CSPI01G24510 (gene) Wild cucumber (PI 183967)

NameCSPI01G24510
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr1 : 19819908 .. 19821207 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAATGGAGCGTAAGCAATTTAAAATTCCAAGAAGAAACAATCAAAAGGGAAGTGAAATTGAAGGTGGAAGAATTAAATAAGCTTCATCCATCTCTAGACAAACTCTCTTTTGCAAATAATGCCTATAGGGTCATCAAACCCAAATCAACTTCATGCTTATCAGTTGGAGAATTTGATAACAAGGTAACTTAATTGAATTAATTTCTCTAATATATTTATTTTGTAACACAATTTTCAGATTTAATAATACATAAAAAAACATATTTTAATGTTAACAAAAAACAAACCGAAAAAAAAAATCTACAACATCAACTAGTAGTAAGAACTAGATTTAAAATTTAGAGACTTAGACATTCGGAAGTATTCCGACTAAAATTGAACAAACTCTATAAAGTTTAAGAATTCAAATGATATTTTAACCTAATCTAAAACTACTAACATGGTTTCACTAGTCCTCCATCTCACTTCCGCCATGCTTGGAACTAGGCTACGACTACGTTTCGTTGACCGCCTTGGCAATCTGCTGGCGAGGCACCCTACTTCAGCAAAACTTTCAGAGCTCTACCAGGGTTTAGGGTTTAGAACTAATATACTAATATATTGTGAACTAGAATTAATACTAACTTATACTAACGTTATAAACAGAAATTGAAGTTCCTAATGCAACATGGAAGCAAAAATATAGCCAGTGAGAAGAAGTTATTAAGGGAGATCAGTTCAAGCAGGAAGAAGGAAATTAGATCAACAACAGTTGAAGAACTTGATGTTCCTGTACAGATCGTTAAAAATCATCAATGCCTTCAAACATTTTGTCCTAATTTTTCTTTTCAAATGGGTTAATAGTATTAATTATAATTTTCTTGGTACAATCAAAATTACAGATTAAGAAGAAGAATGATGAAATTGAGAATTCCCATTTGTATTTATACACAACAGATTTTGAAGGGATTAATAAAGAGATGAAAAGGCTTGAAATGGTGAAAGAGAAGGCTGTGGCCAATGCTGCTGTTGGTGGAAAGCTTTGGAGCTCTTTGGGAACCAAAAAGGATATCCAACAGAAAGTTAATGTAAAAAAAAAAAAAAAAAAGATTGGATTTGAATTCTGTGAAAAGGAAAATTTATTATTATTGTTGAGTTTAATTATGGTTTTTAATTGCAGGTCATGTATGAGGAATTAGATGAGCTGAGGTTAAAGCAAATTGAAACTCGAAATGAAACCAAGTATGGGGAGAAAAAGTTGAGGATTATACAAAAACAAATCTTGTATTTACACAAACAATTGGAAATAATATATCCA

mRNA sequence

ATGAAATGGAGCGTAAGCAATTTAAAATTCCAAGAAGAAACAATCAAAAGGGAAGTGAAATTGAAGGTGGAAGAATTAAATAAGCTTCATCCATCTCTAGACAAACTCTCTTTTGCAAATAATGCCTATAGGGTCATCAAACCCAAATCAACTTCATGCTTATCAGTTGGAGAATTTGATAACAAGTCCTCCATCTCACTTCCGCCATGCTTGGAACTAGGCTACGACTACGTTTCGTTGACCGCCTTGGCAATCTGCTGGCGAGGCACCCTACTTCAGCAAAACTTTCAGAGCTCTACCAGGAAATTGAAGTTCCTAATGCAACATGGAAGCAAAAATATAGCCAGTGAGAAGAAGTTATTAAGGGAGATCAGTTCAAGCAGGAAGAAGGAAATTAGATCAACAACAGTTGAAGAACTTGATGTTCCTATTAAGAAGAAGAATGATGAAATTGAGAATTCCCATTTGTATTTATACACAACAGATTTTGAAGGGATTAATAAAGAGATGAAAAGGCTTGAAATGGTGAAAGAGAAGGCTGTGGCCAATGCTGCTGTTGGTGGAAAGCTTTGGAGCTCTTTGGGAACCAAAAAGGATATCCAACAGAAAGTTAATGTCATGTATGAGGAATTAGATGAGCTGAGGTTAAAGCAAATTGAAACTCGAAATGAAACCAAGTATGGGGAGAAAAAGTTGAGGATTATACAAAAACAAATCTTGTATTTACACAAACAATTGGAAATAATATATCCA

Coding sequence (CDS)

ATGAAATGGAGCGTAAGCAATTTAAAATTCCAAGAAGAAACAATCAAAAGGGAAGTGAAATTGAAGGTGGAAGAATTAAATAAGCTTCATCCATCTCTAGACAAACTCTCTTTTGCAAATAATGCCTATAGGGTCATCAAACCCAAATCAACTTCATGCTTATCAGTTGGAGAATTTGATAACAAGTCCTCCATCTCACTTCCGCCATGCTTGGAACTAGGCTACGACTACGTTTCGTTGACCGCCTTGGCAATCTGCTGGCGAGGCACCCTACTTCAGCAAAACTTTCAGAGCTCTACCAGGAAATTGAAGTTCCTAATGCAACATGGAAGCAAAAATATAGCCAGTGAGAAGAAGTTATTAAGGGAGATCAGTTCAAGCAGGAAGAAGGAAATTAGATCAACAACAGTTGAAGAACTTGATGTTCCTATTAAGAAGAAGAATGATGAAATTGAGAATTCCCATTTGTATTTATACACAACAGATTTTGAAGGGATTAATAAAGAGATGAAAAGGCTTGAAATGGTGAAAGAGAAGGCTGTGGCCAATGCTGCTGTTGGTGGAAAGCTTTGGAGCTCTTTGGGAACCAAAAAGGATATCCAACAGAAAGTTAATGTCATGTATGAGGAATTAGATGAGCTGAGGTTAAAGCAAATTGAAACTCGAAATGAAACCAAGTATGGGGAGAAAAAGTTGAGGATTATACAAAAACAAATCTTGTATTTACACAAACAATTGGAAATAATATATCCA
BLAST of CSPI01G24510 vs. TrEMBL
Match: A0A0A0LVC7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G534760 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 5.8e-70
Identity = 144/145 (99.31%), Postives = 145/145 (100.00%), Query Frame = 1

Query: 107 MQHGSKNIASEKKLLREISSSRKKEIRSTTVEELDVPIKKKNDEIENSHLYLYTTDFEGI 166
           MQHGSKNIASEKKLLREISSSRKKEIRSTTVEELDVPIKKKN+EIENSHLYLYTTDFEGI
Sbjct: 1   MQHGSKNIASEKKLLREISSSRKKEIRSTTVEELDVPIKKKNEEIENSHLYLYTTDFEGI 60

Query: 167 NKEMKRLEMVKEKAVANAAVGGKLWSSLGTKKDIQQKVNVMYEELDELRLKQIETRNETK 226
           NKEMKRLEMVKEKAVANAAVGGKLWSSLGTKKDIQQKVNVMYEELDELRLKQIETRNETK
Sbjct: 61  NKEMKRLEMVKEKAVANAAVGGKLWSSLGTKKDIQQKVNVMYEELDELRLKQIETRNETK 120

Query: 227 YGEKKLRIIQKQILYLHKQLEIIYP 252
           YGEKKLRIIQKQILYLHKQLEIIYP
Sbjct: 121 YGEKKLRIIQKQILYLHKQLEIIYP 145

BLAST of CSPI01G24510 vs. TrEMBL
Match: B9N5V7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s13410g PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.3e-17
Identity = 61/148 (41.22%), Postives = 95/148 (64.19%), Query Frame = 1

Query: 101 RKLKFLMQHGSKNIASEKKLLREISSSRKKEIRS--TTVEELDVPIKKKNDEIENSHLYL 160
           R L F + HGSKN+A+EKKLLREI +S K +  S  ++++E+D  I   N ++       
Sbjct: 137 RNLNFKLLHGSKNLAAEKKLLREIKASEKGKTVSLWSSLKEIDSSICPLNYQLLRGCYNA 196

Query: 161 YTTDFEGINKEMKRLEMVKEKAVANAAVGGKLWSSLGTKKDIQQKVNVMYEELDELRLKQ 220
            T   + I KE++ LE+ KEKA+ANA V GK+W+SLGTKK +Q+++    +EL +LR + 
Sbjct: 197 STVGDKSILKEIQHLEIAKEKAIANATVKGKIWNSLGTKKALQEEIKFHAKELVDLRKQH 256

Query: 221 IETRNETKYGEKKLRIIQKQILYLHKQL 247
           +  +   K  E+KL  ++K+I+ L +QL
Sbjct: 257 LFLKASIKEVEEKLPAVEKRIISLERQL 284

BLAST of CSPI01G24510 vs. TrEMBL
Match: A0A0A0K9L8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G094680 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 5.0e-13
Identity = 54/148 (36.49%), Postives = 90/148 (60.81%), Query Frame = 1

Query: 101 RKLKFLMQHGSKNIASEKKLLREISSSRKKEIRSTTVEELDVPIKKKNDEIENSHLYLYT 160
           +KL FLM HG KN+A E+KLLRE+++S+ K+    T++EL  PI++   +   +++    
Sbjct: 181 QKLHFLMLHGCKNMADERKLLREVNASQGKD-GGITLDELHAPIQRLRGQFPTNYMGRTE 240

Query: 161 TDF----EGINKEMKRLEMVKEKAVANAAVGGKLWSSLGTKKDIQQKVNVMYEELDELRL 220
           +D     + I K +K  E++ EKA+ANA V GKLW+SL +KK IQ+++ ++     + R 
Sbjct: 241 SDENARKQAILKGIKHHEVIMEKAIANAVVNGKLWNSLSSKKSIQEEIEMLNNSSIQPRE 300

Query: 221 KQIETRNETKYGEKKLRIIQKQILYLHK 245
           +Q +T  E +    +L  ++K I  L K
Sbjct: 301 RQRKTITEIRKVNLELEKVEKDIRSLQK 327

BLAST of CSPI01G24510 vs. TrEMBL
Match: B9RVY2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1174060 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 5.2e-10
Identity = 54/150 (36.00%), Postives = 86/150 (57.33%), Query Frame = 1

Query: 103 LKFLMQHGSKNIASEKKLLREISSSRKKEI--RSTTVEELDVPIKKKNDEIENSHLYLYT 162
           L FL+ HGSK++A EKKL+RE    ++K      +T+  L+  I     +  +    +  
Sbjct: 115 LHFLLLHGSKSLAEEKKLIRETKKGKQKGPVGSCSTLGMLNASIWGLICQSYHCSYSIDE 174

Query: 163 TDFEGINKEMKRLEMVKEKAVANAAVGGKLWSSLGTKKDIQQKVN----VMYEELDELRL 222
             +  I +EM +L+ ++EKA+ANAAV G++W+SLG+K+ IQ +V      +  +LD LR 
Sbjct: 175 VQYRKIIEEMNQLKCIREKAIANAAVKGRIWNSLGSKETIQDEVKESKIELTGKLDRLRE 234

Query: 223 KQIETRNETKYGEKKLRIIQKQILYLHKQL 247
           K +  R + K  E+ L  IQK I  L ++L
Sbjct: 235 KGLAVRAKFKKSEESLEAIQKDINSLREKL 264

