEDPS F YD VYD+MK+K V PR  DREERKP+YIQNLMK+A+ RE+E EI+YERK
Sbjct: 61  KALEEDPSAFSYDEVYDDMKQKAVLPRMQDREERKPRYIQNLMKQAERREKEHEIVYERK 120

Query: 121 LAKERSKDDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMSDFYF 180
           LAKER KD+HL++ K+KFVTGAYK+KL EQ KW+ EERLR+LREE++DVTKK D+SDFYF
Sbjct: 121 LAKEREKDEHLFSDKEKFVTGAYKRKLEEQKKWLAEERLRELREERDDVTKKKDLSDFYF 180

Query: 181 SLQKNVAYGARNAIEPTAPPKKLQLEKKEKQTEVHILEKHEESCNGDTFNDHLLQNSNLP 240
           ++ KNVA+GAR      A  +KL                                 S   
Sbjct: 181 NIGKNVAFGAREVEAKEA--EKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPEK 240

Query: 241 SCSEKTIEEHPHLEERL-PFSNKTTPSNIEGTSPPTLHDKTPVQEQPKHEQSEQPPKSDH 300
             S  + E      + L P   +   S  E  S  T   K+ ++E  K    E P   + 
Sbjct: 241 EVSPDSGEFGSSRSKSLEPLEAEQAVSEKEMGSDGTEERKSSIKEAAK----EVPKAIND 300

Query: 301 HKRNEDAVAAAKERFLARKRAK 321
            KR EDA+AAAKERFLARK+AK
Sbjct: 301 QKRREDAIAAAKERFLARKKAK 315

[Close]

BLAST of CsaV3_2G009130 vs. TAIR10
Match: AT1G55928.1 (Coiled-coil domain-containing protein 55 (DUF2040))

HSP 1 Score: 179.5 bits (454), Expect = 3.3e-45
Identity = 124/292 (42.47%), Postives = 177/292 (60.62%), Query Frame = 0


Query: 1   MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQXXXXXXXXREISRQASKNKALKDIEEQHKK 60
           M+K+GLQLR   S++  P      AP+  +        +EISRQASK K+LK  EEQHKK
Sbjct: 12  MNKFGLQLRKTLSKKVLPI-----APILGEDEEDNDVDKEISRQASKTKSLKKFEEQHKK 71

Query: 61  ALEEDPSVFDYDGVYDEMKEKVVQPRAYDREE-RKPKYIQNLMKKAQEREREQEIIYERK 120
           ALEEDP  F YD VYD+ K++   PR ++R+E  KP Y Q + +KA  R++E+EI+YERK
Sbjct: 72  ALEEDPCAFAYDEVYDDTKQEAPLPRLHERQECNKPIYNQLMKEKADRRQKEREIVYERK 131

Query: 121 LAKERSKDDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMSDFYF 180
           LAKER+K+ HL+  + K VTG+YK+KL E+ +W+ EERLR+L EEK+DVTKK D+SDFYF
Sbjct: 132 LAKERAKEQHLFPDQVKVVTGSYKRKLEERDQWLSEERLRELGEEKDDVTKKKDLSDFYF 191

Query: 181 SLQKNVAYGARNAIEPTAPPKKLQLEKKEKQTEVHILEKHEESCNGDTFNDHLLQNSNLP 240
           ++ KNVA+GAR+        K  + E+ ++Q +V  LE+  E    ++    +L +S   
Sbjct: 192 NIGKNVAFGARDI-------KARETERLKEQRKVPKLEELREKMKTESPERVVLPDSRDI 251

Query: 241 SCSEKTI-----EEHPHLEERLPFSNKTTPSNIEGTSPPTLHDKTPVQEQPK 287
             S + I      EH   EE++         N + T    L  K   + +P+
Sbjct: 252 GSSCRIIVELQEAEHVASEEKM---------NSDATEERDLSIKGAAKHEPR 282

[Close]

BLAST of CsaV3_2G009130 vs. TAIR10
Match: AT2G27280.1 (Coiled-coil domain-containing protein 55 (DUF2040))

HSP 1 Score: 167.5 bits (423), Expect = 1.3e-41
Identity = 125/322 (38.82%), Postives = 172/322 (53.42%), Query Frame = 0


