CsaV3_1G038990 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G038990
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionGlycoprotein membrane GPI-anchored protein
Locationchr1 : 24550345 .. 24551915 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATATTATTTATTGCTTTTGGGTCTTTGGGAGAGTTCAATTTGTTTTTCATTGTTACTCACAAATTTTGATGGCCAATTCTCTCTTTAGATTGTTCACTTTATTCTTCTTTGTTCTCATTTCCATCTTCCTCCTTCATCCCAATGTTGTTCTCTGTGATGGTACTGATCTCTCTCTCTCTCTCTCATGAAAATTTCAAAAGGAAAAAAAATCTTGATTTTCTTTTTTCATTCTTCACTCAAACATGAGTTTATGTTTGTTTTAATTTCCATAATTTTCATCATTCTTTTCTTTTAAAATGCTTGTCCATCCATCTCGATTTTCTTTTGTTTAAGAGTATGGATGATCGACTTTCTTTTGTTTAAGAGTATGGATTGGAAGTGGTTATAAAATTGTTGAAATAACTCTAAAACATGATTTTAATAAATCTAAACCAATTCTTATTATATGAAACCACGTTTCCTAAAATTTAGAATGAATGTATAATTTTGTTTAGTTCATGTTATAAGTATATTTTCAGTTTTGAAGTATGAAGTATGAACAAAAAGTTAAAACTAAAATTCCAAAACCAAAAAACAAGTTTTGAATAACATTTTTTGTTACTAATTTTCAAAAAAAAATTTGTAGAGTTTTTGAAACCATTTGGTAAACAAATTAAGAACTTTCGAGAGATAAAACTGAAAAACAAAAAACAAAATAGGGTCATTAAATTTACCTCAACATAAACCAACGAGAACCTAACCATATCGGCCCCGACATGGCCACTTTTTGATTTTTTGCAGTGAAAGATGATAACATTCTAAATGCCATTAACGAATATAGGGAATCAAAGAATCTATCAAGGCTTTCTTATAACAGAAATGCAGCATGTTTGGCTGGTAAACTCGTTTATAAGCTAAGAGATGAGCCTTGTTCAAGTGCTGAAAATTTCAACAAAGAAATTAGCTCAGAAACTAAGCTTGCAGATTTCCCTAAGCTCTTACGAAAATGTCACATAGCCTACAACTCCTCCGTTGACGGCATCATTCTCCCCTCTTGCGTCCGTGGACTCGATGCTATATCTGTCACCAGTAACTACACCCGTTCCCACGACGGCGAGTATATCAACGATCAGAACTATACTGGTGCTGGGGTTGGGACGATTGACGATGCTTGGGTTGTTCTCATTCTTAGCACCAACACCTCAACTGGGAACTATGACAACAGTGGATCATCGTCTTTGGTTGTTGCTGGAGGTGGTCATATTGGTGTGATGGTTGCATTGTTAGGGATGTTTGTTTCATCTTTGTTATTTTGATTTTCTTTTCTTGGGTTGAGTCTTGATCTCAAGCTTGTAAAAGGTCTTTGGTTTTGGGTTTTATGCATTGTATTTGTCATGAACTGTTGATATATTTGTTGTCTTTTTACTGATTCTCCTGAGTTAATCAGTACAGTTTATATATATAATCAAAATTTGGGCAATTTACTCCTTAGCAACTGTTATTGTTAATTCGATTACACTTAGTGTTCATTCTTTTCTCACTATTCACATAAAATACTTTAAAAAGTAGTAAAACATTTCACTGTTCACT

mRNA sequence

ATGGCCAATTCTCTCTTTAGATTGTTCACTTTATTCTTCTTTGTTCTCATTTCCATCTTCCTCCTTCATCCCAATGTTGTTCTCTGTGATGTGAAAGATGATAACATTCTAAATGCCATTAACGAATATAGGGAATCAAAGAATCTATCAAGGCTTTCTTATAACAGAAATGCAGCATGTTTGGCTGGTAAACTCGTTTATAAGCTAAGAGATGAGCCTTGTTCAAGTGCTGAAAATTTCAACAAAGAAATTAGCTCAGAAACTAAGCTTGCAGATTTCCCTAAGCTCTTACGAAAATGTCACATAGCCTACAACTCCTCCGTTGACGGCATCATTCTCCCCTCTTGCGTCCGTGGACTCGATGCTATATCTGTCACCAGTAACTACACCCGTTCCCACGACGGCGAGTATATCAACGATCAGAACTATACTGGTGCTGGGGTTGGGACGATTGACGATGCTTGGGTTGTTCTCATTCTTAGCACCAACACCTCAACTGGGAACTATGACAACAGTGGATCATCGTCTTTGGTTGTTGCTGGAGGTGGTCATATTGGTGTGATGGTTGCATTGTTAGGGATGTTTGTTTCATCTTTGTTATTTTGA

Coding sequence (CDS)

ATGGCCAATTCTCTCTTTAGATTGTTCACTTTATTCTTCTTTGTTCTCATTTCCATCTTCCTCCTTCATCCCAATGTTGTTCTCTGTGATGTGAAAGATGATAACATTCTAAATGCCATTAACGAATATAGGGAATCAAAGAATCTATCAAGGCTTTCTTATAACAGAAATGCAGCATGTTTGGCTGGTAAACTCGTTTATAAGCTAAGAGATGAGCCTTGTTCAAGTGCTGAAAATTTCAACAAAGAAATTAGCTCAGAAACTAAGCTTGCAGATTTCCCTAAGCTCTTACGAAAATGTCACATAGCCTACAACTCCTCCGTTGACGGCATCATTCTCCCCTCTTGCGTCCGTGGACTCGATGCTATATCTGTCACCAGTAACTACACCCGTTCCCACGACGGCGAGTATATCAACGATCAGAACTATACTGGTGCTGGGGTTGGGACGATTGACGATGCTTGGGTTGTTCTCATTCTTAGCACCAACACCTCAACTGGGAACTATGACAACAGTGGATCATCGTCTTTGGTTGTTGCTGGAGGTGGTCATATTGGTGTGATGGTTGCATTGTTAGGGATGTTTGTTTCATCTTTGTTATTTTGA

