CsaV3_1G030790 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G030790
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Protein of unknown function, DUF538
Location	chr1 : 17769583 .. 17772963 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCAGATAACTATAAACAAAAATCATCACAACACAAACAACGTATCTCATACTGAAATTGATTTCCAAAATCTGAAACCAGACAACAACATTTGATTTTGATTCAGAGCTTGAAGAAGCTCACACCATGAAATCTATCTTCCTTCTCTTTCTCTTCTCAGCCCTCCTTTCCCTTTCCACTCAATCCATTGACTCCAAAAACCTAAACATTCCACCTTCCTCTGCTCATGCTCGCCTCGCCGATTACGGATTCCCCTTCGGCCTTCTCCCCTCCGCCGTCTCCTCCTACACCATTAACGATACCTCTGGTGACTTCTCTTTGGACCTCGGTGATTCCTGCAAGTTCACACTTCCTCCAGACAACTACGTGGCTTCCTTTTCTAGGGTTGTCACTGGTAAGATTGCCAAGGGTCGGATCCACAATCTTGATGGCATTCGTGTTCGGGCTTTATTCCAGTGGTGGTCGATTACTGGTATTAGGTCCACCGGCGAGGATTTGGTTTTCGAGGTTGGGTTGATCACTGCGAAGTACCCCTCCAAGAGTTTCAACGAGAGCCCAGTGTGTGAAGGCCGTCGGTCTTCTTCGTAAGAGGTTCGGGTTTCTGCTATTTATTTTACCGTTAATTCCATTGTTAGGATTGAAATTTGAGAAGTAATTTTGGGTTTTGTTGTTACAAGTGAAGTAGACTTTTTACCTAACTCGATAAGCACTTTGTGATTGTGGGGTTGAGAGTAATGTTTTCAGTCTTTGCATTGGTGAGAATCTGTAGGAATAGGTCACTGTTGGCTTAAATTTTCTAATGTTTTTCTTTTTAAATTGATTGGATTCTTGTTATCTTCAATATCCATGAATTTTGAACAGATGCTGTATACTTTCTCCATATTCATACTGTGCCTAATTTCAGGTTCTCTTGATTATACCTTGATTAATTTGAGATGTTAAATAAGGTATCTTTTTCTGTTTAATTTGATTATACCCTGATTAATTTGAGATGTTAAAACTTCCAGCATTTATTATGATACGAGAAAATTATAGTTTCCCGACGTTGC

mRNA sequence

ATGAAATCTATCTTCCTTCTCTTTCTCTTCTCAGCCCTCCTTTCCCTTTCCACTCAATCCATTGACTCCAAAAACCTAAACATTCCACCTTCCTCTGCTCATGCTCGCCTCGCCGATTACGGATTCCCCTTCGGCCTTCTCCCCTCCGCCGTCTCCTCCTACACCATTAACGATACCTCTGGTGACTTCTCTTTGGACCTCGGTGATTCCTGCAAGTTCACACTTCCTCCAGACAACTACGTGGCTTCCTTTTCTAGGGTTGTCACTGGTAAGATTGCCAAGGGTCGGATCCACAATCTTGATGGCATTCGTGTTCGGGCTTTATTCCAGTGGTGGTCGATTACTGGTATTAGGTCCACCGGCGAGGATTTGGTTTTCGAGGTTGGGTTGATCACTGCGAAGTACCCCTCCAAGAGTTTCAACGAGAGCCCAGTGTGTGAAGGCCGTCGGTCTTCTTCGTAA

Coding sequence (CDS)

ATGAAATCTATCTTCCTTCTCTTTCTCTTCTCAGCCCTCCTTTCCCTTTCCACTCAATCCATTGACTCCAAAAACCTAAACATTCCACCTTCCTCTGCTCATGCTCGCCTCGCCGATTACGGATTCCCCTTCGGCCTTCTCCCCTCCGCCGTCTCCTCCTACACCATTAACGATACCTCTGGTGACTTCTCTTTGGACCTCGGTGATTCCTGCAAGTTCACACTTCCTCCAGACAACTACGTGGCTTCCTTTTCTAGGGTTGTCACTGGTAAGATTGCCAAGGGTCGGATCCACAATCTTGATGGCATTCGTGTTCGGGCTTTATTCCAGTGGTGGTCGATTACTGGTATTAGGTCCACCGGCGAGGATTTGGTTTTCGAGGTTGGGTTGATCACTGCGAAGTACCCCTCCAAGAGTTTCAACGAGAGCCCAGTGTGTGAAGGCCGTCGGTCTTCTTCGTAA

