CsaV3_1G036680 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G036680
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	LOW QUALITY PROTEIN: NADPH oxidase activator
Location	chr1 : 22507250 .. 22508927 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GATGGATGGCTTTTGTCTTTACCATTTTTGTTTCCCCAAAAGGAGGCAGTAATGGCAGACATAATATCTCATTTGGTTTGAATGAATAATATTGCAGAAACAAACCCAATATCAACACCCATTAGATCAGCACATAATAAGAGGTACATTTGGCTCAACCTGTTCTGTTTTCTTAATTTGTTTTTTCTGTATGTTCCTCTCTCAAAACTCAAAGGGGGTGTATATGTTAATTTGAATTCCCTGTTTATAAAATCATACTTAAGTTGGATCTTAATTAAGGGTTAATAGTTAGATCCTAGATTAGCGATGATAAAGTTAATTGTAATATGCTTGTCCTCTTCATTTATGCCTTCGTTTTGGGGTCAACACTCAAAGCACACACATACACATGGACATCATCAATTCATTCATATGCATATGTGTGTCAGTTGTCTTTCATATTATCATTGACCAACTGTATTAATTTATCATGAGATTTGAGGTGTAATAAATATGAAGAAGAAGAAAAAAAAAAGAAAGACTTGCAGTAAGTAAAATATTTAAAAGAGATTATGATATTTTACTGGTTTCCTATACTTTTGGTTCTAGTTCATTTACTCGTAAAATAGTTATCTTTATTTTTCAAATCAATTTGTGATCAATGGATCAAAAATATGAAGCAAAGTTGAAATAGTATTTAAAAGTATTATTTGATTTGAACGGTTTGACCCATTCTGAGTATTAATTAAAAGAAAACATGTATGTATATATATAGGGGATAGATATTGGAAGTGAAATAGGGAGAGAGGAAAGATGAACATGGGGGGAAGAAATTCAGGTGAATTGGGAAGTGGAAAATCAGGGAAGATGAGGCTAAAGAAGCTAAGAAAAAGGGAGGACATGTCGACAATAATGGTAGAAGAAGAAGATTACCACACAGGATTATCAGCCTCAGTTCCATTCCAATGGGAGTCAGAACCAGGAACTCCAAAGGCTAATTTGAATGATAGGAATAGTAGATCTCTTCTTTCTCCTCTCACTCCCCCACCTTCCTATTTCTCCAATCATCTTATCATCAACTCATCCCCTATGATCCATCTTTCTTCTAAGCCTTCTTTTAATAAGCCAAGTTTCCTCAACACTGTCTTCAGAAAGCTTTCTGTGAAGCCCAGTACTCTCCAGCCTCCCTCCCCTGCTTCTTCCTCCTCCTCAAGCTCTACCATGGAAAGACGGAGATATGCAAGTCCTAGAAGATTGTCGTTTGACTCGAGAGTGGACGACGACGACGACGACGAAAATGAAGACGGCAACTTAGAATCACCTGTTTCTACTTTGTTCTTTGGACGTCGAAGTGATAAAGGATGCTACCCAAAATTGGTCAAGGTATTCACTAGATATTCTAAATGAAATTAAACAGACGAAGTACTTCATATGATATATTGAGAAGAGAGCTATATATATATATATATACTACATGCGTTTTGTTTTGCTTTTTGTTTTTTTCTTGAGTTTACCCGTTGATATAAGAGGGGATAGAAGAGAAGCATCAGTACTTGGGATCTTCATCATACTGTTCATATTCTCCTTTCATAAACAAAAATGTATTCCATCATATATGATTGCACATATTTCAATTCCATATATCACTGTTCTTGGCTCTTATGACCTTTTAATTTATATCCCAAATTAATTAACCCAG

