Cp4.1LG00g01430 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG00g01430
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Flowering locus T-like protein
Location	Cp4.1LG00 : 3714676 .. 3717236 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCACCAGACAATTACACATCTTTTCAGCTCTCTCTCACGTACATCAATACCCAACCTACCATCCTTTCGACGCCATGCCGAGAGACCGTGACCCTTTGGTCGTCGGGAGAGTCATCGGCGACGTTATCGACTCGTTCACGAGGTCCATTTCGATTAGGGCTACTTACAACAATAGGGAAATTAGCAATGGGTGTGAGCTCAAACCCTCTCAAGTTGTCAACCAGCCAAGAGTTGAGATTGGTGGCACTGACCTTCGCACCTTCTTCACTTTGGTAAATCCTTTGTTTTTACTTTTTCACTTTCTTGGCCATGCATGTTTTTTACCCTTTCATTTCACTTTGTTTGCTATAGGTTATGGTGGATCCTGATGCTCCTAGCCCTAGTGACCCTAATCTAAGGGAATACTTGCATTGGTAAGTCCATTTTTTTTTTACCTTTTCACTCTAATTTTTTTTTACGGTGTCGAGAGGTCATCATAATACAATCGACAATTTTACACCGTTAAATGTGAAACAAAAAATTTGTACGTCTCCTTCACTTTTGCATCCTATGATTATTAAAACGCAAACATTTTTTTGATATATATATATATATATAAATATATATATATATATATATATATATATATAATCGTTATTAAGAGTTGGCCACGTTGTGGCGACCTCATTGAATAATTTTTCATCATGGGTAATTTTTCTTTTTACTTTTTCCGAGAAAGGTAACCTATTTTTTTCCAAAACAGAAATCATTCTTTCTAATAACTAACCGTCCATACGTACATTTTTACCTGATCATGACGATTTTTTTTTTTATAGATTGAAAGTTTAAATTTTTAATGTTAATAATAATTTTTAAGCATTATTATATTTTAAATATAATAAGGTAAAGAATTGAACCATCGATTTTTAGGAGGTAAATTAGTGTCTTATCCAATAAGATATGTTCGAATAGAATCATAGATGTCTCTAGAATTGGAGATTGTCAGTGTCCTTTCGTGAATTAAATGGATAGTTTCGGGGACACGTGCCCCTTTAACTCCAACGTGGATCCGTCCCGATGTAAATGTATATAATTGTTTCGGTTCGATTTGCAGGTTGGTGACTGATATCCCCGCTACAACTGGAGCGACCTTTGGTATGTTATCTTTATGTTTCTAAACACTTTGTTTATAGAATTTGTTTATGTCGTCAAGTTTATTAAAAGTTTGATAGGGATGCCTCCATAACCTTATATATTCCTTACCATTATTAAAGTACTTTGAGAAAGAGATCCCGAAAAAATATTAAATTAGCTTTTTCTCCCGTCAATTTCTAATATTACGAGTATGAATCTGTGCACACTCTTCCAAATGTGAGATCCACATCAGTTGGAGAGAGAAATGAAACATTGAGGGTGGAAATCTCTCCCTAGTAGATGCGTTTTAAAACGGTGAGACTGATGACAATACGTAACGGGTTAAAGTGAACAATATCTGGCGGTGGGCTTGGACTGTTACAAATAGTATCAAAGTCCGTCTCCGAGCGGTGTACCAACGAGGACGTTGGGTCTCCAAGGGGGATTTGTGAGTTCCCACCTTGGTTGGAGAGGGGAACAAAACATACTTAAGGTGTGGAAACCTCTACCCAGCATACGTGTTCTAAAACCAAGAGGCTAACGACGACACGTAACGGGATAAAACGAACAATATGTACCAGCGGTGGGCTTGGACTGTTACAAATGGTATCAAACCCCCATCACTGAGCAGTGTGCCAGTGAGGACATTGGGTCTCCAAGGGTGATTTGTGAGATCCCACGTCGATTAGGAAGGAGAACGAAACATTCTTTATAAAAGTGCGTAAACTTCTCCCTAGCAGACGCGTTTCAAAACCGTGAAGCTGGCGGTGATACGTAACAGGCTAAAGTGGACAATCTGGATTATTACAAATGGTATCAAAACCCATCACCGAGCGGTATACTTCGAGGACGCTAGGTCTCCACGGGGGATGGATCGTGAGATCCAGCAGCCTTTCCCCAACAGACGCATTAGTCATAAATTCTAGTTTCTTCTTTTCTCGAGTTTAATGTCCCGTGAAAACATAGGACTTAAACCGACTCCGACATCTTAGTTATACATATATTAATCGATATTCATTTGTGGTTGGAACAATGGTAGGTCAAGAGATCGTGTGCTATGAGAGCCCAAGGCCAACGGTGGGTATCCATCGTCTGGTGCTGGTGTTGTTTCGACAGCTTGGAAGGCAAACGGTGTACGCTCCTGGGTGGCGCCAGAACTTCAACACAAGAGACTTTGCAGAGCTTTACAATCTAGGCTTGCCGGTGGCAGCCGTTTATTTCAATTGCCAAAGGGAAAGTGGGTCTGGTGGAAGGAGAAGAAGCCAAGATGATTTCTAAGTCCCCACTTCACATTAATTAGATTAATATTATAGCCCCTATCATCTATTAATCCTACCTTGCTTTTAGATTAACCTTTATTTTGGATCATAAATAAGCCCAAATGCATACCTAAATATTGCTCTTATACTATATATTATAATATTATATATATAATATGATCGTTTCGT

