CsaV3_1G044210 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTGTTTACGTACATATAAACCAAAAAAATAGAAATGAAAAAGGCAAAAACAGGGAGGGTCCCCTCTAAGTGGATATATAAATAGGGCATTGTCCTTCAAGAACTTCTTCACATCGGTAGCATTACACACCTCCTTGCTTTCTTACATACATCGAAACCAGCCAAAGCCAACGGAAACATCTCTTTTTGAGAACATGCCAAGAGATCGTGACCCTTTGGTTGTTGGGAGAGTCATCGGCGACGTCGTTGACCCATTCTCGAGGTCAATTTCGATTAGGGTTACTTACTCCACCAAGGAAGTTAACAATGGTTGTGAGCTCAAACCCTCTCAGGTTGTAAATCAACCAAGAGTCGAGATTGGTGGGACCGATCTTCGAACCTTCTTCACTTTGGTAAATGCTTTAATTTTTTTTTTCTCCTTCCCATGTCTTTTTAAATTGATATATTTTGTGGAAAATTGTTTTAACTAGAAAAATTACTGAAAATATTTTCAAATCTAGCAAAATGTTAGAGTCCTATCAACAAATTATTGTAATAGACCGCAGTATAAATTAACTATCTATGTTATCATTTTTTTTAGAAAATATAGAGTTTGGGTCATGAAGGTTGCATTGGAACAACATCCGCCACGAGATAGACACCTTCGTATCCCCTAATCAAAATATATTCAATAAAGCTCAAACATATACAAAAATTGATACACATATCACATAGAGGTAGAGATAAGTCCAAGAAAGAGAGTTACATAGTACAAAAAGAACTAAGATTCATAGCAATTGTCAAAGGATTATAATATTAAAAAAGACCGTATCTATCAATACATAAATAGAAGACGACTATCGCTAACCAACTTTGATATTTTACTCTATTTGTAAATATTGTCATTCATTCATTTTATTGGCTAATCTCTATGTGTTAATAGGTTATGGTGGATCCTGATGCTCCTAGCCCTAGTGATCCTAATCTTGGGGAATACTTGCATTGGTACTTCCTCTTTTACTTCTTTAGTTCAAATTAACAAGTTTAATTTCAATCAACTTTTGGTTGCTTGTTTCTTTTCCTTTTCAATTCTTAACTCTCTCTCTTTTTTCTTCATTTAAGCTCATGCATTTTATAGATATATTAAAAACATGTTAACAGTAATGTAAAAATAAGGTTTTCTTAAAAATATTTAGGGTCATACATCAACATTTTCATTTGTCATATTCATCTTACTAAAACTTGGCTATCCAAAATTCTTTGAATGGAGGATGAATAGAAAATGTAATATTCATAATAAAAAAGTAAAGATATAATTTGTGGAGGATAAAATATTTTTATGTTAACTTTACATTTCCTTTAGTTAAATTCAACTGTTATTTGGGAATTTTTAAAAACAACAAGTACATTTCTAAAAGCTATTGATTTCCAAATTGTGGTTAAAAACAACTTTAAGGTACATTTCTAAAAGCTATTGATTTCCAAATTGTGGTTAAAATAACTTTAGGTACATATATTGGAATAAATTTTGAGGTACAAGCAAGAGTTTTGGTAAATACTGTTTGAAAAGAAAATTCTTTAGATTTTTTTCATAGAATATATGATCAATCTATCTTTTCAACACAAATAAAGTGCACTTTTTTTTCCACTAGGTTATGTAGGGTAAATTAAATGTCATACAATAATAACAATAATAGGGGTCTTTTAAAAAATATAATACTCTATAGAACAATTTTGAAAACGAAAAATCTACACAAATTCACAATGGAAAATATAAAAGAATGCCTCACGATTAATTGGCATCTAGCGCACGTAATATATTTGGGAAACGATAATTTAAATTTAGCTATTCTTTCTTACACGTTGTTTGTTGTTTATATTTAATCGTTTAAATTTGAGTAACCAAATATCAACGATTTTTTGGTTCACGGTCGTTTAGATTTGACACATGGTCGTTTAGATTTGACATATGATCGTTTAGATTTAATTTGATTGTTTAAATTTGGATAGCTAAATCTCAATTATTTTTTTCACGATCGTTAATTTATATATATTTGGATCACGATCGTTTAAATGTTTTTTGGTACAGGATCGTTTACATTTAACAATCCAATATCCAAACGATTTTTTTCACCGTCTTTTATATTTGACACGTGATCTTAAACAACCCAATAACAACCGAAAAAATAGATATTTTATATTTGGTACACGATCTTGAACCAAATAACAGTTTGAAAATAAATGCAGAAGAAGAGAAAAAGACGATGAAAAGGAAAAGAAAAATTGCAGAAGGAAGAGTATAAAAAGGAAGGACAAACGAAAATATTTTAAAAAATCACCGACAAAAGAAAACCTATAATTGTTTTAAAAAATGTTCAGTTTTATGAGTTTTTTCATTTTGTTACACGAACCATAAATGTTTTGCCGATTTGTTATATTTATGAAAGTTATCCTTAATAATAACCACTCCAAAATAATATATATATATATATATAATCTATTCTCATGAAATAATTTTTTAATGCATTTACTAAAGGGTTGGTTTTACTTTGGAGAACTTTTTCAAAAGGAAAGTTGTGGTTTCTCCTCTAGGTATTCTCCTATTCTTCCATAGCCTTCTTTTTTTCTTTTTATTTTTCTTCCTTTTCATCTTTCTGTTAAAAGCCTTACCTCTCTTTTCACAACTATTGATAATAATAATAAAACAATTATCAATAGAACCAAACATAGTTCTCATGGATAGACTGATATATGTATAGATATGCATTTTCACTCATAAACGATACTTTTATACCTTTAAACTCAAAAGTAAATAATTAAATTAGCCTATAACCATATATTTTCTTTTTCGTTTGAAAATATTACGACTTTTTTCACCATATCTTTCAAAGATTTACCTGCATCTTTCTTAACTATAATAATTGTATTCTTAGTCAAATTTCATAAACAAAAACAACTTTCTAAAATCTAACTTTAATTAGTTTTCATATTTTGGCTTTATTTTTCAAACTATTGGTACTAGCATATAGTTAACAAATAAAGAATGAGGGAGGTGGAAGCAATGTCTATGAGATTAATTTAAAATCCAAAACAATTGGTTATCAAACAAGTTAACTTTTGAAATACAAGTTGATTATTATTAATGGAATTTTGAATCTCGGATCTTATAACATTAATATTCTATTTCATAAAGAAAAACTGCTTTGGCTAGGTGTGTCTAGATGATATGTATATATATAAAGAACAAATAAGAAAGAAGAGTCTTTTCACTATTAAGAATGAAAGGGGAATAAAGCTGAAACTAGCTTGTCTAATTGATAGATCAACTTCAATACATGAATAAAAGAATTTTTCTTTTATTGTCCTTTCCTTCGTCCAATTAATTATTATCGATTTTTTCAAATATATTACATGATGAGGATTGAAGTGGACACAGATGGGAATCATGGATTATGATCTTCAGCTTTAGAGTAAAAAAAAAAAAGGTTAACTAATGAAGAGATTCCTTGTACAAGTACTACACGCTGTTTTCCATTTCTCTCTTGTGGCCCAAAGAAAGAAAGAAAGAAAGAAAAAAGACATGCCCACGGGGTCTTGCTTTTGATTCCCAATAAAGTTTGAACGACTTCTCTAACCAGCCATCCATGAAAATAATAGTAGGAAAAAAGTAAAAAAAGTAGAGGGATGAAAATAGGATCGAAGTTTCGTGGTAAGTTAGATATATCAAAAAGTAAGCCAACACAATTTTCTCTTATATAATACGAGACATGTACAACTTCATTCAACCTTTTTGGTTTTTACCACTGTTTTTTTAGTTTCATTTAATTGCTCCTTTATATTAATCAATTATTTATTATTATGGTTCATTTTGCAGGTTGGTGACTGATATTCCAGCTACAACAGGTGCAACCTTTGGTAAGATGTTTTCCTTTAACTAAACATGCAAATTAAATTCATAAAATAAAGAACAGTTATTTGTAAATTCTAGAGGGTAAGGGGTTGTATTGTTTCTTTTAATACAACATGTAAAAGTGATCAGGAGGGTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAAGAGACCAAACAAAAGAAAATGTGATTGTTTGAATAAGTAGTTTCTAAATTTATTGTAAACGATAAAATGGTGTTTATTAGGAAATGTGATTAAGAGAGAATATTGTAAAAATTGTGTAGGGCAAGAGATAGTATGCTATGAGAGTCCAAGACCAACGGTGGGGATACATCGATTCGTGCTAGTCTTGTTTAGACAACTTGGAAGGCAAACAGTGTACGCACCAGGTTGGCGTCAGAACTTCAATACAAGAGACTTTGCTGAGCTTTACAATCTTGGCTTACCAGTTGCCGCTGTTTATTTCAATTGTCAAAGGGAAAGTGGTTCTGGTGGAAGGAGAAGAGTCCAAGATGATTATTAATTAACTTATAATTAAACCCACTTTTTACGCAATATCACATTATTATTATTGTTGAAAAAATATATTTATACATTTGCAAACATAAGCTCACTTCAACCGACACCTATATCTACTTAAGACGAGAGGTCTTCAGAAGAAAAAAAATAGTTCATTATTATTATTATTATTATTCAACTATATATATGTGAACAGGTGATCGAGGTTGAGGGGTTAATAAGGGCAAAATACTTTGTTGTTTAATTGCCCTTTAAACGATAATATTTGCAATAAGGTCATTTGATATACTAATATTAGAGTTTATTAGTTTTGTTAGTTTTTATTTTGTTACATTATGTTATTAGACGGTTGTATCAAGTGGCTATATATATATATATATGTGCCCTTTTTCATCATCAATAAAATAAGAAGGGTTTATTTACACTCTCTCCATATGGTATGAATTGAAATTTAG ATGCCAAGAGATCGTGACCCTTTGGTTGTTGGGAGAGTCATCGGCGACGTCGTTGACCCATTCTCGAGGTCAATTTCGATTAGGGTTACTTACTCCACCAAGGAAGTTAACAATGGTTGTGAGCTCAAACCCTCTCAGGTTGTAAATCAACCAAGAGTCGAGATTGGTGGGACCGATCTTCGAACCTTCTTCACTTTGGTTATGGTGGATCCTGATGCTCCTAGCCCTAGTGATCCTAATCTTGGGGAATACTTGCATTGGTTGGTGACTGATATTCCAGCTACAACAGGTGCAACCTTTGGGCAAGAGATAGTATGCTATGAGAGTCCAAGACCAACGGTGGGGATACATCGATTCGTGCTAGTCTTGTTTAGACAACTTGGAAGGCAAACAGTGTACGCACCAGGTTGGCGTCAGAACTTCAATACAAGAGACTTTGCTGAGCTTTACAATCTTGGCTTACCAGTTGCCGCTGTTTATTTCAATTGTCAAAGGGAAAGTGGTTCTGGTGGAAGGAGAAGAGTCCAAGATGATTATTAA ATGCCAAGAGATCGTGACCCTTTGGTTGTTGGGAGAGTCATCGGCGACGTCGTTGACCCATTCTCGAGGTCAATTTCGATTAGGGTTACTTACTCCACCAAGGAAGTTAACAATGGTTGTGAGCTCAAACCCTCTCAGGTTGTAAATCAACCAAGAGTCGAGATTGGTGGGACCGATCTTCGAACCTTCTTCACTTTGGTTATGGTGGATCCTGATGCTCCTAGCCCTAGTGATCCTAATCTTGGGGAATACTTGCATTGGTTGGTGACTGATATTCCAGCTACAACAGGTGCAACCTTTGGGCAAGAGATAGTATGCTATGAGAGTCCAAGACCAACGGTGGGGATACATCGATTCGTGCTAGTCTTGTTTAGACAACTTGGAAGGCAAACAGTGTACGCACCAGGTTGGCGTCAGAACTTCAATACAAGAGACTTTGCTGAGCTTTACAATCTTGGCTTACCAGTTGCCGCTGTTTATTTCAATTGTCAAAGGGAAAGTGGTTCTGGTGGAAGGAGAAGAGTCCAAGATGATTATTAA MPRDRDPLVVGRVIGDVVDPFSRSISIRVTYSTKEVNNGCELKPSQVVNQPRVEIGGTDLRTFFTLVMVDPDAPSPSDPNLGEYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRFVLVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRVQDDY
BLAST of CsaV3_1G044210 vs. NCBI nr
Match: KGN66637.1 (FT-like protein [Cucumis sativus]) HSP 1 Score: 378.6 bits (971), Expect = 1.2e-101 Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0
BLAST of CsaV3_1G044210 vs. NCBI nr
Match: NP_001292686.1 (protein HEADING DATE 3A [Cucumis sativus] >XP_008443654.1 PREDICTED: protein HEADING DATE 3A [Cucumis melo] >BAH28253.1 FT-like protein [Cucumis sativus]) HSP 1 Score: 375.6 bits (963), Expect = 9.7e-101 Identity = 178/179 (99.44%), Postives = 178/179 (99.44%), Query Frame = 0
BLAST of CsaV3_1G044210 vs. NCBI nr