Query: 1   MSKYGLQLRVKPSQQKQPTRPPL--PAPLGFQXXXXXXXXREISRQASKNKALKDIEEQH 60
           + KYGLQ+R  PSQ+KQ +  PL   A +  +   XXXXX                    
Sbjct: 142 IKKYGLQIRA-PSQKKQSSSRPLLRTASIFGEDDEXXXXXXXXXXXXXXXXXXXXXXXXX 201

Query: 61  KKALEEDPSVFDYDGVYDEMKEKVVQPRAYDREERKPKYIQNLMKKAQEREREQEIIYER 120
           KKA+EEDPS F YD VYD++K +   PR  DREE K +YIQ++MK+A+ RE+E EI+YER
Sbjct: 202 KKAIEEDPSAFAYDEVYDDIKHEAALPRMQDREEHKSRYIQHIMKQAERREKEHEIVYER 261

Query: 121 KLAKERSKDDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMSDFY 180
           KLAKER+KD+HLY+ K+KFVTG +K+KL EQ KW+EEERLR+LREE++DVTKK+D+S+FY
Sbjct: 262 KLAKERAKDEHLYSDKEKFVTGPFKRKLEEQKKWLEEERLRELREERDDVTKKNDLSEFY 321

Query: 181 FSLQKNVAYGARNAIEPTAPPKKLQLEKKEKQTEVHILEKHEESCNGDTFNDHLLQNSNL 240
            ++ KNVA+GAR+ IE     +                                  + + 
Sbjct: 322 INIGKNVAFGARD-IEAREAGRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGDF 381

Query: 241 PSCSEKTIEEHPHLEERLPFSNKTTPSNIEGTSPPTLHDKTPVQEQPKHEQSEQPPKSDH 300
              S+K++                                     +P+    ++  K   
Sbjct: 382 GLSSKKSV-------------------------------------KPQDASIKEEAKETQ 424

Query: 301 HKRNEDAVAAAKERFLARKRAK 321
               EDA+A AKERFL+RK+AK
Sbjct: 442 KATREDAIATAKERFLSRKKAK 424

[Close]

BLAST of CsaV3_2G009130 vs. Swiss-Prot
Match: sp|Q2KIC0|NSRP1_BOVIN (Nuclear speckle splicing regulatory protein 1 OS=Bos taurus OX=9913 GN=NSRP1 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.1e-13
Identity = 63/184 (34.24%), Postives = 101/184 (54.89%), Query Frame = 0


Query: 41  ISRQASKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKEKVVQ--PRAYDREERKPKYI 100
           + R+A+K +A+K  + + +KAL ED +V++YD +YDEM++K  +  P+    ++RKPKYI
Sbjct: 46  LQREAAKKQAMKQTKLEIQKALAEDSTVYEYDSIYDEMQKKKEESNPKLLLGKDRKPKYI 105

Query: 101 QNLMKKAQEREREQEIIYERKLAKERSKDDHLYAGKDKFVTGAYKKKLAEQAKWMEEERL 160
            NL+K  + R++EQE   E+ +  ER  +   +  K+ FVT AYK               
Sbjct: 106 HNLLKAVEIRKKEQEKRMEKXIXXEREMEKGEFDDKEAFVTSAYKXXXXXXXXXXXXXXX 165

Query: 161 RQLREEKEDVTKKSDMSDFYFSLQKNVAYGARNAIEPTAPPKKLQLEKKEKQTEVHILEK 220
               E + DVTK+ D+S FY  L  N A G      PT   ++ + E KE++++ +  E 
Sbjct: 166 XXXLEARLDVTKQRDLSGFYRHL-LNQAVGEEEV--PTCSFREARSEIKEEKSKGYSDEV 225

Query: 221 HEES 223
             ES
Sbjct: 226 SSES 226

[Close]

BLAST of CsaV3_2G009130 vs. Swiss-Prot
Match: sp|Q9H0G5|NSRP1_HUMAN (Nuclear speckle splicing regulatory protein 1 OS=Homo sapiens OX=9606 GN=NSRP1 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 4.2e-13
Identity = 60/178 (33.71%), Postives = 90/178 (50.56%), Query Frame = 0


