CsaV3_1G032600 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TGCTTGTTTGGGGTAAACCTCGAAAATGGTTTGTAATCTATAGTCGTTTGCTCCCATTGACAAAATTTCTGCATTCATCCCTACAAAACGAAAGCTTAATTTCCCACACCTTCCTATCATTATTATCCAATTCAATACTAACAAAATCATCTAATTTTCTAATCCTTTCTTCCTTTTAATCATATTTCTCTCTACCCCACTTCCAAACATGGCCTTTTTGGGCGGCAAGAACCAAAGGGAAGATGGCTCGCTCATGTCATCCCTTCATCATTTCCCATTCACCTTTCTTCTTAAACCCTTTACAATGGCGAAATATTTCTCAATATATAACCACTGTGATTCCAAGCTCACTGGTTTTCAAGCCATTCCACTTCAAATTTTCTTCCCCACTTTTAATCCACATTTTCGCTGCTCAAATTCATTACACCCCTTATCTTCACAAATCCCACTTTAGGGGAGATTGAGAAAAAGGGTTTTCTGAAAAGAGTTTGTGTTTGATTTTTCATTTGGGTTTTTGTTTTTGATGTGCAACTAGTTATTGGAGAATGAGAAACTTTTATGAGATGGAGCTCATTGCTATGAGCGTTTGTAATGCTTTTCTTCTGCCATTAGTTCAAGGCTCAGCTCCTGGAGAGTTGCAGAAAGCTAGGAGTCAGAGGAGTATTGAAGACAGCCATGAAAAGGTAAAGTTTGAGCTAATTTTCTTGTTTAAAATATTGACATGAGATTAAATTTATTTTAGCCCACTTTATTTTCTGTTGAATTTTTATGTAAGATTAAATTTACAGTAACCTTTTCACCTGACTGAGTTTATGGGTGATTTAACATGATATTAGGTTAGGGAATTCTCTGTTTGATTCCTGTAAAGTCATTTTTTTCTCTTATTAGCCACTTGTTGGTTCTTGTGCAAATTTTGGAGGGCCCCTAGTGAAAGAGAGTGTTGTAGTGTTGATACAAGATTCAATTTATTCTAGCCTTCTATTTCTCTTGTTGAGTTTTTATATAAGATTAAATTTACGGTAACCTTTTCACCTCAGTGTTTGAGTTTGGTGGTGATTTAACATATTAGGCTTGGAAATCGATCCCCTGTTTGGTTCTTTTGCTAATTTAGAGTCCACCAGTGAAAGAGAGTTCATAGTGGTGATCTAAGATTAAATTTATTCTAGCCAACTATTTTCCTTCTTAAATTGTTGATATAAGATCAAATTTAAAGTAACTTTTCACATGGTTTTTATAGTTTGATCCTAGTCATTTTTTTCTCTAATTAATCACTTGTTGATTTTGTGTAAATTTGGATCCCACATGCGAATGAGAATGTTAAAATATTTATATAAAATTAAATTCGCTGTAATTTGACGATGATTTTGGAAGTTTTGCAGTTAAGCCATCAAAAGAGACTTGATATTCAACTCCATGGACTGCTCCTCTGGATTTCAATGGGGTTCCTAATGCCTGTTGGGATACTCACAATTAGAATGTCTGGTAGGATGGCTCGTGGGTCGACTCTGTTAAAGGTCTTCTTCTACCTCCATGTTGTTTTGCAGGTAAAGCAACTCCCTTCTTCATTCTTCATTCTTTATTTCTTCTACTAATTTTTTTAAATATCTTGTAACTCAGAGAAAGATGATGTTTTCTTTCGAGATCATAAAAATGCTTAAAAGGCAACCATTTTTTGTTTTAAATTTGATAGAACATAATCATGCCCAGCATGTTGTATCATCATGATTTCTTTGTTTTTATTCTGGAATTTTCTTTAGTTTTGCTGATTACAATTTAGTGGCAGAGAAGTTACAGAATTCATACTTGAATAGCAAGAAAAGGATTATAATTAGTAGTACTCCTCATGATCCTTCTCATTGTCTCCAATGAGCACAAACTGTTTCTCTCTCTCTTTCTAAGAGTAAATTATGAATGTTAGTCTTGTAAGATATTATCTCTAGCTTGTCAACATTGTTAATTAGTATTGATTGGCTAGTTAATTATACTGTAAAACAAATGGTTTTTTAAAGCATACGGATTTGTGATATTTGCATGAGCATTAAAGTATAAGGATACAAAAGGGATTTGCACTTATCCTCTTGACTTTGTTCTTTTGGAGTACTTTATAGGCCTAATTCTGTTTGGCTCCTTTCTTTTCTTTTTTTTGTATGCACTTTTTTTTTTCTCAATGACAGCTGAATTTTTAAATTAAATATATATATATATAGTGATTCTGAACTTGATATTCTTTGAAGGATATTGACTTAATTTCATTTAACAGACACTATCCCTCCTCTTGGCCACAGCTGGAGCTGTAATGTCCATCAGAAATTTTGAGAACTTATTTAATAATAACCATCAAAGAATAGGTTTAGCTCTTTACTTAGCCATATGGGCACAGGCAGTGATAGGCATTTTCAGGCCTCAAAGGTAAATTTCATCTGCTTTTCCCACTTTACCCTTTTTCATTTTTAGGACCTTTCTTGACTTGTGAAACTTTGTAGGACCAAAACATGATTATTGCTCCACTAAATGACCCCATTAAAATATGCAAAATAAGAGTTTGTCTTAACTTCTATCGGTAATCAAAAGCACTTTAAAATTTTACTTTGGCATCTAATTACGTAGCCAAAAATGTTTCAACTTTTTTTAAGAAAAATACATAACATACTCTTAGAAATTTCCCTTGGTTAATGCTTATTCATCCGCCTTTTAGAGAGAGATCATTTTTCTGTGGTTTTCTAGGGCGTGTGTTGTGTTGTATCCTATTTGGAGGGAGAGGAACAATAAAGTGTTGAGGTAGGTATGTAGATCCCTATAAGGTTTGGTCTTTAGTGAGATTTTATAGGTCACTTTGGGCTTCAATATCAAAACAAATTTGTAGCTATTCTCTTGGTAACATCTTACATAGTTGGAATCTCTTTCTTTAGAAGGGGTGTTTTGGTGGACTTGTTTTTTTTGTATGCCTCTTTCCTTTTTTTCTCTCGTTGATTCTATTTTAAAAAACAGTTATTCAAAAAGTACTTACAAAATGAGACTACTCAAAAACAGTATCCTCAAAATTCATTACAAACTCAGTCTCTGAACCTTCTGTGGAAATGTTTCCTTTTAATAACTGAGTTGAAGCTTTTCTGAGAAACCATCACCACTCACTTGACTTGTGCAGGGGAAAGAAAGAAAGAAATGCATGGTTTCTTATGCATTGGATTCTTGGAACAATAATTTCTATAGTGGGAATCATCAATATCTATACTGGCTTAAATGCCTACCATAAGAAAACTTCAAGAAGCATTGGATTATGGACTGTACTCTTCACTGCAGAGATCTCCTTCATCGGTTTCTTTTATTTGTTTCAAGATAAATGGGAGTTTTTGCAGAAGCAAGGGGTTGTTTTAGGGGAATCTGAAGCAGTTTCTCATTCTGATGAACAAGTAGAGACTCGAAGGCAAAACTCCAAGGAATTGTTACCTAATCCTTGTACCAAACAAAATGCACTCAGAAACTTGTTTGATTAAAATGGGTTTTTTTCCTCCCCATTTTTCTTACAAGCTTAGCTACTACGTTTACTATCTGACTGAAATTTCTACTCTATTTTTGATGCATGCACTTTGTGCAAGTGAACTGTGATCCTCTGGGGAGGGTTATGCTGAGTGCATGCATCAAAAAGAGTATCTTCCATTTGCTCAAATTTACATCAATTTCTTAATCCAAAGTTAAATTCCTAGTGGTTGAAGTTTTTGCCCCAAGAGATTTTATTTTGATTGATGGTTGAGTGTTAAAGAGTATATATGTAAAACCTTACTAGTTTAAAGCGTGTGGATTTGGTAGTTGTTTAACATTGTGTTAGGTGAGAAGATCTTGTTATAAATTGTAATCTTTCTTTAATTCTATGCGATGATGTGCTTTTGAGTATCCTCCCTTCTCTCTGAGTGGAAAAGGCAGTCGTTTAGAGGATGGTGTTACTCAGTTTATAACTTCAACTAGGGTTTTTGAAGTGAAAAGGGGTTGGGAATTCAGTTTTGAACTTTAAAGATGTGCTAGAGAAAGTCTATTTTTCTTCCAAAGAAGAATCTTTTAACTGCACAACGTCTAATTGACATGTATCTCTCTATTTGAGATTAGAGGTTCAAATATTCATCCTCCTACTTATAAAAGGAAATGTTTTGCTTTTCAAATGTTGCAATAATTTAAAC ATGAGAAACTTTTATGAGATGGAGCTCATTGCTATGAGCGTTTGTAATGCTTTTCTTCTGCCATTAGTTCAAGGCTCAGCTCCTGGAGAGTTGCAGAAAGCTAGGAGTCAGAGGAGTATTGAAGACAGCCATGAAAAGTTAAGCCATCAAAAGAGACTTGATATTCAACTCCATGGACTGCTCCTCTGGATTTCAATGGGGTTCCTAATGCCTGTTGGGATACTCACAATTAGAATGTCTGGTAGGATGGCTCGTGGGTCGACTCTGTTAAAGGTCTTCTTCTACCTCCATGTTGTTTTGCAGACACTATCCCTCCTCTTGGCCACAGCTGGAGCTGTAATGTCCATCAGAAATTTTGAGAACTTATTTAATAATAACCATCAAAGAATAGGTTTAGCTCTTTACTTAGCCATATGGGCACAGGCAGTGATAGGCATTTTCAGGCCTCAAAGGGGAAAGAAAGAAAGAAATGCATGGTTTCTTATGCATTGGATTCTTGGAACAATAATTTCTATAGTGGGAATCATCAATATCTATACTGGCTTAAATGCCTACCATAAGAAAACTTCAAGAAGCATTGGATTATGGACTGTACTCTTCACTGCAGAGATCTCCTTCATCGGTTTCTTTTATTTGTTTCAAGATAAATGGGAGTTTTTGCAGAAGCAAGGGGTTGTTTTAGGGGAATCTGAAGCAGTTTCTCATTCTGATGAACAAGTAGAGACTCGAAGGCAAAACTCCAAGGAATTGTTACCTAATCCTTGTACCAAACAAAATGCACTCAGAAACTTGTTTGATTAA ATGAGAAACTTTTATGAGATGGAGCTCATTGCTATGAGCGTTTGTAATGCTTTTCTTCTGCCATTAGTTCAAGGCTCAGCTCCTGGAGAGTTGCAGAAAGCTAGGAGTCAGAGGAGTATTGAAGACAGCCATGAAAAGTTAAGCCATCAAAAGAGACTTGATATTCAACTCCATGGACTGCTCCTCTGGATTTCAATGGGGTTCCTAATGCCTGTTGGGATACTCACAATTAGAATGTCTGGTAGGATGGCTCGTGGGTCGACTCTGTTAAAGGTCTTCTTCTACCTCCATGTTGTTTTGCAGACACTATCCCTCCTCTTGGCCACAGCTGGAGCTGTAATGTCCATCAGAAATTTTGAGAACTTATTTAATAATAACCATCAAAGAATAGGTTTAGCTCTTTACTTAGCCATATGGGCACAGGCAGTGATAGGCATTTTCAGGCCTCAAAGGGGAAAGAAAGAAAGAAATGCATGGTTTCTTATGCATTGGATTCTTGGAACAATAATTTCTATAGTGGGAATCATCAATATCTATACTGGCTTAAATGCCTACCATAAGAAAACTTCAAGAAGCATTGGATTATGGACTGTACTCTTCACTGCAGAGATCTCCTTCATCGGTTTCTTTTATTTGTTTCAAGATAAATGGGAGTTTTTGCAGAAGCAAGGGGTTGTTTTAGGGGAATCTGAAGCAGTTTCTCATTCTGATGAACAAGTAGAGACTCGAAGGCAAAACTCCAAGGAATTGTTACCTAATCCTTGTACCAAACAAAATGCACTCAGAAACTTGTTTGATTAA MRNFYEMELIAMSVCNAFLLPLVQGSAPGELQKARSQRSIEDSHEKLSHQKRLDIQLHGLLLWISMGFLMPVGILTIRMSGRMARGSTLLKVFFYLHVVLQTLSLLLATAGAVMSIRNFENLFNNNHQRIGLALYLAIWAQAVIGIFRPQRGKKERNAWFLMHWILGTIISIVGIINIYTGLNAYHKKTSRSIGLWTVLFTAEISFIGFFYLFQDKWEFLQKQGVVLGESEAVSHSDEQVETRRQNSKELLPNPCTKQNALRNLFD
BLAST of CsaV3_1G032600 vs. NCBI nr
Match: XP_004147435.1 (PREDICTED: cytochrome b561 domain-containing protein At4g18260 [Cucumis sativus] >KGN65559.1 hypothetical protein Csa_1G447420 [Cucumis sativus]) HSP 1 Score: 527.3 bits (1357), Expect = 3.0e-146 Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0
BLAST of CsaV3_1G032600 vs. NCBI nr
Match: XP_008444083.1 (PREDICTED: cytochrome b561 domain-containing protein At4g18260-like [Cucumis melo]) HSP 1 Score: 514.6 bits (1324), Expect = 2.0e-142 Identity = 260/266 (97.74%), Postives = 262/266 (98.50%), Query Frame = 0
BLAST of CsaV3_1G032600 vs. NCBI nr
Match: XP_022927404.1 (cytochrome b561 domain-containing protein At4g18260 [Cucurbita moschata]) HSP 1 Score: 456.4 bits (1173), Expect = 6.4e-125 Identity = 227/267 (85.02%), Postives = 247/267 (92.51%), Query Frame = 0
