Carg19927 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AATGAGAAACTTCCATAACCTGGAGCTCGTCACCATGAGCTTATGCAATGCTTTTCTTCTGCCATTAGTTCAAGGCTCAGCTCATGAAGGGTTGAAGAAAGCTAGGAGTCAGAGGAGTATAGAAGACGGCCATGAAAAGGCAAACGATAAGCTAATTTTCTCGTTAGAATCATTGATATACGTTTCAATTTGTTCTTGCCAACTATTTTTCTTGTTGATTTATTGATGCAAGATTACGTTTAAGAGTAGGAGATTCTTTAAAGTATTGAAATATGTTTAAATTTTCGCAGCTAAGCCATGAAAAGAGATCTGATATTCAACTCCATGGATTGCTCCTCTGGATTTCAATGGGGTTCTTAATGCCTGTTGGTATACTTACAATTAGAATGTCTGGTCGGCTAGCTCGTGGGTCGACTCAATTAAAGGTCTTCTTCTACCTCCATGTCATTTTGCAGGTAACCCAGTTCTTCATTCTTCATTCTTTCTATCAATTTTGTCAATATCTTGTAACTTAGATATCATAAAATGCTTAAGAGGCAACCATTTTTGTTCTTGAATTTGGCAAGAACATAATCATATCCAACATGTTGTATCATCATGGTTTCCCCACTTTGTTTGTTCTGCTGATTACAATTTAGTGGCAGAGAAGTTAAAGAATTCATACTTGAATGGCAAGAAAAAGATTATAATTAGTGATTCTCATGATGAATCTCAGTGTCTCCAATAAGGATAAGCTCTGTTTCTCTCTCTCTCTCTTTCTTTCCAAGAGTAAATTATGAAAGTTACTCTTTTACTAACTTAATTTCATTCAACAGACACTATCCCTTCTCCTGGCCTCAGCTGGAGCTGTAATGTCCCTCAGAAAATTTGAGAACTTATTTAATAACAGCCATCAAAGAATAGGCTTAGCCCTTTACGTAGCCATATGGGCACAGGCAGTGATAGGCACTTTCAGGCCTCAAAGGTAAATGTCCTCCACCCTTCCCATTTACCCTTCACTTTTAGGACCTTTCTTGATCAATGAACTTTTGTAGGGCCAAAACATGATTGTTCTAGCAAGAGTTTATCATAACTTCCCTAAGAACTTTTAAAATTTATTTTGGTGCTTAATCACCCTGTTCGGTTATGGAGCTTGTTGTTTATTTATATTATAGGGAAAATGGTCATCTAAACGAGTAGTAAAAAGCTGCTAGAGATATATACGGTAGAAAGGTGTTAGAGATATATACGATAGATACAGTAGATGGTTCTATCTAGTCAAGCTATATATATAGTAAACTGAACTATAAATAACCATTTAGGCAATGCTTTGAAAACGTACTTTATGCATTCTCTCGTACCTTTAGCTAATATTCCTCCGTGCATTTTCTACCTCTGTTCTGTGTTCATCTCAATCATCAATATAAACTTTTAGCCAATTCTCTCTTTTATTCTTTGTGTTGATCTAGATCGAGTGTGTGCGTTATTGTGCGATCCTAACACCCAGCACTTCACGTGTGTACAGGGGAAAGAAAGAAAGAAGTGTGTGGTTTCTTATGCATTGGATTCTTGGAACAATAGTTTGTCTAGTGGGAATTATCAATATCTACACTGGGTTGAATGCGTACCATAAGAAAACTTCAAGAAGCATTGGATTATGGACTGTTCTCTTCACTGCAGAGATCTGTTTCATTGGTTTCTTTTATTTGTTTCAAGATAAATGGGAGTTTTTGCAGAAGCAAGGGGTTATTTTAGAGGATTCTGAAGGAGTTTCAGCTCCTGATGAACAACAGGTAGAAGCTCAAAGGCAAAACCCCAAGGATTTGTTGCCTGATCCTTGTACCAAACAAAATGCACTCAGAAACTTGTTTGATTAAAATGACTAGCTTCTATGTTTACATGTTTATCTGACTCAAATCTCCACTTATACTGATGAGTGCATGCATCAAATTGCATCAAATTTCTTGATTCAAACTAATTCTTAGTGCTTAAAGTTTAGCCCCAAAAGATGTCGTGGCTTTGTTAGTGGTTTAATATTGTATTAGGGGAGAAGATCTTTGGTATAATCTTTCTTGAATTGTTTGTGATGGTCTGCTTTTGAGTATCATTTTTCTTCCTTTTTCTTAGTGGAAAAGGCCTTCATTTAGGGGATGGGGTACCCAATTTGATCTATAAAGCTTTG AATGAGAAACTTCCATAACCTGGAGCTCGTCACCATGAGCTTATGCAATGCTTTTCTTCTGCCATTAGTTCAAGGCTCAGCTCATGAAGGGTTGAAGAAAGCTAGGAGTCAGAGGAGTATAGAAGACGGCCATGAAAAGGCAAACGATAAGCTAATTTTCTCGTTAGAATCATTGATATACCTAAGCCATGAAAAGAGATCTGATATTCAACTCCATGGATTGCTCCTCTGGATTTCAATGGGGTTCTTAATGCCTGTTGGTATACTTACAATTAGAATGTCTGGTCGGCTAGCTCGTGGGTCGACTCAATTAAAGGTCTTCTTCTACCTCCATGTCATTTTGCAGACACTATCCCTTCTCCTGGCCTCAGCTGGAGCTGTAATGTCCCTCAGAAAATTTGAGAACTTATTTAATAACAGCCATCAAAGAATAGGCTTAGCCCTTTACGTAGCCATATGGGCACAGGCAGTGATAGGCACTTTCAGGCCTCAAAGAAGCATTGGATTATGGACTGTTCTCTTCACTGCAGAGATCTGTTTCATTGGTTTCTTTTATTTGTTTCAAGATAAATGGGAGTTTTTGCAGAAGCAAGGGGTTATTTTAGAGGATTCTGAAGGAGTTTCAGCTCCTGATGAACAACAGGTAGAAGCTCAAAGGCAAAACCCCAAGGATTTGTTGCCTGATCCTTGTACCAAACAAAATGCACTCAGAAACTTTGGAAAAGGCCTTCATTTAGGGGATGGGGTACCCAATTTGATCTATAAAGCTTTG