mRNA sequence

TCACCAGACAATTACACATCTTTTCAGCTCTCTCTCACGTACATCAATACCCAACCTACCATCCTTTCGACGCCATGCCGAGAGACCGTGACCCTTTGGTCGTCGGGAGAGTCATCGGCGACGTTATCGACTCGTTCACGAGGTCCATTTCGATTAGGGCTACTTACAACAATAGGGAAATTAGCAATGGGTGTGAGCTCAAACCCTCTCAAGTTGTCAACCAGCCAAGAGTTGAGATTGGTGGCACTGACCTTCGCACCTTCTTCACTTTGGTTATGGTGGATCCTGATGCTCCTAGCCCTAGTCAAGAGATCGTGTGCTATGAGAGCCCAAGGCCAACGGTGGGTATCCATCGTCTGGTGCTGGTGTTGTTTCGACAGCTTGGAAGGCAAACGGTGTACGCTCCTGGGTGGCGCCAGAACTTCAACACAAGAGACTTTGCAGAGCTTTACAATCTAGGCTTGCCGGTGGCAGCCGTTTATTTCAATTGCCAAAGGGAAAGTGGGTCTGGTGGAAGGAGAAGAAGCCAAGATGATTTCTAAGTCCCCACTTCACATTAATTAGATTAATATTATAGCCCCTATCATCTATTAATCCTACCTTGCTTTTAGATTAACCTTTATTTTGGATCATAAATAAGCCCAAATGCATACCTAAATATTGCTCTTATACTATATATTATAATATTATATATATAATATGATCGTTTCGT

Coding sequence (CDS)

ATGCCGAGAGACCGTGACCCTTTGGTCGTCGGGAGAGTCATCGGCGACGTTATCGACTCGTTCACGAGGTCCATTTCGATTAGGGCTACTTACAACAATAGGGAAATTAGCAATGGGTGTGAGCTCAAACCCTCTCAAGTTGTCAACCAGCCAAGAGTTGAGATTGGTGGCACTGACCTTCGCACCTTCTTCACTTTGGTTATGGTGGATCCTGATGCTCCTAGCCCTAGTCAAGAGATCGTGTGCTATGAGAGCCCAAGGCCAACGGTGGGTATCCATCGTCTGGTGCTGGTGTTGTTTCGACAGCTTGGAAGGCAAACGGTGTACGCTCCTGGGTGGCGCCAGAACTTCAACACAAGAGACTTTGCAGAGCTTTACAATCTAGGCTTGCCGGTGGCAGCCGTTTATTTCAATTGCCAAAGGGAAAGTGGGTCTGGTGGAAGGAGAAGAAGCCAAGATGATTTCTAA

Protein sequence

MPRDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDLRTFFTLVMVDPDAPSPSQEIVCYESPRPTVGIHRLVLVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF

Homology

[Close]

BLAST of Cp4.1LG00g01430 vs. Swiss-Prot
Match: HD3A_ORYSJ (Protein HEADING DATE 3A OS=Oryza sativa subsp. japonica GN=HD3A PE=1 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 2.6e-66
Identity = 118/171 (69.01%), Postives = 137/171 (80.12%), Query Frame = 1


Query: 3   RDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDLRT 62
           RDRDPLVVGRV+GDV+D+F RS +++ TY ++ +SNGCELKPS V +QPRVE+GG D+RT
Sbjct: 6   RDRDPLVVGRVVGDVLDAFVRSTNLKVTYGSKTVSNGCELKPSMVTHQPRVEVGGNDMRT 65

Query: 63  FFTLVMVDPDAPSPS------------------------QEIVCYESPRPTVGIHRLVLV 122
           F+TLVMVDPDAPSPS                        QE++CYESPRPT+GIHRLV V
Sbjct: 66  FYTLVMVDPDAPSPSDPNLREYLHWLVTDIPGTTAASFGQEVMCYESPRPTMGIHRLVFV 125

