CsaV3_1G036790 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G036790
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Descriptionproton pump-interactor 2-like isoform X2
Locationchr1 : 22641235 .. 22641656 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATTGAAGTTCCTAATGCAACATGGAAGCAAAAATATAGCCAGTGAGAAGAAGTTATTAAGGGAGATCAGTTCAAGCAGGAAGAAGGAAATTAGATCAACAACAGTTGAAGAACTTGATGTTCCTGTACAGATCATTTAAAATCATCAATGCCTTCAAACATTTTGTCCTAATTTTTCTTTTCAAATGGTTTAATAGTATTAATTATAATTTTCTTGGTACAATCAAAATTACAGATTAAGAAGAAGAATGAGGAAATTGAGAATTCCCATTTGTATTTATACACAACAGATTTTGAAGGGATTAATAAAGAGATGAAAAGGCTTGAAATGGTGAAAGAGAAGGCTGTGGCCAATGCTGCTGTTGGTGGAAAGCTTTGGAGCTCTTTGGGAACCAAAAAGGATATCCAACAGAAAGTTAAT

mRNA sequence

AAATTGAAGTTCCTAATGCAACATGGAAGCAAAAATATAGCCAGTGAGAAGAAGTTATTAAGGGAGATCAGTTCAAGCAGGAAGAAGGAAATTAGATCAACAACAGTTGAAGAACTTGATGTTCCTATTAAGAAGAAGAATGAGGAAATTGAGAATTCCCATTTGTATTTATACACAACAGATTTTGAAGGGATTAATAAAGAGATGAAAAGGCTTGAAATGGTGAAAGAGAAGGCTGTGGCCAATGCTGCTGTTGGTGGAAAGCTTTGGAGCTCTTTGGGAACCAAAAAGGATATCCAACAGAAAGTTAAT

Coding sequence (CDS)

AAATTGAAGTTCCTAATGCAACATGGAAGCAAAAATATAGCCAGTGAGAAGAAGTTATTAAGGGAGATCAGTTCAAGCAGGAAGAAGGAAATTAGATCAACAACAGTTGAAGAACTTGATGTTCCTATTAAGAAGAAGAATGAGGAAATTGAGAATTCCCATTTGTATTTATACACAACAGATTTTGAAGGGATTAATAAAGAGATGAAAAGGCTTGAAATGGTGAAAGAGAAGGCTGTGGCCAATGCTGCTGTTGGTGGAAAGCTTTGGAGCTCTTTGGGAACCAAAAAGGATATCCAACAGAAAGTTAAT

Protein sequence

KLKFLMQHGSKNIASEKKLLREISSSRKKEIRSTTVEELDVPIKKKNEEIENSHLYLYTTDFEGINKEMKRLEMVKEKAVANAAVGGKLWSSLGTKKDIQQKVN
Homology
[Close]
BLAST of CsaV3_1G036790 vs. NCBI nr
Match: KGN65870.1 (hypothetical protein Csa_1G534760 [Cucumis sativus])

HSP 1 Score: 188.7 bits (478), Expect = 9.8e-45
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0 

Query: 6   MQHGSKNIASEKKLLREISSSRKKEIRSTTVEELDVPIKKKNEEIENSHLYLYTTDFEGI 65
           MQHGSKNIASEKKLLREISSSRKKEIRSTTVEELDVPIKKKNEEIENSHLYLYTTDFEGI
Sbjct: 1   MQHGSKNIASEKKLLREISSSRKKEIRSTTVEELDVPIKKKNEEIENSHLYLYTTDFEGI 60

Query: 66  NKEMKRLEMVKEKAVANAAVGGKLWSSLGTKKDIQQKVN 105
           NKEMKRLEMVKEKAVANAAVGGKLWSSLGTKKDIQQKVN
Sbjct: 61  NKEMKRLEMVKEKAVANAAVGGKLWSSLGTKKDIQQKVN 99

[Close]
BLAST of CsaV3_1G036790 vs. NCBI nr
Match: XP_016899262.1 (PREDICTED: uncharacterized protein LOC103489454 [Cucumis melo])

HSP 1 Score: 185.3 bits (469), Expect = 1.1e-43
Identity = 94/104 (90.38%), Postives = 104/104 (100.00%), Query Frame = 0 