Protein sequence

MANSLFRLFTLFFFVLISIFLLHPNVVLCDVKDDNILNAINEYRESKNLSRLSYNRNAACLAGKLVYKLRDEPCSSAENFNKEISSETKLADFPKLLRKCHIAYNSSVDGIILPSCVRGLDAISVTSNYTRSHDGEYINDQNYTGAGVGTIDDAWVVLILSTNTSTGNYDNSGSSSLVVAGGGHIGVMVALLGMFVSSLLF
Homology
[Close]
BLAST of CsaV3_1G038990 vs. NCBI nr
Match: XP_004135621.1 (PREDICTED: uncharacterized GPI-anchored protein At5g19250-like [Cucumis sativus])

HSP 1 Score: 392.1 bits (1006), Expect = 1.1e-105
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0 

Query: 1   MANSLFRLFTLFFFVLISIFLLHPNVVLCDVKDDNILNAINEYRESKNLSRLSYNRNAAC 60
           MANSLFRLFTLFFFVLISIFLLHPNVVLCDVKDDNILNAINEYRESKNLSRLSYNRNAAC
Sbjct: 1   MANSLFRLFTLFFFVLISIFLLHPNVVLCDVKDDNILNAINEYRESKNLSRLSYNRNAAC 60

Query: 61  LAGKLVYKLRDEPCSSAENFNKEISSETKLADFPKLLRKCHIAYNSSVDGIILPSCVRGL 120
           LAGKLVYKLRDEPCSSAENFNKEISSETKLADFPKLLRKCHIAYNSSVDGIILPSCVRGL
Sbjct: 61  LAGKLVYKLRDEPCSSAENFNKEISSETKLADFPKLLRKCHIAYNSSVDGIILPSCVRGL 120

Query: 121 DAISVTSNYTRSHDGEYINDQNYTGAGVGTIDDAWVVLILSTNTSTGNYDNSGSSSLVVA 180
           DAISVTSNYTRSHDGEYINDQNYTGAGVGTIDDAWVVLILSTNTSTGNYDNSGSSSLVVA
Sbjct: 121 DAISVTSNYTRSHDGEYINDQNYTGAGVGTIDDAWVVLILSTNTSTGNYDNSGSSSLVVA 180

Query: 181 GGGHIGVMVALLGMFVSSLLF 202
           GGGHIGVMVALLGMFVSSLLF
Sbjct: 181 GGGHIGVMVALLGMFVSSLLF 201

[Close]
BLAST of CsaV3_1G038990 vs. NCBI nr
Match: XP_008450653.1 (PREDICTED: uncharacterized GPI-anchored protein At5g19250-like [Cucumis melo])

HSP 1 Score: 363.6 bits (932), Expect = 4.3e-97
Identity = 184/201 (91.54%), Postives = 193/201 (96.02%), Query Frame = 0 

Query: 1   MANSLFRLFTLFFFVLISIFLLHPNVVLCDVKDDNILNAINEYRESKNLSRLSYNRNAAC 60
           MANSLFRLFTLFFFV+ISIFLLHPNVVLCDVKDDNIL+AIN+YR+SKNLS  SYN+NAAC
Sbjct: 1   MANSLFRLFTLFFFVVISIFLLHPNVVLCDVKDDNILSAINKYRQSKNLSEFSYNKNAAC 60

Query: 61  LAGKLVYKLRDEPCSSAENFNKEISSETKLADFPKLLRKCHIAYNSSVDGIILPSCVRGL 120
           LAGKLVYKLRDEPCSSAENFNKEISSETKLADFPKLLRKCHIAYNSS+DGIILPSCV GL
Sbjct: 61  LAGKLVYKLRDEPCSSAENFNKEISSETKLADFPKLLRKCHIAYNSSIDGIILPSCVPGL 120

Query: 121 DAISVTSNYTRSHDGEYINDQNYTGAGVGTIDDAWVVLILSTNTSTGNYDNSGSSSLVVA 180
           D  SVTSNYT SHD EYINDQNYTGAGVGTI+DAWVVLILSTNTSTGNYD+SGSSSLVVA
Sbjct: 121 DPTSVTSNYTHSHDAEYINDQNYTGAGVGTIEDAWVVLILSTNTSTGNYDSSGSSSLVVA 180

Query: 181 GGGHIGVMVALLGMFVSSLLF 202
           GGG +GVMVALLGMFVSSLLF
Sbjct: 181 GGGRVGVMVALLGMFVSSLLF 201

[Close]
BLAST of CsaV3_1G038990 vs. NCBI nr
Match: XP_022961524.1 (uncharacterized GPI-anchored protein At5g19250-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 263.8 bits (673), Expect = 4.6e-67
Identity = 133/190 (70.00%), Postives = 159/190 (83.68%), Query Frame = 0 

Query: 7   RLFTLFFFVLISIFLLHPNVVLCDVKDDNILNAINEYRESKNLSRLSYNRNAACLAGKLV 66
           R+F LFFF +I+ FLL PN VLCDVKD  ILNAIN YR+SK+LS L++N+NAACLA + V
Sbjct: 33  RVFALFFFAVIATFLLLPNAVLCDVKDTEILNAINNYRQSKHLSNLTHNKNAACLASRFV 92