Protein sequence

MKSIFLLFLFSALLSLSTQSIDSKNLNIPPSSAHARLADYGFPFGLLPSAVSSYTINDTSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRSTGEDLVFEVGLITAKYPSKSFNESPVCEGRRSSS

Homology

[Close]

BLAST of CsaV3_1G030790 vs. NCBI nr
Match: XP_004148715.1 (PREDICTED: uncharacterized protein LOC101218800 [Cucumis sativus] >KGN65370.1 hypothetical protein Csa_1G385550 [Cucumis sativus])

HSP 1 Score: 306.2 bits (783), Expect = 6.2e-80
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MKSIFLLFLFSALLSLSTQSIDSKNLNIPPSSAHARLADYGFPFGLLPSAVSSYTINDTS 60
           MKSIFLLFLFSALLSLSTQSIDSKNLNIPPSSAHARLADYGFPFGLLPSAVSSYTINDTS
Sbjct: 1   MKSIFLLFLFSALLSLSTQSIDSKNLNIPPSSAHARLADYGFPFGLLPSAVSSYTINDTS 60

Query: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST 120
           GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST
Sbjct: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST 120

Query: 121 GEDLVFEVGLITAKYPSKSFNESPVCEGRRSSS 154
           GEDLVFEVGLITAKYPSKSFNESPVCEGRRSSS
Sbjct: 121 GEDLVFEVGLITAKYPSKSFNESPVCEGRRSSS 153

[Close]

BLAST of CsaV3_1G030790 vs. NCBI nr
Match: XP_008463372.1 (PREDICTED: uncharacterized protein LOC103501542 [Cucumis melo])

HSP 1 Score: 301.6 bits (771), Expect = 1.5e-78
Identity = 150/153 (98.04%), Postives = 152/153 (99.35%), Query Frame = 0


Query: 1   MKSIFLLFLFSALLSLSTQSIDSKNLNIPPSSAHARLADYGFPFGLLPSAVSSYTINDTS 60
           MKSIFLLFLFSALL LSTQSIDSKNLNIPPSSAHARLADYGFPFGLLPSAVS+YTIN+TS
Sbjct: 1   MKSIFLLFLFSALLPLSTQSIDSKNLNIPPSSAHARLADYGFPFGLLPSAVSTYTINETS 60

Query: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST 120
           GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST
Sbjct: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST 120

Query: 121 GEDLVFEVGLITAKYPSKSFNESPVCEGRRSSS 154
           GEDLVFEVGLITAKYPSKSFNESPVCEGRRSSS
Sbjct: 121 GEDLVFEVGLITAKYPSKSFNESPVCEGRRSSS 153

[Close]

BLAST of CsaV3_1G030790 vs. NCBI nr
Match: XP_022961236.1 (uncharacterized protein LOC111461806 [Cucurbita moschata] >XP_022987892.1 uncharacterized protein LOC111485298 [Cucurbita maxima])

HSP 1 Score: 289.3 bits (739), Expect = 7.9e-75
Identity = 143/153 (93.46%), Postives = 149/153 (97.39%), Query Frame = 0


Query: 1   MKSIFLLFLFSALLSLSTQSIDSKNLNIPPSSAHARLADYGFPFGLLPSAVSSYTINDTS 60
           MKSIF+LFLFSAL+SLSTQS DS +L  PPSSAHARLA+YGFPFGLLPSAVSSYTIN+TS
Sbjct: 1   MKSIFVLFLFSALVSLSTQSTDSNDLKAPPSSAHARLANYGFPFGLLPSAVSSYTINETS 60

Query: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST 120
           GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST
Sbjct: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST 120

Query: 121 GEDLVFEVGLITAKYPSKSFNESPVCEGRRSSS 154
           GEDLVFEVG+ITAKYPSKSFNESPVCEGRRSSS
Sbjct: 121 GEDLVFEVGVITAKYPSKSFNESPVCEGRRSSS 153

[Close]

BLAST of CsaV3_1G030790 vs. NCBI nr
Match: XP_023515647.1 (uncharacterized protein LOC111779757 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 284.6 bits (727), Expect = 1.9e-73
Identity = 141/153 (92.16%), Postives = 148/153 (96.73%), Query Frame = 0


Query: 1   MKSIFLLFLFSALLSLSTQSIDSKNLNIPPSSAHARLADYGFPFGLLPSAVSSYTINDTS 60
           MKSIF+LFLFSAL+SLSTQS DS +L  PPSSAHARLA+YGFPFGLLPSAVSSYTIN+TS
Sbjct: 1   MKSIFVLFLFSALVSLSTQSTDSNDLKAPPSSAHARLANYGFPFGLLPSAVSSYTINETS 60

Query: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST 120
           GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAK RIHNL+GIRVRALFQWWSITGIRST
Sbjct: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKDRIHNLNGIRVRALFQWWSITGIRST 120

Query: 121 GEDLVFEVGLITAKYPSKSFNESPVCEGRRSSS 154
           GEDLVFEVG+ITAKYPSKSFNESPVCEGRRSSS
Sbjct: 121 GEDLVFEVGVITAKYPSKSFNESPVCEGRRSSS 153

[Close]

BLAST of CsaV3_1G030790 vs. NCBI nr
Match: XP_022144910.1 (uncharacterized protein LOC111014474 [Momordica charantia])

HSP 1 Score: 283.5 bits (724), Expect = 4.3e-73
Identity = 138/153 (90.20%), Postives = 149/153 (97.39%), Query Frame = 0


Query: 1   MKSIFLLFLFSALLSLSTQSIDSKNLNIPPSSAHARLADYGFPFGLLPSAVSSYTINDTS 60
           MKSIF+LF+FSAL+SLSTQ+ DSK+L IPPSSAHARLA+YGFPFGLLPS+V SYTINDTS
Sbjct: 1   MKSIFILFIFSALVSLSTQTTDSKDLKIPPSSAHARLANYGFPFGLLPSSVVSYTINDTS 60

Query: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST 120
           GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIH+LDGIRVRALFQWWSITGIRS+
Sbjct: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHSLDGIRVRALFQWWSITGIRSS 120

Query: 121 GEDLVFEVGLITAKYPSKSFNESPVCEGRRSSS 154
           G+DLVFEVGLITAKYPSKSFNESP CEGRRS+S
Sbjct: 121 GDDLVFEVGLITAKYPSKSFNESPACEGRRSAS 153

[Close]

BLAST of CsaV3_1G030790 vs. TAIR10
Match: AT5G19590.1 (Protein of unknown function, DUF538)

HSP 1 Score: 171.8 bits (434), Expect = 3.3e-43
Identity = 87/147 (59.18%), Postives = 108/147 (73.47%), Query Frame = 0


Query: 7   LFLFSALLSLSTQSIDSKNLNIPPSSAHARLADYGFPFGLLPSAVSSYTINDTSGDFSLD 66
           LFL S L+ L     D       P+ AHA L ++GFP GLLP +V  Y +N TSGDFSL 
Sbjct: 5   LFLLSILILLPISLQDPTPEVKKPTRAHAELTNHGFPIGLLPLSVKDYFLNQTSGDFSLF 64

Query: 67  LGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRSTGEDLVF 126
           L  +CK TLPPDNY+A++S  VTG+I++G+I  L GIRVRA F+ WSITGIRS+G++LVF
Sbjct: 65  LNGACKITLPPDNYIATYSNKVTGRISQGKIAELQGIRVRAFFKSWSITGIRSSGDNLVF 124

Query: 127 EVGLITAKYPSKSFNESPVCEGRRSSS 154
           EV  ITAKYPSK+F+ES  CEG+RSSS
Sbjct: 125 EVAGITAKYPSKNFDESLDCEGKRSSS 151

[Close]

BLAST of CsaV3_1G030790 vs. TAIR10
Match: AT4G02360.1 (Protein of unknown function, DUF538)

HSP 1 Score: 89.7 bits (221), Expect = 1.7e-18
Identity = 39/107 (36.45%), Postives = 62/107 (57.94%), Query Frame = 0