ATGAGAAACTTCCATAACCTGGAGCTCGTCACCATGAGCTTATGCAATGCTTTTCTTCTGCCATTAGTTCAAGGCTCAGCTCATGAAGGGTTGAAGAAAGCTAGGAGTCAGAGGAGTATAGAAGACGGCCATGAAAAGGCAAACGATAAGCTAATTTTCTCGTTAGAATCATTGATATACCTAAGCCATGAAAAGAGATCTGATATTCAACTCCATGGATTGCTCCTCTGGATTTCAATGGGGTTCTTAATGCCTGTTGGTATACTTACAATTAGAATGTCTGGTCGGCTAGCTCGTGGGTCGACTCAATTAAAGGTCTTCTTCTACCTCCATGTCATTTTGCAGACACTATCCCTTCTCCTGGCCTCAGCTGGAGCTGTAATGTCCCTCAGAAAATTTGAGAACTTATTTAATAACAGCCATCAAAGAATAGGCTTAGCCCTTTACGTAGCCATATGGGCACAGGCAGTGATAGGCACTTTCAGGCCTCAAAGAAGCATTGGATTATGGACTGTTCTCTTCACTGCAGAGATCTGTTTCATTGGTTTCTTTTATTTGTTTCAAGATAAATGGGAGTTTTTGCAGAAGCAAGGGGTTATTTTAGAGGATTCTGAAGGAGTTTCAGCTCCTGATGAACAACAGGTAGAAGCTCAAAGGCAAAACCCCAAGGATTTGTTGCCTGATCCTTGTACCAAACAAAATGCACTCAGAAACTTTGGAAAAGGCCTTCATTTAGGGGATGGGGTACCCAATTTGATCTATAAAGCTTTG MRNFHNLELVTMSLCNAFLLPLVQGSAHEGLKKARSQRSIEDGHEKANDKLIFSLESLIYLSHEKRSDIQLHGLLLWISMGFLMPVGILTIRMSGRLARGSTQLKVFFYLHVILQTLSLLLASAGAVMSLRKFENLFNNSHQRIGLALYVAIWAQAVIGTFRPQRSIGLWTVLFTAEICFIGFFYLFQDKWEFLQKQGVILEDSEGVSAPDEQQVEAQRQNPKDLLPDPCTKQNALRNFGKGLHLGDGVPNLIYKAL
BLAST of Carg19927 vs. NCBI nr
Match: XP_022927404.1 (cytochrome b561 domain-containing protein At4g18260 [Cucurbita moschata]) HSP 1 Score: 414.8 bits (1065), Expect = 2.1e-112 Identity = 224/278 (80.58%), Postives = 224/278 (80.58%), Query Frame = 0
BLAST of Carg19927 vs. NCBI nr
Match: XP_023519995.1 (cytochrome b561 domain-containing protein At4g18260 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 411.0 bits (1055), Expect = 3.0e-111 Identity = 222/278 (79.86%), Postives = 222/278 (79.86%), Query Frame = 0
BLAST of Carg19927 vs. NCBI nr
Match: XP_023001457.1 (cytochrome b561 domain-containing protein At4g18260 [Cucurbita maxima]) HSP 1 Score: 406.4 bits (1043), Expect = 7.4e-110 Identity = 218/278 (78.42%), Postives = 221/278 (79.50%), Query Frame = 0
BLAST of Carg19927 vs. NCBI nr
Match: XP_008444083.1 (PREDICTED: cytochrome b561 domain-containing protein At4g18260-like [Cucumis melo]) HSP 1 Score: 353.2 bits (905), Expect = 7.4e-94 Identity = 192/278 (69.06%), Postives = 207/278 (74.46%), Query Frame = 0
BLAST of Carg19927 vs. NCBI nr
Match: XP_022139886.1 (cytochrome b561 domain-containing protein At4g18260 [Momordica charantia]) HSP 1 Score: 348.2 bits (892), Expect = 2.4e-92 Identity = 190/280 (67.86%), Postives = 203/280 (72.50%), Query Frame = 0