Query: 67  YKLRDEPCSSAENFNKEISSETKLADFPKLLRKCHIAYNSSVDGIILPSCVRGLDAISVT 126
           YKLRDEPCSS ++F+KEI+SE  LADF KLL+KCHIAYNS+VDGI+LP+CV  LD  SV 
Sbjct: 93  YKLRDEPCSSPDDFHKEINSENTLADFLKLLKKCHIAYNSTVDGIMLPACVPHLDPKSVA 152

Query: 127 SNYTRSHDGEYINDQNYTGAGVGTIDDAWVVLILSTNTSTGNYDNSGSSSLVVAGGGHIG 186
            NYT+SHD +YIN +N+TGAGVGT DD W+VL+LSTNTSTGN+ N GSSSLVVA GG IG
Sbjct: 153 DNYTKSHDVDYINSKNFTGAGVGTSDD-WIVLVLSTNTSTGNFANGGSSSLVVARGGCIG 212

Query: 187 VMVALLGMFV 197
           +MV  LG+FV
Sbjct: 213 IMVGFLGLFV 221

[Close]
BLAST of CsaV3_1G038990 vs. NCBI nr
Match: XP_023516540.1 (uncharacterized GPI-anchored protein At5g19250-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 263.1 bits (671), Expect = 7.9e-67
Identity = 133/190 (70.00%), Postives = 161/190 (84.74%), Query Frame = 0 

Query: 7   RLFTLFFFVLISIFLLHPNVVLCDVKDDNILNAINEYRESKNLSRLSYNRNAACLAGKLV 66
           R+F LFFFV+++ FLL PN VLCDVKD  ILNAIN YR+SK+LS L++N+NAACLA + V
Sbjct: 2   RVFALFFFVVVATFLLLPNAVLCDVKDTEILNAINNYRQSKHLSNLTHNKNAACLASRFV 61

Query: 67  YKLRDEPCSSAENFNKEISSETKLADFPKLLRKCHIAYNSSVDGIILPSCVRGLDAISVT 126
           YKLRDEPCSS ++F+KEI+SE  LADF KLL+KCHIAYNS+VDGI+LP+CV  LD  SV+
Sbjct: 62  YKLRDEPCSSPDDFHKEINSENTLADFLKLLKKCHIAYNSTVDGIMLPACVPHLDPKSVS 121

Query: 127 SNYTRSHDGEYINDQNYTGAGVGTIDDAWVVLILSTNTSTGNYDNSGSSSLVVAGGGHIG 186
           SNYT+S D EYI+ +N+TGAGVGT DD W+VL+LSTNTSTGN+ N GSSSLVVA GG IG
Sbjct: 122 SNYTKSRDVEYISSKNFTGAGVGTSDD-WIVLVLSTNTSTGNFANGGSSSLVVARGGCIG 181

Query: 187 VMVALLGMFV 197
           +MV  LG+FV
Sbjct: 182 IMVGFLGLFV 190

[Close]
BLAST of CsaV3_1G038990 vs. NCBI nr
Match: XP_022968795.1 (uncharacterized GPI-anchored protein At3g06035-like [Cucurbita maxima])

HSP 1 Score: 253.4 bits (646), Expect = 6.3e-64
Identity = 131/190 (68.95%), Postives = 156/190 (82.11%), Query Frame = 0 

Query: 7   RLFTLFFFVLISIFLLHPNVVLCDVKDDNILNAINEYRESKNLSRLSYNRNAACLAGKLV 66
           R+F LFF V I+ FLL PN VLCDV+D  ILNAIN YR+ K+LS  +YN+NAACLA + V
Sbjct: 2   RVFALFFAV-IATFLLLPNAVLCDVRDIEILNAINNYRQKKSLSNFTYNKNAACLASRFV 61

Query: 67  YKLRDEPCSSAENFNKEISSETKLADFPKLLRKCHIAYNSSVDGIILPSCVRGLDAISVT 126
           YKLRDEPCSS ++FNKEI+SE  LADF KLL+KCHIAYNS+VDGI+LP+CV  LD  SV+
Sbjct: 62  YKLRDEPCSSPDDFNKEINSENTLADFHKLLKKCHIAYNSTVDGIMLPACVPHLDPESVS 121

Query: 127 SNYTRSHDGEYINDQNYTGAGVGTIDDAWVVLILSTNTSTGNYDNSGSSSLVVAGGGHIG 186
           +NYT+S D +YIN +N+TGAGVGT DD W+VLILSTNTSTGN+ N GSSSLVVA GG IG
Sbjct: 122 NNYTKSRDVDYINSKNFTGAGVGTSDD-WIVLILSTNTSTGNFANGGSSSLVVARGGCIG 181

Query: 187 VMVALLGMFV 197
           +M   LG+FV
Sbjct: 182 IMAGFLGLFV 189

[Close]
BLAST of CsaV3_1G038990 vs. TAIR10
Match: AT3G06035.1 (Glycoprotein membrane precursor GPI-anchored)

HSP 1 Score: 113.6 bits (283), Expect = 1.4e-25
Identity = 58/159 (36.48%), Postives = 99/159 (62.26%), Query Frame = 0 

Query: 15  VLISIFLLHPNVVLCDV-KDDNILNAINEYRESKNLSRLSYNRNAACLAGKLVYKLRDEP 74
           + +SI L     VL D  ++D +L  IN YR ++NL+ LS N NA CLA ++  + +++P
Sbjct: 10  LFLSILLCLNRPVLSDTDEEDILLTGINSYRTTQNLTILSKNENAECLADEIADQFKNKP 69