Query: 40  YGFPFGLLPSAVSSYTINDTSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHN 99
           Y  P G+LP  V  Y +N  +G+F +   D+C+FT+   +Y   +   ++G I+ G + N
Sbjct: 36  YNLPPGILPKGVVDYELNPKTGNFKVYFNDTCEFTI--QSYQLKYKSTISGVISPGHVKN 95

Query: 100 LDGIRVRALFQWWSITGIRSTGEDLVFEVGLITAKYPSKSFNESPVC 147
           L G+ V+ LF W +I  +   G DL F VG+ +A +P+ +F ESP C
Sbjct: 96  LKGVSVKVLFFWVNIAEVSLDGADLDFSVGIASASFPAANFEESPQC 140

[Close]

BLAST of CsaV3_1G030790 vs. TAIR10
Match: AT4G02370.1 (Protein of unknown function, DUF538)

HSP 1 Score: 87.4 bits (215), Expect = 8.2e-18
Identity = 42/134 (31.34%), Postives = 75/134 (55.97%), Query Frame = 0


Query: 13  LLSLSTQSIDSKNLNIPPSSAHARLADYGFPFGLLPSAVSSYTINDTSGDFSLDLGDSCK 72
           L SL+   + +   + P  +A++ L  Y FP G+LP  V +Y ++ T+G F     DSC 
Sbjct: 14  LSSLTAAVVTAAESDTP--TAYSLLQSYNFPVGILPKGVVAYDLDTTTGKFHAYFNDSCS 73

Query: 73  FTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRSTGEDLVFEVGLIT 132
           F L   +Y  ++   ++G I++ ++  L G++V+ LF W +I  +   G+++ F VG+ +
Sbjct: 74  FNL-VGSYQLNYKSTISGYISENKLKKLTGVKVKVLFLWLNIVEVIRNGDEMEFSVGITS 133

Query: 133 AKYPSKSFNESPVC 147
           A +  + F ESP C
Sbjct: 134 ANFAIQEFLESPQC 144

[Close]

BLAST of CsaV3_1G030790 vs. TAIR10
Match: AT1G02816.1 (Protein of unknown function, DUF538)

HSP 1 Score: 86.7 bits (213), Expect = 1.4e-17
Identity = 49/144 (34.03%), Postives = 75/144 (52.08%), Query Frame = 0


Query: 3   SIFLLFLFSALLSLSTQSIDSKNLNIPPSSAHARLADYGFPFGLLPSAVSSYTINDTSGD 62
           SIF  FLF     L   + D    +IP  +A+  L  Y FP G+LP  V SY ++ ++G 
Sbjct: 7   SIFFFFLFCIPSPLIAAANDD---DIP--TAYTLLQSYNFPVGILPKGVVSYDLDKSTGQ 66

Query: 63  FSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRSTGE 122
           F      SC F L   +Y   +   ++G I++ +I  L G++V+ LF W +I  +   G+
Sbjct: 67  FHAYFNKSCSFAL-QGSYQLDYKSTISGYISENKITKLTGVKVKVLFLWLNIVEVIRNGD 126

Query: 123 DLVFEVGLITAKYPSKSFNESPVC 147
           +L F VG+ +A +    F ESP C
Sbjct: 127 ELEFSVGITSANFEIDEFYESPQC 144

[Close]

BLAST of CsaV3_1G030790 vs. TAIR10
Match: AT1G02813.1 (Protein of unknown function, DUF538)

HSP 1 Score: 84.7 bits (208), Expect = 5.3e-17
Identity = 49/144 (34.03%), Postives = 78/144 (54.17%), Query Frame = 0


Query: 3   SIFLLFLFSALLSLSTQSIDSKNLNIPPSSAHARLADYGFPFGLLPSAVSSYTINDTSGD 62
           SIF++FL   LLS S      K       S +  L +Y  P G+LP  V  Y +N  +G 
Sbjct: 2   SIFIIFLL--LLSTSVSVSGQKK-----RSVYQVLENYTLPRGILPEGVHDYDLNRRTGV 61