Query: 123 LFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRR 150
           LF+QLGRQTVYAPGWRQNFNT+DFAELYNLG PVAAVYFNCQRE+GSGGRR
Sbjct: 126 LFQQLGRQTVYAPGWRQNFNTKDFAELYNLGSPVAAVYFNCQREAGSGGRR 176

[Close]

BLAST of Cp4.1LG00g01430 vs. Swiss-Prot
Match: FT_ARATH (Protein FLOWERING LOCUS T OS=Arabidopsis thaliana GN=FT PE=1 SV=2)

HSP 1 Score: 235.0 bits (598), Expect = 5.7e-61
Identity = 110/169 (65.09%), Postives = 129/169 (76.33%), Query Frame = 1


Query: 5   RDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDLRTFF 64
           RDPL+V RV+GDV+D F RSI+++ TY  RE++NG +L+PSQV N+PRVEIGG DLR F+
Sbjct: 6   RDPLIVSRVVGDVLDPFNRSITLKVTYGQREVTNGLDLRPSQVQNKPRVEIGGEDLRNFY 65

Query: 65  TLVMVDPDAPSPSQ------------------------EIVCYESPRPTVGIHRLVLVLF 124
           TLVMVDPD PSPS                         EIVCYE+P PT GIHR+V +LF
Sbjct: 66  TLVMVDPDVPSPSNPHLREYLHWLVTDIPATTGTTFGNEIVCYENPSPTAGIHRVVFILF 125

Query: 125 RQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRR 150
           RQLGRQTVYAPGWRQNFNTR+FAE+YNLGLPVAAV++NCQRESG GGRR
Sbjct: 126 RQLGRQTVYAPGWRQNFNTREFAEIYNLGLPVAAVFYNCQRESGCGGRR 174

[Close]

BLAST of Cp4.1LG00g01430 vs. Swiss-Prot
Match: HD3B_ORYSJ (Protein HEADING DATE 3B OS=Oryza sativa subsp. japonica GN=HD3B PE=2 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 3.7e-60
Identity = 110/168 (65.48%), Postives = 127/168 (75.60%), Query Frame = 1


Query: 6   DPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDLRTFFT 65
           DPLVVGR++GDV+D F R  ++  +Y  R +SNGCELKPS V  QPRV +GG D+RTF+T
Sbjct: 8   DPLVVGRIVGDVLDPFVRITNLSVSYGARIVSNGCELKPSMVTQQPRVVVGGNDMRTFYT 67

Query: 66  LVMVDPDAPSPS------------------------QEIVCYESPRPTVGIHRLVLVLFR 125
           LVMVDPDAPSPS                        QE++CYESPRPT+GIHRLV VLF+
Sbjct: 68  LVMVDPDAPSPSNPNLREYLHWLVTDIPGTTGATFGQEVMCYESPRPTMGIHRLVFVLFQ 127

Query: 126 QLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRR 150
           QLGRQTVYAPGWRQNF+TR+FAELYNLG PVA VYFNCQRE+GSGGRR
Sbjct: 128 QLGRQTVYAPGWRQNFSTRNFAELYNLGSPVATVYFNCQREAGSGGRR 175

[Close]

BLAST of Cp4.1LG00g01430 vs. Swiss-Prot
Match: TSF_ARATH (Protein TWIN SISTER of FT OS=Arabidopsis thaliana GN=TSF PE=2 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 4.8e-60
Identity = 110/169 (65.09%), Postives = 128/169 (75.74%), Query Frame = 1


Query: 5   RDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDLRTFF 64
           RDPLVVG V+GDV+D FTR +S++ TY +RE++NG +L+PSQV+N+P VEIGG D R F+
Sbjct: 6   RDPLVVGSVVGDVLDPFTRLVSLKVTYGHREVTNGLDLRPSQVLNKPIVEIGGDDFRNFY 65

Query: 65  TLVMVDPDAPSPSQ------------------------EIVCYESPRPTVGIHRLVLVLF 124
           TLVMVDPD PSPS                         E+VCYESPRP  GIHR+VLVLF
Sbjct: 66  TLVMVDPDVPSPSNPHQREYLHWLVTDIPATTGNAFGNEVVCYESPRPPSGIHRIVLVLF 125

Query: 125 RQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRR 150
           RQLGRQTVYAPGWRQ FNTR+FAE+YNLGLPVAA YFNCQRE+G GGRR
Sbjct: 126 RQLGRQTVYAPGWRQQFNTREFAEIYNLGLPVAASYFNCQRENGCGGRR 174