Query: 75  CSSAENFNKEISSETKLADFPKLLRKCHIAYNSSVDGIILPSCVRGLDAISVTSNYTRSH 134
           C++         +E + A++P++L KCH+  + + DG I+P+CV  L++  V +N+T+S 
Sbjct: 70  CTNDTGSATVPGTEPQFANYPQILAKCHLNVSDTRDGSIMPACVPRLESNLVLTNFTKSQ 129

Query: 135 DGEYINDQNYTGAGVGTIDDAWVVLILSTNTSTGNYDNS 173
               +ND  +TG G+G  DD W+V++L+TNT  G+Y  +
Sbjct: 130 YSMSLNDSKFTGIGIGKEDD-WIVVVLTTNTPEGSYSTA 167

[Close]
BLAST of CsaV3_1G038990 vs. TAIR10
Match: AT5G19250.1 (Glycoprotein membrane precursor GPI-anchored)

HSP 1 Score: 110.5 bits (275), Expect = 1.2e-24
Identity = 70/194 (36.08%), Postives = 107/194 (55.15%), Query Frame = 0 

Query: 11  LFFFVLISIFL-LHPNVVLCDVKD--DNILNAINEYRESKNLSRLSYNRNAACLAGKLVY 70
           L    L+S+FL LHP +VL D  D  D +L  IN YR S NL+ L +N NA CLA ++  
Sbjct: 6   LHLLFLLSVFLSLHP-LVLSDTADEEDVLLTGINSYRASLNLTTLIHNHNAECLADEIAD 65

Query: 71  KLRDEPCSSAENFNKEISSETKLADFPKLLRKCHIAYNSSVDGIILPSCVRGLDAISVTS 130
           + +++PC++         +     + P LL KC +    + DG ILP+CV  LD   V +
Sbjct: 66  QFKNQPCTNTTGSASVPGTTPGFPNLPNLLSKCRLNPTVTRDGAILPACVPNLDPSLVLT 125

Query: 131 NYTRSHDGEYINDQNYTGAGVGTIDDAWVVLILSTNTSTGNYDNSGSSSLVVAGGGHIGV 190
           N+T S   + +ND  +TG G+G+ DD W+V++L+T+T  G+Y  + +S     G      
Sbjct: 126 NFTMSQYSKDLNDSKFTGIGIGS-DDNWIVVVLTTSTPEGSYSPASNSGAFAFG------ 185

Query: 191 MVALLGMFVSSLLF 202
              + G+  SSL+F
Sbjct: 186 ---VNGLVSSSLMF 188

[Close]
BLAST of CsaV3_1G038990 vs. TAIR10
Match: AT5G19240.1 (Glycoprotein membrane precursor GPI-anchored)

HSP 1 Score: 102.8 bits (255), Expect = 2.5e-22
Identity = 61/168 (36.31%), Postives = 96/168 (57.14%), Query Frame = 0 

Query: 16  LISIFLLHPNVVLCDVKDDNIL-NAINEYRESKNLSRLSYNRNAACLAGKLVYKLRDEPC 75
           L+S+FL     VL +   +N+L    N+YRES NL+ L  N+NA CLA ++V +L+++PC
Sbjct: 12  LLSVFLSLHRPVLSNTDGENLLFTVFNQYRESVNLTNLKKNKNAECLADEVVDQLQNQPC 71

Query: 76  SSAENFNKEISSETKLADFPKLLRKCHIAYNSSVDGIILPSCVRGLDAISVTSNYTRSHD 135
           ++         ++  + +FP LL KC +  N + DG+IL  C     +    S++     
Sbjct: 72  TNTTGSASVPGTDPGIPNFPNLLAKCRLNTNVTRDGLILQVCAPKHHSTPDLSSFANVLT 131

Query: 136 GEYINDQNYTGAGVGTIDDA-WVVLILSTNTSTGNYDNSGSSSLVVAG 182
            + +ND  +TGAGVG   D  W+V +L+TNT  G+Y NSG+ +  V G
Sbjct: 132 -KNLNDSKFTGAGVGIDSDGIWLVTVLTTNTPGGSYSNSGAFAFGVNG 178

[Close]
BLAST of CsaV3_1G038990 vs. TAIR10
Match: AT1G54860.1 (Glycoprotein membrane precursor GPI-anchored)

HSP 1 Score: 98.2 bits (243), Expect = 6.1e-21
Identity = 58/191 (30.37%), Postives = 106/191 (55.50%), Query Frame = 0 

Query: 12  FFFVLISIFLLHPNVVLCDVKDDNILNAINEYRESKNLSRLSYNRNAACLAGKLVYKLRD 71
           F+ + + IF L    V+ +  +DN+L  +N YR ++ +   + N  A C+A ++  KL D
Sbjct: 11  FYIIHLLIFSLISTCVVSNQAEDNLLQGLNSYRTAQRVPPFAKNEKADCVADEIADKLED 70

Query: 72  EPCSSAENFNKEI--SSETKLADFPKLLRKCHIAYNSSVDGIILPSCVRGLDAISVTSNY 131
           +PC++    +     S   +L ++  +L +C I  N++ DG+ILP C+         +NY
Sbjct: 71  QPCTNHTTASTVTPGSVPPRLTNYQDILSECKIDPNTTRDGLILPVCIPNRIPTLALTNY 130

Query: 132 TRSHDGEYINDQNYTGAGVGTIDDAWVVLILSTNTSTGNYD-----NSGSSSLVVAGGGH 191
           T++    Y+ND  Y GAGVG+ +  W+V++L+T+T  G++         +S  V+AG G 
Sbjct: 131 TQTGYARYLNDSRYVGAGVGS-EKEWMVVVLTTSTPGGSFTAGVAAGKATSVRVMAGLGL 190

