CsaV3_2G002400 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G002400
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionHeavy metal transport/detoxification superfamily protein
Locationchr2 : 990974 .. 994103 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGCAGGGAAAGAGAGCTTTGGGAATGGGAAAACTGGTGATGAGCATTGGGAAAGTATTTTCATGTTTCATAAATACAACAGATTCTTCCACTTCCTGCAACTTATACAGATTGGAAATTGAAGACAGTAATAATTTTGATCAGAAACAGCCATTAATGCCCAAACAAACGACATCAACAACTCATGATCTTCTCGGATTCAAGGATGTGATTACTCATCAAAACGAAACTCTCCCTCTTCAGTTCAACCCCAAGGTCAGATCACATTCCTAACCCCCTTTTCTCCCTCCTCAATCTGCTTCTACTATTGACTCTTGGTTTTTAAACTTTAAATAATGGTTCTTTTTATTTTCTTTTAATCTTTTTCCTTTTTTTGTTCCATGTTATGTAATTTAATTTCGGTTTCTTTAACTTCAACTTTGATTTTTTTTTTTTTTTGTCAATGTTTTTATTTTTTTCTATATGTTTAGTTCAGTTTGGTTTCTTTTCATGATGAAGATAGTAACTTTTTTAGATACCAAAATCATAATACGGAAGGTATAGTATACAGTTAGGTAACTCGAGTTTTCCTCGACTCTATACTATATATATACTATACAAGTACTATAATTAGCTAGCTTAACAATAAAAGAAATCATGAATTTGTTGCTTCATATAGACAAAAGTGAACCAATAAAAAAATAAAATAGTCGAAATAGACAAAAAGAACACAAAAACTAAAAGTATGAAGATCTAAATATTACTTTCATTTTTATATTTGGAAGTAATTACTTGTACTTGGACTTTCAATTCTCAAAATAAGTTAGATTCTATTTTTTGTGAGAAAAATTTATTAAGTTTGATTCAAATACATTCGCATGGATAACAAAAATTACAAAATTAAAACTTATTTTACATGTAGAAAACTTAATGAACCATTGAGAATTTAATAAGTTTTTGTTAGACTTATAAACATATATACTTTTTTATTTAAAAATGCAAAAAAAAAAAAGAAAAAGAACTTTGATGTTATCTATAAAATTTATTGAAAAATGTAAAACTAAAATTAAATGAGTATTAAATACAAGAACCACAATTAATTGCCTAAAAGAAAACAATTAGTTTAAATGCTTAGTTTGTCTTTGTTGTGTTTTAAATTAAAAATGTATATTCGTACGGAATAATTGGAGAAGAGTGAGTGAAAACTGGAAACAATTTCGGTAAGCTAAATAAGATTCCTATGCTATGTTTATCGTTTTCTATAATTTAAATTTTAGTGTACATTTGACCTATTGAATGAGGCAAAGAATGTAGATATTACATTCAAGTTAGTATTTTGAGGTAAAGTAGTAAGATTGAATTTCATGATAATTATAAAAAGTAAATTTTAAAAACTCGATTGAGTTACTTAATAAGTGAACACGTAAATTCACCTGTTTATTCAATTTATTTATATTAAAAAAGAATATCGATTAACTAAATTTAAAATTTATTAAAAATACAAAAACAAATTAATAAACTTCAAACTACATGAATCAATATGATATATTAACCTAAAAGTTGAGTTACTTTATAAATATGTTACATTTACTATCGAAGTTGAGTTGTTTATAGACAACGGTAACTTAAAACGTGATTAGCTTAAAACTTGATTTTTCCATAAAGTCTAAAAGAACAGTAAAACTTCACGTACCAACGTCTTTAAATTATATACGTTCAAATTTTATTATTTTTAAATTAAATAAAATCGCGTAGTAAATTGTACATTTTCATAAAAATTAAAGAAATTAATGTATATATATTATTTTGGATAATTGATTAGGTGGATTCTATAATGCATTTATCTACATGTATTCTTTTTTTTTTTTTTTTTTTGTATGTAATGAGTAGATGGTAAAACACATAAATAGATGTATACGAGATGCATTGTTGAAGCTTTTTCTTTTGGATTACCGCTCTGGGTTGTAAACAACCCGAGATTTTTCAGGTGGTGGTGGTGAGGGTGTCAATGCATTGCAATGGCTGTGCTAGAAGAGTTGAGAAACATATATCCAAGATACAAGGTATTTTTTTTTAATAGTAATTATTATTATTACAAGGGAAATTGTAAAAAATGACAAAATGTAAATAGTTTGTATTTTTTAAAATTTATTAAAAAATGCAAAACGTTGATGTAAATTTTATGAATAGTAATTAAGAATGTAATAACATTTTACAAAAGTTGTAAATATAACAAAATTTATCGATGATAGATTCTGATAGACCAATATTTACCACATAGTCGACTTTGACCAATTTTGTTATATTTGTAATTTTTTAAAAATATTTTACATATTTAATTATTTTGAATCTAATAGCTATATTTTGTAATAAAACGATTTTTTTTAAACTGTGTCCAGTACAATTTGATGGTTTTGAAATTTGGTTCAAATCCCCACATATATTGTTTCTACATCCCAATTTCGTTAATAAAACAGTCCATGAACTAAAAGATTTGTACAGCACCCATCAAACATGCTTAATCATCTAATAATGTTTTACGTAAATAACTATGTATATTTAATATCGTATTTACTAATAAAGTATGGAGATTGTATTAGATGGCAGAAAAACAAAAGTCACAAAAATAAAAAATCAAACTTATAGTACTTTTTTGTATATTACAAATTTGACATATTTTTAAATTTGTCATTTAAAAAATGTAGATGATGTGGACCATGTTATCATATTTTTTTTTGTTATTTTTGTAAACTCGCCAATAAAGTAGTTATCAAAATAAAATTTAAATCTAGGTTGTTTGTCTTATAATACTTGCTTTTAGGCGTGGAATCATGGAAGGTAGATATGGAAAGAGAGACTGTGGTTGTTACGGGAGATGTTTTTCCTTTTGAAGTTATGCAATGTATTTCTAAAGTGAAGAGTGTAGAGATTTTGGAGCCTCAGGTTTGATCTGGAAGTATTTTTGCAAATTCAACAACATTTGGATTCAACTTGACAACTGGGTTCAACTTGACAACGAATTCATTTTTTTTTCTTCTAATGCAAGAAGTAGTTGAAAAAAAAAATCAAAAGTCCTATCATGATCTACAAGTTTATTAATCGTTCGAGAATTTAGAGTCTTACATTTATGATCGAAATGCCTAGTTTTGCCA