[Close]

BLAST of Cp4.1LG00g01430 vs. Swiss-Prot
Match: BFT_ARATH (Protein BROTHER of FT and TFL 1 OS=Arabidopsis thaliana GN=BFT PE=3 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 2.8e-39
Identity = 89/176 (50.57%), Postives = 114/176 (64.77%), Query Frame = 1


Query: 1   MPRDRDPLVVGRVIGDVIDSFTRSISIRATYN-NREISNGCELKPSQVVNQPRVEIGGTD 60
           M R+ +PL+VGRVIGDV++ F  S+++R T+N N  +SNG EL PS ++++PRVEIGG D
Sbjct: 1   MSREIEPLIVGRVIGDVLEMFNPSVTMRVTFNSNTIVSNGHELAPSLLLSKPRVEIGGQD 60

Query: 61  LRTFFTLVMVDPDAPSPS------------------------QEIVCYESPRPTVGIHRL 120
           LR+FFTL+M+DPDAPSPS                        +EIV YE+P+P  GIHR 
Sbjct: 61  LRSFFTLIMMDPDAPSPSNPYMREYLHWMVTDIPGTTDASFGREIVRYETPKPVAGIHRY 120

Query: 121 VLVLFRQLGRQTV-YAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR 151
           V  LF+Q GRQ V  AP  R+ FNT  F+  + L  PVAAVYFN QRE+    RRR
Sbjct: 121 VFALFKQRGRQAVKAAPETRECFNTNAFSSYFGLSQPVAAVYFNAQRETAP--RRR 174

[Close]

BLAST of Cp4.1LG00g01430 vs. TrEMBL
Match: A6YE10_CUCMO (FTL2 OS=Cucurbita moschata PE=2 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 5.9e-81
Identity = 154/179 (86.03%), Postives = 155/179 (86.59%), Query Frame = 1


Query: 1   MPRDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60
           MPRDRDPLV+GRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL
Sbjct: 1   MPRDRDPLVIGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPS------------------------QEIVCYESPRPTVGIHRLV 120
           RTFFTLVMVDPDAPSPS                        QEIVCYESPRPTVGIHRLV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF 156
           LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF 179

[Close]

BLAST of Cp4.1LG00g01430 vs. TrEMBL
Match: A6XN27_CUCMA (Flowering locus T-like 2 OS=Cucurbita maxima GN=FTL2 PE=2 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 2.2e-80
Identity = 153/179 (85.47%), Postives = 155/179 (86.59%), Query Frame = 1


Query: 1   MPRDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60
           MPRDRDPLVVGRVIGDVIDSFT+SISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL
Sbjct: 1   MPRDRDPLVVGRVIGDVIDSFTKSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPS------------------------QEIVCYESPRPTVGIHRLV 120
           RTFFTLVMVDPDAPSPS                        QEIVCYESPRPTVGIHRLV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGANFGQEIVCYESPRPTVGIHRLV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF 156
           LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR+QDDF
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRTQDDF 179

[Close]

BLAST of Cp4.1LG00g01430 vs. TrEMBL
Match: A0A0A0M0H5_CUCSA (FT-like protein OS=Cucumis sativus GN=Csa_1G651710 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 7.5e-76
Identity = 143/179 (79.89%), Postives = 150/179 (83.80%), Query Frame = 1


Query: 1   MPRDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60
           MPRDRDPLVVGRVIGDV+D F+RSISIR TY+ +E++NGCELKPSQVVNQPRVEIGGTDL
Sbjct: 1   MPRDRDPLVVGRVIGDVVDPFSRSISIRVTYSTKEVNNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPS------------------------QEIVCYESPRPTVGIHRLV 120
           RTFFTLVMVDPDAPSPS                        QEIVCYESPRPTVGIHR V
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLGEYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRFV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF 156
           LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR QDD+
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRVQDDY 179

[Close]

BLAST of Cp4.1LG00g01430 vs. TrEMBL
Match: B9ZYL0_CUCSA (FT-like protein OS=Cucumis sativus GN=CsFT PE=2 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 7.5e-76
Identity = 143/179 (79.89%), Postives = 150/179 (83.80%), Query Frame = 1


Query: 1   MPRDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60
           MPRDRDPLVVGRVIGDV+D F+RSISIR TY+ +E++NGCELKPSQVVNQPRVEIGGTDL
Sbjct: 1   MPRDRDPLVVGRVIGDVVDPFSRSISIRVTYSTKEVNNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPS------------------------QEIVCYESPRPTVGIHRLV 120
           RTFFTLVMVDPDAPSPS                        QEIVCYESPRPTVGIHR V
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRFV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF 156
           LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR QDD+
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRVQDDY 179