Query: 192 IGVMVALLGMF 196
           +G++ + L +F
Sbjct: 191 MGLLFSCLVLF 200

[Close]
BLAST of CsaV3_1G038990 vs. TAIR10
Match: AT5G19230.1 (Glycoprotein membrane precursor GPI-anchored)

HSP 1 Score: 81.3 bits (199), Expect = 7.7e-16
Identity = 64/180 (35.56%), Postives = 91/180 (50.56%), Query Frame = 0 

Query: 11  LFFFVLISIFLLHPNVVL--CDVKDDNILNAINEYRESKNLSRLSYNRNAACLAGKLVYK 70
           L    L+S+FL    +VL   D +DD +L   N+YR   NL  L+ N NA CLA ++V +
Sbjct: 6   LHLLCLLSVFLSLHRLVLSGTDGEDDLLLTVFNKYRTGLNLKTLTKNENAECLADEVVDQ 65

Query: 71  LRDEPCSSAENFNKEISSETKLADFP--KLLRKCHIAYNSSVDGIILPSCVRGLDAISVT 130
           L+++PC++  N           A  P   LL KC +      DG+I+  C    D     
Sbjct: 66  LKNQPCTNTNN----------SAPVPGNNLLAKCSLNTTVVRDGVIMQVCFPKHDKNPDL 125

Query: 131 SNYTRSHDGEYINDQNYTGAGVGTIDDAWVVLILSTNTSTGNYD-----NSGSSSLVVAG 182
           SN+  S   + +ND   TG G+G+  D WVV+IL+TNT  G Y      NSG+ +  V G
Sbjct: 126 SNF-NSVVLKNLNDSKITGIGIGS-GDIWVVVILTTNTPEGGYSLLTTTNSGAYAFGVNG 173

[Close]
BLAST of CsaV3_1G038990 vs. Swiss-Prot
Match: sp|Q84MC0|UGPI4_ARATH (Uncharacterized GPI-anchored protein At3g06035 OS=Arabidopsis thaliana OX=3702 GN=At3g06035 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.5e-24
Identity = 58/159 (36.48%), Postives = 99/159 (62.26%), Query Frame = 0 

Query: 15  VLISIFLLHPNVVLCDV-KDDNILNAINEYRESKNLSRLSYNRNAACLAGKLVYKLRDEP 74
           + +SI L     VL D  ++D +L  IN YR ++NL+ LS N NA CLA ++  + +++P
Sbjct: 10  LFLSILLCLNRPVLSDTDEEDILLTGINSYRTTQNLTILSKNENAECLADEIADQFKNKP 69

Query: 75  CSSAENFNKEISSETKLADFPKLLRKCHIAYNSSVDGIILPSCVRGLDAISVTSNYTRSH 134
           C++         +E + A++P++L KCH+  + + DG I+P+CV  L++  V +N+T+S 
Sbjct: 70  CTNDTGSATVPGTEPQFANYPQILAKCHLNVSDTRDGSIMPACVPRLESNLVLTNFTKSQ 129

Query: 135 DGEYINDQNYTGAGVGTIDDAWVVLILSTNTSTGNYDNS 173
               +ND  +TG G+G  DD W+V++L+TNT  G+Y  +
Sbjct: 130 YSMSLNDSKFTGIGIGKEDD-WIVVVLTTNTPEGSYSTA 167

[Close]
BLAST of CsaV3_1G038990 vs. Swiss-Prot
Match: sp|P59833|UGPI3_ARATH (Uncharacterized GPI-anchored protein At5g19250 OS=Arabidopsis thaliana OX=3702 GN=At5g19250 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.1e-23
Identity = 70/194 (36.08%), Postives = 107/194 (55.15%), Query Frame = 0 

Query: 11  LFFFVLISIFL-LHPNVVLCDVKD--DNILNAINEYRESKNLSRLSYNRNAACLAGKLVY 70
           L    L+S+FL LHP +VL D  D  D +L  IN YR S NL+ L +N NA CLA ++  
Sbjct: 6   LHLLFLLSVFLSLHP-LVLSDTADEEDVLLTGINSYRASLNLTTLIHNHNAECLADEIAD 65

Query: 71  KLRDEPCSSAENFNKEISSETKLADFPKLLRKCHIAYNSSVDGIILPSCVRGLDAISVTS 130
           + +++PC++         +     + P LL KC +    + DG ILP+CV  LD   V +
Sbjct: 66  QFKNQPCTNTTGSASVPGTTPGFPNLPNLLSKCRLNPTVTRDGAILPACVPNLDPSLVLT 125

Query: 131 NYTRSHDGEYINDQNYTGAGVGTIDDAWVVLILSTNTSTGNYDNSGSSSLVVAGGGHIGV 190
           N+T S   + +ND  +TG G+G+ DD W+V++L+T+T  G+Y  + +S     G      
Sbjct: 126 NFTMSQYSKDLNDSKFTGIGIGS-DDNWIVVVLTTSTPEGSYSPASNSGAFAFG------ 185

Query: 191 MVALLGMFVSSLLF 202
              + G+  SSL+F
Sbjct: 186 ---VNGLVSSSLMF 188

[Close]
BLAST of CsaV3_1G038990 vs. Swiss-Prot
Match: sp|Q84VZ5|UGPI2_ARATH (Uncharacterized GPI-anchored protein At5g19240 OS=Arabidopsis thaliana OX=3702 GN=At5g19240 PE=2 SV=2)

HSP 1 Score: 102.8 bits (255), Expect = 4.5e-21
Identity = 61/168 (36.31%), Postives = 96/168 (57.14%), Query Frame = 0 