mRNA sequence

ATGAACATGGGGGGAAGAAATTCAGGTGAATTGGGAAGTGGAAAATCAGGGAAGATGAGGCTAAAGAAGCTAAGAAAAAGGGAGGACATGTCGACAATAATGGTAGAAGAAGAAGATTACCACACAGGATTATCAGCCTCAGTTCCATTCCAATGGGAGTCAGAACCAGGAACTCCAAAGGCTAATTTGAATGATAGGAATAGTAGATCTCTTCTTTCTCCTCTCACTCCCCCACCTTCCTATTTCTCCAATCATCTTATCATCAACTCATCCCCTATGATCCATCTTTCTTCTAAGCCTTCTTTTAATAAGCCAAGTTTCCTCAACACTGTCTTCAGAAAGCTTTCTGTGAAGCCCAGTACTCTCCAGCCTCCCTCCCCTGCTTCTTCCTCCTCCTCAAGCTCTACCATGGAAAGACGGAGATATGCAAGTCCTAGAAGATTGTCGTTTGACTCGAGAGTGGACGACGACGACGACGACGAAAATGAAGACGGCAACTTAGAATCACCTGTTTCTACTTTGTTCTTTGGACGTCGAAGTGATAAAGGATGCTACCCAAAATTGGTCAAGGTATTCACTAGATATTCTAAATGA

Coding sequence (CDS)

ATGAACATGGGGGGAAGAAATTCAGGTGAATTGGGAAGTGGAAAATCAGGGAAGATGAGGCTAAAGAAGCTAAGAAAAAGGGAGGACATGTCGACAATAATGGTAGAAGAAGAAGATTACCACACAGGATTATCAGCCTCAGTTCCATTCCAATGGGAGTCAGAACCAGGAACTCCAAAGGCTAATTTGAATGATAGGAATAGTAGATCTCTTCTTTCTCCTCTCACTCCCCCACCTTCCTATTTCTCCAATCATCTTATCATCAACTCATCCCCTATGATCCATCTTTCTTCTAAGCCTTCTTTTAATAAGCCAAGTTTCCTCAACACTGTCTTCAGAAAGCTTTCTGTGAAGCCCAGTACTCTCCAGCCTCCCTCCCCTGCTTCTTCCTCCTCCTCAAGCTCTACCATGGAAAGACGGAGATATGCAAGTCCTAGAAGATTGTCGTTTGACTCGAGAGTGGACGACGACGACGACGACGAAAATGAAGACGGCAACTTAGAATCACCTGTTTCTACTTTGTTCTTTGGACGTCGAAGTGATAAAGGATGCTACCCAAAATTGGTCAAGGTATTCACTAGATATTCTAAATGA

Protein sequence

MNMGGRNSGELGSGKSGKMRLKKLRKREDMSTIMVEEEDYHTGLSASVPFQWESEPGTPKANLNDRNSRSLLSPLTPPPSYFSNHLIINSSPMIHLSSKPSFNKPSFLNTVFRKLSVKPSTLQPPSPASSSSSSSTMERRRYASPRRLSFDSRVDDDDDDENEDGNLESPVSTLFFGRRSDKGCYPKLVKVFTRYSK

Homology

[Close]

BLAST of CsaV3_1G036680 vs. NCBI nr
Match: XP_004145232.1 (PREDICTED: uncharacterized protein LOC101203250 [Cucumis sativus] >KGN65857.1 hypothetical protein Csa_1G533640 [Cucumis sativus])

HSP 1 Score: 299.7 bits (766), Expect = 7.5e-78
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MNMGGRNSGELGSGKSGKMRLKKLRKREDMSTIMVEEEDYHTGLSASVPFQWESEPGTPK 60
           MNMGGRNSGELGSGKSGKMRLKKLRKREDMSTIMVEEEDYHTGLSASVPFQWESEPGTPK
Sbjct: 1   MNMGGRNSGELGSGKSGKMRLKKLRKREDMSTIMVEEEDYHTGLSASVPFQWESEPGTPK 60

Query: 61  ANLNDRNSRSLLSPLTPPPSYFSNHLIINSSPMIHLSSKPSFNKPSFLNTVFRKLSVKPS 120
           ANLNDRNSRSLLSPLTPPPSYFSNHLIINSSPMIHLSSKPSFNKPSFLNTVFRKLSVKPS
Sbjct: 61  ANLNDRNSRSLLSPLTPPPSYFSNHLIINSSPMIHLSSKPSFNKPSFLNTVFRKLSVKPS 120

