CsaV3_1G036760 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G036760
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Descriptionsignal recognition particle 14 kDa protein
Locationchr1 : 22616384 .. 22626330 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGGGGAGGTTGCACCGGCGATTTATGTGTCCAAGGGGAAATCGAGGGGGTGGGATTATCGGCGGAGATTAGAGACTATTTTTGAAGAAGGATCTAATTCTAATAGTTCTTCAGAGAGGAATAATAATGATAATATGGATGTTGTTGTTGTTGTTCCTAAGACCATTTTTTGCTTCCTTCCTCTTCTTGTCTCTTTTCTCTCTTATTTTTTGCTTTTTAGACAAACACTGTAATTGTTCATTGTAATAATTCGAATTTGGGATTTCCTGTCTTTACTCCAATCGTTCCCTTCTTCTTTTTAGTTTAATTATTTGGGATTTGTTCAACATCAGAATTAATATATTATAGATCTGTGTAAGGTTGTTTCGATCCTAAATTTACATTAACCCGTCGTGGTAGTGGTCGTGGACGGAGCAATTAGGAAAAAAATTAATATTGGGAATATAAATTCAAATCGCTAAGTTCTTGATTAACTGATGTATAAGAATTTTGATTATCGGTATAAAAATCTCTCTATTCTAAGGACAAAGAGAAAAAAAGTCGTTAGTTCTTACCAAGATTTAAAATATGATTATCCTCCGAATATGTAGTTTTGATTTTATCTTAATTATGATAAAAGTATTGAGAAAATATGGATTTGTTTTTGTTTTCAGAAAATTATAAGAACAAAAAAGATATTGCATCACTTTCAAATAAACAAACAAACTTATTCTTTTACATTATATTTATGTTAATTATAACAAATTTACCAAAGGAAATGATACGGTACAGTGGAAATAAAGAGTAGGATTTAAAGAAAGGGAATTGAACTTTTCCTTTGTTGAAGATGGATAATGGATACTTCACGATAAAATATTGGTGCCTAAAAAATGGACAAAGCTCAACCCAGCAAAAAATGAGCATACGAATAAAGTAGAACGAGGAATGAAGTTAGACTCTGATTGTATCAGTATTAAATCATCAATCTCTCCCAAAACAACTTAGAATTAAAAACTCCAGTATATGTATTTGCATTTGATGACTCCAACTAGAATTTGGAAGTCAGAGTCCAGCTAACCATTGTTTACTTCCCTTTCAGCAACCAAATTTAATCGACTGATTTAAGAAGAGCTAAAAGCCTCTGTAGATACCACATCTCCATCCCCCATCTCTATGCATGGATTTTGAAAACACCAATTACCATGGCTAGGATCCTACGTTGAGATAAATACTTTAAATTAACACAAGAAATGTTAAATTATCAATAGTAAGTTACATACCAACTTCTATTGAGGATGATGACGGTAAAATGGCTCTGTCTAATTGTGGCTATTTGTTTCTTTTGTTTCTTCCTCAATCAAAATGAATCCTGCTTATTGTTTTGGTATATCAAGTACCATAACCCTATCTCTCTTAGGCTAGTTCAATTAGGATTCCCATTAAATCCTAATCATACTTCTTACTATATCTTTAATTGTTATATTTTGTCTTTTCGCCACACCATTCATGCTGGATTTCCCTACTAAAGTATATTGCGTTTTCACGTTCTTAGGTATTTGGTAAAGGGTCCGTTCACCTGATCTATCATATTTGTCGTAGTATTCACCACCACGTTCAAATTTAACAGCTTTAATTTTCTTTCCAATTAGTTGAAGTTTAACCTTAGCTTTAAAAGACTTGAAAACGTCCAAAGATTGAAAAAATTCTCTTGATTAAATATAGGTACTCGTATCTTGAATAATCGTCTATGAACGTAATAAAGTATTGTTGTCCATTCCAAGAAATCATAGGAAATGGACTACAAATGTTTGTATGTATTAGTTCTAAGACGTCTGAACACCTGTTGGCACCTAATTTTCTTATGTTTAATTTGTCTGTTTTTCCTTAATGTATTTCACACAAACTTCATATTTACTTAAATCAAAGAAGTCAAGAATTCTATTTGACATAAGTCTCTGAATTATTTGTTTAGAGATGTAACATAAATGTTTGTGTCACATCATAGTAGAACTCTCATCTAATTTACACTTTGTACCACATGATTTAGACGAGAGAACCTTGTTACATGAAACATAAGAATCAAGCATGTATAGGTTATCAATTAAAGAACTAGTACCAATAAACTTGGAGTTTTGAAAAAGACTAACTTTATTATTTCCAAAAGAACAAGAAAAATAAAAATTTCCAAATTGGAAATAGAAACTAAGTTTCGTCAAAATGATGGTACAATAAAAATCTCATTCAAATCCAAAAACAACAAGTTTTTAAAAGTAATAAAAAATTGCCAATAACTTCAATTGTAATTGCTTTGCCATCATCCACATAGATGAATCTTTCAGCATCATTTGGCAGACGGATCCACAGACAACCCTGCATGGATATACTTATTTGAATAGAAATACAGAACCTACCTACCGAGTATCTATAGGTACAGAAGCTAAATTAACTTCAGAACAAATCAAAATAAGAAGTTTACCCTTCTTTACACCATTTGGCATACATGGGACAATCTTTCTTTAGATGACCTTTCTTTTTGCAGAAGAAACAAAGATTCTCCGTAGCTTGTTTCTTATTCTGTTGAGATGTCCCTTCTACAACATCTATAGGTTTTCTTTTCTTCTTACCATGAAAGTTAGTTGACAAGTGAGCACTTTCTATCCTTTCTCTCTTAATCTTATCTTCTTCTTGCACATATTGTGAGATAAGCTCGTTAATACTCAATTTATCCTTCTGAGTATTATAACTTATCTTAAGCTGAGTGAATTGTGCAGAAAGATAGATAAGTACCAAATATACGTGTAAATTGCCTTTAATTTACCAGTGAGATTAGACATTTCCATAATGTATTCCCTTATGTTTCCATTGTCCTTATACCTCATGGAAGTTAAAGTAGTTAAATGACAACTTGCTTCTCCCTTTTTCATTTTTAGCAAAATATTTTTCAATTTTGACAAGCAACTTTTTGGCATTTTCACTTTTAGTAATAGAACCTCGAAAAGACTATGGAATGGAGTGCCTAATAATCATTAGACACATGTGATTTGACCGTTTACACATCTCAATATTAGATGTATTCAGTTGTTCCTAAGTAGAAGTAGGTTATTGGTTCTTAATGCAAGGTCCAGATCCATACACCGAGAAGTATCTCTAGACTTTCCTTCTAAATCTTGAAATTCGATCCATTCAACTTAGGGCTTGAATTTAGATTTCCATATATTCCAGCAAGACCAACTAAATAAAGAACAAACAAATAAATGATATACTCACAATTAATGATGTCATAAATAAAATATTACAAAATAATTTCATATAATGTGAGCCCCTTATACAAGATACCCTAGCACAACATTGATGTCCAACCTTTCCGGTAGAGAGGTAGAGACATCAACTGTAAATGGTACTCTCAATGTAGTAATCAAAGGATTGACAGTAAACTTTGTAAAAAAAATCGTCTTTCTTTAGACCGACTATTTTTCATATGAGTAATTCTTATAATTGTCACATACTCATTATCACACGCATTCTCATAATTTGGCCAAATAATTATCTTTCTTTGGACCGATAAGTATTCGTATAATTAAATGAATGAATATGCACATTCTATATTTTAAAATTAAACTAATTTAGATAAGGCTACTTTGGTAATATGTTATTTTGACCAATTCAATCTAAAATATAAGACACAATAACAATAATTTTATTATTGTAAAAAATAAGAGGAAGAACTCCAAATAATATTTACCAAAATTCACCTAATAATTGGGTACATTAAAAATATAATTAATGTAACATAATCATATGAATATCCCAAAAAAAATATCACTTGCAAGTTTAATCGAGAGGATAATCAATTAATCTTGATCAAATTAAACATGAATTCACAACCTGATTAATCAAATCTTGAATCTAAAACCATTAAACTTTAAAACTACGATATGATTAATCAAGAAATATTAAACCTTAAAACCATAATATATTTAAACAAATCTTGAATCAAGAAAGATTAAACTTTGAAACCACAATATGATTAATCAAATATTGAATTAAAAACCAATACAAAATACACATATTCCAACAATTCAACATGAAATTAATGCTATGATACCACTTGTTGGTATAAATACTTTAAATCTATATAATAGATTAACCCAAGATCGTCCATGTTAAATTATCAAGAATAAGTTACATATAATATTCCATTGATGATGGTTGTAAAATGGATCTTGTCTAATGACTATAAAATAGATCTTGTCTAATGACTATAAAATGACTATTGTCTTCCTCAACCAAAACTCTGAATGCCCTTTTTCTTGATAAGATACAAGAAAGACCGATTGCTTATTATTTTGGTATATTGGGGATCATAGCCCTAACCCTTTTTATATACTAGTTCAATTAGGATTCTCTTTAAATCATAATCAGTCTAGGAACAAGCTTCTACCCATTTAATTCATGCTCAATTAGGAATCTAGGGCCTTAATTAATTAGATCACATAATAGGTTTAATTTCATAAAATAACTCAACGTGATAAATTATTAATTCACATATAATAGCTCACATTTTAATTAGACGTATTATTTAAATATGCCTAATATCCCACACAATTTCTCCTGACCCAGTTCTATTCTCCTTTCTATTAAAAAATGATTTAATTAATTATAATACATATGTTATAAAATGGAGAGACAGACCATAAAAGAAGAAAATATAGAAATAACGTATGTATTATGTCGATTGTGGTGTATCTTAAAAAACTTCATGGCAAAAACTATTTAAGATCTAACTTTTTATTAGTTAGGTCGTATAACTTGCATCTTCATAACCATCAAGATTAAACTTAGCTGACCACCGAGATTAAACTTAGCTAGATTTGTTAGAAAAAAATAAACAACATATCTCTCGTTATGGAAGATAGAAATTAGATAGAAATTAGAAATTAGTATAATAGTATAATATAAATATATATATATAAACAACAAAGATAGAAATTAGAAAATTAAAAATCACTCAAATTTCTTCATTATCTCTCGTTAATTTAGAAACTCGTCCATATCAAGTGGTCTTTACAAATCCATCAAAACCTTCTATTTATAGTTAACTTGGCAGGTAGGAGGTAGATTATATGACCTCTAAAAGACTATGTTTGACACATGGTGGACACTAAGCACACTAATGGGTTGACATGTGACTATGGCCGCTAAGCACACTAATAGCATCTACTTATATTAATATTATTTATAATAAAATATAAATTTTCATCACATGTAGATTTTTTAATTTTCAAATCTTCGTTATGTAAAGTTCAGTGTTACCTTTTGAAAGAAAGAAAATTTTTAATCTTCATTCTCTTTGGGATGCTTCGATTTATCTAATAATAAAAATCATCGTTCTCAACCATTCTACGAATGAAATAGAAACAATAGAAAAATGTAAAGTTATTTTCAAATATAACAAAATAAGTAAAAGTAATAAACTACAATATGTGTCTAATTAATTACTTTTGGAAGCTTTATTCTTTAAAATAATTTTTCGTTTTAAATATGTTTGATCTGAACATTTATTAAAATATCCAAGAAGAATAAAAAATTTAACATTTAAATTTTAAGTATTAAATATCAATATTATCTTTTAAAAAGAAAAGAAATATAGAAAAGTATTTTTGATTCGTGGAGGTGTTAAGAATGTGTTTTTAAGTTTCAAAAGGTCATCGACTAAAAAATTTATTAAGAGTGTAATTGTGTTCGTTTGGAAGGAGTTTGAAAGTTTTTTATTTGATAAATCTGAATTTTCGATTTGGACAAATTGACCATTCAAAACCGAGATAAGATGTTCAACATAACTCAACCCTCAAAATTCAAACCAACTTCAATATCTATGTTATGTATCGAACCAAGTCGATTTATTGTTGATGGTTCGGTGGTTTACTTACCGAGAACCAAATTAACGGTTCGGTTGAACCGAACAGATTTACACCCTTAGCCTGGCGACTAGGAAGTCCAATTTTGTTAGCAAAAAGAAAGTATAATCGTTTTCCCTTTCGCCGTCGCTCATTTTCTTCTCCGTTCAGCGGACGTCGATCGGATCACTTCCTCGTACTTTTCAAGATCCGCTCCACATCCATTGCCATGGTAATTTCCTGTTCTCTTCGTCTTACTCATGTCTTGATTGAATTCTTACGTATTTTCACGATACGCTCTCCTAATCTGCATTTTAATTATTCATCTTCATGTCAGAATTTAACCTAATCAACTGAGAGTTTTTGTGTCGGTGTTAGTTTTGATGATTCTTAGACAGCCAACTTGTTTTTACTTCCGTTTGGATATGTATTTACATGCCTTTTTTAGGATTTTGCTTGTTGATTATTGCAATTATGGGTCTATCTTTTAGTGTTCTGCATATGCATCAAATCCAAATTGCATGTTCTGCATTGCACCTTTTCTTCAGTTCCACCGCCACTTTTCGGTTGGGTGACGTCTACTTTTCAATGGGTTCTTTCTATTTTAGCGGATACAATCGAGCCTAGCAGTGTTTCTGATCTTAATTATAATATAATGTCTGATTGGTTACGTTATTGGGTCTTCATTGGCTGATAGTCTCGGTGTGAATTCAGTTCTGTTTAACGAAATTCAGTTCTCTCATTCAATTTTGACAAAAGGAATTTCTCGAATTTGCCAAGACCAGATTCTTCAATGGGAGTTAGGTTTGTAACAAACTTTCTTTCAATGTATTTAATCCTTAAGGGTGGAGAATAATAAAATAATATGTATCTAACGGCAGATGGTATTGGGTAAACTAAGATAGAAGGTTCAAGTGCTATGTCACATCATTTGGCCCCTTGAGCATTGCACTCGCCCTTGGGTTTATTTGGCCAATTCGTATTCTTATGTGGCGTGGTACTTTGATAAGTCTTCGAGTAGCTAAACTATATAAATGTCTAAATTGTTTGGTATTCAAATTGTATCCTATTGTTTGTTATAAGTTCCAATTGGGCTAGATGTACCACCCTGTAGTTCTCTGGGAATTGCTTGGTTCACCTGTGCTTGTTTGGAGTTCTGCATATTTTGCATTAGGCATAAAAAGTTTTTTCTTTTGACACTTCCTCATGCCCCTATTAATTTTCTCTGCCAATGGTCCAAGAGAAAGAATTTAGGATCTCTCTCACTAGAGGCTTTATATGTAGACTTAACTTTCCTGTTGTTGAATTTGAATCTGTATTGAGCTAAAGTCCTGGTGTTGGGGTGTTTCTTATTCCCATTGTAATGGCCTAATAGGTTCCCTTTTATTTAATACAAAGTAATAAAAGGAAACTCAAGAACACTTCAATAGAACCCTAACCCTCTGCCCTTCCTTTCTTTCACTATTTATAACCATCTACCTGTCTATATAACTATCTACCCTTAGCCCTATCTAAATCTAGGTATCTAACAGTTCCCCAATGTTTTCTTTGTAACTTTGTTTGATAAAATTATCTTTCATTGAATTGAAAAGCTATTGGGTTTGTTGATCACTAACCATACAAATTATTTCTTCAAACGGGAAGTGATCCCACTGTTTGTATACGCTCACCAAGGCATACAGTCATTGTCTTTTTGCTGCTACGTACTCCAACATTTTCTAGGCTTACTTAGCTTCTCTGCTCTCATTAGGCAAACCAAATTTAAAAGGTTTCCATTTCAGGGTTCCAAAACCTTGCTGCTGCATTTGACTTAAATGAAACCTGCCACTAGAGCTAACTTATTGCACATTTGGAAGGAAAGAAACAACAGAATTTTCAATGACAAGTATAGACCTTTTGTAAATTTTCTGATCTTACTGAGTAAAAAATGTGACACAAGTAAAGTGCCTTACAAATAGTACGTAGATGCACACAGATTTTTATAATTAGTCCACTTTTACGGTATAGTGTTATTTCTTTACAAGGAGACGTCACAAAGGCATCTCTGTGTCTCTAAACAAGTGGTGCCTGATAGTATTTCTTATGTTAATTCACCCATGTTATAGCTTGCTGTAGCATTATTGTCCTTTAACTGGTTAAGGTATTATAACCTTGACAAGAAATCAGAGGTTTGGATTCCCACTCCCACATATTCTTTACTCAAAAGAAGAAGACAAAAAGGAAAGAAAGGAAAACTAAACTATAGGGCAGAAAAGATCAACAACAATAAATTGAAATTACAGAACCATGACAATGCAACCTCCGAAAAAGATCATAAACAGAAAACGCTCAAATGAAGAACAGATTATGTATTTTCACTCCTTTTAATTCAAAATTAAGTAAATAACGGTGCTAAATTAATCACATTTCATAGGATTATTAGAGACTGTCTCTTACTTCCTGGCTAGATATTTTATGATTGATTTTTCTTTGATGAAAGTATCTGTTTTTTGTCAACTGCGGTAAAAGATGTCAGATTTTCAGTGTTACAATGTGAGTTTTGGCCCAAGATAGACTATTGGAATTGTGTATAGTTGCCTAAAATTCACTACATTGTGGAATGTTATTGCAACGTCCTGTTTCTACTTGGATGTAATGTGTGCAGACGACGATTGTGGTGCTTCCATGTCACTTTGAGGATTAGTGGAAGATTTCAAATTTATTGAAGATGTATGCATGTATACTATTTGAATCTGAAAAAAAAAAAAGCCTTTAGGATTTGCAGCATGTTGCTTAAAATGACTAGCACACCATCACTAATTAAATGGAAAAGTGACAACTACATATTATCTGCTAAAGAGCAATAGAAAAAACAGTAAGCATGGTTGCTATATCAAGTTTAGTCATTGTCTTGATGATGTTTGGACCAAAGTTGAATTGTCTTTACTTATGGAATTTATTTGTCTGAATAGCAAGATGTGCATAATAGCATTATTTGTTTCACTGATATTTGAACCATAATGAAAATCGCTTGAATTGTGGACTTTTTCCATCCAAATTCTGAGATGTAGGCATCATTAGCATTCTATGTTTCATTCAACAACAAAATATTGTGGCTTGATTATGACCTCGTTAAGTTCTTATTCTTTTGGTTTAGGTTCTACTGCAGCTAGACCCTTTTCTCAATGAACTTACCAGCATGTTTGAGCGTAGTACCGAGAAGGGTTCAGTGTGGGTTACTCTAAAGCGATGTATGTGCATATCAGTGTATTTTTAAAATTAATTTCATATATTTTTGTGGTAATTTTTAGGAGTCTGATTAGGTTCAAACTCTATTGTCTCTGATTGATGTAGCATCATTGAAGTCCAAGGTGCAGAGAAATAAAATGACCACTGCTGGTCAACCTATTGAGTATAGGTGCCTCATCCGTGCTACAGATGGGAAGAAGACAATTTCAACTTCCGTAAGTATTGACTCATCTTTTAAGCTTGTTTCCCCTTCCCTTTTCTATCTTTTCTGAATTGAAAACTTCGCATAAGAATTCAAGTTTTTGTAGTAAACTCTAAATTTACTCGGGCTGAAGCAAGTCTCACTGAATTGAAGAGTGCTGTGTTTATACATCGTTTCTTTTTACTCTATTTATGTTCTACTTTAATTTTGTATTACAACTCAATGCAACACAGGAGTGATGGTGAAGTAATATATGGATTCTACCCCCTTTTCATCGTCACTCACTGCTTTATGAATTAGTTTTTTCTTCTGCTTGAGCTTTGAATTATCTTTTACTCAGTTCATTGTTTTTAGCAAACAGAAGAACCAAACCCCTTTTGTAGGACTTCAATCAGCATATATCCCTTTCACATTCTTCAGATCTTATTATCTGTTTTAACTTTCTTGAATCTGAAACATTTGTAACAACTTCTGCTGAACTGGCTAGGTTGGTGCAAAAGATCATCTGAGATTTCAAGCTTCGTATTCAACCATTCTTAAAGCCCACATGACTGCTCTTAAAAAGAGAGAGAGAAAGGACAAGAAGAAGGCAGCAGAGGCCGAGAAGGGTCTGAAGAAAAAACCCAGGAAAGTATAA