Query: 16  LISIFLLHPNVVLCDVKDDNIL-NAINEYRESKNLSRLSYNRNAACLAGKLVYKLRDEPC 75
           L+S+FL     VL +   +N+L    N+YRES NL+ L  N+NA CLA ++V +L+++PC
Sbjct: 12  LLSVFLSLHRPVLSNTDGENLLFTVFNQYRESVNLTNLKKNKNAECLADEVVDQLQNQPC 71

Query: 76  SSAENFNKEISSETKLADFPKLLRKCHIAYNSSVDGIILPSCVRGLDAISVTSNYTRSHD 135
           ++         ++  + +FP LL KC +  N + DG+IL  C     +    S++     
Sbjct: 72  TNTTGSASVPGTDPGIPNFPNLLAKCRLNTNVTRDGLILQVCAPKHHSTPDLSSFANVLT 131

Query: 136 GEYINDQNYTGAGVGTIDDA-WVVLILSTNTSTGNYDNSGSSSLVVAG 182
            + +ND  +TGAGVG   D  W+V +L+TNT  G+Y NSG+ +  V G
Sbjct: 132 -KNLNDSKFTGAGVGIDSDGIWLVTVLTTNTPGGSYSNSGAFAFGVNG 178

[Close]
BLAST of CsaV3_1G038990 vs. Swiss-Prot
Match: sp|Q8GUL8|UGPI1_ARATH (Uncharacterized GPI-anchored protein At5g19230 OS=Arabidopsis thaliana OX=3702 GN=At5g19230 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.4e-14
Identity = 64/180 (35.56%), Postives = 91/180 (50.56%), Query Frame = 0 

Query: 11  LFFFVLISIFLLHPNVVL--CDVKDDNILNAINEYRESKNLSRLSYNRNAACLAGKLVYK 70
           L    L+S+FL    +VL   D +DD +L   N+YR   NL  L+ N NA CLA ++V +
Sbjct: 6   LHLLCLLSVFLSLHRLVLSGTDGEDDLLLTVFNKYRTGLNLKTLTKNENAECLADEVVDQ 65

Query: 71  LRDEPCSSAENFNKEISSETKLADFP--KLLRKCHIAYNSSVDGIILPSCVRGLDAISVT 130
           L+++PC++  N           A  P   LL KC +      DG+I+  C    D     
Sbjct: 66  LKNQPCTNTNN----------SAPVPGNNLLAKCSLNTTVVRDGVIMQVCFPKHDKNPDL 125

Query: 131 SNYTRSHDGEYINDQNYTGAGVGTIDDAWVVLILSTNTSTGNYD-----NSGSSSLVVAG 182
           SN+  S   + +ND   TG G+G+  D WVV+IL+TNT  G Y      NSG+ +  V G
Sbjct: 126 SNF-NSVVLKNLNDSKITGIGIGS-GDIWVVVILTTNTPEGGYSLLTTTNSGAYAFGVNG 173

[Close]
BLAST of CsaV3_1G038990 vs. TrEMBL
Match: tr|A0A1S3BQD0|A0A1S3BQD0_CUCME (uncharacterized GPI-anchored protein At5g19250-like OS=Cucumis melo OX=3656 GN=LOC103492177 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 2.8e-97
Identity = 184/201 (91.54%), Postives = 193/201 (96.02%), Query Frame = 0 

Query: 1   MANSLFRLFTLFFFVLISIFLLHPNVVLCDVKDDNILNAINEYRESKNLSRLSYNRNAAC 60
           MANSLFRLFTLFFFV+ISIFLLHPNVVLCDVKDDNIL+AIN+YR+SKNLS  SYN+NAAC
Sbjct: 1   MANSLFRLFTLFFFVVISIFLLHPNVVLCDVKDDNILSAINKYRQSKNLSEFSYNKNAAC 60

Query: 61  LAGKLVYKLRDEPCSSAENFNKEISSETKLADFPKLLRKCHIAYNSSVDGIILPSCVRGL 120
           LAGKLVYKLRDEPCSSAENFNKEISSETKLADFPKLLRKCHIAYNSS+DGIILPSCV GL
Sbjct: 61  LAGKLVYKLRDEPCSSAENFNKEISSETKLADFPKLLRKCHIAYNSSIDGIILPSCVPGL 120

Query: 121 DAISVTSNYTRSHDGEYINDQNYTGAGVGTIDDAWVVLILSTNTSTGNYDNSGSSSLVVA 180
           D  SVTSNYT SHD EYINDQNYTGAGVGTI+DAWVVLILSTNTSTGNYD+SGSSSLVVA
Sbjct: 121 DPTSVTSNYTHSHDAEYINDQNYTGAGVGTIEDAWVVLILSTNTSTGNYDSSGSSSLVVA 180

Query: 181 GGGHIGVMVALLGMFVSSLLF 202
           GGG +GVMVALLGMFVSSLLF
Sbjct: 181 GGGRVGVMVALLGMFVSSLLF 201

[Close]
BLAST of CsaV3_1G038990 vs. TrEMBL
Match: tr|A0A2I4GCP3|A0A2I4GCP3_9ROSI (uncharacterized GPI-anchored protein At3g06035-like OS=Juglans regia OX=51240 GN=LOC109006764 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.7e-31
Identity = 73/160 (45.62%), Postives = 103/160 (64.38%), Query Frame = 0 

Query: 10  TLFFFVLISIFLLHPNVVLCDVKDDNILNAINEYRESKNLSRLSYNRNAACLAGKLVYKL 69
           +L   VLI   +   + VLCD +DD +   IN YR+S NL   + N NA CLA ++  +L
Sbjct: 9   SLLLLVLIHGVIFLSDPVLCDDEDDTLFQGINSYRQSLNLPEFTENDNAGCLADEIADQL 68