BLAST of CsaV3_1G032600 vs. NCBI nr
Match: XP_023519995.1 (cytochrome b561 domain-containing protein At4g18260 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 454.9 bits (1169), Expect = 1.9e-124 Identity = 226/267 (84.64%), Postives = 246/267 (92.13%), Query Frame = 0
BLAST of CsaV3_1G032600 vs. NCBI nr
Match: XP_022139886.1 (cytochrome b561 domain-containing protein At4g18260 [Momordica charantia]) HSP 1 Score: 453.0 bits (1164), Expect = 7.1e-124 Identity = 226/269 (84.01%), Postives = 245/269 (91.08%), Query Frame = 0
BLAST of CsaV3_1G032600 vs. TAIR10
Match: AT4G18260.1 (Cytochrome b561/ferric reductase transmembrane protein family) HSP 1 Score: 256.9 bits (655), Expect = 1.4e-68 Identity = 135/268 (50.37%), Postives = 181/268 (67.54%), Query Frame = 0
BLAST of CsaV3_1G032600 vs. TAIR10
Match: AT2G30890.1 (Cytochrome b561/ferric reductase transmembrane protein family) HSP 1 Score: 205.7 bits (522), Expect = 3.6e-53 Identity = 95/192 (49.48%), Postives = 138/192 (71.88%), Query Frame = 0
BLAST of CsaV3_1G032600 vs. TAIR10
Match: AT2G04850.1 (Auxin-responsive family protein) HSP 1 Score: 67.4 bits (163), Expect = 1.5e-11 Identity = 39/136 (28.68%), Postives = 66/136 (48.53%), Query Frame = 0
BLAST of CsaV3_1G032600 vs. TAIR10
Match: AT4G17280.1 (Auxin-responsive family protein) HSP 1 Score: 66.2 bits (160), Expect = 3.4e-11 Identity = 38/135 (28.15%), Postives = 68/135 (50.37%), Query Frame = 0
BLAST of CsaV3_1G032600 vs. TAIR10
Match: AT4G12980.1 (Auxin-responsive family protein) HSP 1 Score: 63.9 bits (154), Expect = 1.7e-10 Identity = 40/135 (29.63%), Postives = 67/135 (49.63%), Query Frame = 0
BLAST of CsaV3_1G032600 vs. Swiss-Prot
Match: sp|Q0WPS2|B561M_ARATH (Cytochrome b561 domain-containing protein At4g18260 OS=Arabidopsis thaliana OX=3702 GN=At4g18260 PE=2 SV=1) HSP 1 Score: 261.9 bits (668), Expect = 7.6e-69 Identity = 138/272 (50.74%), Postives = 184/272 (67.65%), Query Frame = 0
BLAST of CsaV3_1G032600 vs. Swiss-Prot
Match: sp|O80854|B561L_ARATH (Cytochrome b561 domain-containing protein At2g30890 OS=Arabidopsis thaliana OX=3702 GN=At2g30890 PE=2 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 6.5e-52 Identity = 95/192 (49.48%), Postives = 138/192 (71.88%), Query Frame = 0
BLAST of CsaV3_1G032600 vs. Swiss-Prot