Query: 121 TLQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNLESPVSTLFFGRRS 180
           TLQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNLESPVSTLFFGRRS
Sbjct: 121 TLQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNLESPVSTLFFGRRS 180

Query: 181 DKGCYPKLVKVFTRYSK 198
           DKGCYPKLVKVFTRYSK
Sbjct: 181 DKGCYPKLVKVFTRYSK 197

[Close]

BLAST of CsaV3_1G036680 vs. NCBI nr
Match: XP_008457312.1 (PREDICTED: uncharacterized protein At4g00950 [Cucumis melo])

HSP 1 Score: 256.1 bits (653), Expect = 9.5e-65
Identity = 179/198 (90.40%), Postives = 187/198 (94.44%), Query Frame = 0


Query: 1   MNMGGRNSGELGSGKSGKMRLKKLRKREDMSTIMVEEEDYHTGLSASVPFQWESEPGTPK 60
           MNMGGRNSGELG GKSGKMRLKKLR R+DMS IMVEEEDYHTGLSASVPF+WESEPGTPK
Sbjct: 1   MNMGGRNSGELGGGKSGKMRLKKLRTRDDMSRIMVEEEDYHTGLSASVPFKWESEPGTPK 60

Query: 61  ANLNDRNSRSLLSPLTPPPSYFSNHLIINSSPMIHLSSKPSFNKPSFLNTVFRKLSVKPS 120
           ANL+D N+ SLLSPLTPPPSYFSNHLIINSSP+IHLSSKPSFNKPS LNTVFR LSVKP 
Sbjct: 61  ANLHDNNNGSLLSPLTPPPSYFSNHLIINSSPIIHLSSKPSFNKPSCLNTVFRMLSVKP- 120

Query: 121 TLQP-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNLESPVSTLFFGRR 180
           TLQP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGN+ESPVSTLFFGR 
Sbjct: 121 TLQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNVESPVSTLFFGRG 180

Query: 181 SDKGCYPKLVKVFTRYSK 198
           S+KGCYP LVKVFTR+SK
Sbjct: 181 SEKGCYPNLVKVFTRHSK 197

[Close]

BLAST of CsaV3_1G036680 vs. NCBI nr
Match: XP_023519368.1 (uncharacterized protein LOC111782803 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 143.7 bits (361), Expect = 6.9e-31
Identity = 97/178 (54.49%), Postives = 111/178 (62.36%), Query Frame = 0


Query: 20  RLKKLRKREDMSTIMVEEEDYHTGLSASVPFQWESEPGTPKANLNDRNSRSLLSPLTPPP 79
           +LKKLR R+DM    + EEDYHTG+SASVPFQWESEPGTPKAN  +    + LSPLTPPP
Sbjct: 3   KLKKLRTRDDM---WIVEEDYHTGVSASVPFQWESEPGTPKANFPENG--AFLSPLTPPP 62

Query: 80  SYFSNHLIINSSPMIHLSSKPSFNKPSFLNTVFRKLSVKPSTLQPXXXXXXXXXXXXXXX 139
           SYFS +    +SP+   SSKP F++ SFLN VFRKLS+K S           XXXXXXXX
Sbjct: 63  SYFSTN---PNSPLGLNSSKP-FHRASFLNNVFRKLSMKASLQPRSPGSLLSXXXXXXXX 122

Query: 140 XXXXXXXXXXXXXXXXXXXXXXXXXGNLESPVSTLFFGRRSDKGCYPKLVKVFTRYSK 198
                                     N+ESPVSTL FG  +DKGCYPKL KVFTR SK
Sbjct: 123 ERGTPGSPRRLSFDSRVDDDNGNEEENVESPVSTLSFGHGTDKGCYPKLAKVFTRDSK 171

[Close]

BLAST of CsaV3_1G036680 vs. NCBI nr
Match: XP_022970378.1 (uncharacterized protein LOC111469381 [Cucurbita maxima])

HSP 1 Score: 141.4 bits (355), Expect = 3.4e-30
Identity = 104/180 (57.78%), Postives = 120/180 (66.67%), Query Frame = 0


Query: 20  RLKKLRKREDMSTIMVEEEDYHTGLSASVPFQWESEPGTPKANLNDRNSRSLLSPLTPPP 79
           +LKK+R R+DM    + EEDYHTG+SASVPFQWESEPGTPKAN  +    + LSPLTPPP
Sbjct: 3   KLKKVRTRDDM---WIVEEDYHTGVSASVPFQWESEPGTPKANFPENG--AFLSPLTPPP 62

Query: 80  SYFSNHLIINSSPMIHLSSKPSFNKPSFLNTVFRKLSVKPSTLQP--XXXXXXXXXXXXX 139
           SYFS +    +SP+   SSKP F++ SFLN VFRKLS+K S LQP      XXXXXXXXX
Sbjct: 63  SYFSTN---PNSPLGLNSSKP-FHRASFLNNVFRKLSMKAS-LQPRSPGSLXXXXXXXXX 122

Query: 140 XXXXXXXXXXXXXXXXXXXXXXXXXXXGNLESPVSTLFFGRRSDKGCYPKLVKVFTRYSK 198
           XXXX                        N+ESPVSTL FG  +D+GCYPKLVKVFTR SK
Sbjct: 123 XXXXGTPGSPRRLSFDSRVDDDNGNEEENVESPVSTLSFGHGNDEGCYPKLVKVFTRDSK 172

[Close]

BLAST of CsaV3_1G036680 vs. NCBI nr
Match: XP_022964745.1 (uncharacterized protein LOC111464733 [Cucurbita moschata])

HSP 1 Score: 140.2 bits (352), Expect = 7.6e-30
Identity = 92/178 (51.69%), Postives = 108/178 (60.67%), Query Frame = 0


Query: 20  RLKKLRKREDMSTIMVEEEDYHTGLSASVPFQWESEPGTPKANLNDRNSRSLLSPLTPPP 79
           +LKK+R R+DM    + EEDYHTG+SASVPFQWESEPGTPKAN  +    + LSPLTPPP
Sbjct: 3   KLKKVRTRDDM---WIVEEDYHTGVSASVPFQWESEPGTPKANFPENG--AFLSPLTPPP 62

Query: 80  SYFSNHLIINSSPMIHLSSKPSFNKPSFLNTVFRKLSVKPSTLQPXXXXXXXXXXXXXXX 139
           SYFS     N +  + L+S  +F++ SFLN VFRKLS+K S           XXXXXXXX
Sbjct: 63  SYFST----NPNSPLGLNSSKTFHRASFLNNVFRKLSMKASLQPRSPGSLLSXXXXXXXX 122

Query: 140 XXXXXXXXXXXXXXXXXXXXXXXXXGNLESPVSTLFFGRRSDKGCYPKLVKVFTRYSK 198
                                     N+ESPVSTL FG  +DKGCYP LVKVF R SK
Sbjct: 123 ERGTPGSPRRLSFDSRVDDDNGNQEENVESPVSTLSFGHGNDKGCYPNLVKVFARDSK 171

[Close]

BLAST of CsaV3_1G036680 vs. TAIR10
Match: AT1G06930.1 (unknown protein)

HSP 1 Score: 55.1 bits (131), Expect = 5.8e-08
Identity = 38/93 (40.86%), Postives = 51/93 (54.84%), Query Frame = 0


Query: 37  EEDYHTGLSASVPFQWESEPGTPKANLNDRNSRS-----------LLSPLTPPPSYFSNH 96
           E DY+ G SA+VPF+WES+PGTP+  L+ R+S S           + +PLTPPPSYF   
Sbjct: 21  EGDYYGGSSAAVPFKWESQPGTPR-RLSKRSSSSGFNSDSDFNFPVSAPLTPPPSYF--- 80

Query: 97  LIINSSPMIHLSSKPSFNKPSFLNTVFRKLSVK 119
              + S   H+S K +       NT+F  L  K
Sbjct: 81  -YASPSSTKHVSPKKT-------NTLFSSLLSK 101

[Close]

