CsaV3_1G045900 (gene) Cucumber (Chinese Long) v3

NameCsaV3_1G045900
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1 : 31738482 .. 31738748 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGAATCCTCCCTGTAACTGTGGGTCTAAACCACGTGCATCTGTAGTTAAGCATGTGCTTTGTTCACTGATTAAGGCAAGAATTAGACTGTATTTGTTGGCTGGTGCCTTAACAGGTAAGGGTCCTACCAAACCCTTGGCCCATTCCACCCATTTGCTCTGTTGACTGACCTAAGGTAAGCTCATTATTTTATTTTGTATGCTCTCAGTCCCTTTTCTTCTTCTTTACATAATGATGTTATCCAGTTTGGAGCTGAAGATATAA

mRNA sequence

ATGTTGAATCCTCCCTGTAACTGTGGGTCTAAACCACGTGCATCTGTAGTTAAGCATGTGCTTTGTTCACTGATTAAGGCAAGAATTAGACTGTATTTGTTGGCTGGTGCCTTAACAGTCCCTTTTCTTCTTCTTTACATAATGATGTTATCCAGTTTGGAGCTGAAGATATAA

Coding sequence (CDS)

ATGTTGAATCCTCCCTGTAACTGTGGGTCTAAACCACGTGCATCTGTAGTTAAGCATGTGCTTTGTTCACTGATTAAGGCAAGAATTAGACTGTATTTGTTGGCTGGTGCCTTAACAGTCCCTTTTCTTCTTCTTTACATAATGATGTTATCCAGTTTGGAGCTGAAGATATAA

Protein sequence

MLNPPCNCGSKPRASVVKHVLCSLIKARIRLYLLAGALTVPFLLLYIMMLSSLELKI
BLAST of CsaV3_1G045900 vs. NCBI nr
Match: KGN66828.1 (hypothetical protein Csa_1G699570 [Cucumis sativus])

HSP 1 Score: 109.4 bits (272), Expect = 4.2e-21
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0

Query: 1  MLNPPCNCGSKPRASVVKHVLCSLIKARIRLYLLAGALTVPFLLLYIMMLSSLELKI 58
          MLNPPCNCGSKPRASVVKHVLCSLIKARIRLYLLAGALTVPFLLLYIMMLSSLELKI
Sbjct: 1  MLNPPCNCGSKPRASVVKHVLCSLIKARIRLYLLAGALTVPFLLLYIMMLSSLELKI 57

BLAST of CsaV3_1G045900 vs. TrEMBL
Match: tr|A0A0A0LYG4|A0A0A0LYG4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G699570 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.8e-21
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0

Query: 1  MLNPPCNCGSKPRASVVKHVLCSLIKARIRLYLLAGALTVPFLLLYIMMLSSLELKI 58
          MLNPPCNCGSKPRASVVKHVLCSLIKARIRLYLLAGALTVPFLLLYIMMLSSLELKI
Sbjct: 1  MLNPPCNCGSKPRASVVKHVLCSLIKARIRLYLLAGALTVPFLLLYIMMLSSLELKI 57

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN66828.14.2e-21100.00hypothetical protein Csa_1G699570 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LYG4|A0A0A0LYG4_CUCSA2.8e-21100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G699570 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G045900.1CsaV3_1G045900.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_1G045900ClCG01G009880Watermelon (Charleston Gray)cucwcgB025
The following gene(s) are paralogous to this gene:

None