[Close]

BLAST of Cp4.1LG00g01430 vs. TrEMBL
Match: A0A077K8V1_FAGCR (Flowering locus T-like protein OS=Fagus crenata GN=FT PE=2 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 2.0e-73
Identity = 138/174 (79.31%), Postives = 145/174 (83.33%), Query Frame = 1


Query: 1   MPRDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60
           MPRDRDPLVVGRVIGDV+D FTRSIS+RA YNNRE++NGCELKPSQVVNQPRV+IGG DL
Sbjct: 1   MPRDRDPLVVGRVIGDVLDPFTRSISLRANYNNREVNNGCELKPSQVVNQPRVDIGGEDL 60

Query: 61  RTFFTLVMVDPDAPSPS------------------------QEIVCYESPRPTVGIHRLV 120
           RTF+TLVMVDPDAPSPS                        QE+VCYESPRPTVGIHR V
Sbjct: 61  RTFYTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGASFGQEVVCYESPRPTVGIHRFV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR 151
            VLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR
Sbjct: 121 FVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR 174

[Close]

BLAST of Cp4.1LG00g01430 vs. TAIR10
Match: AT1G65480.1 (AT1G65480.1 PEBP (phosphatidylethanolamine-binding protein) family protein)

HSP 1 Score: 235.0 bits (598), Expect = 3.2e-62
Identity = 110/169 (65.09%), Postives = 129/169 (76.33%), Query Frame = 1


Query: 5   RDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDLRTFF 64
           RDPL+V RV+GDV+D F RSI+++ TY  RE++NG +L+PSQV N+PRVEIGG DLR F+
Sbjct: 6   RDPLIVSRVVGDVLDPFNRSITLKVTYGQREVTNGLDLRPSQVQNKPRVEIGGEDLRNFY 65

Query: 65  TLVMVDPDAPSPSQ------------------------EIVCYESPRPTVGIHRLVLVLF 124
           TLVMVDPD PSPS                         EIVCYE+P PT GIHR+V +LF
Sbjct: 66  TLVMVDPDVPSPSNPHLREYLHWLVTDIPATTGTTFGNEIVCYENPSPTAGIHRVVFILF 125

Query: 125 RQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRR 150
           RQLGRQTVYAPGWRQNFNTR+FAE+YNLGLPVAAV++NCQRESG GGRR
Sbjct: 126 RQLGRQTVYAPGWRQNFNTREFAEIYNLGLPVAAVFYNCQRESGCGGRR 174

[Close]

BLAST of Cp4.1LG00g01430 vs. TAIR10
Match: AT4G20370.1 (AT4G20370.1 PEBP (phosphatidylethanolamine-binding protein) family protein)

HSP 1 Score: 231.9 bits (590), Expect = 2.7e-61
Identity = 110/169 (65.09%), Postives = 128/169 (75.74%), Query Frame = 1


Query: 5   RDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDLRTFF 64
           RDPLVVG V+GDV+D FTR +S++ TY +RE++NG +L+PSQV+N+P VEIGG D R F+
Sbjct: 6   RDPLVVGSVVGDVLDPFTRLVSLKVTYGHREVTNGLDLRPSQVLNKPIVEIGGDDFRNFY 65

Query: 65  TLVMVDPDAPSPSQ------------------------EIVCYESPRPTVGIHRLVLVLF 124
           TLVMVDPD PSPS                         E+VCYESPRP  GIHR+VLVLF
Sbjct: 66  TLVMVDPDVPSPSNPHQREYLHWLVTDIPATTGNAFGNEVVCYESPRPPSGIHRIVLVLF 125

Query: 125 RQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRR 150
           RQLGRQTVYAPGWRQ FNTR+FAE+YNLGLPVAA YFNCQRE+G GGRR
Sbjct: 126 RQLGRQTVYAPGWRQQFNTREFAEIYNLGLPVAASYFNCQRENGCGGRR 174

[Close]

BLAST of Cp4.1LG00g01430 vs. TAIR10
Match: AT5G62040.1 (AT5G62040.1 PEBP (phosphatidylethanolamine-binding protein) family protein)

HSP 1 Score: 162.9 bits (411), Expect = 1.6e-40
Identity = 89/176 (50.57%), Postives = 114/176 (64.77%), Query Frame = 1


Query: 1   MPRDRDPLVVGRVIGDVIDSFTRSISIRATYN-NREISNGCELKPSQVVNQPRVEIGGTD 60
           M R+ +PL+VGRVIGDV++ F  S+++R T+N N  +SNG EL PS ++++PRVEIGG D
Sbjct: 1   MSREIEPLIVGRVIGDVLEMFNPSVTMRVTFNSNTIVSNGHELAPSLLLSKPRVEIGGQD 60