BLAST of CSPI01G24510 vs. TrEMBL
Match: A0A0A0KFC5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G094690 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.7e-08
Identity = 58/158 (36.71%), Postives = 88/158 (55.70%), Query Frame = 1

Query: 101 RKLKFLMQHGSKNIASEKKLLREISSSRKKEIRSTTVEELDVPIKKKNDEI-ENSHLYLY 160
           +KL F + HG KN+A E+ LLREI +S+ K+    TVEEL  PI++  +++  N      
Sbjct: 227 QKLSFSIVHGRKNMADERNLLREIKASQGKD-DGMTVEELYAPIQRLKEQMCYNYRDCAK 286

Query: 161 TTDFEGINK----EMKRLEMVKEKAVANAAVGGKLWSSLGTKKDIQQKVNVMYEELDELR 220
             D    NK    ++K+ ++ +EKA+A+A V GKLW+SLG++K I  +  +  E   E  
Sbjct: 287 AADDAARNKTILKDIKQHQIAREKAIADAVVNGKLWNSLGSQKAI--RAELQEEHSYEYN 346

Query: 221 LKQIETRNETKYG------EKKLRIIQKQILYLHKQLE 248
             Q+E  N  K        +KKL  I+K I  L K+L+
Sbjct: 347 SGQVE-HNHKKINIKIIKLKKKLEKIEKDISSLQKRLK 380

BLAST of CSPI01G24510 vs. NCBI nr
Match: gi|659068881|ref|XP_008446869.1| (PREDICTED: proton pump-interactor 1-like [Cucumis melo])

HSP 1 Score: 284.6 bits (727), Expect = 1.6e-73
Identity = 161/237 (67.93%), Postives = 181/237 (76.37%), Query Frame = 1

Query: 1   MKWSVSNLKFQEETIKREVKLKVEELNKLHPSLDKLSFANNAYRVIKPKSTSCLSVGEFD 60
           MKW VSNLK+QEE IKREVKLKV+ELNKLH SLDKLSFANNAYRVIKPKSTSCLSVGE D
Sbjct: 26  MKWCVSNLKYQEEIIKREVKLKVQELNKLHLSLDKLSFANNAYRVIKPKSTSCLSVGELD 85

Query: 61  NKSSISLPPCLELGYDYVSLTALAICWRGTLLQQNFQSSTRKLKFLMQHGSKNIASEKKL 120
           +K         +L +               L+Q   ++   + K L +  S         
Sbjct: 86  SK---------KLKF---------------LMQHGSKNIANEKKLLREINSS-------- 145

Query: 121 LREISSSRKKEIRSTTVEELDVPIKKKNDEIENSHLYLYTTDFEGINKEMKRLEMVKEKA 180
                  +KK+IR+TT+EELDVPIKKKNDEIENSHLYLYTTDFEGIN+EMKRLEMVK+KA
Sbjct: 146 -------KKKKIRTTTIEELDVPIKKKNDEIENSHLYLYTTDFEGINEEMKRLEMVKQKA 205

Query: 181 VANAAVGGKLWSSLGTKKDIQQKVNVMYEELDELRLKQIETRNETKYGEKKLRIIQK 238
           VANAAVGGKLWSSLGTKKDIQQ+VNVMYEELDELRLKQIETRNETKYGEKKLRI+++
Sbjct: 206 VANAAVGGKLWSSLGTKKDIQQQVNVMYEELDELRLKQIETRNETKYGEKKLRILKR 223

BLAST of CSPI01G24510 vs. NCBI nr
Match: gi|700210774|gb|KGN65870.1| (hypothetical protein Csa_1G534760 [Cucumis sativus])

HSP 1 Score: 272.3 bits (695), Expect = 8.3e-70
Identity = 144/145 (99.31%), Postives = 145/145 (100.00%), Query Frame = 1