mRNA sequence

ATGGGAAAACTGGTGATGAGCATTGGGAAAGTATTTTCATGTTTCATAAATACAACAGATTCTTCCACTTCCTGCAACTTATACAGATTGGAAATTGAAGACAGTAATAATTTTGATCAGAAACAGCCATTAATGCCCAAACAAACGACATCAACAACTCATGATCTTCTCGGATTCAAGGATGTGATTACTCATCAAAACGAAACTCTCCCTCTTCAGTTCAACCCCAAGGTGGTGGTGGTGAGGGTGTCAATGCATTGCAATGGCTGTGCTAGAAGAGTTGAGAAACATATATCCAAGATACAAGGCGTGGAATCATGGAAGGTAGATATGGAAAGAGAGACTGTGGTTGTTACGGGAGATGTTTTTCCTTTTGAAGTTATGCAATGTATTTCTAAAGTGAAGAGTGTAGAGATTTTGGAGCCTCAGGTTTGA

Coding sequence (CDS)

ATGGGAAAACTGGTGATGAGCATTGGGAAAGTATTTTCATGTTTCATAAATACAACAGATTCTTCCACTTCCTGCAACTTATACAGATTGGAAATTGAAGACAGTAATAATTTTGATCAGAAACAGCCATTAATGCCCAAACAAACGACATCAACAACTCATGATCTTCTCGGATTCAAGGATGTGATTACTCATCAAAACGAAACTCTCCCTCTTCAGTTCAACCCCAAGGTGGTGGTGGTGAGGGTGTCAATGCATTGCAATGGCTGTGCTAGAAGAGTTGAGAAACATATATCCAAGATACAAGGCGTGGAATCATGGAAGGTAGATATGGAAAGAGAGACTGTGGTTGTTACGGGAGATGTTTTTCCTTTTGAAGTTATGCAATGTATTTCTAAAGTGAAGAGTGTAGAGATTTTGGAGCCTCAGGTTTGA

Protein sequence

MGKLVMSIGKVFSCFINTTDSSTSCNLYRLEIEDSNNFDQKQPLMPKQTTSTTHDLLGFKDVITHQNETLPLQFNPKVVVVRVSMHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVEILEPQV
Homology
[Close]
BLAST of CsaV3_2G002400 vs. NCBI nr
Match: XP_008458177.1 (PREDICTED: uncharacterized protein LOC103497691 [Cucumis melo])

HSP 1 Score: 258.5 bits (659), Expect = 1.4e-65
Identity = 133/145 (91.72%), Postives = 137/145 (94.48%), Query Frame = 0 

Query: 1   MGKLVMSIGKVFSCFINTTD-SSTSCNLYRLEIEDSNNFDQKQPLMPKQTTSTTHDLLGF 60
           MGKLV+SIGKVFSCFINTTD SSTSC LYR EIEDSNNFDQKQPLM KQTTSTTHDLLGF
Sbjct: 1   MGKLVLSIGKVFSCFINTTDSSSTSCCLYRFEIEDSNNFDQKQPLMAKQTTSTTHDLLGF 60

Query: 61  KDVITHQNETL-PLQFNPKVVVVRVSMHCNGCARRVEKHISKIQGVESWKVDMERETVVV 120
           KDVITHQN+TL PLQFNPKVV+VRVSMHCNGCARRVEK ISKIQGVESWKVDMERE VVV
Sbjct: 61  KDVITHQNKTLRPLQFNPKVVMVRVSMHCNGCARRVEKLISKIQGVESWKVDMERERVVV 120

Query: 121 TGDVFPFEVMQCISKVKSVEILEPQ 144
           TGDVFPFEVM+CISKVKSVEILE Q
Sbjct: 121 TGDVFPFEVMECISKVKSVEILESQ 145

[Close]
BLAST of CsaV3_2G002400 vs. NCBI nr
Match: KGN60632.1 (hypothetical protein Csa_2G005290 [Cucumis sativus])

HSP 1 Score: 159.5 bits (402), Expect = 8.8e-36
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0 

Query: 1  MGKLVMSIGKVFSCFINTTDSSTSCNLYRLEIEDSNNFDQKQPLMPKQTTSTTHDLLGFK 60
          MGKLVMSIGKVFSCFINTTDSSTSCNLYRLEIEDSNNFDQKQPLMPKQTTSTTHDLLGFK
Sbjct: 1  MGKLVMSIGKVFSCFINTTDSSTSCNLYRLEIEDSNNFDQKQPLMPKQTTSTTHDLLGFK 60

Query: 61 DVITHQNETLPLQFNPK 78
          DVITHQNETLPLQFNPK
Sbjct: 61 DVITHQNETLPLQFNPK 77

[Close]
BLAST of CsaV3_2G002400 vs. NCBI nr
Match: XP_022946348.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 156.0 bits (393), Expect = 9.8e-35
Identity = 89/143 (62.24%), Postives = 108/143 (75.52%), Query Frame = 0 

Query: 1   MGKLVMSIGKVFSCFINTTDSSTSCNLYRLEIEDSNNFDQKQPLMPKQTTSTTHDLLGFK 60
           MGK V  IGKVFSCF+N + +S+SC  +++E      F+ KQPLMP Q  S    LL   
Sbjct: 1   MGKAV-GIGKVFSCFMN-SGASSSC--FQIEA----TFEPKQPLMPNQPNS---HLLRLN 60

Query: 61  DVITHQNETLPLQFNPKVVVVRVSMHCNGCARRVEKHISKIQGVESWKVDMERETVVVTG 120
           DVI+H N+    Q NPKVV +RVSMHCNGCARRVEK+I KI+GV+S+KVD ER+TVVVTG
Sbjct: 61  DVISHTNQ----QANPKVVELRVSMHCNGCARRVEKNIGKIEGVDSYKVDFERKTVVVTG 120

Query: 121 DVFPFEVMQCISKVKSVEILEPQ 144
           DV  FEV+QC+SKV+SVEILEPQ
Sbjct: 121 DVSSFEVIQCVSKVRSVEILEPQ 128

[Close]
BLAST of CsaV3_2G002400 vs. NCBI nr
Match: XP_022999545.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 155.6 bits (392), Expect = 1.3e-34
Identity = 91/143 (63.64%), Postives = 107/143 (74.83%), Query Frame = 0 

Query: 1   MGKLVMSIGKVFSCFINTTDSSTSCNLYRLEIEDSNNFDQKQPLMPKQTTSTTHDLLGFK 60
           MGK V  IGKVFSCF+N+  +S+SC     EIE    F+ KQPLMP Q  S    LL F 
Sbjct: 1   MGKAV-GIGKVFSCFMNSR-ASSSC----FEIE--GTFEPKQPLMPNQPNS---HLLRFN 60