Query: 70  RDEPCSSAENFNKEISSETKLADFPKLLRKCHIAYNSSVDGIILPSCVRGLDAISVTSNY 129
            D PC +A +++    +  K ++F KLL  CHI  N++VDG+++P CV  LD   V SNY
Sbjct: 69  EDLPCDNASDYSFAPGTTPKFSNFNKLLHSCHINVNNTVDGVLMPVCVPKLDPTLVLSNY 128

Query: 130 TRSHDGEYINDQNYTGAGVGTIDDAWVVLILSTNTSTGNY 170
           T S   +Y+ND +YTGAG+ + DD W+V+ILSTNTSTGN+
Sbjct: 129 TNSQYAKYLNDSSYTGAGIASEDD-WIVVILSTNTSTGNF 167

[Close]
BLAST of CsaV3_1G038990 vs. TrEMBL
Match: tr|W9S359|W9S359_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_002452 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.3e-30
Identity = 84/191 (43.98%), Postives = 126/191 (65.97%), Query Frame = 0 

Query: 10  TLFFFVLISIFLLHPNVVLCDVKDDNILNAINEYRESKNLSRLSYNRNAACLAGKLVYKL 69
           +L FFVL+  FLL PN VL +  +DN+L  +N YR+S+ L  L  N  A CLA ++  ++
Sbjct: 7   SLLFFVLLHAFLLLPNSVLSNDDEDNLLQGLNSYRQSQRLPPLVKNGKAECLADEIADEM 66

Query: 70  RDEPCSS-AENFNKEISSETKLADFPKLLRKCHIAYNSSVDGIILPSCVRGLDAISVTSN 129
            D+PC++ A   N   S++T+L ++PKLL+KC I  N++ DG+ILP CV  L    + +N
Sbjct: 67  EDQPCTTFAAGANIAPSTQTQLTNYPKLLKKCKIDANTTSDGVILPVCVSNLVPTLLLTN 126

Query: 130 YTRSHDGEYINDQNYTGAGVGTIDDAWVVLILSTNTSTGNYDNSGSSSLV-VAGGGHIGV 189
           YT +   +Y+N+  YTGAG+G+ DD W+V++LST+T TG++  SGS SLV + G GH  +
Sbjct: 127 YTHTSYAKYLNNTKYTGAGLGSEDD-WMVVVLSTSTPTGSF--SGSLSLVSMMGFGHY-L 186

Query: 190 MVALLGMFVSS 199
           +  L  +FV S
Sbjct: 187 VWGLWSLFVLS 193

[Close]
BLAST of CsaV3_1G038990 vs. TrEMBL
Match: tr|A0A2I4GSI9|A0A2I4GSI9_9ROSI (uncharacterized GPI-anchored protein At5g19250-like OS=Juglans regia OX=51240 GN=LOC109010467 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 6.7e-30
Identity = 79/200 (39.50%), Postives = 129/200 (64.50%), Query Frame = 0 

Query: 1   MANSLFRLFTLFFFVLISIFLLHPNVVLCDVKDDNILNAINEYRESKNLSRLSYNRNAAC 60
           MA+S  RL  LFF +L+S  LL  + V CD +DD +L  IN YR S NL+ L +N NA C
Sbjct: 3   MASSPLRL--LFFPLLLSSILLLNHPVKCDDEDDTLLQGINSYRASLNLTALPHNDNAEC 62

Query: 61  LAGKLVYKLRDEPCSSAENFNKEISSETKLADFPKLLRKCHIAYNSSVDGIILPSCVRGL 120
           LA ++  K +++PC++    N    +E + +D+P LL KCH+ ++++ DG I+P+CV  L
Sbjct: 63  LADEIADKFKNQPCTNTTGSNTIPGTEPQFSDYPNLLAKCHLNFSNTQDGAIMPACVPNL 122

Query: 121 DAISVTSNYTRSHDGEYINDQNYTGAGVGTIDDAWVVLILSTNTSTGNYDNSGSSSLVVA 180
           +   V SN+T+S     +ND  YTGAG+G+ +  W+V++L+TNTSTG++  S +++ +V+
Sbjct: 123 EPNLVLSNFTKSQYSGNLNDTKYTGAGIGS-EKNWIVVVLTTNTSTGSFVPSTNAASLVS 182

Query: 181 GGGHIGVMVALLGMFVSSLL 201
               + ++  LL + + S+L
Sbjct: 183 ---RVDLIHHLLFLLMVSIL 196

[Close]
BLAST of CsaV3_1G038990 vs. TrEMBL
Match: tr|A0A2P5DSY2|A0A2P5DSY2_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_034360 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.1e-29
Identity = 72/163 (44.17%), Postives = 111/163 (68.10%), Query Frame = 0 

Query: 13  FFVLISIFLLHPNVVLCDVKDDNILNAINEYRESKNLSRLSYNRNAACLAGKLVYKLRDE 72
           FFVL+ + LL PN+VL +  +DN+L  IN YR+S  L +L+ N  A CLA ++  ++ D+
Sbjct: 9   FFVLVHVSLLLPNMVLSNDDEDNLLQGINSYRQSLRLPQLAKNGKADCLAAEMADEIEDQ 68

Query: 73  PCSS-AENFNKEISSETKLADFPKLLRKCHIAYNSSVDGIILPSCVRGLDAISVTSNYTR 132
           PC++     N   S++T+L+D+PKLL+KC I  N++ DG+ILP CV  L    V +NYT 
Sbjct: 69  PCTTLTTGPNIVPSTQTQLSDYPKLLKKCGINVNTTTDGVILPVCVPKLVPTLVLTNYTH 128

Query: 133 SHDGEYINDQNYTGAGVGTIDDAWVVLILSTNTSTGNYDNSGS 175
           +   +Y+N+  YTGAGVG+ DD W+V++LST+T+ G++  + S
Sbjct: 129 TSYAKYLNNSKYTGAGVGSEDD-WMVVVLSTSTTAGSFSRAVS 170