Query: 3   KYGLQLRVKPSQQKQPTRPPLPAPLGFQXXXXXXXXREISRQASKNKALKDIEEQHKKAL 62
           +YGL L  K  Q     + P                  + R+A+K +A+K  + + +KAL
Sbjct: 7   QYGLILPKKTQQLHPVLQKPSVFGNDSDDDDETSVSESLQREAAKKQAMKQTKLEIQKAL 66

Query: 63  EEDPSVFDYDGVYDEMKEKVVQ--PRAYDREERKPKYIQNLMKKAQEREREQEIIYERKL 122
            ED +V++YD +YDEM++K  +  P+    ++RKPKYI NL+K  + R++EQE   E+  
Sbjct: 67  AEDATVYEYDSIYDEMQKKKEENNPKLLLGKDRKPKYIHNLLKAVEIRKKEQEKRMEKXX 126

Query: 123 AKERSKDDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMSDFY 179
              R  +   +  K+ FVT AYKKKL                E   DVTK+ D+S FY
Sbjct: 127 XXXREMEKGEFDDKEAFVTSAYKKKLXXXXXXXXXXXXAAALEACLDVTKQKDLSGFY 184

[Close]

BLAST of CsaV3_2G009130 vs. Swiss-Prot
Match: sp|Q5NCR9|NSRP1_MOUSE (Nuclear speckle splicing regulatory protein 1 OS=Mus musculus OX=10090 GN=Nsrp1 PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.3e-11
Identity = 75/263 (28.52%), Postives = 124/263 (47.15%), Query Frame = 0


Query: 41  ISRQASKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKEKVVQ--PRAYDREERKPKYI 100
           + R+A+K +A+K  + + +KAL ED +V++YD VYDEM++K  +  P+    ++RKPKYI
Sbjct: 44  LQREAAKKQAMKQTKLEIQKALAEDSTVYEYDSVYDEMQKKKEENNPKLLPGKDRKPKYI 103

Query: 101 QNLMKKAQEREREQEIIYERKLAKERSKDDHLYAGKDKFVTGAYKKKLAEQAKWMEEERL 160
            NL+K  + R++EQE   E+K+ +ER  ++  +  K+ FVT AYK               
Sbjct: 104 HNLLKAVEIRKKEQEKRMEKKIQREREMENGEFDDKEAFVTSAYKXXXXXXXXXXXXXXX 163

Query: 161 RQLREEKEDVTKKSDMSDFYFSLQKNVAYGARNAIEPTAPPKKLQLEKKEKQTEVHILEK 220
               E   DVTK+ D+S FY  L  N A G   A  P +  ++ +   KE++   +  E 
Sbjct: 164 XXALEAHLDVTKQKDLSGFYRHL-LNQAVGEEAA--PKSSFREARTVIKEEKLRGYPDET 223

Query: 221 HEESCNGDTFNDHLLQNSNLPSCSEKTIEEHPHLEERLPFSNKTTPSNIEGTSPPTLHDK 280
           + ES           Q S +     +  EE+P  +      +       +        D 
Sbjct: 224 NSES--------RPPQQSCVLQRGAQEAEENPDADREFDDESSEDGEKRDHKVKSRGEDT 283

Query: 281 TPVQEQPKHEQSEQPPKSDHHKR 302
               + PKH ++    +S   +R
Sbjct: 284 GASMKHPKHHKNRAHSRSSSEER 295

[Close]

BLAST of CsaV3_2G009130 vs. Swiss-Prot
Match: sp|Q4FZU3|NSRP1_RAT (Nuclear speckle splicing regulatory protein 1 OS=Rattus norvegicus OX=10116 GN=Nsrp1 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 3.0e-11
Identity = 63/214 (29.44%), Postives = 112/214 (52.34%), Query Frame = 0


Query: 41  ISRQASKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKEKVVQ--PRAYDREERKPKYI 100
           + R+A+K +A++  + + +KAL ED +V++YD +YDEM++K  +  P+    ++RKPKYI
Sbjct: 44  LQREAAKKQAMRQTKLEIQKALAEDSTVYEYDSIYDEMQKKKEENNPKLLMGKDRKPKYI 103

Query: 101 QNLMKKAQEREREQEIIYERKLAKERSKDDHLYAGKDKFVTGAYKKKLAEQAKWMEEERL 160
            NL+K  + R++EQE   E+     R  +   +  K+ FVT AYK               
Sbjct: 104 HNLLKAVEIRKKEQEKRMEKXXXXXREMEKGEFDDKEAFVTSAYKXXXXXXXXXXXXXXX 163

Query: 161 RQLREEKEDVTKKSDMSDFYFSLQKNVAYGARNAIEPTAPPKKLQLEKKEK----QTEVH 220
               E + DVTK+ D+S FY  L  N A G   A+  ++  +   + K+EK      E +
Sbjct: 164 XXALEARLDVTKQKDLSGFYRHL-LNQAVG-EEAVPKSSFREARTVIKEEKLRGYPDETN 223

Query: 221 ILEKHEESCNGDTFNDHLLQNSNLPSCSEKTIEE 249
              + +++C   +  +   +N +  S SE++ ++
Sbjct: 224 SENRPQQNCALQSGVEEAEENPDADSDSEESCDD 255

[Close]

BLAST of CsaV3_2G009130 vs. Swiss-Prot
Match: sp|Q09252|NSRP1_CAEEL (Nuclear speckle splicing regulatory protein 1 homolog OS=Caenorhabditis elegans OX=6239 GN=ccdc-55 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 3.7e-09
Identity = 56/182 (30.77%), Postives = 94/182 (51.65%), Query Frame = 0


Query: 45  ASKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMK----EKVVQPRAYDREERKPKYIQN 104
           AS  +  K  E +H+KA  EDP++FDYDG YDE++    EK  + R  D+  R+ KY +N
Sbjct: 47  ASVIRVQKAAEREHQKAEAEDPTIFDYDGNYDEIQAIKNEKKEEARKADK-NRESKYAEN 106

Query: 105 LMKKAQEREREQEIIYERKLAKERSKDDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQ 164
           ++K    R+ EQ    ER+  +ER K+   +  K+ FVTGAY+K         ++E +++
Sbjct: 107 IIKAHARRQLEQFSREERQQLREREKEGDEFDDKEVFVTGAYRK---------QQEEVKK 166

Query: 165 LREEKEDVTKKSDMSDFYFSLQKNVAYGARNAIEPTAPPKKLQLEKKEKQTEVHILEKHE 223
            RE++ +    +DM+         +  G     +    P  ++  KKE++     + K E
Sbjct: 167 HREQEAEEAAFNDMTSVQKQKLWEIGMGRTLLNDLARDPTAIKQRKKEQKN----VRKRE 214

[Close]

BLAST of CsaV3_2G009130 vs. TrEMBL
Match: tr|A0A0A0LJE9|A0A0A0LJE9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070270 PE=4 SV=1)

HSP 1 Score: 598.6 bits (1542), Expect = 8.4e-168
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0


Query: 1   MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQXXXXXXXXREISRQASKNKALKDIEEQHKK 60
           MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQXXXXXXXXREISRQASKNKALKDIEEQHKK
Sbjct: 1   MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQXXXXXXXXREISRQASKNKALKDIEEQHKK 60

Query: 61  ALEEDPSVFDYDGVYDEMKEKVVQPRAYDREERKPKYIQNLMKKAQEREREQEIIYERKL 120
           ALEEDPSVFDYDGVYDEMKEKVVQPRAYDREERKPKYIQNLMKKAQEREREQEIIYERKL
Sbjct: 61  ALEEDPSVFDYDGVYDEMKEKVVQPRAYDREERKPKYIQNLMKKAQEREREQEIIYERKL 120

Query: 121 AKERSKDDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMSDFYFS 180
           AKERSKDDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMSDFYFS
Sbjct: 121 AKERSKDDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMSDFYFS 180

Query: 181 LQKNVAYGARNAIEPTAPPKKLQLEKKEKQTEVHILEKHEESCNGDTFNDHLLQNSNLPS 240
           LQKNVAYGARNAIEPTAPPKKLQLEKKEKQTEVHILEKHEESCNGDTFNDHLLQNSNLPS
Sbjct: 181 LQKNVAYGARNAIEPTAPPKKLQLEKKEKQTEVHILEKHEESCNGDTFNDHLLQNSNLPS 240