Query: 107 MQHGSKNIASEKKLLREISSSRKKEIRSTTVEELDVPIKKKNDEIENSHLYLYTTDFEGI 166
           MQHGSKNIASEKKLLREISSSRKKEIRSTTVEELDVPIKKKN+EIENSHLYLYTTDFEGI
Sbjct: 1   MQHGSKNIASEKKLLREISSSRKKEIRSTTVEELDVPIKKKNEEIENSHLYLYTTDFEGI 60

Query: 167 NKEMKRLEMVKEKAVANAAVGGKLWSSLGTKKDIQQKVNVMYEELDELRLKQIETRNETK 226
           NKEMKRLEMVKEKAVANAAVGGKLWSSLGTKKDIQQKVNVMYEELDELRLKQIETRNETK
Sbjct: 61  NKEMKRLEMVKEKAVANAAVGGKLWSSLGTKKDIQQKVNVMYEELDELRLKQIETRNETK 120

Query: 227 YGEKKLRIIQKQILYLHKQLEIIYP 252
           YGEKKLRIIQKQILYLHKQLEIIYP
Sbjct: 121 YGEKKLRIIQKQILYLHKQLEIIYP 145

BLAST of CSPI01G24510 vs. NCBI nr
Match: gi|659119830|ref|XP_008459865.1| (PREDICTED: proton pump-interactor 2-like isoform X1 [Cucumis melo])

HSP 1 Score: 105.5 bits (262), Expect = 1.3e-19
Identity = 91/246 (36.99%), Postives = 135/246 (54.88%), Query Frame = 1

Query: 1   MKWSVSNLKFQEETIKREVKLKVEELNKLHPSLDKLSFANNAYRVIKPKSTSCLSVGEFD 60
           ++W + N  + E TIK +     E L+ LH  LDKL+FANNAY+  KP + SCLS GE D
Sbjct: 95  LRW-MRNYDYYELTIKWQK----ERLDILHLYLDKLTFANNAYKE-KPVN-SCLSSGEVD 154

Query: 61  NKSSISLPPCLELGYDYVSLTALAICWRGTLLQQNFQSSTRKLKFLMQHGSKNIASEKKL 120
            +        +EL   +     L IC     L     S  +KL FLM HG KN+A E+KL
Sbjct: 155 KRVL-----SIELFLVHFCDALLLIC-----LYVIDLSCEQKLHFLMLHGCKNMADERKL 214

Query: 121 LREISSSRKKEIRSTTVEELDVPIKKKNDEIENSHLYLYTTDFEGINKE--MKRLEMVKE 180
           LRE++ S+ K+    T++EL  PI++   +        +   F G + E   K+ E++ E
Sbjct: 215 LREVNESQGKD-GGITLDELHAPIRRLRQQ--------FPMYFRGESDEDPRKQHEVIIE 274

Query: 181 KAVANAAVGGKLWSSLGTKKDIQQKVNVMYEELDELRLKQIETRNETKYGEKKLRIIQKQ 240
           KA+ANA V GKLW+SL +KK IQ+++  +     +LR +Q +T  E +  + +L  ++K 
Sbjct: 275 KAIANAVVNGKLWNSLSSKKSIQEEIEKLKNTSFQLRERQRKTNAEIRKVKLELEKVEKD 314

Query: 241 ILYLHK 245
           I  L K
Sbjct: 335 IRSLQK 314

BLAST of CSPI01G24510 vs. NCBI nr
Match: gi|743884696|ref|XP_011037343.1| (PREDICTED: uncharacterized protein LOC105134583 [Populus euphratica])

HSP 1 Score: 100.1 bits (248), Expect = 5.7e-18
Identity = 63/148 (42.57%), Postives = 95/148 (64.19%), Query Frame = 1

Query: 101 RKLKFLMQHGSKNIASEKKLLREISSSRKKEIRS--TTVEELDVPIKKKNDEIENSHLYL 160
           R L F + HGSKN+A+EKKLLREI +S K +I S  ++++E+D  I   N  +       
Sbjct: 136 RNLNFKLLHGSKNLAAEKKLLREIKASEKGKIVSLWSSLKEIDSSIYPLNYRLLYGCYNA 195

Query: 161 YTTDFEGINKEMKRLEMVKEKAVANAAVGGKLWSSLGTKKDIQQKVNVMYEELDELRLKQ 220
            T   E I KE++ LE+ KEKA+ANA V GK+W+SLGTKK +Q+++    +EL +LR + 
Sbjct: 196 STVGDESILKEIQHLEITKEKAIANATVKGKIWNSLGTKKALQEEIEFHAKELVDLRKQH 255

Query: 221 IETRNETKYGEKKLRIIQKQILYLHKQL 247
           +  +   K  EKKL  ++K+++ L +QL
Sbjct: 256 LFLKASIKKVEKKLPAVEKRLISLERQL 283

BLAST of CSPI01G24510 vs. NCBI nr
Match: gi|566201135|ref|XP_006376483.1| (hypothetical protein POPTR_0013s13410g [Populus trichocarpa])

HSP 1 Score: 97.1 bits (240), Expect = 4.8e-17
Identity = 61/148 (41.22%), Postives = 95/148 (64.19%), Query Frame = 1

Query: 101 RKLKFLMQHGSKNIASEKKLLREISSSRKKEIRS--TTVEELDVPIKKKNDEIENSHLYL 160
           R L F + HGSKN+A+EKKLLREI +S K +  S  ++++E+D  I   N ++       
Sbjct: 137 RNLNFKLLHGSKNLAAEKKLLREIKASEKGKTVSLWSSLKEIDSSICPLNYQLLRGCYNA 196

Query: 161 YTTDFEGINKEMKRLEMVKEKAVANAAVGGKLWSSLGTKKDIQQKVNVMYEELDELRLKQ 220
            T   + I KE++ LE+ KEKA+ANA V GK+W+SLGTKK +Q+++    +EL +LR + 
Sbjct: 197 STVGDKSILKEIQHLEIAKEKAIANATVKGKIWNSLGTKKALQEEIKFHAKELVDLRKQH 256

Query: 221 IETRNETKYGEKKLRIIQKQILYLHKQL 247
           +  +   K  E+KL  ++K+I+ L +QL
Sbjct: 257 LFLKASIKEVEEKLPAVEKRIISLERQL 284

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LVC7_CUCSA5.8e-7099.31Uncharacterized protein OS=Cucumis sativus GN=Csa_1G534760 PE=4 SV=1[more]
B9N5V7_POPTR3.3e-1741.22Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s13410g PE=4 SV=1[more]
A0A0A0K9L8_CUCSA5.0e-1336.49Uncharacterized protein OS=Cucumis sativus GN=Csa_6G094680 PE=4 SV=1[more]
B9RVY2_RICCO5.2e-1036.00Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1174060 PE=4 SV=1[more]
A0A0A0KFC5_CUCSA3.7e-0836.71Uncharacterized protein OS=Cucumis sativus GN=Csa_6G094690 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|659068881|ref|XP_008446869.1|1.6e-7367.93PREDICTED: proton pump-interactor 1-like [Cucumis melo][more]
gi|700210774|gb|KGN65870.1|8.3e-7099.31hypothetical protein Csa_1G534760 [Cucumis sativus][more]
gi|659119830|ref|XP_008459865.1|1.3e-1936.99PREDICTED: proton pump-interactor 2-like isoform X1 [Cucumis melo][more]
gi|743884696|ref|XP_011037343.1|5.7e-1842.57PREDICTED: uncharacterized protein LOC105134583 [Populus euphratica][more]
gi|566201135|ref|XP_006376483.1|4.8e-1741.22hypothetical protein POPTR_0013s13410g [Populus trichocarpa][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0010155 regulation of proton transport
cellular_component GO:0005575 cellular_component
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005886 plasma membrane
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G24510.1CSPI01G24510.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 197..217
scor