The following BLAST results are available for this feature:
BLAST of CsaV3_1G038990 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004135621.11.1e-105100.00PREDICTED: uncharacterized GPI-anchored protein At5g19250-like [Cucumis sativus][more]
XP_008450653.14.3e-9791.54PREDICTED: uncharacterized GPI-anchored protein At5g19250-like [Cucumis melo][more]
XP_022961524.14.6e-6770.00uncharacterized GPI-anchored protein At5g19250-like isoform X1 [Cucurbita moscha... [more]
XP_023516540.17.9e-6770.00uncharacterized GPI-anchored protein At5g19250-like [Cucurbita pepo subsp. pepo][more]
XP_022968795.16.3e-6468.95uncharacterized GPI-anchored protein At3g06035-like [Cucurbita maxima][more]
BLAST of CsaV3_1G038990 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G06035.11.4e-2536.48Glycoprotein membrane precursor GPI-anchored[more]
AT5G19250.11.2e-2436.08Glycoprotein membrane precursor GPI-anchored[more]
AT5G19240.12.5e-2236.31Glycoprotein membrane precursor GPI-anchored[more]
AT1G54860.16.1e-2130.37Glycoprotein membrane precursor GPI-anchored[more]
AT5G19230.17.7e-1635.56Glycoprotein membrane precursor GPI-anchored[more]
BLAST of CsaV3_1G038990 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q84MC0|UGPI4_ARATH2.5e-2436.48Uncharacterized GPI-anchored protein At3g06035 OS=Arabidopsis thaliana OX=3702 G... [more]
sp|P59833|UGPI3_ARATH2.1e-2336.08Uncharacterized GPI-anchored protein At5g19250 OS=Arabidopsis thaliana OX=3702 G... [more]
sp|Q84VZ5|UGPI2_ARATH4.5e-2136.31Uncharacterized GPI-anchored protein At5g19240 OS=Arabidopsis thaliana OX=3702 G... [more]
sp|Q8GUL8|UGPI1_ARATH1.4e-1435.56Uncharacterized GPI-anchored protein At5g19230 OS=Arabidopsis thaliana OX=3702 G... [more]
BLAST of CsaV3_1G038990 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BQD0|A0A1S3BQD0_CUCME2.8e-9791.54uncharacterized GPI-anchored protein At5g19250-like OS=Cucumis melo OX=3656 GN=L... [more]
tr|A0A2I4GCP3|A0A2I4GCP3_9ROSI2.7e-3145.63uncharacterized GPI-anchored protein At3g06035-like OS=Juglans regia OX=51240 GN... [more]
tr|W9S359|W9S359_9ROSA2.3e-3043.98Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_002452 PE=4 SV=1[more]
tr|A0A2I4GSI9|A0A2I4GSI9_9ROSI6.7e-3039.50uncharacterized GPI-anchored protein At5g19250-like OS=Juglans regia OX=51240 GN... [more]
tr|A0A2P5DSY2|A0A2P5DSY2_PARAD1.1e-2944.17Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_034360 PE... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G038990.1CsaV3_1G038990.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33976FAMILY NOT NAMEDcoord: 6..197
NoneNo IPR availablePRODOMPD208950coord: 30..169
e-value: 7.0E-27
score: 298.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_1G038990CSPI01G26650Wild cucumber (PI 183967)cpicucB000
CsaV3_1G038990Cucsa.182110Cucumber (Gy14) v1cgycucB293
CsaV3_1G038990CmaCh05G011460Cucurbita maxima (Rimu)cmacucB0922
CsaV3_1G038990CmaCh10G010780Cucurbita maxima (Rimu)cmacucB0069
CsaV3_1G038990CmaCh12G010780Cucurbita maxima (Rimu)cmacucB0184
CsaV3_1G038990CmoCh10G011610Cucurbita moschata (Rifu)cmocucB0062
CsaV3_1G038990CmoCh12G010940Cucurbita moschata (Rifu)cmocucB0169
CsaV3_1G038990CmoCh05G011570Cucurbita moschata (Rifu)cmocucB0914
CsaV3_1G038990Cp4.1LG07g09190Cucurbita pepo (Zucchini)cpecucB0998
CsaV3_1G038990Cp4.1LG11g09470Cucurbita pepo (Zucchini)cpecucB0100
CsaV3_1G038990Cp4.1LG18g00660Cucurbita pepo (Zucchini)cpecucB0432
CsaV3_1G038990CsGy1G025910Cucumber (Gy14) v2cgybcucB001
CsaV3_1G038990Carg27609Silver-seed gourdcarcucB0837
CsaV3_1G038990Cla005236Watermelon (97103) v1cucwmB025
CsaV3_1G038990ClCG03G016940Watermelon (Charleston Gray)cucwcgB050
CsaV3_1G038990Lsi06G001330Bottle gourd (USVL1VR-Ls)cuclsiB068
CsaV3_1G038990Cla97C03G067310Watermelon (97103) v2cucwmbB041
CsaV3_1G038990Bhi02G001691Wax gourdcucwgoB111
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_1G038990Silver-seed gourdcarcucB0276
CsaV3_1G038990Cucurbita maxima (Rimu)cmacucB0114
CsaV3_1G038990Cucurbita moschata (Rifu)cmocucB0102
CsaV3_1G038990Cucurbita pepo (Zucchini)cpecucB0817
CsaV3_1G038990Melon (DHL92) v3.5.1cucmeB042
CsaV3_1G038990Melon (DHL92) v3.6.1cucmedB039
CsaV3_1G038990Wax gourdcucwgoB090