CsaV3_1G039490 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTTGATCGAGAAGATAATCTTACTAACATTTTCCAATTTTATCACATCCTTAGATAAGAAAAAGTAAATCCAACGATTATGTACTATAAGATATATAGAAAGATTGGAGTTTGGAGTCATATTTGAACAACTTTCCGTGGGCGTGTGGTATATATAAACCCCACAAAAAGGCGCTACTCTCAACAATCGATTTCGCTGGCGGAAAGAATTTTCCAATTCATTTCTTCATTTTCAAATATTGAATCGACGATCTTCTTATGGAAATTGAGAGAGATCAAGGTTCAGAACCCTTGCTCCCGATTCCTGTTTCCACCAGCTCGAATTCAACCCTAGACCATGGGGATTCTACTTCAAGTTCCTACAGCTGGCTTTTCCAGTGCCATGGATTTTGGTACAAACTGTTTCTGATTCTTCCTAGTCTTCTTTTCGTTCTCTACTTGGCATTTCGAGCCAAAAAGAGTTTGTCCAAGCTCTCCAATGGTCGTTCTTATATCATTGTTGCGTATTATGGGACTCTTTGGATTGTCACCTTGCTTAACTTCGCTTGGTGCTTGTTTCAGGTTCGTTTTTTGAATCATTCCTTTAAATGCTAGTTGTTTATCAGTGTTTTTTCTGTTTCTGGTCTTTCTTTTTCTTGGGGGTAGAATATCTTTTTTAATGATTTTATATTGGTTTCTGTAATGGGTACTGGGGAGTTCTCTTCTTCTTTAGATGTATGTAGACAATTTGGAATTCGGTTCTGCAATTGCCTGCTTCATGGTTTCTTTGAAGGAAAAGTTTAGGTTTTGTGGAAGTATGTGGATGTAATGGTTTTCCGTGGGCTTTATTAGACGATGTATTTGACATTTACCTCCTTTCGGTGATTGCTTCAAATTTGGAGTGGACAGATGGTTCTTTTCATTTCTCTTAGGATGGGCAGGTGAACTTTATTTTGGGGAAATGGGTATATCATATGAAACTTATTGTATCATTTTGAGAATTTCAATTTCTTAAATCTTGCTAGAACCCCGATTATAAATTTATCTCTGTAGAAAGCTAGTGAGAGGTGCTGAAGATGCTAAAAAATGAGCGAGCAAATATGTGATTGCTGATAGTCGAGGGACCCATGGAAATATGTGTTAGTCAGCAGGGGTGCGTTGGTAGTTTTTGTAGTATATATGCATGCAAAGAGTGTAAAGGGAGCATCTTTTTGACAATCGATTAGTGGGTTCTAGATAGGTGGGAGCATGCAAAATCTCCCTTAGCTTGTAAGTTCATAATACTCTATTATCGATACAGAACTTCTGGTTCTATCAAAATCTTGCCCACTTTTAATTTTGGGGATGGGTGTCAGGCCTCTTTTGTATGTCAAACTAAAGCATTCAAGGCATACAATGCAATAGAAAGCAAAGAAATATCTATTCTTGGACATTCATACTGCCTTGGGTTTGCATGTTGGTGTTGTGATCAGAATGTTCCAGGAAGGGCTCCTGATCCATCTTGAGAGTACAATATACATAGATATATATAGGTAGAAGCATAATATGTGGTTTTGAAATGTTTATCCATCATGAATTTATGCATATCGTTAAAAGTTACTACATTTTATCAGTTCATCTGGGTACTGGCATATAACTCTCTCTCTCCAACATTTTAGTATGTAAGGATACATAATGATCTGAAAACGTTTCATTGTTCCTGTGCCTTTGTAACTTCCAATGTTATTATCTATATTATCCATAAATTATCGGATAGATGATATGATATATGGTAACTCTCAACCAATATGACTTCTATATTTAGGGTTTAAATGCTTGACTCCTCTGCCCTTGATACCATGTTATTGTCAACATTTTAGCGTGAATCTGCCGTATCTTATTTTCTCTTGTTACTTGATTCTTGTGTTGGGTTCTAATTCTCTATCATACTATTATATACATTTTAGTGTCAGTCTCTGATTCTCTCTATGATGTAAGCTGTCTGGGAGCATAGTGTTTGCTATTACTGTGCCTTAATACTTAGGAGCCAGGTTCCAATATCACACATTGGATCACAGTTACCAACTAATTCAATACTGTGCTATGATTGTTCTAATAATTATTACTAACTTGGATTGTGACAGGGGTGGGAGTGCACCTCTGGAAAAGAATTAGCATGGAATGTCCTGTCCTTAGCCACGACATCTGGAATGCTATTCTTGGAAGTGAGTTTGTTGGCGTTTTTATTTCAAGGAAATCATGTGGGCAGTGTAGAAGCACTTGCACGAACTTTCATCGTGTCAGGAATTTTTGTTGGCCTGGACTTGGTTTTGAAGGTATATCTATGAAATTACTCCCTAGATGAGTCCTTTTCAGGTTGCCTCTAGTCTGGCTCTGGAGAACATTGTATTGAAAATAACAAGTTCTATTTTTTACAAAAGAAAACAGAAAATAACAACATTGTGATATTGGTTCTCTTCTGTTTATGATTGTTGGTAGAAATAGTAGTAGATTGGTCCTTGTCAATTATGCTAAACTTTAACTTGTGTGGGATGTCTATTGAAAATCATGTTGTGTTTTAAATGAAACACTTCTTAAATATATTTACAATTTTCAAAATCATTTTTGATTATGTAACTAAACACCATTAAAAATTTGAAAAAGCTTTTTTATTTGGTTAATTGCATCTTTCACCATTCAAGAAGTTATCAACGTTGAAAATTAGTTATGTTTTTTAGATCGATGCATTACGCTTAGTACGTGTACAAAAGCCCTAGGACCTACTTGAACAAGATCTGTTCTGTATGTTATACTACTTTTTCTTTAGGTTCTAAAGTATGTATACAAGGTGTAATTTTGAATAAAGTGTTCACTTTTTAAATTTTTAAAGAAGGATATTATTGTAGGCACATTAAATTTTCTTGACTCACATGGTCTAGATTTTTCATTTTGAGTTATATATATAAATAGGATTTCTTTGCTATGTTTGAAGGGTTTTGTCAAGAGAATTAAAGGGAGCTTGAGAGAAAGAAACCAAGTTCGTAGTTTATTGTAAAGCTTTTGTACAAGTGACTTTGTTTCTTCTTAACTGAATTTTGGTCTGATTATGCTTTTTGAGTGTCCATCACACACTTCCAACAATCTTAATTCACCTTTAATGTTTCGAGTACACAACTTTTTTGGGGTCTGTATAATATGTTGAACAATTCTTCTTATGTTATTGATCGGTTCTTGCTTTGTCTTCTTTTGTTCTTTCCTCTTTTATTAGGCAATTTATTTGTTTGGGTTTGGAGTTCCATTATTCATATTAAGTGACGACAGTACACATCGAACAAAGTGGAACTTGTGGGTAGTCCACCGTCTGTTGATTACTGCAGCTTATGGTTTTATATTGTTCATGTACCATTCAAGCCATAGAGAGAAATTACCAGGTATAATATCTTTCATTCGTATATGCTTCAATGAGGGTGTTATGTTGAAGTGAGCAGTTACTATTTTACCAATTCTTGTGCAGCAAGACCTGCTTTCTACAGATACGTAGTTATCATGTCCTCTTTGAACGCATTGGCACTGTTTGCTTGTGGGCTCGCTGGAAGTGGAGCTGGTTTTGGTTATTGGTAATCCTAAACTGCAAGGCTAAATCTCCTTTTTTTTTTTGTTTTTTTTTAAAAAAATTTAATTTGGTCTCTACTATTTTGGTTAAATCTCCCTACATTGTTGGATGCGAAAGTAACTTCTTAAAGCCAACTTCTGTGTAATCTTAATAATTAACTTCCACAATTTTGAAAACCTTAGTCTCAGTTTGATAATGATAACTATTTGGTTTACTGTTTTTGAAAATTAAGCCTATTTTCACTCAATTTCTTAGCAAGATTTCAAAAACAAATAAAAGCTTTCAAAACTACTTTTTTTAGTTTTCAATTCAATATTTGGCTTGTTTAGAGGTAAAATGAACGATACCACATGTTTGTGTGTCACCTTGCGATTAATTCAGTTGTTTAAGAAATATAATCAATATATTAAGAAGTTTGACACCCCTACATGTTGGCAATGGCAGAAATGTATGGCAAGATTTAACCAAAATATTGGGATCTAGATTTAATATATTCAAGTTAAAGGGACCAAATTGACATAAAAAAACAGAACTACAAGCACTCCAATGGTGGTTTGACCACTCTTTAATATCTACCAACTTAGAGCTTGTTGTTTTGGATCTATATCATGTTTTGTCTCTGTCTCAGGTTGTATGGTGCCACTCTCATCTGTTATCATGCCTTCTATCTTCCCCTTCTATACGAAAATTTTCTTGCCGACTTCTTCCAGGTTGTTTCATCATATCATCCTACCTCTGCTGTCATTTCCTTTTGGAAGAATTGTCTATTTCTCGATCATATGGCTGTTTGTAATCTTGAGGTTCTTATCATTTTTCTCAGGAGGACGATTTGCATTTGGAGAATGTATACTATTCGGAGATGAAGGACGCTGGTTTCTTTGACACCGATTGGGAGTGAGGATGGCGATTCCGAGGTTCGCTACTTATGTAAATTTACTCGAATATATGTTCATGGTAATGTCTAGTGATGAAGCTAATCTTCAATGTTCTTTGAAATCCTGCCTCTTTCTTTACAAAGATGTGTGTTTGTGGTTTATCAAAGAATTCTTTTATGCTCAATCTGTAAATAAACTAATGTTTGGTAGGAAAAGAAGTAAACAAGTGGAATTGGAATCTCATTATTTACGTTAAATTTCCAATTTGGTTTATACGAAATCCTATAGTTTTCTACTTTTTAAAAGCTTCAA ATGGAAATTGAGAGAGATCAAGGTTCAGAACCCTTGCTCCCGATTCCTGTTTCCACCAGCTCGAATTCAACCCTAGACCATGGGGATTCTACTTCAAGTTCCTACAGCTGGCTTTTCCAGTGCCATGGATTTTGGTACAAACTGTTTCTGATTCTTCCTAGTCTTCTTTTCGTTCTCTACTTGGCATTTCGAGCCAAAAAGAGTTTGTCCAAGCTCTCCAATGGTCGTTCTTATATCATTGTTGCGTATTATGGGACTCTTTGGATTGTCACCTTGCTTAACTTCGCTTGGTGCTTGTTTCAGGGGTGGGAGTGCACCTCTGGAAAAGAATTAGCATGGAATGTCCTGTCCTTAGCCACGACATCTGGAATGCTATTCTTGGAAGTGAGTTTGTTGGCGTTTTTATTTCAAGGAAATCATGTGGGCAGTGTAGAAGCACTTGCACGAACTTTCATCGTGTCAGGAATTTTTGTTGGCCTGGACTTGGTTTTGAAGGCAATTTATTTGTTTGGGTTTGGAGTTCCATTATTCATATTAAGTGACGACAGTACACATCGAACAAAGTGGAACTTGTGGGTAGTCCACCGTCTGTTGATTACTGCAGCTTATGGTTTTATATTGTTCATGTACCATTCAAGCCATAGAGAGAAATTACCAGCAAGACCTGCTTTCTACAGATACGTAGTTATCATGTCCTCTTTGAACGCATTGGCACTGTTTGCTTGTGGGCTCGCTGGAAGTGGAGCTGGTTTTGGTTATTGGTTGTATGGTGCCACTCTCATCTGTTATCATGCCTTCTATCTTCCCCTTCTATACGAAAATTTTCTTGCCGACTTCTTCCAGGAGGACGATTTGCATTTGGAGAATGTATACTATTCGGAGATGAAGGACGCTGGTTTCTTTGACACCGATTGGGAGTGA ATGGAAATTGAGAGAGATCAAGGTTCAGAACCCTTGCTCCCGATTCCTGTTTCCACCAGCTCGAATTCAACCCTAGACCATGGGGATTCTACTTCAAGTTCCTACAGCTGGCTTTTCCAGTGCCATGGATTTTGGTACAAACTGTTTCTGATTCTTCCTAGTCTTCTTTTCGTTCTCTACTTGGCATTTCGAGCCAAAAAGAGTTTGTCCAAGCTCTCCAATGGTCGTTCTTATATCATTGTTGCGTATTATGGGACTCTTTGGATTGTCACCTTGCTTAACTTCGCTTGGTGCTTGTTTCAGGGGTGGGAGTGCACCTCTGGAAAAGAATTAGCATGGAATGTCCTGTCCTTAGCCACGACATCTGGAATGCTATTCTTGGAAGTGAGTTTGTTGGCGTTTTTATTTCAAGGAAATCATGTGGGCAGTGTAGAAGCACTTGCACGAACTTTCATCGTGTCAGGAATTTTTGTTGGCCTGGACTTGGTTTTGAAGGCAATTTATTTGTTTGGGTTTGGAGTTCCATTATTCATATTAAGTGACGACAGTACACATCGAACAAAGTGGAACTTGTGGGTAGTCCACCGTCTGTTGATTACTGCAGCTTATGGTTTTATATTGTTCATGTACCATTCAAGCCATAGAGAGAAATTACCAGCAAGACCTGCTTTCTACAGATACGTAGTTATCATGTCCTCTTTGAACGCATTGGCACTGTTTGCTTGTGGGCTCGCTGGAAGTGGAGCTGGTTTTGGTTATTGGTTGTATGGTGCCACTCTCATCTGTTATCATGCCTTCTATCTTCCCCTTCTATACGAAAATTTTCTTGCCGACTTCTTCCAGGAGGACGATTTGCATTTGGAGAATGTATACTATTCGGAGATGAAGGACGCTGGTTTCTTTGACACCGATTGGGAGTGA MEIERDQGSEPLLPIPVSTSSNSTLDHGDSTSSSYSWLFQCHGFWYKLFLILPSLLFVLYLAFRAKKSLSKLSNGRSYIIVAYYGTLWIVTLLNFAWCLFQGWECTSGKELAWNVLSLATTSGMLFLEVSLLAFLFQGNHVGSVEALARTFIVSGIFVGLDLVLKAIYLFGFGVPLFILSDDSTHRTKWNLWVVHRLLITAAYGFILFMYHSSHREKLPARPAFYRYVVIMSSLNALALFACGLAGSGAGFGYWLYGATLICYHAFYLPLLYENFLADFFQEDDLHLENVYYSEMKDAGFFDTDWE
BLAST of CsaV3_1G039490 vs. NCBI nr
Match: XP_011659933.1 (PREDICTED: transmembrane protein adipocyte-associated 1 [Cucumis sativus] >KGN66139.1 hypothetical protein Csa_1G573580 [Cucumis sativus]) HSP 1 Score: 615.9 bits (1587), Expect = 7.3e-173 Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0
BLAST of CsaV3_1G039490 vs. NCBI nr
Match: XP_008450734.1 (PREDICTED: transmembrane protein adipocyte-associated 1 [Cucumis melo]) HSP 1 Score: 601.7 bits (1550), Expect = 1.4e-168 Identity = 296/306 (96.73%), Postives = 304/306 (99.35%), Query Frame = 0
BLAST of CsaV3_1G039490 vs. NCBI nr
Match: XP_022961474.1 (uncharacterized protein LOC111462043 [Cucurbita moschata]) HSP 1 Score: 582.0 bits (1499), Expect = 1.2e-162 Identity = 281/306 (91.83%), Postives = 299/306 (97.71%), Query Frame = 0
BLAST of CsaV3_1G039490 vs. NCBI nr
Match: XP_022968770.1 (transmembrane protein adipocyte-associated 1 [Cucurbita maxima]) HSP 1 Score: 581.6 bits (1498), Expect = 1.5e-162 Identity = 282/306 (92.16%), Postives = 300/306 (98.04%), Query Frame = 0
BLAST of CsaV3_1G039490 vs. NCBI nr
Match: XP_022158888.1 (transmembrane protein adipocyte-associated 1-like [Momordica charantia]) HSP 1 Score: 580.5 bits (1495), Expect = 3.4e-162 Identity = 282/306 (92.16%), Postives = 296/306 (96.73%), Query Frame = 0
BLAST of CsaV3_1G039490 vs. TAIR10
Match: AT3G05010.1 (Protein of unknown function, transmembrane-40) HSP 1 Score: 394.8 bits (1013), Expect = 4.8e-110 Identity = 184/270 (68.15%), Postives = 222/270 (82.22%), Query Frame = 0
BLAST of CsaV3_1G039490 vs. TAIR10
Match: AT5G27210.1 (Protein of unknown function, transmembrane-40) HSP 1 Score: 377.1 bits (967), Expect = 1.0e-104 Identity = 178/278 (64.03%), Postives = 219/278 (78.78%), Query Frame = 0
BLAST of CsaV3_1G039490 vs. Swiss-Prot
Match: sp|Q60QP4|TPRA1_CAEBR (Transmembrane protein adipocyte-associated 1 homolog OS=Caenorhabditis briggsae OX=6238 GN=tpra-1 PE=3 SV=2) HSP 1 Score: 49.7 bits (117), Expect = 6.8e-05 Identity = 59/244 (24.18%), Postives = 105/244 (43.03%), Query Frame = 0
BLAST of CsaV3_1G039490 vs. TrEMBL
Match: tr|A0A0A0LYM1|A0A0A0LYM1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G573580 PE=4 SV=1) HSP 1 Score: 615.9 bits (1587), Expect = 4.8e-173 Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0
BLAST of CsaV3_1G039490 vs. TrEMBL
Match: tr|A0A1S3BQX4|A0A1S3BQX4_CUCME (transmembrane protein adipocyte-associated 1 OS=Cucumis melo OX=3656 GN=LOC103492224 PE=4 SV=1) HSP 1 Score: 601.7 bits (1550), Expect = 9.4e-169 Identity = 296/306 (96.73%), Postives = 304/306 (99.35%), Query Frame = 0
BLAST of CsaV3_1G039490 vs. TrEMBL
Match: tr|A0A2I4GNC8|A0A2I4GNC8_9ROSI (transmembrane protein adipocyte-associated 1-like OS=Juglans regia OX=51240 GN=LOC109009402 PE=4 SV=1) HSP 1 Score: 451.4 bits (1160), Expect = 1.6e-123 Identity = 215/294 (73.13%), Postives = 250/294 (85.03%), Query Frame = 0
BLAST of CsaV3_1G039490 vs. TrEMBL
Match: tr|A0A2P4KEE4|A0A2P4KEE4_QUESU (Transmembrane protein adipocyte-associated 1 OS=Quercus suber OX=58331 GN=CFP56_51810 PE=4 SV=1) HSP 1 Score: 448.4 bits (1152), Expect = 1.3e-122 Identity = 207/272 (76.10%), Postives = 239/272 (87.87%), Query Frame = 0
BLAST of CsaV3_1G039490 vs. TrEMBL
Match: tr|M5VZC6|M5VZC6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G335200 PE=4 SV=1) HSP 1 Score: 447.6 bits (1150), Expect = 2.3e-122 Identity = 217/306 (70.92%), Postives = 253/306 (82.68%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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