Query: 241 CSEKTIEEHPHLEERLPFSNKTTPSNIEGTSPPTLHDKTPVQEQPKHEQSEQPPKSDHHK 300
           CSEKTIEEHPHLEERLPFSNKTTPSNIEGTSPPTLHDKTPVQEQPKHEQSEQPPKSDHHK
Sbjct: 241 CSEKTIEEHPHLEERLPFSNKTTPSNIEGTSPPTLHDKTPVQEQPKHEQSEQPPKSDHHK 300

Query: 301 RNEDAVAAAKERFLARKRAKEV 323
           RNEDAVAAAKERFLARKRAKEV
Sbjct: 301 RNEDAVAAAKERFLARKRAKEV 322

[Close]

BLAST of CsaV3_2G009130 vs. TrEMBL
Match: tr|A0A1S4E1R3|A0A1S4E1R3_CUCME (nuclear speckle splicing regulatory protein 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492150 PE=4 SV=1)

HSP 1 Score: 540.0 bits (1390), Expect = 3.5e-150
Identity = 292/322 (90.68%), Postives = 294/322 (91.30%), Query Frame = 0


Query: 1   MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQXXXXXXXXREISRQASKNKALKDIEEQHKK 60
           MSKYGLQLRVKPSQQKQP RPPLPAPLGFQ        REISRQASKNKALKDIEEQHKK
Sbjct: 1   MSKYGLQLRVKPSQQKQPKRPPLPAPLGFQDDDDDNVEREISRQASKNKALKDIEEQHKK 60

Query: 61  ALEEDPSVFDYDGVYDEMKEKVVQPRAYDREERKPKYIQNLMKKAQEREREQEIIYERKL 120
           ALEEDPSVFDYDGVYDEMKEK VQPRAYDREERKPKYIQNLMKKAQEREREQEIIYERKL
Sbjct: 61  ALEEDPSVFDYDGVYDEMKEKAVQPRAYDREERKPKYIQNLMKKAQEREREQEIIYERKL 120

Query: 121 AKERSKDDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMSDFYFS 180
           AKERSKDDHLYAGKDKFVT AYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMSDFYFS
Sbjct: 121 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMSDFYFS 180

Query: 181 LQKNVAYGARNAIEPTAPPKKLQLEKKEKQTEVHILEKHEESCNGDTFNDHLLQNSNLPS 240
           LQKNVAYGARNAIEP A PKKLQLEKKEKQTEVHILEKHEESCNGDTFNDH LQNS    
Sbjct: 181 LQKNVAYGARNAIEPRATPKKLQLEKKEKQTEVHILEKHEESCNGDTFNDHQLQNS---- 240

Query: 241 CSEKTIEEHPHLEERLPFSNKTTPSNIEGTSPPTLHDKTPVQEQPKHEQSEQPPKSDHHK 300
              KTIEEH HLEERL  SNKTTPS+IEGTSPPTLHDK  VQE+PKHE SEQPPK DHHK
Sbjct: 241 ---KTIEEHSHLEERLSASNKTTPSDIEGTSPPTLHDKALVQERPKHELSEQPPKRDHHK 300

Query: 301 RNEDAVAAAKERFLARKRAKEV 323
           RNEDAVAAAKERFLARKRAKEV
Sbjct: 301 RNEDAVAAAKERFLARKRAKEV 315

[Close]

BLAST of CsaV3_2G009130 vs. TrEMBL
Match: tr|A0A1S3BQM2|A0A1S3BQM2_CUCME (nuclear speckle splicing regulatory protein 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492150 PE=4 SV=1)

HSP 1 Score: 540.0 bits (1390), Expect = 3.5e-150
Identity = 292/322 (90.68%), Postives = 294/322 (91.30%), Query Frame = 0


Query: 1   MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQXXXXXXXXREISRQASKNKALKDIEEQHKK 60
           MSKYGLQLRVKPSQQKQP RPPLPAPLGFQ        REISRQASKNKALKDIEEQHKK
Sbjct: 13  MSKYGLQLRVKPSQQKQPKRPPLPAPLGFQDDDDDNVEREISRQASKNKALKDIEEQHKK 72

Query: 61  ALEEDPSVFDYDGVYDEMKEKVVQPRAYDREERKPKYIQNLMKKAQEREREQEIIYERKL 120
           ALEEDPSVFDYDGVYDEMKEK VQPRAYDREERKPKYIQNLMKKAQEREREQEIIYERKL
Sbjct: 73  ALEEDPSVFDYDGVYDEMKEKAVQPRAYDREERKPKYIQNLMKKAQEREREQEIIYERKL 132

Query: 121 AKERSKDDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMSDFYFS 180
           AKERSKDDHLYAGKDKFVT AYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMSDFYFS
Sbjct: 133 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMSDFYFS 192

Query: 181 LQKNVAYGARNAIEPTAPPKKLQLEKKEKQTEVHILEKHEESCNGDTFNDHLLQNSNLPS 240
           LQKNVAYGARNAIEP A PKKLQLEKKEKQTEVHILEKHEESCNGDTFNDH LQNS    
Sbjct: 193 LQKNVAYGARNAIEPRATPKKLQLEKKEKQTEVHILEKHEESCNGDTFNDHQLQNS---- 252

Query: 241 CSEKTIEEHPHLEERLPFSNKTTPSNIEGTSPPTLHDKTPVQEQPKHEQSEQPPKSDHHK 300
              KTIEEH HLEERL  SNKTTPS+IEGTSPPTLHDK  VQE+PKHE SEQPPK DHHK
Sbjct: 253 ---KTIEEHSHLEERLSASNKTTPSDIEGTSPPTLHDKALVQERPKHELSEQPPKRDHHK 312

Query: 301 RNEDAVAAAKERFLARKRAKEV 323
           RNEDAVAAAKERFLARKRAKEV
Sbjct: 313 RNEDAVAAAKERFLARKRAKEV 327

[Close]

BLAST of CsaV3_2G009130 vs. TrEMBL
Match: tr|A0A2P5BQ41|A0A2P5BQ41_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_220400 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 1.4e-85
Identity = 190/320 (59.38%), Postives = 232/320 (72.50%), Query Frame = 0


Query: 1   MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQXXXXXXXXREISRQASKNKALKDIEEQHKK 60
           MS+YGL LR  P Q+KQPTRPPLP  LGF         ++ISRQASKNK+LKDIEEQ +K
Sbjct: 1   MSRYGLNLR--PQQKKQPTRPPLPTALGFGDDDDNDVEKDISRQASKNKSLKDIEEQQRK 60

Query: 61  ALEEDPSVFDYDGVYDEMKEKVVQPRAYDREERKPKYIQNLMKKAQEREREQEIIYERKL 120
           ALEEDPS FDYDGVYDEMK K +QP+A DR+ERKPKYIQNL++KA+ R++EQEI+YERKL
Sbjct: 61  ALEEDPSAFDYDGVYDEMKAKTIQPQAQDRQERKPKYIQNLLRKAELRQKEQEIVYERKL 120

Query: 121 AKERSKDDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMSDFYFS 180
           AKERS++DHLYA KDKFVT AYKKKL EQAKWMEEERLRQLREEK+DVTKK+D+SDFYF+
Sbjct: 121 AKERSQEDHLYADKDKFVTSAYKKKLVEQAKWMEEERLRQLREEKDDVTKKTDLSDFYFN 180

Query: 181 LQKNVAYGARNAIEPTAPPKKLQLEKKEKQTEVHILEKHEESCNGDTFNDHLLQNSNLPS 240
           L KNVA+GA + IEP  P K+ +L K ++Q +    E  ++S            +SN  S
Sbjct: 181 LGKNVAFGANDVIEPRKPEKQAELRKPDRQEDTVAAEVLDKS----------RSSSNSNS 240

Query: 241 CSEKTIEEHPHLEERLPFSNKTTPSNIEGTSPPTLHDKTPVQEQPKHEQSEQPPKSDHHK 300
            SE ++    H  E       +   +++  S   + + + + E P  EQ    PKSDHHK
Sbjct: 241 ISESSVVREEHQTEASLQRRSSKSQDMKPVSNAAVAENSTI-EPPAVEQ----PKSDHHK 300

Query: 301 RNEDAVAAAKERFLARKRAK 321
           R+EDAVAAAKERFLARKRAK
Sbjct: 301 RSEDAVAAAKERFLARKRAK 303

[Close]

BLAST of CsaV3_2G009130 vs. TrEMBL
Match: tr|A0A2R6P758|A0A2R6P758_ACTCH (Nuclear speckle splicing regulatory protein like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc32076 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 4.9e-83
Identity = 193/321 (60.12%), Postives = 225/321 (70.09%), Query Frame = 0


Query: 1   MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQXXXXXXXXREISRQASKNKALKDIEEQHKK 60
           M KYGLQLR    Q++QP RPP+P PLGF+        REISRQASKNKALKDIEEQHKK
Sbjct: 1   MKKYGLQLRQPSQQKRQPGRPPIPNPLGFRDEDEDDVEREISRQASKNKALKDIEEQHKK 60

Query: 61  ALEEDPSVFDYDGVYDEMKEKVVQPRAYDREERKPKYIQNLMKKAQEREREQEIIYERKL 120
           ALEEDPSVFDYDGVYDEMKEK V+P A+DR+ERKPKYIQ L+ KA++RERE EIIYERKL
Sbjct: 61  ALEEDPSVFDYDGVYDEMKEKAVRPLAHDRQERKPKYIQALIDKAKQREREHEIIYERKL 120

Query: 121 AKERSKDDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMSDFYFS 180
            KERSKDDHLYA KDKFVT AYKKKLAEQA+WMEEER+RQLREEK+DVTKK+D++DFYF+
Sbjct: 121 VKERSKDDHLYAEKDKFVTSAYKKKLAEQAQWMEEERIRQLREEKDDVTKKNDITDFYFN 180

Query: 181 LQKNVAYGARNAIEPTAPPKKLQLEKKEKQTEVHILEKHEESCNGDTFNDHLLQNSNLPS 240
           L KNVA+GA+ A        +  ++++++ T +   EK              LQ +  P 
Sbjct: 181 LSKNVAFGAQEA------EARKSIKQQKEATAITSEEK--------------LQLTESPL 240

Query: 241 CSEKTIEEHPHLEERLPFSNKTTPSNIEGTSPPTLHDKTPVQEQPKHEQSEQPPKSDHHK 300
            S    E H      LP   +    ++     P    K  V EQP  EQ    PK DHHK
Sbjct: 241 ESPNLRERHQGEPSSLP---EERSESVYAKPAPDASTKV-VAEQPSAEQ----PKRDHHK 293

Query: 301 RNEDAVAAAKERFLARKRAKE 322
           RNEDAVAAAKERF+ARKRAKE
Sbjct: 301 RNEDAVAAAKERFMARKRAKE 293

The following BLAST results are available for this feature:

BLAST of CsaV3_2G009130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152856.1	1.3e-167	100.00	PREDICTED: nuclear speckle splicing regulatory protein 1-like [Cucumis sativus] ...	[more]
XP_008450616.1	5.4e-150	90.68	PREDICTED: nuclear speckle splicing regulatory protein 1-like isoform X1 [Cucumi...	[more]
XP_016902161.1	5.4e-150	90.68	PREDICTED: nuclear speckle splicing regulatory protein 1-like isoform X2 [Cucumi...	[more]
XP_023520694.1	2.8e-130	82.35	nuclear speckle splicing regulatory protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022927406.1	4.7e-130	82.04	nuclear speckle splicing regulatory protein 1-like [Cucurbita moschata] >XP_0229...	[more]

BLAST of CsaV3_2G009130 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G27285.1	3.2e-64	50.62	Coiled-coil domain-containing protein 55 (DUF2040)	[more]
AT1G55928.1	3.3e-45	42.47	Coiled-coil domain-containing protein 55 (DUF2040)	[more]
AT2G27280.1	1.3e-41	38.82	Coiled-coil domain-containing protein 55 (DUF2040)	[more]