Query: 61  DVITHQNETLPLQFNPKVVVVRVSMHCNGCARRVEKHISKIQGVESWKVDMERETVVVTG 120
           DVI+H N+    Q NPKVV +RVSMHCNGCARRVEK+I KI+GV+S+KVD ER+TVVVTG
Sbjct: 61  DVISHTNQ----QTNPKVVELRVSMHCNGCARRVEKNIGKIEGVDSFKVDFERKTVVVTG 120

Query: 121 DVFPFEVMQCISKVKSVEILEPQ 144
           DV  FEV+QC+SKV+SVEILE Q
Sbjct: 121 DVSSFEVIQCVSKVRSVEILEHQ 128

[Close]
BLAST of CsaV3_2G002400 vs. NCBI nr
Match: KGN60633.1 (hypothetical protein Csa_2G005300 [Cucumis sativus])

HSP 1 Score: 125.9 bits (315), Expect = 1.1e-25
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0 

Query: 85  MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVEILEPQV 144
           MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVEILEPQV
Sbjct: 1   MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVEILEPQV 60

[Close]
BLAST of CsaV3_2G002400 vs. TAIR10
Match: AT3G24450.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 95.9 bits (237), Expect = 2.2e-20
Identity = 54/141 (38.30%), Postives = 87/141 (61.70%), Query Frame = 0 

Query: 1   MGKLVMSIGKVFSCFINTTDSSTSCNLYRLE-IEDSNNFDQKQPLMPKQTTSTTHDLLGF 60
           MGKL   IG+V+ C    T+    C+ + L  + D     +K+PL+   +T  +  ++  
Sbjct: 1   MGKL-QKIGRVWDCLFLPTN---QCSCFCLNTLGDEEEEFEKEPLI-DSSTEKSGKVMRL 60

Query: 61  KDVI-THQNETLPLQFNPKVVVVRVSMHCNGCARRVEKHISKIQGVESWKVDMERETVVV 120
           KDV+     +TL     PK+V ++VSMHC GCA++VEKHISK+ GV  +KV++E + VVV
Sbjct: 61  KDVVAADHRQTLAFHLKPKIVELKVSMHCYGCAKKVEKHISKLDGVTWYKVELESKKVVV 120

Query: 121 TGDVFPFEVMQCISKVKSVEI 140
            G++ P +V++ I KVK+ ++
Sbjct: 121 KGNILPVDVLESICKVKNAQL 136

[Close]
BLAST of CsaV3_2G002400 vs. TAIR10
Match: AT2G37390.1 (Chloroplast-targeted copper chaperone protein)

HSP 1 Score: 71.2 bits (173), Expect = 5.7e-13
Identity = 29/62 (46.77%), Postives = 46/62 (74.19%), Query Frame = 0 

Query: 77  KVVVVRVSMHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKS 136
           +VVV++VS+HC GC  +V KH++++QGV S+ +D   + V VTGD+ P E++  ISKVK+
Sbjct: 181 QVVVLKVSLHCRGCEGKVRKHLARMQGVTSFNIDFAAKKVTVTGDITPLEILDSISKVKN 240

Query: 137 VE 139
            +
Sbjct: 241 AQ 242

[Close]
BLAST of CsaV3_2G002400 vs. TAIR10
Match: AT5G02600.2 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 68.9 bits (167), Expect = 2.9e-12
Identity = 30/57 (52.63%), Postives = 42/57 (73.68%), Query Frame = 0 

Query: 82  RVSMHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVE 139
           RVS+HC GCA +V+KH+SK++GV S+ +D   + V VTGDV P  V+  ISKVK+ +
Sbjct: 255 RVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLTVLASISKVKNAQ 311

[Close]
BLAST of CsaV3_2G002400 vs. TAIR10
Match: AT2G28660.1 (Chloroplast-targeted copper chaperone protein)

HSP 1 Score: 65.9 bits (159), Expect = 2.4e-11
Identity = 29/63 (46.03%), Postives = 45/63 (71.43%), Query Frame = 0 

Query: 77  KVVVVRVSMHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKS 136
           +VVV+RVS+HC GC  +V KHISK++GV S+ +D+  + V V G + P  +++ ISKVK 
Sbjct: 183 QVVVLRVSIHCKGCEGKVRKHISKMEGVTSYTIDLATKKVTVVGKITPVGLVESISKVKF 242

Query: 137 VEI 140
            ++
Sbjct: 243 AQL 245

[Close]
BLAST of CsaV3_2G002400 vs. TAIR10
Match: AT3G53530.2 (Chloroplast-targeted copper chaperone protein)

HSP 1 Score: 65.1 bits (157), Expect = 4.1e-11
Identity = 31/65 (47.69%), Postives = 46/65 (70.77%), Query Frame = 0 

Query: 81  VRVSMHCN--GCARRVEKHISKIQ-GVESWKVDMERETVVVTGDVFPFEVMQCISKVKSV 140
           +RVS+HC+  GC  +V+KH+SK+Q GV S+ +D   + V VTGD+ P EV+ C+SKVK+ 
Sbjct: 172 LRVSLHCHCRGCQGKVKKHLSKMQVGVTSFNIDFASKKVTVTGDITPLEVLGCLSKVKNA 231

Query: 141 EILEP 143
           +   P
Sbjct: 232 QFWTP 236

[Close]
BLAST of CsaV3_2G002400 vs. Swiss-Prot
Match: sp|Q58FZ0|NAKR2_ARATH (Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis thaliana OX=3702 GN=NAKR2 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.0e-11
Identity = 29/62 (46.77%), Postives = 46/62 (74.19%), Query Frame = 0 

Query: 77  KVVVVRVSMHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKS 136
           +VVV++VS+HC GC  +V KH++++QGV S+ +D   + V VTGD+ P E++  ISKVK+
Sbjct: 181 QVVVLKVSLHCRGCEGKVRKHLARMQGVTSFNIDFAAKKVTVTGDITPLEILDSISKVKN 240

Query: 137 VE 139
            +
Sbjct: 241 AQ 242

[Close]
BLAST of CsaV3_2G002400 vs. Swiss-Prot
Match: sp|Q8RXH8|NAKR3_ARATH (Protein SODIUM POTASSIUM ROOT DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=NAKR3 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.0e-11
Identity = 31/64 (48.44%), Postives = 46/64 (71.88%), Query Frame = 0 

Query: 81  VRVSMHCN--GCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVE 140
           +RVS+HC+  GC  +V+KH+SK+QGV S+ +D   + V VTGD+ P EV+ C+SKVK+ +
Sbjct: 172 LRVSLHCHCRGCQGKVKKHLSKMQGVTSFNIDFASKKVTVTGDITPLEVLGCLSKVKNAQ 231

Query: 141 ILEP 143
              P
Sbjct: 232 FWTP 235

[Close]
BLAST of CsaV3_2G002400 vs. Swiss-Prot
Match: sp|Q8LDS4|NAKR1_ARATH (Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=NAKR1 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.1e-11
Identity = 30/57 (52.63%), Postives = 42/57 (73.68%), Query Frame = 0 

Query: 82  RVSMHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVE 139
           RVS+HC GCA +V+KH+SK++GV S+ +D   + V VTGDV P  V+  ISKVK+ +
Sbjct: 255 RVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLTVLASISKVKNAQ 311

[Close]
BLAST of CsaV3_2G002400 vs. Swiss-Prot
Match: sp|Q0WV37|HIP34_ARATH (Heavy metal-associated isoprenylated plant protein 34 OS=Arabidopsis thaliana OX=3702 GN=HIPP34 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.3e-06
Identity = 27/62 (43.55%), Postives = 43/62 (69.35%), Query Frame = 0 

Query: 80  VVRVSMHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKV-KSVE 139
           V++V++HC GC  +V+K + KI+GV S K D+E+  V VTG++ P  +++ +SK  K  E
Sbjct: 13  VLKVNVHCEGCKHKVKKQLQKIEGVYSVKADVEQGRVTVTGNIDPALLVKKLSKSGKHAE 72

Query: 140 IL 141
           IL
Sbjct: 73  IL 74

[Close]
BLAST of CsaV3_2G002400 vs. Swiss-Prot
Match: sp|Q94BT9|ATOX1_ARATH (Copper transport protein ATX1 OS=Arabidopsis thaliana OX=3702 GN=ATX1 PE=1 SV=2)

HSP 1 Score: 53.5 bits (127), Expect = 2.2e-06
Identity = 24/57 (42.11%), Postives = 40/57 (70.18%), Query Frame = 0 