Match: sp|Q9SJ74|B561G_ARATH (Cytochrome b561 and DOMON domain-containing protein At2g04850 OS=Arabidopsis thaliana OX=3702 GN=At2g04850 PE=2 SV=2) HSP 1 Score: 67.4 bits (163), Expect = 2.8e-10 Identity = 39/136 (28.68%), Postives = 66/136 (48.53%), Query Frame = 0
BLAST of CsaV3_1G032600 vs. Swiss-Prot
Match: sp|Q8VYH6|B651B_ARATH (Cytochrome b561 and DOMON domain-containing protein At4g17280 OS=Arabidopsis thaliana OX=3702 GN=At4g17280 PE=2 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 6.1e-10 Identity = 38/135 (28.15%), Postives = 68/135 (50.37%), Query Frame = 0
BLAST of CsaV3_1G032600 vs. Swiss-Prot
Match: sp|Q9SV71|B561O_ARATH (Cytochrome b561 and DOMON domain-containing protein At4g12980 OS=Arabidopsis thaliana OX=3702 GN=At4g12980 PE=2 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 3.0e-09 Identity = 40/135 (29.63%), Postives = 67/135 (49.63%), Query Frame = 0
BLAST of CsaV3_1G032600 vs. TrEMBL
Match: tr|A0A0A0LX28|A0A0A0LX28_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G447420 PE=4 SV=1) HSP 1 Score: 527.3 bits (1357), Expect = 2.0e-146 Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0
BLAST of CsaV3_1G032600 vs. TrEMBL
Match: tr|A0A1S3B9I4|A0A1S3B9I4_CUCME (cytochrome b561 domain-containing protein At4g18260-like OS=Cucumis melo OX=3656 GN=LOC103487525 PE=4 SV=1) HSP 1 Score: 514.6 bits (1324), Expect = 1.3e-142 Identity = 260/266 (97.74%), Postives = 262/266 (98.50%), Query Frame = 0
BLAST of CsaV3_1G032600 vs. TrEMBL
Match: tr|A0A251PHB3|A0A251PHB3_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G079100 PE=4 SV=1) HSP 1 Score: 325.5 bits (833), Expect = 1.1e-85 Identity = 167/267 (62.55%), Postives = 203/267 (76.03%), Query Frame = 0
BLAST of CsaV3_1G032600 vs. TrEMBL
Match: tr|A0A061GEA2|A0A061GEA2_THECC (Cytochrome B561-related protein, putative OS=Theobroma cacao OX=3641 GN=TCM_029506 PE=4 SV=1) HSP 1 Score: 313.9 bits (803), Expect = 3.4e-82 Identity = 156/251 (62.15%), Postives = 195/251 (77.69%), Query Frame = 0
BLAST of CsaV3_1G032600 vs. TrEMBL
Match: tr|A0A2P6Q5G9|A0A2P6Q5G9_ROSCH (Putative cytochrome b561/ferric reductase transmembrane OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0013761 PE=4 SV=1) HSP 1 Score: 313.5 bits (802), Expect = 4.5e-82 Identity = 159/253 (62.85%), Postives = 196/253 (77.47%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |