CmaCh10G010960 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGGCGACGTATATTGCCCAAAGGCCGCTGCCCGCAACATCCATTTCTCTCCAACAATATTTTCCAATTCATCTCTTCATTTTTCAAATCTCGAATCCATAATTCTCCTTTTTTTTTTCCATTTCCCGCTGTTCTTCTTGTAATTTCCTTCGATTTGAACCAAAAAAGTTATGGAAATTCCAACAGATCGAGGTTCAGAACCCCTGCTTCCGATCCCTGTTTCGACGACTTCGAACTCAACCCTAGACCATGTGAATTCTACTCCCACTGCCTACAGTTGGCTATTCGAGTGCCATGGATTTTGGTACAAACTGTTTCTGATTGTCCCCAGTTTGCTATTCGTTCTGTACTTGGCATTTCGGGCGAGAAAGAGCTTGTCCAAGCTCTCCAATGGTCGCTCTTATATCATAGTTGCATATTACGGGACTCTCTGGATCGTTACCTTGCTCAACTTCGCTTGGTGCATGTTTCAGGTTCTTTCATTTTATTAACTTTTTCTTCGGGGAATGAGATCTCCAAGAACCCCTGTAGTATTGAACAATGAAATCTTAGCTTCTGTAATGGCGATGGGGGAGTCTTTTCTTTATCAAATGTATGCATAGAATTTGGAATTCGGTTCTGCAATTGTGTGCTCCATTTTTGAGCTTTAGATATCATTATGCTGCTTCCGTGTGCTGATAAGTTTAGGTTCTATGGCAGTATGTGGTAAATGCAATAGGAAACTTTAGGGATATAATGCTTTTCCTTGAATCTTGCCCCCTTTAAGTAATTGCTTCAAATTTGGACGGTTTGGTTTTTAATTCTCCTAGAGTGGGCGTGTGAATTGCATTTTGTGAATTTGTGAGGCTTTCGCAAGAAATGGGTTGTTGAGGATTGTTGGAAGGGAGTTCTACATTGGCTAATATAAGGAATGATCATGAGTTTATAAATAAGGAATATATCTCCATTGGTATGAGGCATTTTGAGGAAGCCCGAGCTTCTGCTCAAAGGAGACAATATTATACCATTGTGTAGAGTCGTGATTCTTAACATGGGTATGTTATTTGAAACTTATTGTATCGTTCTAAAACTTCAATTTCTTAAATGGAAAGTTCCGTATTTGTTTCGTAAAATCTTGATAGACCCCGAATTATAAATATGTATCAATAGAAAGATAGCGAGAGGAGCTGAAGAGGCTAAGAAATGAGCGAGCGAATATGTGATGAGTGGTGGAACCCATGGAAATATTTGTTGATCAGCAGGGTTGCGTTAGTAGATTCTGTAGTAGATATATATATATGCAAAGAGTGTAGAGGGAAGCGTCGTTTTGACTATCAATTAGTGGGTTCTAGAGAGGCGGAAAGATAGCAAGAGGAGCTGAAGAGGCTAAGAAATGAGCGAGCGAATATGTGATTAGTGGTGGAACCCATGGAAATATTTGTTGGGCAGCAGGGTTGCGTTAGTAGATTCTGTAGTAGATATATAAATGCAAAGAGTGTAGAGGGAAGCGTCGTCTTGACTATCGATTACTGGGTTCTAGAGAGGTGGGAAAGGTAGCGAGAGGAGCTGAAGAGGCTAAAAAATGAGCGAGCGAATATGTGATTAGTGGTGGAACCCATGGAAATATTTGTTGGTCAGCAGGGTTGCGTTAGTAGGTTCTCTAGTAGATATATATGCAAAGAGTATAGAGGGAGGCGTCGTTTTAACTATCGATTTGTGGGTTCTATAGAGGCGGGAGCTCGCAAAATCTCCCTTAGCTTGTAAGTTCGTAACTCGGATTATCAATGCAGAATTAATTCCATTCTTCTGGTTCCATCAAATCTTTCCCACTTTTAATTTTGGTAATACTATCGTGTCTCTTTTGTATGTCAAACTAAAGCTAAATTTGAATTTTCTCAAAACTATTCAAGGATTAGTATATGATAGAAAGCAAAAAGATATCTAGAATATATATAGATAGCTACATAATGTGTGGTTTAGAAATGGTTACAACGTTTATTTTACATTTATTTATCCAATATCCTCTACCATTTCTATTTTCATATCATTTCAGTACCTAAATTCTGGCTGCTTGACTCCTCTTCCCGTGACCGCCGTGTTTTTTGTCAATATTTTAGTGTGAATCTGTGACCCCACCCATATCTATATGTCTCTCATTTTCCTCCATAAATGCTGGTTGCTTGATTCCTGTGTTCTTGTCCTCTGTCATGTTGTTATATACATTTTCATGTGAATCTTACTATGATGTAAGCTGTGACTGGAGCACAGTGTTTGTAATTACTGTGTCCAGATACTCAAGCCAAGTTCCAATATCATCCATTGGATTACAATTACCAATTAATTCAATTCTGTAGTTTGATTTGTCTGATAATCATTACCAACTTGGATTAAACAGGCATGGGAATGCACCTCTGGGAAAGAATTAGCATGGAATATCTTGTCCTTATCCACGACATCGGGAATGCTATTCTTGGAAGTCAGTTTGTTGGCCTTTTTATATCAAGGAAATCATGTGGGCAGCGTAGAAGCCCTCGCACGAACTTTCATCGTGTCAGGAATTTTTGTTGGCCTGGACTTGATTCTGAAGGTATATCCAAGAAAATACTCCCAAATGACTCCTTTTCAGGTGCCTCTAGGTCTGCCCCTGGAGAACATTCTGATAGAAAAGCAAAAGTTTGATGTTTTAAAAAGGAGAAAACCAGCTGAAAATTAGACGTGTTTTTAATTTGAGATACATACGCTTAGTACGTATACAGTGACTAGTTTTAATTGAATATCCATTTACATAATTTTTAGAGATGGATTAATTGTAGGTACATTTATGTTCGGGTGCATCGGATGGAAGTTAATATAGGGTCTAGATATTTCATTTCGAGTTCTATATATACATAGGATTTCTTTGCAGTGTTTAAAGTGTTTGGATGTTCGATTATGTTTTTCAAGTACACAATTTTTTTGGAGGGCTGTATAACGTGTGGAACGATTCTTCTTACGTTACTGATTCATTCTTGCCTTGCCTTTGTTTGTTCATTCCTTTTTTAGGCAATTTATTTGTTTGGGTTCGGAGTTCCATTATTCATTTTAAGTGACGACAGTAAGCATCGAACAAAGTGGAACTTGTGGGTCGTCCACCGTCTGTTGATTACTGCAGCGTATGGTTTTATATTGTTCATGTACCATTCAAGCCATAGAGAGAAATTACCAGGTATAATATCTTTCCTCTGTATGCATCAATGAACTGTATTATCTTGCAGTGAGTTTTCACTCTTTTATCAATTCTTCTGCAGCAAGACCTGCTTTCTACAGATACGTCGTTATCATGTCGTCTTTGAACGCATTGGCACTCTTTGCTTGCGGGATCGCTGGAAATGGAGCTGGTTTTGGCTATTGGTAAGGGCAGCATGATTAAATCCTCCATTGTGCTTAGTTTGATTTTAATTTGGTCTTTACGGTTTTGGTTAAATCTCCCAAAGTTGTTGGAAGGGTCGGAATTGGCTCCAAAATTTGAGAGAACTCTGCATTTTTTCAGCAAGTGTTCAAGTTTTTACTCGGGTTAAACTATTACATTTGGGATAATACACGCAACACACGTTGCGTGGTAACTCATTGTCACTCATGGCCGCTTTCTCCCATTCAAAGAAAAGTAAACACTACTTGATTATTTAGTTTGAGCATAACTCAACTAGTTAAGACATGTATCCTCGATCAATAGGTCAGAAGTTTGAACTCAAATGTTAATACACACACCACACGTTGCATGGTAGCTCATTGTCTCTCATGGCTGCTTTCTCCCGTTCGAAGAAATGTAGACACTACTTGATTATTTAATTTGAGCATAACTCAACTAGTTAAGACATGTATCCTCGATCAATAGGTCAGAAGTTTGAACTCGAATGTAATTTAACCTCTTTGTAATATCTACTAGATTCGAGCTGGTCATTTTGATGGTATATCATGTTTGTTTTTGTCCCAGGTTGTATGGTGCCACTGTCGTCTGTTATCATGCCTTCTATCTTCCCCTTCTATATGAACATTTTCTTGCCGACTTCTTCCAGGTTGTTTCACCATATCATTCTACCTTCACAGTTATTTCCGCTATTTTTCGATCAAAAGGACGTTTGTAATCTCGAGATCTGTATTGCTTTTTCAGGAGGACGATTTGCATTTGGAGAACGTATACTATTCGGAGATGAAGGATGCTGGTTTCTTTGACACTGACTGGGAGTGAGGATGGCGATTCCATACGTAACGAAAGAGCTTCGTTGCTTATGTATGTAAATTTACTCGAACATATATATTAACGGTGTTGCAAGATGCAGGTATGAATTTGGAGTGAGATTTCTGTCTCTACTGATCAGATCAATCTTATAGTCTTCACTGTTCTTGAAATCCTGCATCTTTCTTTACAAGAATGTGTGTTTGTGTTTATCTGAGGATTCTCATATGGTAGATCTGTAAATAAATTGCTATTAGCAGCAAAAATAAACAGATAGGATTGGGATATCAATTTGGTTCATTCAAGCTTAGAG CGGCGACGTATATTGCCCAAAGGCCGCTGCCCGCAACATCCATTTCTCTCCAACAATATTTTCCAATTCATCTCTTCATTTTTCAAATCTCGAATCCATAATTCTCCTTTTTTTTTTCCATTTCCCGCTGTTCTTCTTGTAATTTCCTTCGATTTGAACCAAAAAAGTTATGGAAATTCCAACAGATCGAGGTTCAGAACCCCTGCTTCCGATCCCTGTTTCGACGACTTCGAACTCAACCCTAGACCATGTGAATTCTACTCCCACTGCCTACAGTTGGCTATTCGAGTGCCATGGATTTTGGTACAAACTGTTTCTGATTGTCCCCAGTTTGCTATTCGTTCTGTACTTGGCATTTCGGGCGAGAAAGAGCTTGTCCAAGCTCTCCAATGGTCGCTCTTATATCATAGTTGCATATTACGGGACTCTCTGGATCGTTACCTTGCTCAACTTCGCTTGGTGCATGTTTCAGGCATGGGAATGCACCTCTGGGAAAGAATTAGCATGGAATATCTTGTCCTTATCCACGACATCGGGAATGCTATTCTTGGAAGTCAGTTTGTTGGCCTTTTTATATCAAGGAAATCATGTGGGCAGCGTAGAAGCCCTCGCACGAACTTTCATCGTGTCAGGAATTTTTGTTGGCCTGGACTTGATTCTGAAGGCAATTTATTTGTTTGGGTTCGGAGTTCCATTATTCATTTTAAGTGACGACAGTAAGCATCGAACAAAGTGGAACTTGTGGGTCGTCCACCGTCTGTTGATTACTGCAGCGTATGGTTTTATATTGTTCATGTACCATTCAAGCCATAGAGAGAAATTACCAGCAAGACCTGCTTTCTACAGATACGTCGTTATCATGTCGTCTTTGAACGCATTGGCACTCTTTGCTTGCGGGATCGCTGGAAATGGAGCTGGTTTTGGCTATTGGTTGTATGGTGCCACTGTCGTCTGTTATCATGCCTTCTATCTTCCCCTTCTATATGAACATTTTCTTGCCGACTTCTTCCAGGAGGACGATTTGCATTTGGAGAACGTATACTATTCGGAGATGAAGGATGCTGGTTTCTTTGACACTGACTGGGAGTGAGGATGGCGATTCCATACGTAACGAAAGAGCTTCGTTGCTTATGTATGTAAATTTACTCGAACATATATATTAACGGTGTTGCAAGATGCAGGTATGAATTTGGAGTGAGATTTCTGTCTCTACTGATCAGATCAATCTTATAGTCTTCACTGTTCTTGAAATCCTGCATCTTTCTTTACAAGAATGTGTGTTTGTGTTTATCTGAGGATTCTCATATGGTAGATCTGTAAATAAATTGCTATTAGCAGCAAAAATAAACAGATAGGATTGGGATATCAATTTGGTTCATTCAAGCTTAGAG ATGGAAATTCCAACAGATCGAGGTTCAGAACCCCTGCTTCCGATCCCTGTTTCGACGACTTCGAACTCAACCCTAGACCATGTGAATTCTACTCCCACTGCCTACAGTTGGCTATTCGAGTGCCATGGATTTTGGTACAAACTGTTTCTGATTGTCCCCAGTTTGCTATTCGTTCTGTACTTGGCATTTCGGGCGAGAAAGAGCTTGTCCAAGCTCTCCAATGGTCGCTCTTATATCATAGTTGCATATTACGGGACTCTCTGGATCGTTACCTTGCTCAACTTCGCTTGGTGCATGTTTCAGGCATGGGAATGCACCTCTGGGAAAGAATTAGCATGGAATATCTTGTCCTTATCCACGACATCGGGAATGCTATTCTTGGAAGTCAGTTTGTTGGCCTTTTTATATCAAGGAAATCATGTGGGCAGCGTAGAAGCCCTCGCACGAACTTTCATCGTGTCAGGAATTTTTGTTGGCCTGGACTTGATTCTGAAGGCAATTTATTTGTTTGGGTTCGGAGTTCCATTATTCATTTTAAGTGACGACAGTAAGCATCGAACAAAGTGGAACTTGTGGGTCGTCCACCGTCTGTTGATTACTGCAGCGTATGGTTTTATATTGTTCATGTACCATTCAAGCCATAGAGAGAAATTACCAGCAAGACCTGCTTTCTACAGATACGTCGTTATCATGTCGTCTTTGAACGCATTGGCACTCTTTGCTTGCGGGATCGCTGGAAATGGAGCTGGTTTTGGCTATTGGTTGTATGGTGCCACTGTCGTCTGTTATCATGCCTTCTATCTTCCCCTTCTATATGAACATTTTCTTGCCGACTTCTTCCAGGAGGACGATTTGCATTTGGAGAACGTATACTATTCGGAGATGAAGGATGCTGGTTTCTTTGACACTGACTGGGAGTGA MEIPTDRGSEPLLPIPVSTTSNSTLDHVNSTPTAYSWLFECHGFWYKLFLIVPSLLFVLYLAFRARKSLSKLSNGRSYIIVAYYGTLWIVTLLNFAWCMFQAWECTSGKELAWNILSLSTTSGMLFLEVSLLAFLYQGNHVGSVEALARTFIVSGIFVGLDLILKAIYLFGFGVPLFILSDDSKHRTKWNLWVVHRLLITAAYGFILFMYHSSHREKLPARPAFYRYVVIMSSLNALALFACGIAGNGAGFGYWLYGATVVCYHAFYLPLLYEHFLADFFQEDDLHLENVYYSEMKDAGFFDTDWE
BLAST of CmaCh10G010960 vs. Swiss-Prot
Match: TPRA1_MOUSE (Transmembrane protein adipocyte-associated 1 OS=Mus musculus GN=Tpra1 PE=2 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.6e-06 Identity = 60/275 (21.82%), Postives = 113/275 (41.09%), Query Frame = 1
BLAST of CmaCh10G010960 vs. Swiss-Prot
Match: TPRA1_RAT (Transmembrane protein adipocyte-associated 1 OS=Rattus norvegicus GN=Tpra1 PE=2 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.6e-06 Identity = 60/275 (21.82%), Postives = 113/275 (41.09%), Query Frame = 1
BLAST of CmaCh10G010960 vs. TrEMBL
Match: A0A0A0LYM1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G573580 PE=4 SV=1) HSP 1 Score: 582.4 bits (1500), Expect = 3.2e-163 Identity = 282/306 (92.16%), Postives = 300/306 (98.04%), Query Frame = 1
BLAST of CmaCh10G010960 vs. TrEMBL
Match: M5VZC6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009124mg PE=4 SV=1) HSP 1 Score: 446.8 bits (1148), Expect = 2.1e-122 Identity = 219/298 (73.49%), Postives = 248/298 (83.22%), Query Frame = 1
BLAST of CmaCh10G010960 vs. TrEMBL
Match: W9R458_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_010228 PE=4 SV=1) HSP 1 Score: 445.3 bits (1144), Expect = 6.1e-122 Identity = 213/298 (71.48%), Postives = 249/298 (83.56%), Query Frame = 1
BLAST of CmaCh10G010960 vs. TrEMBL
Match: A0A061F0T3_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_025954 PE=4 SV=1) HSP 1 Score: 439.1 bits (1128), Expect = 4.4e-120 Identity = 209/286 (73.08%), Postives = 241/286 (84.27%), Query Frame = 1
BLAST of CmaCh10G010960 vs. TrEMBL
Match: A0A067JVN9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23427 PE=4 SV=1) HSP 1 Score: 437.2 bits (1123), Expect = 1.7e-119 Identity = 211/297 (71.04%), Postives = 246/297 (82.83%), Query Frame = 1
BLAST of CmaCh10G010960 vs. TAIR10
Match: AT3G05010.1 (AT3G05010.1 Protein of unknown function, transmembrane-40) HSP 1 Score: 393.7 bits (1010), Expect = 1.1e-109 Identity = 183/270 (67.78%), Postives = 223/270 (82.59%), Query Frame = 1
BLAST of CmaCh10G010960 vs. TAIR10
Match: AT5G27210.1 (AT5G27210.1 Protein of unknown function, transmembrane-40) HSP 1 Score: 376.7 bits (966), Expect = 1.3e-104 Identity = 178/278 (64.03%), Postives = 216/278 (77.70%), Query Frame = 1
BLAST of CmaCh10G010960 vs. NCBI nr
Match: gi|778662647|ref|XP_011659933.1| (PREDICTED: transmembrane protein adipocyte-associated 1 [Cucumis sativus]) HSP 1 Score: 582.4 bits (1500), Expect = 4.6e-163 Identity = 282/306 (92.16%), Postives = 300/306 (98.04%), Query Frame = 1
BLAST of CmaCh10G010960 vs. NCBI nr
Match: gi|659099701|ref|XP_008450734.1| (PREDICTED: uncharacterized protein LOC103492224 [Cucumis melo]) HSP 1 Score: 575.1 bits (1481), Expect = 7.3e-161 Identity = 279/306 (91.18%), Postives = 299/306 (97.71%), Query Frame = 1
BLAST of CmaCh10G010960 vs. NCBI nr
Match: gi|657992726|ref|XP_008388619.1| (PREDICTED: uncharacterized protein LOC103450983 [Malus domestica]) HSP 1 Score: 447.6 bits (1150), Expect = 1.8e-122 Identity = 217/306 (70.92%), Postives = 253/306 (82.68%), Query Frame = 1
BLAST of CmaCh10G010960 vs. NCBI nr
Match: gi|645222388|ref|XP_008218143.1| (PREDICTED: uncharacterized protein LOC103318532 [Prunus mume]) HSP 1 Score: 447.2 bits (1149), Expect = 2.3e-122 Identity = 219/298 (73.49%), Postives = 248/298 (83.22%), Query Frame = 1
BLAST of CmaCh10G010960 vs. NCBI nr
Match: gi|595826751|ref|XP_007205623.1| (hypothetical protein PRUPE_ppa009124mg [Prunus persica]) HSP 1 Score: 446.8 bits (1148), Expect = 3.0e-122 Identity = 219/298 (73.49%), Postives = 248/298 (83.22%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|