Match: XP_022149957.1 (protein HEADING DATE 3A [Momordica charantia]) HSP 1 Score: 367.9 bits (943), Expect = 2.0e-98 Identity = 174/179 (97.21%), Postives = 176/179 (98.32%), Query Frame = 0
BLAST of CsaV3_1G044210 vs. NCBI nr
Match: XP_023520641.1 (protein HEADING DATE 3A [Cucurbita pepo subsp. pepo]) HSP 1 Score: 356.7 bits (914), Expect = 4.7e-95 Identity = 166/179 (92.74%), Postives = 173/179 (96.65%), Query Frame = 0
BLAST of CsaV3_1G044210 vs. NCBI nr
Match: ABR20499.1 (FTL2 [Cucurbita moschata]) HSP 1 Score: 356.3 bits (913), Expect = 6.1e-95 Identity = 165/179 (92.18%), Postives = 173/179 (96.65%), Query Frame = 0
BLAST of CsaV3_1G044210 vs. TAIR10
Match: AT1G65480.1 (PEBP (phosphatidylethanolamine-binding protein) family protein) HSP 1 Score: 297.0 bits (759), Expect = 8.0e-81 Identity = 132/169 (78.11%), Postives = 152/169 (89.94%), Query Frame = 0
BLAST of CsaV3_1G044210 vs. TAIR10
Match: AT4G20370.1 (PEBP (phosphatidylethanolamine-binding protein) family protein) HSP 1 Score: 286.2 bits (731), Expect = 1.4e-77 Identity = 129/169 (76.33%), Postives = 147/169 (86.98%), Query Frame = 0
BLAST of CsaV3_1G044210 vs. TAIR10
Match: AT5G62040.1 (PEBP (phosphatidylethanolamine-binding protein) family protein) HSP 1 Score: 214.5 bits (545), Expect = 5.2e-56 Identity = 104/176 (59.09%), Postives = 137/176 (77.84%), Query Frame = 0
BLAST of CsaV3_1G044210 vs. TAIR10
Match: AT5G03840.1 (PEBP (phosphatidylethanolamine-binding protein) family protein) HSP 1 Score: 212.6 bits (540), Expect = 2.0e-55 Identity = 101/169 (59.76%), Postives = 132/169 (78.11%), Query Frame = 0
BLAST of CsaV3_1G044210 vs. TAIR10
Match: AT2G27550.1 (centroradialis) HSP 1 Score: 209.9 bits (533), Expect = 1.3e-54 Identity = 103/171 (60.23%), Postives = 130/171 (76.02%), Query Frame = 0
BLAST of CsaV3_1G044210 vs. Swiss-Prot
Match: sp|Q93WI9|HD3A_ORYSJ (Protein HEADING DATE 3A OS=Oryza sativa subsp. japonica OX=39947 GN=HD3A PE=1 SV=1) HSP 1 Score: 310.8 bits (795), Expect = 9.6e-84 Identity = 139/171 (81.29%), Postives = 157/171 (91.81%), Query Frame = 0
BLAST of CsaV3_1G044210 vs. Swiss-Prot
Match: sp|Q9SXZ2|FT_ARATH (Protein FLOWERING LOCUS T OS=Arabidopsis thaliana OX=3702 GN=FT PE=1 SV=2) HSP 1 Score: 297.0 bits (759), Expect = 1.4e-79 Identity = 132/169 (78.11%), Postives = 152/169 (89.94%), Query Frame = 0
BLAST of CsaV3_1G044210 vs. Swiss-Prot
Match: sp|Q8VWH2|RFT1_ORYSJ (Protein RICE FLOWERING LOCUS T 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RFT1 PE=2 SV=1) HSP 1 Score: 294.3 bits (752), Expect = 9.3e-79 Identity = 131/168 (77.98%), Postives = 150/168 (89.29%), Query Frame = 0
BLAST of CsaV3_1G044210 vs. Swiss-Prot
Match: sp|Q9S7R5|TSF_ARATH (Protein TWIN SISTER of FT OS=Arabidopsis thaliana OX=3702 GN=TSF PE=2 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 2.5e-76 Identity = 129/169 (76.33%), Postives = 147/169 (86.98%), Query Frame = 0
BLAST of CsaV3_1G044210 vs. Swiss-Prot
Match: sp|Q9XH43|CET2_TOBAC (CEN-like protein 2 OS=Nicotiana tabacum OX=4097 GN=CET2 PE=2 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 1.5e-55 Identity = 108/171 (63.16%), Postives = 131/171 (76.61%), Query Frame = 0
BLAST of CsaV3_1G044210 vs. TrEMBL
Match: tr|A0A0A0M0H5|A0A0A0M0H5_CUCSA (FT-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G651710 PE=4 SV=1) HSP 1 Score: 378.6 bits (971), Expect = 7.6e-102 Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0
BLAST of CsaV3_1G044210 vs. TrEMBL
Match: tr|A0A1S3B9B8|A0A1S3B9B8_CUCME (protein HEADING DATE 3A OS=Cucumis melo OX=3656 GN=LOC103487203 PE=4 SV=1) HSP 1 Score: 375.6 bits (963), Expect = 6.4e-101 Identity = 178/179 (99.44%), Postives = 178/179 (99.44%), Query Frame = 0
BLAST of CsaV3_1G044210 vs. TrEMBL
Match: tr|B9ZYL0|B9ZYL0_CUCSA (FT-like protein OS=Cucumis sativus OX=3659 GN=CsFT PE=2 SV=1) HSP 1 Score: 375.6 bits (963), Expect = 6.4e-101 Identity = 178/179 (99.44%), Postives = 178/179 (99.44%), Query Frame = 0
BLAST of CsaV3_1G044210 vs. TrEMBL
Match: tr|A6YE10|A6YE10_CUCMO (FTL2 OS=Cucurbita moschata OX=3662 PE=2 SV=1) HSP 1 Score: 356.3 bits (913), Expect = 4.0e-95 Identity = 165/179 (92.18%), Postives = 173/179 (96.65%), Query Frame = 0
BLAST of CsaV3_1G044210 vs. TrEMBL
Match: tr|A6XN27|A6XN27_CUCMA (Flowering locus T-like 2 OS=Cucurbita maxima OX=3661 GN=FTL2 PE=2 SV=1) HSP 1 Score: 354.4 bits (908), Expect = 1.5e-94 Identity = 164/179 (91.62%), Postives = 172/179 (96.09%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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