Query: 61  LRTFFTLVMVDPDAPSPS------------------------QEIVCYESPRPTVGIHRL 120
           LR+FFTL+M+DPDAPSPS                        +EIV YE+P+P  GIHR 
Sbjct: 61  LRSFFTLIMMDPDAPSPSNPYMREYLHWMVTDIPGTTDASFGREIVRYETPKPVAGIHRY 120

Query: 121 VLVLFRQLGRQTV-YAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR 151
           V  LF+Q GRQ V  AP  R+ FNT  F+  + L  PVAAVYFN QRE+    RRR
Sbjct: 121 VFALFKQRGRQAVKAAPETRECFNTNAFSSYFGLSQPVAAVYFNAQRETAP--RRR 174

[Close]

BLAST of Cp4.1LG00g01430 vs. TAIR10
Match: AT5G03840.1 (AT5G03840.1 PEBP (phosphatidylethanolamine-binding protein) family protein)

HSP 1 Score: 160.6 bits (405), Expect = 7.7e-40
Identity = 83/169 (49.11%), Postives = 110/169 (65.09%), Query Frame = 1


Query: 6   DPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDLRTFFT 65
           +PL++GRV+GDV+D FT +  +  +YN +++SNG EL PS V ++PRVEI G DLR+FFT
Sbjct: 10  EPLIMGRVVGDVLDFFTPTTKMNVSYNKKQVSNGHELFPSSVSSKPRVEIHGGDLRSFFT 69

Query: 66  LVMVDPDAPSPS------------------------QEIVCYESPRPTVGIHRLVLVLFR 125
           LVM+DPD P PS                        +E+V YE PRP++GIHR V VLFR
Sbjct: 70  LVMIDPDVPGPSDPFLKEHLHWIVTNIPGTTDATFGKEVVSYELPRPSIGIHRFVFVLFR 129

Query: 126 QLGRQTVY--APGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGR 149
           Q  R+ ++   P  R +FNTR FA  Y+LGLPVAAV+FN QRE+ +  R
Sbjct: 130 QKQRRVIFPNIPS-RDHFNTRKFAVEYDLGLPVAAVFFNAQRETAARKR 177

[Close]

BLAST of Cp4.1LG00g01430 vs. TAIR10
Match: AT2G27550.1 (AT2G27550.1 centroradialis)

HSP 1 Score: 155.6 bits (392), Expect = 2.5e-38
Identity = 82/171 (47.95%), Postives = 111/171 (64.91%), Query Frame = 1


Query: 6   DPLVVGRVIGDVIDSFTRSISIRATYNN-REISNGCELKPSQVVNQPRVEIGGTDLRTFF 65
           DPL+VGRVIGDV+D+  +++ +  TYN+ +++ NG EL PS V  +P+VE+ G D+R+FF
Sbjct: 7   DPLMVGRVIGDVVDNCLQAVKMTVTYNSDKQVYNGHELFPSVVTYKPKVEVHGGDMRSFF 66

Query: 66  TLVMVDPDAPSPS------------------------QEIVCYESPRPTVGIHRLVLVLF 125
           TLVM DPD P PS                        +EI+ YE PRP +GIHR V +LF
Sbjct: 67  TLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDVSFGKEIIGYEMPRPNIGIHRFVYLLF 126

Query: 126 RQLGRQTVYA-PGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR 151
           +Q  R +V + P +R  FNTR+FA   +LGLPVAAV+FNCQRE+ +  RRR
Sbjct: 127 KQTRRGSVVSVPSYRDQFNTREFAHENDLGLPVAAVFFNCQRETAA--RRR 175

[Close]

BLAST of Cp4.1LG00g01430 vs. NCBI nr
Match: gi|149127110|gb|ABR20499.1| (FTL2 [Cucurbita moschata])

HSP 1 Score: 308.1 bits (788), Expect = 8.5e-81
Identity = 154/179 (86.03%), Postives = 155/179 (86.59%), Query Frame = 1


Query: 1   MPRDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60
           MPRDRDPLV+GRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL
Sbjct: 1   MPRDRDPLVIGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPS------------------------QEIVCYESPRPTVGIHRLV 120
           RTFFTLVMVDPDAPSPS                        QEIVCYESPRPTVGIHRLV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF 156
           LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF 179

[Close]

BLAST of Cp4.1LG00g01430 vs. NCBI nr
Match: gi|115343291|gb|ABI94606.1| (flowering locus T-like 2 [Cucurbita maxima])