BLAST of CsaV3_1G036680 vs. TAIR10
Match: AT3G56260.2 (unknown protein)

HSP 1 Score: 53.1 bits (126), Expect = 2.2e-07
Identity = 33/74 (44.59%), Postives = 42/74 (56.76%), Query Frame = 0


Query: 28  EDMSTIMVEEEDYHTGLSASVPFQWESEPGTPKANLNDRNSRSLLSPLTPPPSYFSNHLI 87
           ED   I  E   Y+ G  AS+PF WES PGTPK +L   +S  L  PLTPPPSY+S+ ++
Sbjct: 6   EDDFAIDEERSSYYGG--ASIPFIWESRPGTPKNHLCSDSSLPL--PLTPPPSYYSSGIL 65

Query: 88  INSSPMIHLSSKPS 102
                   + SK S
Sbjct: 66  STPRTQSKVRSKLS 75

[Close]

BLAST of CsaV3_1G036680 vs. TAIR10
Match: AT5G01790.1 (unknown protein)

HSP 1 Score: 50.4 bits (119), Expect = 1.4e-06
Identity = 23/44 (52.27%), Postives = 30/44 (68.18%), Query Frame = 0


Query: 40  YHTGLSASVPFQWESEPGTPKANLNDRNSRSLLSPLTPPPSYFS 84
           Y+ G + +VPF+WES PGTPK   +  +    L PLTPPPS+FS
Sbjct: 67  YYDGAAGAVPFEWESHPGTPK---HPSSELPTLPPLTPPPSHFS 107

[Close]

BLAST of CsaV3_1G036680 vs. TrEMBL
Match: tr|A0A0A0LYC9|A0A0A0LYC9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533640 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 4.9e-78
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MNMGGRNSGELGSGKSGKMRLKKLRKREDMSTIMVEEEDYHTGLSASVPFQWESEPGTPK 60
           MNMGGRNSGELGSGKSGKMRLKKLRKREDMSTIMVEEEDYHTGLSASVPFQWESEPGTPK
Sbjct: 1   MNMGGRNSGELGSGKSGKMRLKKLRKREDMSTIMVEEEDYHTGLSASVPFQWESEPGTPK 60

Query: 61  ANLNDRNSRSLLSPLTPPPSYFSNHLIINSSPMIHLSSKPSFNKPSFLNTVFRKLSVKPS 120
           ANLNDRNSRSLLSPLTPPPSYFSNHLIINSSPMIHLSSKPSFNKPSFLNTVFRKLSVKPS
Sbjct: 61  ANLNDRNSRSLLSPLTPPPSYFSNHLIINSSPMIHLSSKPSFNKPSFLNTVFRKLSVKPS 120

Query: 121 TLQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNLESPVSTLFFGRRS 180
           TLQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNLESPVSTLFFGRRS
Sbjct: 121 TLQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNLESPVSTLFFGRRS 180

Query: 181 DKGCYPKLVKVFTRYSK 198
           DKGCYPKLVKVFTRYSK
Sbjct: 181 DKGCYPKLVKVFTRYSK 197

[Close]

BLAST of CsaV3_1G036680 vs. TrEMBL
Match: tr|A0A1S3C5A7|A0A1S3C5A7_CUCME (uncharacterized protein At4g00950 OS=Cucumis melo OX=3656 GN=LOC103497034 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 6.3e-65
Identity = 179/198 (90.40%), Postives = 187/198 (94.44%), Query Frame = 0


Query: 1   MNMGGRNSGELGSGKSGKMRLKKLRKREDMSTIMVEEEDYHTGLSASVPFQWESEPGTPK 60
           MNMGGRNSGELG GKSGKMRLKKLR R+DMS IMVEEEDYHTGLSASVPF+WESEPGTPK
Sbjct: 1   MNMGGRNSGELGGGKSGKMRLKKLRTRDDMSRIMVEEEDYHTGLSASVPFKWESEPGTPK 60

Query: 61  ANLNDRNSRSLLSPLTPPPSYFSNHLIINSSPMIHLSSKPSFNKPSFLNTVFRKLSVKPS 120
           ANL+D N+ SLLSPLTPPPSYFSNHLIINSSP+IHLSSKPSFNKPS LNTVFR LSVKP 
Sbjct: 61  ANLHDNNNGSLLSPLTPPPSYFSNHLIINSSPIIHLSSKPSFNKPSCLNTVFRMLSVKP- 120

Query: 121 TLQP-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNLESPVSTLFFGRR 180
           TLQP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGN+ESPVSTLFFGR 
Sbjct: 121 TLQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNVESPVSTLFFGRG 180

Query: 181 SDKGCYPKLVKVFTRYSK 198
           S+KGCYP LVKVFTR+SK
Sbjct: 181 SEKGCYPNLVKVFTRHSK 197

[Close]

BLAST of CsaV3_1G036680 vs. TrEMBL
Match: tr|A0A1S3DYA3|A0A1S3DYA3_CICAR (LOW QUALITY PROTEIN: NADPH oxidase activator OS=Cicer arietinum OX=3827 GN=LOC101515497 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 4.9e-09
Identity = 38/84 (45.24%), Postives = 49/84 (58.33%), Query Frame = 0


Query: 35  VEEEDYHTGLSASVPFQWESEPGTPKANLNDRNSRSLLSPLTPPPSYFSNHLIINSSPMI 94
           +  EDYH   SAS+PF+WES+PGTPK     R+    L PLTPPPSYF      N++   
Sbjct: 38  ISNEDYHGNKSASIPFEWESQPGTPK----QRSKEKFLPPLTPPPSYFQ-----NATKKP 97

Query: 95  HLSSKPSFNKPSFLNTVFRKLSVK 119
              +K +  K SFL T+F K + K
Sbjct: 98  TTKTKKNSQKTSFLQTLFPKRTQK 112

[Close]

BLAST of CsaV3_1G036680 vs. TrEMBL
Match: tr|A0A2P5AZ77|A0A2P5AZ77_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_286260 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.4e-08
Identity = 44/109 (40.37%), Postives = 62/109 (56.88%), Query Frame = 0


Query: 7   NSGELGSGKSGKMRLKKLRKRE-DMSTIMVEEEDYHTGLSASVPFQWESEPGTPKANLND 66
           NS ++   K  K   K+L KR+  +S +   EE YH G S SVPF WES+PGTPK  L +
Sbjct: 12  NSLKITHSKDYKFFSKRLIKRDLSISNLSSTEEHYHGGSSVSVPFMWESQPGTPKVKLRE 71

Query: 67  RNSRSLLSPLTPPPSYFSNHLIINSSPMIHLSSKPSFNKPSFLNTVFRK 115
               + L PLTPPPSY  + +   SS     +++   +KP+ L+ +F K
Sbjct: 72  ----TPLPPLTPPPSYCYSPIATPSS-----TTRKKTSKPNLLHNIFSK 111

[Close]

BLAST of CsaV3_1G036680 vs. TrEMBL
Match: tr|A0A067E7D5|A0A067E7D5_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g044096mg PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 7.0e-08
Identity = 41/82 (50.00%), Postives = 49/82 (59.76%), Query Frame = 0


Query: 33  IMVEEEDYHTGLSASVPFQWESEPGTPKANLNDRNSRSLLSPLTPPPSYFSNHLIINSSP 92
           +++E+  YH G S SVPF+WESEPGTPK    D    S L PLTPPPSY  N    +S+P
Sbjct: 35  LLMEDYYYHEGASVSVPFRWESEPGTPKIRYRD----SPLPPLTPPPSYSYN----SSNP 94

Query: 93  MIHLSSKPSFNKPSFLNTVFRK 115
            I  + K    K S L TVF K
Sbjct: 95  PIGKNPK----KSSLLGTVFTK 104

The following BLAST results are available for this feature:

BLAST of CsaV3_1G036680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145232.1	7.5e-78	100.00	PREDICTED: uncharacterized protein LOC101203250 [Cucumis sativus] >KGN65857.1 hy...	[more]
XP_008457312.1	9.5e-65	90.40	PREDICTED: uncharacterized protein At4g00950 [Cucumis melo]	[more]
XP_023519368.1	6.9e-31	54.49	uncharacterized protein LOC111782803 [Cucurbita pepo subsp. pepo]	[more]
XP_022970378.1	3.4e-30	57.78	uncharacterized protein LOC111469381 [Cucurbita maxima]	[more]
XP_022964745.1	7.6e-30	51.69	uncharacterized protein LOC111464733 [Cucurbita moschata]	[more]

BLAST of CsaV3_1G036680 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G06930.1	5.8e-08	40.86	unknown protein	[more]
AT3G56260.2	2.2e-07	44.59	unknown protein	[more]
AT5G01790.1	1.4e-06	52.27	unknown protein	[more]

BLAST of CsaV3_1G036680 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_1G036680 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LYC9\|A0A0A0LYC9_CUCSA	4.9e-78	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533640 PE=4 SV=1	[more]
tr\|A0A1S3C5A7\|A0A1S3C5A7_CUCME	6.3e-65	90.40	uncharacterized protein At4g00950 OS=Cucumis melo OX=3656 GN=LOC103497034 PE=4 S...	[more]
tr\|A0A1S3DYA3\|A0A1S3DYA3_CICAR	4.9e-09	45.24	LOW QUALITY PROTEIN: NADPH oxidase activator OS=Cicer arietinum OX=3827 GN=LOC10...	[more]
tr\|A0A2P5AZ77\|A0A2P5AZ77_PARAD	2.4e-08	40.37	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_286260 PE...	[more]
tr\|A0A067E7D5\|A0A067E7D5_CITSI	7.0e-08	50.00	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g044096mg PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007789	DUF688

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G036680.1	CsaV3_1G036680.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007789	Protein of unknown function DUF688	PFAM	PF05097	DUF688	coord: 46..164 e-value: 3.3E-6 score: 26.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..139
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..172
None	No IPR available	PANTHER	PTHR33257:SF17	EXPRESSED PROTEIN	coord: 32..180
None	No IPR available	PANTHER	PTHR33257	FAMILY NOT NAMED	coord: 32..180

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G036680	CSPI01G24380	Wild cucumber (PI 183967)	cpicucB000
CsaV3_1G036680	CmaCh01G007220	Cucurbita maxima (Rimu)	cmacucB0522
CsaV3_1G036680	CmoCh13G000100	Cucurbita moschata (Rifu)	cmocucB0232
CsaV3_1G036680	Cp4.1LG02g11230	Cucurbita pepo (Zucchini)	cpecucB0662
CsaV3_1G036680	CsGy1G023860	Cucumber (Gy14) v2	cgybcucB001
CsaV3_1G036680	Carg26960	Silver-seed gourd	carcucB0362
CsaV3_1G036680	Carg07023	Silver-seed gourd	carcucB0553
CsaV3_1G036680	Cla008115	Watermelon (97103) v1	cucwmB026
CsaV3_1G036680	MELO3C020502	Melon (DHL92) v3.5.1	cucmeB025
CsaV3_1G036680	ClCG03G000230	Watermelon (Charleston Gray)	cucwcgB051
CsaV3_1G036680	MELO3C020502.2	Melon (DHL92) v3.6.1	cucmedB023
CsaV3_1G036680	Cla97C03G051040	Watermelon (97103) v2	cucwmbB042
CsaV3_1G036680	Bhi08G000364	Wax gourd	cucwgoB050

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G036680	Cucumber (Gy14) v1	cgycucB230
CsaV3_1G036680	Cucurbita maxima (Rimu)	cmacucB0245
CsaV3_1G036680	Cucurbita maxima (Rimu)	cmacucB0250
CsaV3_1G036680	Cucurbita maxima (Rimu)	cmacucB0512
CsaV3_1G036680	Cucurbita moschata (Rifu)	cmocucB0236
CsaV3_1G036680	Cucurbita moschata (Rifu)	cmocucB0500
CsaV3_1G036680	Cucurbita pepo (Zucchini)	cpecucB0625
CsaV3_1G036680	Bottle gourd (USVL1VR-Ls)	cuclsiB031