Query: 63  FSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRSTGE 122
           F +    +C+F++  D+Y   +  V++G I +GR+  L G+ V+ LF W +I+ +   G+
Sbjct: 62  FKVRFNTTCQFSI--DSYKVKYKPVISGIITRGRVIRLIGVSVKVLFFWINISEVSRDGD 121

Query: 123 DLVFEVGLITAKYPSKSFNESPVC 147
           D+ F VG  + ++ SK F +SP C
Sbjct: 122 DVEFFVGAASEEFSSKYFVDSPKC 136

[Close]

BLAST of CsaV3_1G030790 vs. TrEMBL
Match: tr|A0A0A0LTW9|A0A0A0LTW9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G385550 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 4.1e-80
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MKSIFLLFLFSALLSLSTQSIDSKNLNIPPSSAHARLADYGFPFGLLPSAVSSYTINDTS 60
           MKSIFLLFLFSALLSLSTQSIDSKNLNIPPSSAHARLADYGFPFGLLPSAVSSYTINDTS
Sbjct: 1   MKSIFLLFLFSALLSLSTQSIDSKNLNIPPSSAHARLADYGFPFGLLPSAVSSYTINDTS 60

Query: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST 120
           GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST
Sbjct: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST 120

Query: 121 GEDLVFEVGLITAKYPSKSFNESPVCEGRRSSS 154
           GEDLVFEVGLITAKYPSKSFNESPVCEGRRSSS
Sbjct: 121 GEDLVFEVGLITAKYPSKSFNESPVCEGRRSSS 153

[Close]

BLAST of CsaV3_1G030790 vs. TrEMBL
Match: tr|A0A1S3CJ18|A0A1S3CJ18_CUCME (uncharacterized protein LOC103501542 OS=Cucumis melo OX=3656 GN=LOC103501542 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 1.0e-78
Identity = 150/153 (98.04%), Postives = 152/153 (99.35%), Query Frame = 0


Query: 1   MKSIFLLFLFSALLSLSTQSIDSKNLNIPPSSAHARLADYGFPFGLLPSAVSSYTINDTS 60
           MKSIFLLFLFSALL LSTQSIDSKNLNIPPSSAHARLADYGFPFGLLPSAVS+YTIN+TS
Sbjct: 1   MKSIFLLFLFSALLPLSTQSIDSKNLNIPPSSAHARLADYGFPFGLLPSAVSTYTINETS 60

Query: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST 120
           GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST
Sbjct: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST 120

Query: 121 GEDLVFEVGLITAKYPSKSFNESPVCEGRRSSS 154
           GEDLVFEVGLITAKYPSKSFNESPVCEGRRSSS
Sbjct: 121 GEDLVFEVGLITAKYPSKSFNESPVCEGRRSSS 153

[Close]

BLAST of CsaV3_1G030790 vs. TrEMBL
Match: tr|A0A067KKG9|A0A067KKG9_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_13234 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 3.2e-48
Identity = 95/154 (61.69%), Postives = 121/154 (78.57%), Query Frame = 0


Query: 1   MKSIFLLFLFSALLSLSTQSIDSKNLN-IPPSSAHARLADYGFPFGLLPSAVSSYTINDT 60
           M  +F LF    L+++S+    + N N IPPS+AH  L +YGFP GLLP++V +YT+N  
Sbjct: 1   MTKLFSLFSLFLLIAVSSPRTTAVNPNPIPPSAAHVELTNYGFPIGLLPASVRNYTLNPI 60

Query: 61  SGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRS 120
           SG F +D G SCK TLPPDNY+A++S+ V+GKI +GRI  LDGIRVRA F+WWSITGIRS
Sbjct: 61  SGQFFVDFGGSCKITLPPDNYLATYSKTVSGKIVQGRIAELDGIRVRAFFKWWSITGIRS 120

Query: 121 TGEDLVFEVGLITAKYPSKSFNESPVCEGRRSSS 154
           +GEDLVFEVG++TAKYPSK+F+ESP CEG+ SSS
Sbjct: 121 SGEDLVFEVGMVTAKYPSKNFDESPDCEGKHSSS 154

[Close]

BLAST of CsaV3_1G030790 vs. TrEMBL
Match: tr|A0A2P6RJK2|A0A2P6RJK2_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0090991 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 2.1e-47
Identity = 95/153 (62.09%), Postives = 120/153 (78.43%), Query Frame = 0


Query: 5   FLLFLFSALL--SLSTQSIDSKNLN--IPPSSAHARLADYGFPFGLLPSAVSSYTINDTS 64
           +LLF F+ +L  SLS+Q+ D K  N    PS AH  L  YGFP GLLPS V +YT+N  +
Sbjct: 4   YLLFFFALILLVSLSSQTADPKTQNPTRTPSPAHTELTRYGFPIGLLPSPVKNYTVNPLT 63

Query: 65  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST 124
           GDF +DLGD+CK TLPPDNY+A++S+ VTGKI  GRI  ++GI VRA +QWWSITGIRS+
Sbjct: 64  GDFVVDLGDACKITLPPDNYLATYSKKVTGKINHGRIAEINGISVRAFYQWWSITGIRSS 123

Query: 125 GEDLVFEVGLITAKYPSKSFNESPVCEGRRSSS 154
           GE+LVFEVG++TA+YPSK+FN+SP CEGRR S+
Sbjct: 124 GENLVFEVGMVTARYPSKNFNDSPACEGRRHSA 156

[Close]

BLAST of CsaV3_1G030790 vs. TrEMBL
Match: tr|A0A2P2JPQ1|A0A2P2JPQ1_RHIMU (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 2.7e-47
Identity = 95/154 (61.69%), Postives = 124/154 (80.52%), Query Frame = 0


Query: 1   MKSIFLLFLFSALLSLSTQSIDSKNLNIP-PSSAHARLADYGFPFGLLPSAVSSYTINDT 60
           M  +  +  F  L+ L  QS  S+N N   PS+AH++L +YGFP GLLP++V +YT+N T
Sbjct: 1   MAKMLRVLSFLLLIPLFHQSRASQNPNPKHPSAAHSQLTNYGFPIGLLPTSVRNYTLNHT 60

Query: 61  SGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRS 120
           SGDFS++LG +C+ TLPPDNY+A++S+ VTGKI +GRI  LDGIRVRA F+WWSITGIRS
Sbjct: 61  SGDFSVNLGGACRITLPPDNYLATYSKKVTGKIVQGRIAKLDGIRVRAFFKWWSITGIRS 120

Query: 121 TGEDLVFEVGLITAKYPSKSFNESPVCEGRRSSS 154
           +GE+LVFEVG++TAKYPSK+F+ESP CEG+RS S
Sbjct: 121 SGENLVFEVGMVTAKYPSKNFDESPDCEGKRSDS 154

The following BLAST results are available for this feature:

BLAST of CsaV3_1G030790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148715.1	6.2e-80	100.00	PREDICTED: uncharacterized protein LOC101218800 [Cucumis sativus] >KGN65370.1 hy...	[more]
XP_008463372.1	1.5e-78	98.04	PREDICTED: uncharacterized protein LOC103501542 [Cucumis melo]	[more]
XP_022961236.1	7.9e-75	93.46	uncharacterized protein LOC111461806 [Cucurbita moschata] >XP_022987892.1 unchar...	[more]
XP_023515647.1	1.9e-73	92.16	uncharacterized protein LOC111779757 [Cucurbita pepo subsp. pepo]	[more]
XP_022144910.1	4.3e-73	90.20	uncharacterized protein LOC111014474 [Momordica charantia]	[more]

BLAST of CsaV3_1G030790 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G19590.1	3.3e-43	59.18	Protein of unknown function, DUF538	[more]
AT4G02360.1	1.7e-18	36.45	Protein of unknown function, DUF538	[more]
AT4G02370.1	8.2e-18	31.34	Protein of unknown function, DUF538	[more]
AT1G02816.1	1.4e-17	34.03	Protein of unknown function, DUF538	[more]
AT1G02813.1	5.3e-17	34.03	Protein of unknown function, DUF538	[more]

BLAST of CsaV3_1G030790 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_1G030790 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LTW9\|A0A0A0LTW9_CUCSA	4.1e-80	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G385550 PE=4 SV=1	[more]
tr\|A0A1S3CJ18\|A0A1S3CJ18_CUCME	1.0e-78	98.04	uncharacterized protein LOC103501542 OS=Cucumis melo OX=3656 GN=LOC103501542 PE=...	[more]
tr\|A0A067KKG9\|A0A067KKG9_JATCU	3.2e-48	61.69	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_13234 PE=4 SV=1	[more]
tr\|A0A2P6RJK2\|A0A2P6RJK2_ROSCH	2.1e-47	62.09	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0090991 PE=4...	[more]
tr\|A0A2P2JPQ1\|A0A2P2JPQ1_RHIMU	2.7e-47	61.69	Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036758	At5g01610-like
IPR007493	DUF538

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006635	fatty acid beta-oxidation
biological_process	GO:0016558	protein import into peroxisome matrix
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G030790.1	CsaV3_1G030790.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 35..140 e-value: 4.1E-28 score: 98.0
IPR007493	Protein of unknown function DUF538	PANTHER	PTHR31676	FAMILY NOT NAMED	coord: 4..152
IPR036758	At5g01610-like superfamily	GENE3D	G3DSA:2.30.240.10		coord: 18..143 e-value: 1.0E-25 score: 92.1
IPR036758	At5g01610-like superfamily	SUPERFAMILY	SSF141562	At5g01610-like	coord: 5..147
None	No IPR available	PANTHER	PTHR31676:SF3	SUBFAMILY NOT NAMED	coord: 4..152

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G030790	CSPI01G19460	Wild cucumber (PI 183967)	cpicucB000
CsaV3_1G030790	Cucsa.235700	Cucumber (Gy14) v1	cgycucB353
CsaV3_1G030790	CmaCh10G006000	Cucurbita maxima (Rimu)	cmacucB0073
CsaV3_1G030790	CmaCh11G005960	Cucurbita maxima (Rimu)	cmacucB0110
CsaV3_1G030790	CmoCh10G006400	Cucurbita moschata (Rifu)	cmocucB0060
CsaV3_1G030790	Cp4.1LG18g04390	Cucurbita pepo (Zucchini)	cpecucB0434
CsaV3_1G030790	CsGy1G019270	Cucumber (Gy14) v2	cgybcucB001
CsaV3_1G030790	Carg12180	Silver-seed gourd	carcucB0039
CsaV3_1G030790	Carg09868	Silver-seed gourd	carcucB0144
CsaV3_1G030790	Cla012332	Watermelon (97103) v1	cucwmB095
CsaV3_1G030790	MELO3C025322	Melon (DHL92) v3.5.1	cucmeB058
CsaV3_1G030790	ClCG06G010340	Watermelon (Charleston Gray)	cucwcgB078
CsaV3_1G030790	Lsi06G008960	Bottle gourd (USVL1VR-Ls)	cuclsiB072
CsaV3_1G030790	MELO3C025322.2	Melon (DHL92) v3.6.1	cucmedB055
CsaV3_1G030790	Cla97C06G119590	Watermelon (97103) v2	cucwmbB067
CsaV3_1G030790	Bhi02G000920	Wax gourd	cucwgoB108

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G030790	Cucumber (Chinese Long) v3	cuccucB009
CsaV3_1G030790	Silver-seed gourd	carcucB0040
CsaV3_1G030790	Silver-seed gourd	carcucB0603
CsaV3_1G030790	Cucumber (Gy14) v2	cgybcucB059
CsaV3_1G030790	Cucumber (Gy14) v1	cgycucB155
CsaV3_1G030790	Cucurbita maxima (Rimu)	cmacucB0116
CsaV3_1G030790	Cucurbita moschata (Rifu)	cmocucB0104
CsaV3_1G030790	Cucurbita pepo (Zucchini)	cpecucB0105
CsaV3_1G030790	Cucurbita pepo (Zucchini)	cpecucB0800
CsaV3_1G030790	Wild cucumber (PI 183967)	cpicucB073
CsaV3_1G030790	Bottle gourd (USVL1VR-Ls)	cuclsiB010
CsaV3_1G030790	Melon (DHL92) v3.5.1	cucmeB082
CsaV3_1G030790	Melon (DHL92) v3.6.1	cucmedB076
CsaV3_1G030790	Watermelon (Charleston Gray)	cucwcgB009
CsaV3_1G030790	Watermelon (97103) v1	cucwmB090
CsaV3_1G030790	Watermelon (97103) v2	cucwmbB019