BLAST of CsaV3_2G009130 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q2KIC0\|NSRP1_BOVIN	1.1e-13	34.24	Nuclear speckle splicing regulatory protein 1 OS=Bos taurus OX=9913 GN=NSRP1 PE=...	[more]
sp\|Q9H0G5\|NSRP1_HUMAN	4.2e-13	33.71	Nuclear speckle splicing regulatory protein 1 OS=Homo sapiens OX=9606 GN=NSRP1 P...	[more]
sp\|Q5NCR9\|NSRP1_MOUSE	2.3e-11	28.52	Nuclear speckle splicing regulatory protein 1 OS=Mus musculus OX=10090 GN=Nsrp1 ...	[more]
sp\|Q4FZU3\|NSRP1_RAT	3.0e-11	29.44	Nuclear speckle splicing regulatory protein 1 OS=Rattus norvegicus OX=10116 GN=N...	[more]
sp\|Q09252\|NSRP1_CAEEL	3.7e-09	30.77	Nuclear speckle splicing regulatory protein 1 homolog OS=Caenorhabditis elegans ...	[more]

BLAST of CsaV3_2G009130 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LJE9\|A0A0A0LJE9_CUCSA	8.4e-168	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070270 PE=4 SV=1	[more]
tr\|A0A1S4E1R3\|A0A1S4E1R3_CUCME	3.5e-150	90.68	nuclear speckle splicing regulatory protein 1-like isoform X2 OS=Cucumis melo OX...	[more]
tr\|A0A1S3BQM2\|A0A1S3BQM2_CUCME	3.5e-150	90.68	nuclear speckle splicing regulatory protein 1-like isoform X1 OS=Cucumis melo OX...	[more]
tr\|A0A2P5BQ41\|A0A2P5BQ41_PARAD	1.4e-85	59.38	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_220400 PE...	[more]
tr\|A0A2R6P758\|A0A2R6P758_ACTCH	4.9e-83	60.12	Nuclear speckle splicing regulatory protein like OS=Actinidia chinensis var. chi...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR018612	DUF2040

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G009130.1	CsaV3_2G009130.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 144..171
None	No IPR available	COILS	Coil	Coil	coord: 44..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 200..226
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 190..322
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 227..243
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 280..322
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 258..278
None	No IPR available	PANTHER	PTHR30060	INNER MEMBRANE PROTEIN	coord: 2..321
None	No IPR available	PANTHER	PTHR30060:SF0	COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED	coord: 2..321
IPR018612	Domain of unknown function DUF2040	PFAM	PF09745	DUF2040	coord: 55..171 e-value: 7.6E-39 score: 132.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_2G009130	CSPI02G06720	Wild cucumber (PI 183967)	cpicucB080
CsaV3_2G009130	Cucsa.178970	Cucumber (Gy14) v1	cgycucB287
CsaV3_2G009130	MELO3C003924	Melon (DHL92) v3.5.1	cucmeB141
CsaV3_2G009130	MELO3C003924.2	Melon (DHL92) v3.6.1	cucmedB134

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_2G009130	Silver-seed gourd	carcucB0005
CsaV3_2G009130	Silver-seed gourd	carcucB0191
CsaV3_2G009130	Cucumber (Gy14) v2	cgybcucB064
CsaV3_2G009130	Cucurbita maxima (Rimu)	cmacucB0193
CsaV3_2G009130	Cucurbita maxima (Rimu)	cmacucB0928
CsaV3_2G009130	Cucurbita moschata (Rifu)	cmocucB0177
CsaV3_2G009130	Cucurbita moschata (Rifu)	cmocucB0920
CsaV3_2G009130	Cucurbita pepo (Zucchini)	cpecucB0108
CsaV3_2G009130	Cucurbita pepo (Zucchini)	cpecucB1005
CsaV3_2G009130	Bottle gourd (USVL1VR-Ls)	cuclsiB108
CsaV3_2G009130	Watermelon (Charleston Gray)	cucwcgB119
CsaV3_2G009130	Watermelon (97103) v1	cucwmB175
CsaV3_2G009130	Watermelon (97103) v2	cucwmbB114
CsaV3_2G009130	Wax gourd	cucwgoB140