mRNA sequence

ATGAAAGGGGAGGTTGCACCGGCGATTTATGTGTCCAAGGGGAAATCGAGGGGGTGGGATTATCGGCGGAGATTAGAGACTATTTTTGAAGAAGGATCTAATTCTAATAGTTCTTCAGAGAGGAATAATAATGATAATATGGATTATAATCGTTTTCCCTTTCGCCGTCGCTCATTTTCTTCTCCGTTCAGCGGACGTCGATCGGATCACTTCCTCGTACTTTTCAAGATCCGCTCCACATCCATTGCCATGGTTCTACTGCAGCTAGACCCTTTTCTCAATGAACTTACCAGCATGTTTGAGCGTAGTACCGAGAAGGGTTCAGTGTGGGTTACTCTAAAGCGATCATCATTGAAGTCCAAGGTGCAGAGAAATAAAATGACCACTGCTGGTCAACCTATTGAGTATAGGTGCCTCATCCGTGCTACAGATGGGAAGAAGACAATTTCAACTTCCGTTGGTGCAAAAGATCATCTGAGATTTCAAGCTTCGTATTCAACCATTCTTAAAGCCCACATGACTGCTCTTAAAAAGAGAGAGAGAAAGGACAAGAAGAAGGCAGCAGAGGCCGAGAAGGGTCTGAAGAAAAAACCCAGGAAAGTATAA

Coding sequence (CDS)

ATGAAAGGGGAGGTTGCACCGGCGATTTATGTGTCCAAGGGGAAATCGAGGGGGTGGGATTATCGGCGGAGATTAGAGACTATTTTTGAAGAAGGATCTAATTCTAATAGTTCTTCAGAGAGGAATAATAATGATAATATGGATTATAATCGTTTTCCCTTTCGCCGTCGCTCATTTTCTTCTCCGTTCAGCGGACGTCGATCGGATCACTTCCTCGTACTTTTCAAGATCCGCTCCACATCCATTGCCATGGTTCTACTGCAGCTAGACCCTTTTCTCAATGAACTTACCAGCATGTTTGAGCGTAGTACCGAGAAGGGTTCAGTGTGGGTTACTCTAAAGCGATCATCATTGAAGTCCAAGGTGCAGAGAAATAAAATGACCACTGCTGGTCAACCTATTGAGTATAGGTGCCTCATCCGTGCTACAGATGGGAAGAAGACAATTTCAACTTCCGTTGGTGCAAAAGATCATCTGAGATTTCAAGCTTCGTATTCAACCATTCTTAAAGCCCACATGACTGCTCTTAAAAAGAGAGAGAGAAAGGACAAGAAGAAGGCAGCAGAGGCCGAGAAGGGTCTGAAGAAAAAACCCAGGAAAGTATAA

Protein sequence

MKGEVAPAIYVSKGKSRGWDYRRRLETIFEEGSNSNSSSERNNNDNMDYNRFPFRRRSFSSPFSGRRSDHFLVLFKIRSTSIAMVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV
Homology
[Close]
BLAST of CsaV3_1G036760 vs. NCBI nr
Match: XP_004145229.1 (PREDICTED: signal recognition particle 14 kDa protein [Cucumis sativus] >XP_008444601.1 PREDICTED: signal recognition particle 14 kDa protein [Cucumis melo] >XP_023001491.1 signal recognition particle 14 kDa protein-like isoform X1 [Cucurbita maxima] >XP_023001492.1 signal recognition particle 14 kDa protein-like isoform X2 [Cucurbita maxima] >KGN65867.1 hypothetical protein Csa_1G534730 [Cucumis sativus])

HSP 1 Score: 220.7 bits (561), Expect = 4.5e-54
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0 

Query: 84  MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 143
           MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 60

Query: 144 DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 202
           DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV
Sbjct: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 118

[Close]
BLAST of CsaV3_1G036760 vs. NCBI nr
Match: XP_023519243.1 (signal recognition particle 14 kDa protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 219.5 bits (558), Expect = 1.0e-53
Identity = 117/118 (99.15%), Postives = 118/118 (100.00%), Query Frame = 0 

Query: 84  MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 143
           MVLLQLDPFLNELTS+FERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSLFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 60

Query: 144 DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 202
           DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV
Sbjct: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 118

[Close]
BLAST of CsaV3_1G036760 vs. NCBI nr
Match: XP_022927062.1 (signal recognition particle 14 kDa protein-like isoform X1 [Cucurbita moschata] >XP_022927063.1 signal recognition particle 14 kDa protein-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 218.8 bits (556), Expect = 1.7e-53
Identity = 117/118 (99.15%), Postives = 118/118 (100.00%), Query Frame = 0 

Query: 84  MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 143
           MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 60

Query: 144 DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 202
           +GKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV
Sbjct: 61  NGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 118

[Close]
BLAST of CsaV3_1G036760 vs. NCBI nr
Match: XP_022954536.1 (signal recognition particle 14 kDa protein-like isoform X1 [Cucurbita moschata] >XP_022954537.1 signal recognition particle 14 kDa protein-like isoform X1 [Cucurbita moschata] >XP_022994924.1 signal recognition particle 14 kDa protein-like isoform X1 [Cucurbita maxima] >XP_022994925.1 signal recognition particle 14 kDa protein-like isoform X1 [Cucurbita maxima] >XP_023541199.1 signal recognition particle 14 kDa protein-like [Cucurbita pepo subsp. pepo] >XP_023541200.1 signal recognition particle 14 kDa protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 212.6 bits (540), Expect = 1.2e-51
Identity = 114/118 (96.61%), Postives = 115/118 (97.46%), Query Frame = 0 

Query: 84  MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 143
           MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 60

Query: 144 DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 202
           DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKD+KKA EAEK  KKKPRKV
Sbjct: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDRKKAPEAEKDSKKKPRKV 118

[Close]
BLAST of CsaV3_1G036760 vs. NCBI nr
Match: XP_022140158.1 (signal recognition particle 14 kDa protein [Momordica charantia])

HSP 1 Score: 193.0 bits (489), Expect = 1.0e-45
Identity = 105/118 (88.98%), Postives = 107/118 (90.68%), Query Frame = 0 

Query: 84  MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 143
           MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 60

Query: 144 DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 202
           DGKKTISTSVGAKDHL+FQASYSTILKAHMTALKKRER         EK  KKKP+KV
Sbjct: 61  DGKKTISTSVGAKDHLKFQASYSTILKAHMTALKKRERXXXXXXXXXEKDPKKKPKKV 118

[Close]
BLAST of CsaV3_1G036760 vs. TAIR10
Match: AT2G43640.1 (Signal recognition particle, SRP9/SRP14 subunit)

HSP 1 Score: 168.7 bits (426), Expect = 3.7e-42
Identity = 85/98 (86.73%), Postives = 93/98 (94.90%), Query Frame = 0 

Query: 84  MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 143
           MVLLQLDPFLNELTSMFE+S EKGSVWVTLKRSSLKSKVQ+ K+++ G+ IEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFEKSKEKGSVWVTLKRSSLKSKVQKRKLSSVGESIEYRCLIRAT 60

Query: 144 DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRER 182
           DGKKT+STSVGAKDH RFQASY+TILKAHMTALKKRER
Sbjct: 61  DGKKTVSTSVGAKDHQRFQASYATILKAHMTALKKRER 98

[Close]
BLAST of CsaV3_1G036760 vs. Swiss-Prot
Match: sp|O04421|SRP14_ARATH (Signal recognition particle 14 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SRP14 PE=2 SV=2)

HSP 1 Score: 168.7 bits (426), Expect = 6.6e-41
Identity = 85/98 (86.73%), Postives = 93/98 (94.90%), Query Frame = 0 

Query: 84  MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 143
           MVLLQLDPFLNELTSMFE+S EKGSVWVTLKRSSLKSKVQ+ K+++ G+ IEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFEKSKEKGSVWVTLKRSSLKSKVQKRKLSSVGESIEYRCLIRAT 60

Query: 144 DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRER 182
           DGKKT+STSVGAKDH RFQASY+TILKAHMTALKKRER
Sbjct: 61  DGKKTVSTSVGAKDHQRFQASYATILKAHMTALKKRER 98

[Close]
BLAST of CsaV3_1G036760 vs. Swiss-Prot
Match: sp|O04433|SRP14_ORYSJ (Signal recognition particle 14 kDa protein OS=Oryza sativa subsp. japonica OX=39947 GN=SRP14 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.1e-30
Identity = 64/94 (68.09%), Postives = 81/94 (86.17%), Query Frame = 0 

Query: 84  MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 143
           MV+LQ DPFL+ELTSM+ERSTEKGSVWVT+KRSS+K + +  KM   G+ +EYRCL+RAT
Sbjct: 1   MVVLQPDPFLSELTSMYERSTEKGSVWVTMKRSSMKCQARLKKMAAKGEAVEYRCLVRAT 60

Query: 144 DGKKTISTSVGAKDHLRFQASYSTILKAHMTALK 178
           DGKK I T++ AK++L+FQASY+T+LKAHM ALK
Sbjct: 61  DGKKNICTALSAKEYLKFQASYATVLKAHMHALK 94

[Close]
BLAST of CsaV3_1G036760 vs. Swiss-Prot
Match: sp|P16254|SRP14_MOUSE (Signal recognition particle 14 kDa protein OS=Mus musculus OX=10090 GN=Srp14 PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 6.7e-17
Identity = 48/107 (44.86%), Postives = 75/107 (70.09%), Query Frame = 0 