Query: 1   KLKFLMQHGSKNIASEKKLLREISSSRKKEIRSTTVEELDVPIKKKNEEIENSHLYLYTT 60
           KLKFLMQHGSKNIA+EKKLLREI+SS+KK+IR+TT+EELDVPIKKKN+EIENSHLYLYTT
Sbjct: 88  KLKFLMQHGSKNIANEKKLLREINSSKKKKIRTTTIEELDVPIKKKNDEIENSHLYLYTT 147

Query: 61  DFEGINKEMKRLEMVKEKAVANAAVGGKLWSSLGTKKDIQQKVN 105
           DFEGIN+EMKRLEMVK+KAVANAAVGGKLWSSLGTKKDIQQ+VN
Sbjct: 148 DFEGINEEMKRLEMVKQKAVANAAVGGKLWSSLGTKKDIQQQVN 191

[Close]
BLAST of CsaV3_1G036790 vs. NCBI nr
Match: XP_022955118.1 (uncharacterized protein LOC111457179 isoform X2 [Cucurbita moschata])

HSP 1 Score: 119.8 bits (299), Expect = 5.6e-24
Identity = 61/103 (59.22%), Postives = 84/103 (81.55%), Query Frame = 0 

Query: 1   KLKFLMQHGSKNIASEKKLLREISSSRKKEIRSTTVEELDVPIKKKNEEIENSHLYLYTT 60
           KL+FL++HGSKN+A EKKLLR+I++S+K +   TT++EL+ PIK  +E+I+NS ++LY T
Sbjct: 82  KLQFLLRHGSKNMAKEKKLLRDINTSQKSKQAGTTLDELEAPIKNLDEQIKNSRMHLYRT 141

Query: 61  DFEGINKEMKRLEMVKEKAVANAAVGGKLWSSLGTKKDIQQKV 104
           DFE I +E K  EM KE AVANA VGG+LWSSLG+KK +Q++V
Sbjct: 142 DFEEIYREKKVHEMEKETAVANAGVGGRLWSSLGSKKHVQRQV 184

[Close]
BLAST of CsaV3_1G036790 vs. NCBI nr
Match: XP_022955117.1 (uncharacterized protein LOC111457179 isoform X1 [Cucurbita moschata])

HSP 1 Score: 104.0 bits (258), Expect = 3.2e-19
Identity = 61/133 (45.86%), Postives = 84/133 (63.16%), Query Frame = 0 

Query: 1   KLKFLMQHGSKNIASEKKLLREISSSRKKEIRSTTVEELDVP------------------ 60
           KL+FL++HGSKN+A EKKLLR+I++S+K +   TT++EL+ P                  
Sbjct: 82  KLQFLLRHGSKNMAKEKKLLRDINTSQKSKQAGTTLDELEAPVHKLKLLPFKFLCWIISI 141

Query: 61  ------------IKKKNEEIENSHLYLYTTDFEGINKEMKRLEMVKEKAVANAAVGGKLW 104
                       IK  +E+I+NS ++LY TDFE I +E K  EM KE AVANA VGG+LW
Sbjct: 142 NIFLLIFSESKQIKNLDEQIKNSRMHLYRTDFEEIYREKKVHEMEKETAVANAGVGGRLW 201

[Close]
BLAST of CsaV3_1G036790 vs. NCBI nr
Match: XP_011037343.1 (PREDICTED: uncharacterized protein LOC105134583 [Populus euphratica] >XP_011037344.1 PREDICTED: uncharacterized protein LOC105134583 [Populus euphratica])

HSP 1 Score: 82.8 bits (203), Expect = 7.5e-13
Identity = 49/104 (47.12%), Postives = 70/104 (67.31%), Query Frame = 0 

Query: 2   LKFLMQHGSKNIASEKKLLREISSSRKKEIRS--TTVEELDVPIKKKNEEIENSHLYLYT 61
           L F + HGSKN+A+EKKLLREI +S K +I S  ++++E+D  I   N  +        T
Sbjct: 138 LNFKLLHGSKNLAAEKKLLREIKASEKGKIVSLWSSLKEIDSSIYPLNYRLLYGCYNAST 197

Query: 62  TDFEGINKEMKRLEMVKEKAVANAAVGGKLWSSLGTKKDIQQKV 104
              E I KE++ LE+ KEKA+ANA V GK+W+SLGTKK +Q+++
Sbjct: 198 VGDESILKEIQHLEITKEKAIANATVKGKIWNSLGTKKALQEEI 241

[Close]
BLAST of CsaV3_1G036790 vs. TrEMBL
Match: tr|A0A0A0LVC7|A0A0A0LVC7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534760 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 6.5e-45
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0 

Query: 6   MQHGSKNIASEKKLLREISSSRKKEIRSTTVEELDVPIKKKNEEIENSHLYLYTTDFEGI 65
           MQHGSKNIASEKKLLREISSSRKKEIRSTTVEELDVPIKKKNEEIENSHLYLYTTDFEGI
Sbjct: 1   MQHGSKNIASEKKLLREISSSRKKEIRSTTVEELDVPIKKKNEEIENSHLYLYTTDFEGI 60

Query: 66  NKEMKRLEMVKEKAVANAAVGGKLWSSLGTKKDIQQKVN 105
           NKEMKRLEMVKEKAVANAAVGGKLWSSLGTKKDIQQKVN
Sbjct: 61  NKEMKRLEMVKEKAVANAAVGGKLWSSLGTKKDIQQKVN 99

[Close]
BLAST of CsaV3_1G036790 vs. TrEMBL
Match: tr|A0A1S4DTD6|A0A1S4DTD6_CUCME (uncharacterized protein LOC103489454 OS=Cucumis melo OX=3656 GN=LOC103489454 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 7.1e-44
Identity = 94/104 (90.38%), Postives = 104/104 (100.00%), Query Frame = 0 

Query: 1   KLKFLMQHGSKNIASEKKLLREISSSRKKEIRSTTVEELDVPIKKKNEEIENSHLYLYTT 60
           KLKFLMQHGSKNIA+EKKLLREI+SS+KK+IR+TT+EELDVPIKKKN+EIENSHLYLYTT
Sbjct: 88  KLKFLMQHGSKNIANEKKLLREINSSKKKKIRTTTIEELDVPIKKKNDEIENSHLYLYTT 147

Query: 61  DFEGINKEMKRLEMVKEKAVANAAVGGKLWSSLGTKKDIQQKVN 105
           DFEGIN+EMKRLEMVK+KAVANAAVGGKLWSSLGTKKDIQQ+VN
Sbjct: 148 DFEGINEEMKRLEMVKQKAVANAAVGGKLWSSLGTKKDIQQQVN 191

[Close]
BLAST of CsaV3_1G036790 vs. TrEMBL
Match: tr|B9N5V7|B9N5V7_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_013G130500v3 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.5e-12
Identity = 47/104 (45.19%), Postives = 70/104 (67.31%), Query Frame = 0 

Query: 2   LKFLMQHGSKNIASEKKLLREISSSRKKEIRS--TTVEELDVPIKKKNEEIENSHLYLYT 61
           L F + HGSKN+A+EKKLLREI +S K +  S  ++++E+D  I   N ++        T
Sbjct: 139 LNFKLLHGSKNLAAEKKLLREIKASEKGKTVSLWSSLKEIDSSICPLNYQLLRGCYNAST 198

Query: 62  TDFEGINKEMKRLEMVKEKAVANAAVGGKLWSSLGTKKDIQQKV 104
              + I KE++ LE+ KEKA+ANA V GK+W+SLGTKK +Q+++
Sbjct: 199 VGDKSILKEIQHLEIAKEKAIANATVKGKIWNSLGTKKALQEEI 242

[Close]
BLAST of CsaV3_1G036790 vs. TrEMBL
Match: tr|A0A0A0K9L8|A0A0A0K9L8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G094680 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.1e-11
Identity = 45/107 (42.06%), Postives = 71/107 (66.36%), Query Frame = 0 

Query: 1   KLKFLMQHGSKNIASEKKLLREISSSRKKEIRSTTVEELDVPIKKKNEEIENSHLYLYTT 60
           KL FLM HG KN+A E+KLLRE+++S+ K+    T++EL  PI++   +   +++    +
Sbjct: 182 KLHFLMLHGCKNMADERKLLREVNASQGKD-GGITLDELHAPIQRLRGQFPTNYMGRTES 241

Query: 61  D----FEGINKEMKRLEMVKEKAVANAAVGGKLWSSLGTKKDIQQKV 104
           D     + I K +K  E++ EKA+ANA V GKLW+SL +KK IQ+++
Sbjct: 242 DENARKQAILKGIKHHEVIMEKAIANAVVNGKLWNSLSSKKSIQEEI 287

[Close]
BLAST of CsaV3_1G036790 vs. TrEMBL
Match: tr|A0A1S3CCE0|A0A1S3CCE0_CUCME (proton pump-interactor 2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498860 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.0e-10
Identity = 45/105 (42.86%), Postives = 68/105 (64.76%), Query Frame = 0 

Query: 1   KLKFLMQHGSKNIASEKKLLREISSSRKKEIRSTTVEELDVPIKKKNEEIENSHLYLYTT 60
           KL FLM HG KN+A E+KLLRE++ S+ K+    T++EL  PI++  ++        +  
Sbjct: 179 KLHFLMLHGCKNMADERKLLREVNESQGKD-GGITLDELHAPIRRLRQQ--------FPM 238

Query: 61  DFEGINKE--MKRLEMVKEKAVANAAVGGKLWSSLGTKKDIQQKV 104
            F G + E   K+ E++ EKA+ANA V GKLW+SL +KK IQ+++
Sbjct: 239 YFRGESDEDPRKQHEVIIEKAIANAVVNGKLWNSLSSKKSIQEEI 274

The following BLAST results are available for this feature:
BLAST of CsaV3_1G036790 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN65870.19.8e-45100.00hypothetical protein Csa_1G534760 [Cucumis sativus][more]
XP_016899262.11.1e-4390.38PREDICTED: uncharacterized protein LOC103489454 [Cucumis melo][more]
XP_022955118.15.6e-2459.22uncharacterized protein LOC111457179 isoform X2 [Cucurbita moschata][more]
XP_022955117.13.2e-1945.86uncharacterized protein LOC111457179 isoform X1 [Cucurbita moschata][more]
XP_011037343.17.5e-1347.12PREDICTED: uncharacterized protein LOC105134583 [Populus euphratica] >XP_0110373... [more]
BLAST of CsaV3_1G036790 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G036790 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G036790 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LVC7|A0A0A0LVC7_CUCSA6.5e-45100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534760 PE=4 SV=1[more]
tr|A0A1S4DTD6|A0A1S4DTD6_CUCME7.1e-4490.38uncharacterized protein LOC103489454 OS=Cucumis melo OX=3656 GN=LOC103489454 PE=... [more]
tr|B9N5V7|B9N5V7_POPTR2.5e-1245.19Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_013G130500v3 PE=... [more]
tr|A0A0A0K9L8|A0A0A0K9L8_CUCSA2.1e-1142.06Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G094680 PE=4 SV=1[more]
tr|A0A1S3CCE0|A0A1S3CCE0_CUCME3.0e-1042.86proton pump-interactor 2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498860... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0010155 regulation of proton transport
cellular_component GO:0005575 cellular_component
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005886 plasma membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G036790.1CsaV3_1G036790.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_1G036790CSPI01G24510Wild cucumber (PI 183967)cpicucB000
CsaV3_1G036790CsGy1G023970Cucumber (Gy14) v2cgybcucB001
CsaV3_1G036790Carg22555Silver-seed gourdcarcucB0454
CsaV3_1G036790Cla019558Watermelon (97103) v1cucwmB030
CsaV3_1G036790ClCG03G006560Watermelon (Charleston Gray)cucwcgB054
CsaV3_1G036790Lsi02G009140Bottle gourd (USVL1VR-Ls)cuclsiB023
CsaV3_1G036790MELO3C035705.2Melon (DHL92) v3.6.1cucmedB026
CsaV3_1G036790Cla97C03G057850Watermelon (97103) v2cucwmbB045
CsaV3_1G036790Bhi08G001661Wax gourdcucwgoB057
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_1G036790Silver-seed gourdcarcucB0235
CsaV3_1G036790Cucumber (Gy14) v1cgycucB230
CsaV3_1G036790Cucurbita maxima (Rimu)cmacucB0251
CsaV3_1G036790Cucurbita maxima (Rimu)cmacucB0467
CsaV3_1G036790Cucurbita moschata (Rifu)cmocucB0237
CsaV3_1G036790Cucurbita moschata (Rifu)cmocucB0458
CsaV3_1G036790Cucurbita pepo (Zucchini)cpecucB0032
CsaV3_1G036790Cucurbita pepo (Zucchini)cpecucB0626
CsaV3_1G036790Melon (DHL92) v3.5.1cucmeB027