HSP 1 Score: 306.2 bits (783), Expect = 3.2e-80
Identity = 153/179 (85.47%), Postives = 155/179 (86.59%), Query Frame = 1


Query: 1   MPRDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60
           MPRDRDPLVVGRVIGDVIDSFT+SISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL
Sbjct: 1   MPRDRDPLVVGRVIGDVIDSFTKSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPS------------------------QEIVCYESPRPTVGIHRLV 120
           RTFFTLVMVDPDAPSPS                        QEIVCYESPRPTVGIHRLV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGANFGQEIVCYESPRPTVGIHRLV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF 156
           LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR+QDDF
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRTQDDF 179

[Close]

BLAST of Cp4.1LG00g01430 vs. NCBI nr
Match: gi|793419578|ref|NP_001292686.1| (protein HEADING DATE 3A [Cucumis sativus])

HSP 1 Score: 291.2 bits (744), Expect = 1.1e-75
Identity = 143/179 (79.89%), Postives = 150/179 (83.80%), Query Frame = 1


Query: 1   MPRDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60
           MPRDRDPLVVGRVIGDV+D F+RSISIR TY+ +E++NGCELKPSQVVNQPRVEIGGTDL
Sbjct: 1   MPRDRDPLVVGRVIGDVVDPFSRSISIRVTYSTKEVNNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPS------------------------QEIVCYESPRPTVGIHRLV 120
           RTFFTLVMVDPDAPSPS                        QEIVCYESPRPTVGIHR V
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRFV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF 156
           LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR QDD+
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRVQDDY 179

[Close]

BLAST of Cp4.1LG00g01430 vs. NCBI nr
Match: gi|700211541|gb|KGN66637.1| (FT-like protein [Cucumis sativus])

HSP 1 Score: 291.2 bits (744), Expect = 1.1e-75
Identity = 143/179 (79.89%), Postives = 150/179 (83.80%), Query Frame = 1


Query: 1   MPRDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60
           MPRDRDPLVVGRVIGDV+D F+RSISIR TY+ +E++NGCELKPSQVVNQPRVEIGGTDL
Sbjct: 1   MPRDRDPLVVGRVIGDVVDPFSRSISIRVTYSTKEVNNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPS------------------------QEIVCYESPRPTVGIHRLV 120
           RTFFTLVMVDPDAPSPS                        QEIVCYESPRPTVGIHR V
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLGEYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRFV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF 156
           LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR QDD+
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRVQDDY 179

[Close]

BLAST of Cp4.1LG00g01430 vs. NCBI nr
Match: gi|672231720|dbj|BAP28173.1| (flowering locus T-like protein [Fagus crenata])

HSP 1 Score: 283.1 bits (723), Expect = 2.9e-73
Identity = 138/174 (79.31%), Postives = 145/174 (83.33%), Query Frame = 1


Query: 1   MPRDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60
           MPRDRDPLVVGRVIGDV+D FTRSIS+RA YNNRE++NGCELKPSQVVNQPRV+IGG DL
Sbjct: 1   MPRDRDPLVVGRVIGDVLDPFTRSISLRANYNNREVNNGCELKPSQVVNQPRVDIGGEDL 60

Query: 61  RTFFTLVMVDPDAPSPS------------------------QEIVCYESPRPTVGIHRLV 120
           RTF+TLVMVDPDAPSPS                        QE+VCYESPRPTVGIHR V
Sbjct: 61  RTFYTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGASFGQEVVCYESPRPTVGIHRFV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR 151
            VLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR
Sbjct: 121 FVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR 174

The following BLAST results are available for this feature:

BLAST of Cp4.1LG00g01430 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HD3A_ORYSJ	2.6e-66	69.01	Protein HEADING DATE 3A OS=Oryza sativa subsp. japonica GN=HD3A PE=1 SV=1	[more]
FT_ARATH	5.7e-61	65.09	Protein FLOWERING LOCUS T OS=Arabidopsis thaliana GN=FT PE=1 SV=2	[more]
HD3B_ORYSJ	3.7e-60	65.48	Protein HEADING DATE 3B OS=Oryza sativa subsp. japonica GN=HD3B PE=2 SV=1	[more]
TSF_ARATH	4.8e-60	65.09	Protein TWIN SISTER of FT OS=Arabidopsis thaliana GN=TSF PE=2 SV=1	[more]
BFT_ARATH	2.8e-39	50.57	Protein BROTHER of FT and TFL 1 OS=Arabidopsis thaliana GN=BFT PE=3 SV=1	[more]