Query: 84  MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAG-QPIEYRCLIRA 143
           MVLL+ + FL ELT +F++    GSV++TLK+   ++K    K +  G +P E +CL+RA
Sbjct: 1   MVLLESEQFLTELTRLFQKCRSSGSVFITLKKYDGRTKPIPRKSSVEGLEPAENKCLLRA 60

Query: 144 TDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAE 190
           TDGK+ IST V +K+  +FQ +YS +L+A+M  LKKR++K+K K ++
Sbjct: 61  TDGKRKISTVVSSKEVNKFQMAYSNLLRANMDGLKKRDKKNKSKKSK 107

[Close]
BLAST of CsaV3_1G036760 vs. Swiss-Prot
Match: sp|A6QQL9|SRP14_BOVIN (Signal recognition particle 14 kDa protein OS=Bos taurus OX=9913 GN=SRP14 PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.5e-16
Identity = 49/108 (45.37%), Postives = 75/108 (69.44%), Query Frame = 0 

Query: 84  MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAG-QPIEYRCLIRA 143
           MVLL+ + FL ELT +F++    GSV++TLK+   ++K    K +  G +P + +CL+RA
Sbjct: 1   MVLLESEQFLTELTRLFQKCRLSGSVFITLKKYDGRTKPIPRKGSVEGFEPSDNKCLLRA 60

Query: 144 TDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEA 191
           TDGKK IST V +K+  +FQ +YS +L+A+M  LKKR++K K K ++A
Sbjct: 61  TDGKKKISTVVSSKEVNKFQMAYSNLLRANMDGLKKRDKKSKSKKSKA 108

[Close]
BLAST of CsaV3_1G036760 vs. Swiss-Prot
Match: sp|P16255|SRP14_CANLF (Signal recognition particle 14 kDa protein OS=Canis lupus familiaris OX=9615 GN=SRP14 PE=1 SV=2)

HSP 1 Score: 86.3 bits (212), Expect = 4.3e-16
Identity = 48/107 (44.86%), Postives = 74/107 (69.16%), Query Frame = 0 

Query: 84  MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAG-QPIEYRCLIRA 143
           MVLL+ + FL ELT +F++    GSV++TLK+   ++K    K +  G +P + +CL+RA
Sbjct: 1   MVLLESEQFLTELTRLFQKCRLSGSVFITLKKYDGRTKPIPRKGSVEGFEPSDNKCLLRA 60

Query: 144 TDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAE 190
           TDGKK IST V +K+  +FQ +YS +L+A+M  LKKR++K K K ++
Sbjct: 61  TDGKKKISTVVSSKEVNKFQMAYSNLLRANMDGLKKRDKKSKSKKSK 107

[Close]
BLAST of CsaV3_1G036760 vs. TrEMBL
Match: tr|A0A1S3BBI8|A0A1S3BBI8_CUCME (signal recognition particle 14 kDa protein OS=Cucumis melo OX=3656 GN=LOC103487869 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 3.0e-54
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0 

Query: 84  MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 143
           MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 60

Query: 144 DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 202
           DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV
Sbjct: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 118

[Close]
BLAST of CsaV3_1G036760 vs. TrEMBL
Match: tr|A0A0A0LYE0|A0A0A0LYE0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534730 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 3.0e-54
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0 

Query: 84  MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 143
           MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 60

Query: 144 DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 202
           DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV
Sbjct: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 118

[Close]
BLAST of CsaV3_1G036760 vs. TrEMBL
Match: tr|A0A2P4KWJ4|A0A2P4KWJ4_QUESU (Signal recognition particle 14 kDa protein OS=Quercus suber OX=58331 GN=CFP56_31072 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.9e-45
Identity = 105/120 (87.50%), Postives = 111/120 (92.50%), Query Frame = 0 

Query: 84  MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 143
           MVLLQ DPFLNELTSMFERSTEKGSVWVTLKRSSLKSKV+RNKMTTAG+ IEYRCLIRAT
Sbjct: 1   MVLLQPDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVKRNKMTTAGEAIEYRCLIRAT 60

Query: 144 DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEK--GLKKKPRKV 202
           DGKKTISTSVGAKDH RFQASY+TILKAHMTALKKRERKDKKK AE +K  G  KKP++V
Sbjct: 61  DGKKTISTSVGAKDHQRFQASYATILKAHMTALKKRERKDKKKGAEGDKKEGGVKKPKRV 120

[Close]
BLAST of CsaV3_1G036760 vs. TrEMBL
Match: tr|I3SA11|I3SA11_LOTJA (Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.5e-45
Identity = 103/119 (86.55%), Postives = 111/119 (93.28%), Query Frame = 0 

Query: 84  MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 143
           MVLLQLDPFLNELTS+FERSTEKGSVWVTLKRSSLKSKVQRNK+ TAG+ IEYRCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSLFERSTEKGSVWVTLKRSSLKSKVQRNKLATAGEAIEYRCLIRAT 60

Query: 144 DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEK--GLKKKPRK 201
           DGKKTISTSVG KDH RFQASY+TILKAHMTALKKRERKDKKK+AEA+K  G  K+P+K
Sbjct: 61  DGKKTISTSVGPKDHQRFQASYATILKAHMTALKKRERKDKKKSAEADKREGSSKRPKK 119