Query: 77  KVVVVRVSMHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISK 134
           + VV+RV+M C GC   V++ + K++GVES+ VD++ + V V G+V P  V+Q ++K
Sbjct: 3   QTVVLRVAMTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVTK 59

[Close]
BLAST of CsaV3_2G002400 vs. TrEMBL
Match: tr|A0A1S3C8H9|A0A1S3C8H9_CUCME (uncharacterized protein LOC103497691 OS=Cucumis melo OX=3656 GN=LOC103497691 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 9.3e-66
Identity = 133/145 (91.72%), Postives = 137/145 (94.48%), Query Frame = 0 

Query: 1   MGKLVMSIGKVFSCFINTTD-SSTSCNLYRLEIEDSNNFDQKQPLMPKQTTSTTHDLLGF 60
           MGKLV+SIGKVFSCFINTTD SSTSC LYR EIEDSNNFDQKQPLM KQTTSTTHDLLGF
Sbjct: 1   MGKLVLSIGKVFSCFINTTDSSSTSCCLYRFEIEDSNNFDQKQPLMAKQTTSTTHDLLGF 60

Query: 61  KDVITHQNETL-PLQFNPKVVVVRVSMHCNGCARRVEKHISKIQGVESWKVDMERETVVV 120
           KDVITHQN+TL PLQFNPKVV+VRVSMHCNGCARRVEK ISKIQGVESWKVDMERE VVV
Sbjct: 61  KDVITHQNKTLRPLQFNPKVVMVRVSMHCNGCARRVEKLISKIQGVESWKVDMERERVVV 120

Query: 121 TGDVFPFEVMQCISKVKSVEILEPQ 144
           TGDVFPFEVM+CISKVKSVEILE Q
Sbjct: 121 TGDVFPFEVMECISKVKSVEILESQ 145

[Close]
BLAST of CsaV3_2G002400 vs. TrEMBL
Match: tr|A0A0A0LIU8|A0A0A0LIU8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G005290 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 5.8e-36
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0 

Query: 1  MGKLVMSIGKVFSCFINTTDSSTSCNLYRLEIEDSNNFDQKQPLMPKQTTSTTHDLLGFK 60
          MGKLVMSIGKVFSCFINTTDSSTSCNLYRLEIEDSNNFDQKQPLMPKQTTSTTHDLLGFK
Sbjct: 1  MGKLVMSIGKVFSCFINTTDSSTSCNLYRLEIEDSNNFDQKQPLMPKQTTSTTHDLLGFK 60

Query: 61 DVITHQNETLPLQFNPK 78
          DVITHQNETLPLQFNPK
Sbjct: 61 DVITHQNETLPLQFNPK 77

[Close]
BLAST of CsaV3_2G002400 vs. TrEMBL
Match: tr|A0A0A0LFW6|A0A0A0LFW6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G005300 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 7.2e-26
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0 

Query: 85  MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVEILEPQV 144
           MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVEILEPQV
Sbjct: 1   MHCNGCARRVEKHISKIQGVESWKVDMERETVVVTGDVFPFEVMQCISKVKSVEILEPQV 60

[Close]
BLAST of CsaV3_2G002400 vs. TrEMBL
Match: tr|A0A2K1WX89|A0A2K1WX89_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_018G072000v3 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 9.4e-26
Identity = 69/140 (49.29%), Postives = 98/140 (70.00%), Query Frame = 0 

Query: 1   MGKLVMSIGKVFSCFINTTDSSTSCNLYRLEIEDSNNFD-QKQPLMPKQTTSTTHDLLGF 60
           MGKL  S+GKV  C   TT  S SC+ + +   DS + D +K+PL+P    S    L+  
Sbjct: 1   MGKL--SLGKVLDCLCFTTPGS-SCSCFCINSLDSQDDDFEKKPLIP----SDKGRLVRL 60

Query: 61  KDVITHQNETLPLQFNPKVVVVRVSMHCNGCARRVEKHISKIQGVESWKVDMERETVVVT 120
           KDV+   N+TL  Q  PK+VV+RVSMHCNGCAR+V+KH+S+++GV S+KVD+E + VVV 
Sbjct: 61  KDVVA-DNQTLAFQLKPKMVVLRVSMHCNGCARKVKKHVSQMEGVSSYKVDLESKMVVVI 120