BLAST of Cp4.1LG00g01430 vs. TrEMBL


Match Name	E-value	Identity	Description
A6YE10_CUCMO	5.9e-81	86.03	FTL2 OS=Cucurbita moschata PE=2 SV=1	[more]
A6XN27_CUCMA	2.2e-80	85.47	Flowering locus T-like 2 OS=Cucurbita maxima GN=FTL2 PE=2 SV=1	[more]
A0A0A0M0H5_CUCSA	7.5e-76	79.89	FT-like protein OS=Cucumis sativus GN=Csa_1G651710 PE=4 SV=1	[more]
B9ZYL0_CUCSA	7.5e-76	79.89	FT-like protein OS=Cucumis sativus GN=CsFT PE=2 SV=1	[more]
A0A077K8V1_FAGCR	2.0e-73	79.31	Flowering locus T-like protein OS=Fagus crenata GN=FT PE=2 SV=1	[more]

BLAST of Cp4.1LG00g01430 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G65480.1	3.2e-62	65.09	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]
AT4G20370.1	2.7e-61	65.09	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]
AT5G62040.1	1.6e-40	50.57	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]
AT5G03840.1	7.7e-40	49.11	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]
AT2G27550.1	2.5e-38	47.95	centroradialis	[more]

BLAST of Cp4.1LG00g01430 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|149127110\|gb\|ABR20499.1\|	8.5e-81	86.03	FTL2 [Cucurbita moschata]	[more]
gi\|115343291\|gb\|ABI94606.1\|	3.2e-80	85.47	flowering locus T-like 2 [Cucurbita maxima]	[more]
gi\|793419578\|ref\|NP_001292686.1\|	1.1e-75	79.89	protein HEADING DATE 3A [Cucumis sativus]	[more]
gi\|700211541\|gb\|KGN66637.1\|	1.1e-75	79.89	FT-like protein [Cucumis sativus]	[more]
gi\|672231720\|dbj\|BAP28173.1\|	2.9e-73	79.31	flowering locus T-like protein [Fagus crenata]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0048573	photoperiodism, flowering
GO:0009909	regulation of flower development

Vocabulary: **Molecular Function**
Term	Definition
GO:0008429	phosphatidylethanolamine binding

Vocabulary: **INTERPRO**
Term	Definition
IPR008914	PEBP

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048573	photoperiodism, flowering
biological_process	GO:0009909	regulation of flower development
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008429	phosphatidylethanolamine binding
molecular_function	GO:0004650	polygalacturonase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG00g01430.1	Cp4.1LG00g01430.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008914	Phosphatidylethanolamine-binding protein	GENE3D	G3DSA:3.90.280.10		coord: 78..146 score: 1.3E-20coord: 4..77 score: 2.2
IPR008914	Phosphatidylethanolamine-binding protein	unknown	SSF49777	PEBP-like	coord: 6..146 score: 3.01
None	No IPR available	PANTHER	PTHR11362	PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN	coord: 1..151 score: 2.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG00g01430	Cucsa.356340	Cucumber (Gy14) v1	cgycpeB0927
Cp4.1LG00g01430	CmaCh10G008450	Cucurbita maxima (Rimu)	cmacpeB070
Cp4.1LG00g01430	CmaCh11G009230	Cucurbita maxima (Rimu)	cmacpeB103
Cp4.1LG00g01430	CmoCh11G009450	Cucurbita moschata (Rifu)	cmocpeB079
Cp4.1LG00g01430	CmoCh10G008800	Cucurbita moschata (Rifu)	cmocpeB042
Cp4.1LG00g01430	Cla009504	Watermelon (97103) v1	cpewmB006
Cp4.1LG00g01430	Csa1G651710	Cucumber (Chinese Long) v2	cpecuB000
Cp4.1LG00g01430	MELO3C010015	Melon (DHL92) v3.5.1	cpemeB007
Cp4.1LG00g01430	ClCG03G010250	Watermelon (Charleston Gray)	cpewcgB012
Cp4.1LG00g01430	CSPI01G31940	Wild cucumber (PI 183967)	cpecpiB000
Cp4.1LG00g01430	Lsi06G006660	Bottle gourd (USVL1VR-Ls)	cpelsiB017
Cp4.1LG00g01430	MELO3C010015.2	Melon (DHL92) v3.6.1	cpemedB008
Cp4.1LG00g01430	CsaV3_1G044210	Cucumber (Chinese Long) v3	cpecucB0000
Cp4.1LG00g01430	CsGy1G030950	Cucumber (Gy14) v2	cgybcpeB002
Cp4.1LG00g01430	Carg22713	Silver-seed gourd	carcpeB0756
Cp4.1LG00g01430	Carg17811	Silver-seed gourd	carcpeB1340

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG00g01430	Cp4.1LG18g02360	Cucurbita pepo (Zucchini)	cpecpeB006

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG00g01430	Wax gourd	cpewgoB0018