[Close]
BLAST of CsaV3_1G036760 vs. TrEMBL
Match: tr|W9S9K7|W9S9K7_9ROSA (Signal recognition particle 14 kDa protein OS=Morus notabilis OX=981085 GN=L484_017067 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 7.4e-45
Identity = 99/117 (84.62%), Postives = 107/117 (91.45%), Query Frame = 0 

Query: 76  KIRSTSIAMVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIE 135
           ++R  S  +VLLQ DPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNK  T G+ IE
Sbjct: 45  RLRKKSPCLVLLQPDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKQKTDGEAIE 104

Query: 136 YRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEK 193
           YRCLIRATDGKKTISTSVGAKDH+RFQASY+TILKAHMTALKKRERKDKKKAAE ++
Sbjct: 105 YRCLIRATDGKKTISTSVGAKDHMRFQASYATILKAHMTALKKRERKDKKKAAETDR 161

The following BLAST results are available for this feature:
BLAST of CsaV3_1G036760 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004145229.14.5e-54100.00PREDICTED: signal recognition particle 14 kDa protein [Cucumis sativus] >XP_0084... [more]
XP_023519243.11.0e-5399.15signal recognition particle 14 kDa protein-like [Cucurbita pepo subsp. pepo][more]
XP_022927062.11.7e-5399.15signal recognition particle 14 kDa protein-like isoform X1 [Cucurbita moschata] ... [more]
XP_022954536.11.2e-5196.61signal recognition particle 14 kDa protein-like isoform X1 [Cucurbita moschata] ... [more]
XP_022140158.11.0e-4588.98signal recognition particle 14 kDa protein [Momordica charantia][more]
BLAST of CsaV3_1G036760 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G43640.13.7e-4286.73Signal recognition particle, SRP9/SRP14 subunit[more]
BLAST of CsaV3_1G036760 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O04421|SRP14_ARATH6.6e-4186.73Signal recognition particle 14 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SR... [more]
sp|O04433|SRP14_ORYSJ1.1e-3068.09Signal recognition particle 14 kDa protein OS=Oryza sativa subsp. japonica OX=39... [more]
sp|P16254|SRP14_MOUSE6.7e-1744.86Signal recognition particle 14 kDa protein OS=Mus musculus OX=10090 GN=Srp14 PE=... [more]
sp|A6QQL9|SRP14_BOVIN1.5e-1645.37Signal recognition particle 14 kDa protein OS=Bos taurus OX=9913 GN=SRP14 PE=3 S... [more]
sp|P16255|SRP14_CANLF4.3e-1644.86Signal recognition particle 14 kDa protein OS=Canis lupus familiaris OX=9615 GN=... [more]
BLAST of CsaV3_1G036760 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BBI8|A0A1S3BBI8_CUCME3.0e-54100.00signal recognition particle 14 kDa protein OS=Cucumis melo OX=3656 GN=LOC1034878... [more]
tr|A0A0A0LYE0|A0A0A0LYE0_CUCSA3.0e-54100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534730 PE=4 SV=1[more]
tr|A0A2P4KWJ4|A0A2P4KWJ4_QUESU1.9e-4587.50Signal recognition particle 14 kDa protein OS=Quercus suber OX=58331 GN=CFP56_31... [more]
tr|I3SA11|I3SA11_LOTJA2.5e-4586.55Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1[more]
tr|W9S9K7|W9S9K7_9ROSA7.4e-4584.62Signal recognition particle 14 kDa protein OS=Morus notabilis OX=981085 GN=L484_... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005786signal recognition particle, endoplasmic reticulum targeting
GO:0048500signal recognition particle
Vocabulary: Molecular Function
TermDefinition
GO:0030942endoplasmic reticulum signal peptide binding
GO:00083127S RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006614SRP-dependent cotranslational protein targeting to membrane
Vocabulary: INTERPRO
TermDefinition
IPR003210Signal_recog_particle_SRP14
IPR009018Signal_recog_particle_SRP9/14
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006614 SRP-dependent cotranslational protein targeting to membrane
cellular_component GO:0005786 signal recognition particle, endoplasmic reticulum targeting
cellular_component GO:0048500 signal recognition particle
molecular_function GO:0008312 7S RNA binding
molecular_function GO:0030942 endoplasmic reticulum signal peptide binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G036760.1CsaV3_1G036760.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009018Signal recognition particle, SRP9/SRP14 subunitGENE3DG3DSA:3.30.720.10coord: 84..201
e-value: 5.7E-38
score: 132.3
IPR009018Signal recognition particle, SRP9/SRP14 subunitSUPERFAMILYSSF54762Signal recognition particle alu RNA binding heterodimer, SRP9/14coord: 84..179
IPR003210Signal recognition particle, SRP14 subunitPFAMPF02290SRP14coord: 87..176
e-value: 3.9E-25
score: 88.0
IPR003210Signal recognition particle, SRP14 subunitPANTHERPTHR12013SIGNAL RECOGNITION PARTICLE 14 KD PROTEINcoord: 84..192
IPR003210Signal recognition particle, SRP14 subunitPRODOMPD009170coord: 84..153
e-value: 9.0E-29
score: 315.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 177..201