BLAST of Carg19927 vs. TAIR10
Match: AT4G18260.1 (Cytochrome b561/ferric reductase transmembrane protein family) HSP 1 Score: 172.2 bits (435), Expect = 4.2e-43 Identity = 98/244 (40.16%), Postives = 136/244 (55.74%), Query Frame = 0
BLAST of Carg19927 vs. TAIR10
Match: AT2G30890.1 (Cytochrome b561/ferric reductase transmembrane protein family) HSP 1 Score: 118.2 bits (295), Expect = 7.3e-27 Identity = 66/193 (34.20%), Postives = 98/193 (50.78%), Query Frame = 0
BLAST of Carg19927 vs. Swiss-Prot
Match: sp|Q0WPS2|B561M_ARATH (Cytochrome b561 domain-containing protein At4g18260 OS=Arabidopsis thaliana OX=3702 GN=At4g18260 PE=2 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 1.5e-42 Identity = 100/249 (40.16%), Postives = 138/249 (55.42%), Query Frame = 0
BLAST of Carg19927 vs. Swiss-Prot
Match: sp|O80854|B561L_ARATH (Cytochrome b561 domain-containing protein At2g30890 OS=Arabidopsis thaliana OX=3702 GN=At2g30890 PE=2 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.3e-25 Identity = 66/193 (34.20%), Postives = 98/193 (50.78%), Query Frame = 0
BLAST of Carg19927 vs. TrEMBL
Match: tr|A0A1S3B9I4|A0A1S3B9I4_CUCME (cytochrome b561 domain-containing protein At4g18260-like OS=Cucumis melo OX=3656 GN=LOC103487525 PE=4 SV=1) HSP 1 Score: 353.2 bits (905), Expect = 4.9e-94 Identity = 192/278 (69.06%), Postives = 207/278 (74.46%), Query Frame = 0
BLAST of Carg19927 vs. TrEMBL
Match: tr|A0A0A0LX28|A0A0A0LX28_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G447420 PE=4 SV=1) HSP 1 Score: 344.7 bits (883), Expect = 1.7e-91 Identity = 189/278 (67.99%), Postives = 206/278 (74.10%), Query Frame = 0
BLAST of Carg19927 vs. TrEMBL
Match: tr|A0A251PHB3|A0A251PHB3_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G079100 PE=4 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 3.5e-52 Identity = 131/279 (46.95%), Postives = 161/279 (57.71%), Query Frame = 0
BLAST of Carg19927 vs. TrEMBL
Match: tr|A0A061GEA2|A0A061GEA2_THECC (Cytochrome B561-related protein, putative OS=Theobroma cacao OX=3641 GN=TCM_029506 PE=4 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 1.5e-50 Identity = 122/279 (43.73%), Postives = 161/279 (57.71%), Query Frame = 0
BLAST of Carg19927 vs. TrEMBL
Match: tr|A0A2P5A7Z4|A0A2P5A7Z4_PARAD (Cytochrome b561 and DOMON domain-containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_359470 PE=4 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 5.7e-50 Identity = 118/223 (52.91%), Postives = 141/223 (63.23%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |