CSPI01G24510 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAATGGAGCGTAAGCAATTTAAAATTCCAAGAAGAAACAATCAAAAGGGAAGTGAAATTGAAGGTGGAAGAATTAAATAAGCTTCATCCATCTCTAGACAAACTCTCTTTTGCAAATAATGCCTATAGGGTCATCAAACCCAAATCAACTTCATGCTTATCAGTTGGAGAATTTGATAACAAGGTAACTTAATTGAATTAATTTCTCTAATATATTTATTTTGTAACACAATTTTCAGATTTAATAATACATAAAAAAACATATTTTAATGTTAACAAAAAACAAACCGAAAAAAAAAATCTACAACATCAACTAGTAGTAAGAACTAGATTTAAAATTTAGAGACTTAGACATTCGGAAGTATTCCGACTAAAATTGAACAAACTCTATAAAGTTTAAGAATTCAAATGATATTTTAACCTAATCTAAAACTACTAACATGGTTTCACTAGTCCTCCATCTCACTTCCGCCATGCTTGGAACTAGGCTACGACTACGTTTCGTTGACCGCCTTGGCAATCTGCTGGCGAGGCACCCTACTTCAGCAAAACTTTCAGAGCTCTACCAGGGTTTAGGGTTTAGAACTAATATACTAATATATTGTGAACTAGAATTAATACTAACTTATACTAACGTTATAAACAGAAATTGAAGTTCCTAATGCAACATGGAAGCAAAAATATAGCCAGTGAGAAGAAGTTATTAAGGGAGATCAGTTCAAGCAGGAAGAAGGAAATTAGATCAACAACAGTTGAAGAACTTGATGTTCCTGTACAGATCGTTAAAAATCATCAATGCCTTCAAACATTTTGTCCTAATTTTTCTTTTCAAATGGGTTAATAGTATTAATTATAATTTTCTTGGTACAATCAAAATTACAGATTAAGAAGAAGAATGATGAAATTGAGAATTCCCATTTGTATTTATACACAACAGATTTTGAAGGGATTAATAAAGAGATGAAAAGGCTTGAAATGGTGAAAGAGAAGGCTGTGGCCAATGCTGCTGTTGGTGGAAAGCTTTGGAGCTCTTTGGGAACCAAAAAGGATATCCAACAGAAAGTTAATGTAAAAAAAAAAAAAAAAAAGATTGGATTTGAATTCTGTGAAAAGGAAAATTTATTATTATTGTTGAGTTTAATTATGGTTTTTAATTGCAGGTCATGTATGAGGAATTAGATGAGCTGAGGTTAAAGCAAATTGAAACTCGAAATGAAACCAAGTATGGGGAGAAAAAGTTGAGGATTATACAAAAACAAATCTTGTATTTACACAAACAATTGGAAATAATATATCCA ATGAAATGGAGCGTAAGCAATTTAAAATTCCAAGAAGAAACAATCAAAAGGGAAGTGAAATTGAAGGTGGAAGAATTAAATAAGCTTCATCCATCTCTAGACAAACTCTCTTTTGCAAATAATGCCTATAGGGTCATCAAACCCAAATCAACTTCATGCTTATCAGTTGGAGAATTTGATAACAAGTCCTCCATCTCACTTCCGCCATGCTTGGAACTAGGCTACGACTACGTTTCGTTGACCGCCTTGGCAATCTGCTGGCGAGGCACCCTACTTCAGCAAAACTTTCAGAGCTCTACCAGGAAATTGAAGTTCCTAATGCAACATGGAAGCAAAAATATAGCCAGTGAGAAGAAGTTATTAAGGGAGATCAGTTCAAGCAGGAAGAAGGAAATTAGATCAACAACAGTTGAAGAACTTGATGTTCCTATTAAGAAGAAGAATGATGAAATTGAGAATTCCCATTTGTATTTATACACAACAGATTTTGAAGGGATTAATAAAGAGATGAAAAGGCTTGAAATGGTGAAAGAGAAGGCTGTGGCCAATGCTGCTGTTGGTGGAAAGCTTTGGAGCTCTTTGGGAACCAAAAAGGATATCCAACAGAAAGTTAATGTCATGTATGAGGAATTAGATGAGCTGAGGTTAAAGCAAATTGAAACTCGAAATGAAACCAAGTATGGGGAGAAAAAGTTGAGGATTATACAAAAACAAATCTTGTATTTACACAAACAATTGGAAATAATATATCCA ATGAAATGGAGCGTAAGCAATTTAAAATTCCAAGAAGAAACAATCAAAAGGGAAGTGAAATTGAAGGTGGAAGAATTAAATAAGCTTCATCCATCTCTAGACAAACTCTCTTTTGCAAATAATGCCTATAGGGTCATCAAACCCAAATCAACTTCATGCTTATCAGTTGGAGAATTTGATAACAAGTCCTCCATCTCACTTCCGCCATGCTTGGAACTAGGCTACGACTACGTTTCGTTGACCGCCTTGGCAATCTGCTGGCGAGGCACCCTACTTCAGCAAAACTTTCAGAGCTCTACCAGGAAATTGAAGTTCCTAATGCAACATGGAAGCAAAAATATAGCCAGTGAGAAGAAGTTATTAAGGGAGATCAGTTCAAGCAGGAAGAAGGAAATTAGATCAACAACAGTTGAAGAACTTGATGTTCCTATTAAGAAGAAGAATGATGAAATTGAGAATTCCCATTTGTATTTATACACAACAGATTTTGAAGGGATTAATAAAGAGATGAAAAGGCTTGAAATGGTGAAAGAGAAGGCTGTGGCCAATGCTGCTGTTGGTGGAAAGCTTTGGAGCTCTTTGGGAACCAAAAAGGATATCCAACAGAAAGTTAATGTCATGTATGAGGAATTAGATGAGCTGAGGTTAAAGCAAATTGAAACTCGAAATGAAACCAAGTATGGGGAGAAAAAGTTGAGGATTATACAAAAACAAATCTTGTATTTACACAAACAATTGGAAATAATATATCCA
BLAST of CSPI01G24510 vs. TrEMBL
Match: A0A0A0LVC7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G534760 PE=4 SV=1) HSP 1 Score: 272.3 bits (695), Expect = 5.8e-70 Identity = 144/145 (99.31%), Postives = 145/145 (100.00%), Query Frame = 1
BLAST of CSPI01G24510 vs. TrEMBL
Match: B9N5V7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s13410g PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 3.3e-17 Identity = 61/148 (41.22%), Postives = 95/148 (64.19%), Query Frame = 1
BLAST of CSPI01G24510 vs. TrEMBL
Match: A0A0A0K9L8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G094680 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 5.0e-13 Identity = 54/148 (36.49%), Postives = 90/148 (60.81%), Query Frame = 1
BLAST of CSPI01G24510 vs. TrEMBL
Match: B9RVY2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1174060 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 5.2e-10 Identity = 54/150 (36.00%), Postives = 86/150 (57.33%), Query Frame = 1
BLAST of CSPI01G24510 vs. TrEMBL
Match: A0A0A0KFC5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G094690 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 3.7e-08 Identity = 58/158 (36.71%), Postives = 88/158 (55.70%), Query Frame = 1
BLAST of CSPI01G24510 vs. NCBI nr
Match: gi|659068881|ref|XP_008446869.1| (PREDICTED: proton pump-interactor 1-like [Cucumis melo]) HSP 1 Score: 284.6 bits (727), Expect = 1.6e-73 Identity = 161/237 (67.93%), Postives = 181/237 (76.37%), Query Frame = 1
BLAST of CSPI01G24510 vs. NCBI nr
Match: gi|700210774|gb|KGN65870.1| (hypothetical protein Csa_1G534760 [Cucumis sativus]) HSP 1 Score: 272.3 bits (695), Expect = 8.3e-70 Identity = 144/145 (99.31%), Postives = 145/145 (100.00%), Query Frame = 1
BLAST of CSPI01G24510 vs. NCBI nr
Match: gi|659119830|ref|XP_008459865.1| (PREDICTED: proton pump-interactor 2-like isoform X1 [Cucumis melo]) HSP 1 Score: 105.5 bits (262), Expect = 1.3e-19 Identity = 91/246 (36.99%), Postives = 135/246 (54.88%), Query Frame = 1
BLAST of CSPI01G24510 vs. NCBI nr
Match: gi|743884696|ref|XP_011037343.1| (PREDICTED: uncharacterized protein LOC105134583 [Populus euphratica]) HSP 1 Score: 100.1 bits (248), Expect = 5.7e-18 Identity = 63/148 (42.57%), Postives = 95/148 (64.19%), Query Frame = 1
BLAST of CSPI01G24510 vs. NCBI nr
Match: gi|566201135|ref|XP_006376483.1| (hypothetical protein POPTR_0013s13410g [Populus trichocarpa]) HSP 1 Score: 97.1 bits (240), Expect = 4.8e-17 Identity = 61/148 (41.22%), Postives = 95/148 (64.19%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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