Query: 121 GDVFPFEVMQCISKVKSVEI 140
           GD+ PFEV++ +S+VK+ E+
Sbjct: 121 GDIIPFEVLESVSRVKNAEL 132

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BLAST of CsaV3_2G002400 vs. TrEMBL
Match: tr|A0A2K1WXG1|A0A2K1WXG1_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_018G076400v3 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.6e-25
Identity = 69/140 (49.29%), Postives = 97/140 (69.29%), Query Frame = 0 

Query: 1   MGKLVMSIGKVFSCFINTTDSSTSCNLYRLEIEDSNNFD-QKQPLMPKQTTSTTHDLLGF 60
           MGKL  S+GKV  C   TT  S SC+ + +   DS +   +K+PL+P    S    L+  
Sbjct: 1   MGKL--SLGKVLDCLCFTTPGS-SCSCFCINSLDSQDDGFEKKPLIP----SDKGRLMRL 60

Query: 61  KDVITHQNETLPLQFNPKVVVVRVSMHCNGCARRVEKHISKIQGVESWKVDMERETVVVT 120
           KDV+   N+TL  Q  PK+VV+RVSMHCNGCAR+V+KH+SK++GV S+KVD+E + VVV 
Sbjct: 61  KDVVA-DNQTLAFQLKPKMVVLRVSMHCNGCARKVKKHVSKMEGVSSYKVDLESKMVVVI 120

Query: 121 GDVFPFEVMQCISKVKSVEI 140
           GD+ PFEV++ +S+VK+ E+
Sbjct: 121 GDIIPFEVLESVSRVKNAEL 132

The following BLAST results are available for this feature:
BLAST of CsaV3_2G002400 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008458177.11.4e-6591.72PREDICTED: uncharacterized protein LOC103497691 [Cucumis melo][more]
KGN60632.18.8e-36100.00hypothetical protein Csa_2G005290 [Cucumis sativus][more]
XP_022946348.19.8e-3562.24protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 [Cucurbita moschata][more]
XP_022999545.11.3e-3463.64protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 [Cucurbita maxima][more]
KGN60633.11.1e-25100.00hypothetical protein Csa_2G005300 [Cucumis sativus][more]
BLAST of CsaV3_2G002400 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G24450.12.2e-2038.30Heavy metal transport/detoxification superfamily protein [more]
AT2G37390.15.7e-1346.77Chloroplast-targeted copper chaperone protein[more]
AT5G02600.22.9e-1252.63Heavy metal transport/detoxification superfamily protein [more]
AT2G28660.12.4e-1146.03Chloroplast-targeted copper chaperone protein[more]
AT3G53530.24.1e-1147.69Chloroplast-targeted copper chaperone protein[more]
BLAST of CsaV3_2G002400 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q58FZ0|NAKR2_ARATH1.0e-1146.77Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis thaliana OX=3702 GN=NAK... [more]
sp|Q8RXH8|NAKR3_ARATH3.0e-1148.44Protein SODIUM POTASSIUM ROOT DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=NAK... [more]
sp|Q8LDS4|NAKR1_ARATH5.1e-1152.63Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=NAK... [more]
sp|Q0WV37|HIP34_ARATH1.3e-0643.55Heavy metal-associated isoprenylated plant protein 34 OS=Arabidopsis thaliana OX... [more]
sp|Q94BT9|ATOX1_ARATH2.2e-0642.11Copper transport protein ATX1 OS=Arabidopsis thaliana OX=3702 GN=ATX1 PE=1 SV=2[more]
BLAST of CsaV3_2G002400 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C8H9|A0A1S3C8H9_CUCME9.3e-6691.72uncharacterized protein LOC103497691 OS=Cucumis melo OX=3656 GN=LOC103497691 PE=... [more]
tr|A0A0A0LIU8|A0A0A0LIU8_CUCSA5.8e-36100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G005290 PE=4 SV=1[more]
tr|A0A0A0LFW6|A0A0A0LFW6_CUCSA7.2e-26100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G005300 PE=4 SV=1[more]
tr|A0A2K1WX89|A0A2K1WX89_POPTR9.4e-2649.29Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_018G072000v3 PE=... [more]
tr|A0A2K1WXG1|A0A2K1WXG1_POPTR1.6e-2549.29Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_018G076400v3 PE=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Vocabulary: Biological Process
TermDefinition
GO:0030001metal ion transport
Vocabulary: INTERPRO
TermDefinition
IPR036163HMA_dom_sf
IPR006121HMA_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030001 metal ion transport
biological_process GO:0008150 biological_process
biological_process GO:0046916 cellular transition metal ion homeostasis
cellular_component GO:0005575 cellular_component
cellular_component GO:0005737 cytoplasm
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003674 molecular_function
molecular_function GO:0046914 transition metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G002400.1CsaV3_2G002400.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006121Heavy metal-associated domain, HMAPFAMPF00403HMAcoord: 80..124
e-value: 3.7E-13
score: 49.6
IPR006121Heavy metal-associated domain, HMAPROSITEPS50846HMA_2coord: 77..144
score: 11.944
IPR006121Heavy metal-associated domain, HMACDDcd00371HMAcoord: 85..122
e-value: 7.05273E-11
score: 53.3785
NoneNo IPR availableGENE3DG3DSA:3.30.70.100coord: 75..139
e-value: 5.7E-16
score: 60.6
NoneNo IPR availablePANTHERPTHR22814:SF101HEAVY METAL TRANSPORT/DETOXIFICATION DOMAIN-CONTAINING PROTEINcoord: 6..141
NoneNo IPR availablePANTHERPTHR22814COPPER TRANSPORT PROTEIN ATOX1-RELATEDcoord: 6..141
IPR036163Heavy metal-associated domain superfamilySUPERFAMILYSSF55008HMA, heavy metal-associated domaincoord: 77..134

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_2G002400CSPI02G01290Wild cucumber (PI 183967)cpicucB080
CsaV3_2G002400CSPI01G19440Wild cucumber (PI 183967)cpicucB023
CsaV3_2G002400Cucsa.116260Cucumber (Gy14) v1cgycucB156
CsaV3_2G002400CmaCh10G006010Cucurbita maxima (Rimu)cmacucB0081
CsaV3_2G002400CmaCh05G013280Cucurbita maxima (Rimu)cmacucB0934
CsaV3_2G002400CmoCh10G006410Cucurbita moschata (Rifu)cmocucB0070
CsaV3_2G002400Cp4.1LG04g09820Cucurbita pepo (Zucchini)cpecucB0826
CsaV3_2G002400Cp4.1LG18g04420Cucurbita pepo (Zucchini)cpecucB0450
CsaV3_2G002400CsGy1G019240Cucumber (Gy14) v2cgybcucB019
CsaV3_2G002400CsGy2G001320Cucumber (Gy14) v2cgybcucB064
CsaV3_2G002400Carg09867Silver-seed gourdcarcucB0147
CsaV3_2G002400Carg10872Silver-seed gourdcarcucB0605
CsaV3_2G002400Cla012334Watermelon (97103) v1cucwmB180
CsaV3_2G002400MELO3C025323Melon (DHL92) v3.5.1cucmeB116
CsaV3_2G002400ClCG06G010330Watermelon (Charleston Gray)cucwcgB156
CsaV3_2G002400Lsi11G002740Bottle gourd (USVL1VR-Ls)cuclsiB108
CsaV3_2G002400MELO3C031348.2Melon (DHL92) v3.6.1cucmedB135
CsaV3_2G002400MELO3C025323.2Melon (DHL92) v3.6.1cucmedB112
CsaV3_2G002400Cla97C11G209050Watermelon (97103) v2cucwmbB108
CsaV3_2G002400Cla97C06G119580Watermelon (97103) v2cucwmbB143
CsaV3_2G002400Bhi06G001639Wax gourdcucwgoB138
CsaV3_2G002400Bhi02G000923Wax gourdcucwgoB219
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CsaV3_2G002400CsaV3_1G030750Cucumber (Chinese Long) v3cuccucB009
The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_2G002400Silver-seed gourdcarcucB0045
CsaV3_2G002400Silver-seed gourdcarcucB0307
CsaV3_2G002400Cucurbita maxima (Rimu)cmacucB0135
CsaV3_2G002400Cucurbita maxima (Rimu)cmacucB0202
CsaV3_2G002400Cucurbita moschata (Rifu)cmocucB0120
CsaV3_2G002400Cucurbita moschata (Rifu)cmocucB0185
CsaV3_2G002400Cucurbita moschata (Rifu)cmocucB0924
CsaV3_2G002400Cucurbita pepo (Zucchini)cpecucB0114
CsaV3_2G002400Cucurbita pepo (Zucchini)cpecucB1015
CsaV3_2G002400Bottle gourd (USVL1VR-Ls)cuclsiB142
CsaV3_2G002400Melon (DHL92) v3.5.1cucmeB142
CsaV3_2G002400Watermelon (Charleston Gray)cucwcgB112
CsaV3_2G002400Watermelon (97103) v1cucwmB174