Carg12180 (gene) Silver-seed gourd

Overview
NameCarg12180
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionProtein of unknown function, DUF538
LocationCucurbita_argyrosperma_scaffold_054 : 342902 .. 343363 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAATCCATCTTCGTTCTCTTTCTCTTCTCAGCCCTCGTTTCTGTTTCGACCCAATCCACGGATTCAAAAGGCCCAACAATTCCGCCGTCCTCTGCTCACGCTCGCCTTGCCAATTACGGATTTCCGTTCGGCCTTCTGCCGTCTACTGTCTCGAGCTACACCATTAATGAGACCTCCGGAGACTTCTCTTTAGACCTGGGTGACTCGTGCAAGTTCACGCTTCCACCGGACAACTACGTGGCTTCCTTTTCTAGGGTTGTCACCGGTAAGATTGCAAAGGGTCGAATCCACAATCTAAACGGGATTCGAGTCCGCGCGTTGTTCCAGTGGTGGTCGATTACTGGAATTAAGTCCACCGGCGAGGATTTGGTGTTCGAGGTGGGGATGATCACCGCTAAGTATCCATCCAAGACTTTCAACGACAGCCCTGTGTGTGAAGGGCGTCTGTCGGCTTCGTAA

mRNA sequence

ATGAAATCCATCTTCGTTCTCTTTCTCTTCTCAGCCCTCGTTTCTGTTTCGACCCAATCCACGGATTCAAAAGGCCCAACAATTCCGCCGTCCTCTGCTCACGCTCGCCTTGCCAATTACGGATTTCCGTTCGGCCTTCTGCCGTCTACTGTCTCGAGCTACACCATTAATGAGACCTCCGGAGACTTCTCTTTAGACCTGGGTGACTCGTGCAAGTTCACGCTTCCACCGGACAACTACGTGGCTTCCTTTTCTAGGGTTGTCACCGGTAAGATTGCAAAGGGTCGAATCCACAATCTAAACGGGATTCGAGTCCGCGCGTTGTTCCAGTGGTGGTCGATTACTGGAATTAAGTCCACCGGCGAGGATTTGGTGTTCGAGGTGGGGATGATCACCGCTAAGTATCCATCCAAGACTTTCAACGACAGCCCTGTGTGTGAAGGGCGTCTGTCGGCTTCGTAA

Coding sequence (CDS)

ATGAAATCCATCTTCGTTCTCTTTCTCTTCTCAGCCCTCGTTTCTGTTTCGACCCAATCCACGGATTCAAAAGGCCCAACAATTCCGCCGTCCTCTGCTCACGCTCGCCTTGCCAATTACGGATTTCCGTTCGGCCTTCTGCCGTCTACTGTCTCGAGCTACACCATTAATGAGACCTCCGGAGACTTCTCTTTAGACCTGGGTGACTCGTGCAAGTTCACGCTTCCACCGGACAACTACGTGGCTTCCTTTTCTAGGGTTGTCACCGGTAAGATTGCAAAGGGTCGAATCCACAATCTAAACGGGATTCGAGTCCGCGCGTTGTTCCAGTGGTGGTCGATTACTGGAATTAAGTCCACCGGCGAGGATTTGGTGTTCGAGGTGGGGATGATCACCGCTAAGTATCCATCCAAGACTTTCAACGACAGCCCTGTGTGTGAAGGGCGTCTGTCGGCTTCGTAA

Protein sequence

MKSIFVLFLFSALVSVSTQSTDSKGPTIPPSSAHARLANYGFPFGLLPSTVSSYTINETSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLNGIRVRALFQWWSITGIKSTGEDLVFEVGMITAKYPSKTFNDSPVCEGRLSAS
Homology
[Close]
BLAST of Carg12180 vs. NCBI nr
Match: XP_022961236.1 (uncharacterized protein LOC111461806 [Cucurbita moschata] >XP_022987892.1 uncharacterized protein LOC111485298 [Cucurbita maxima])

HSP 1 Score: 281.6 bits (719), Expect = 1.6e-72
Identity = 139/153 (90.85%), Postives = 146/153 (95.42%), Query Frame = 0 

Query: 1   MKSIFVLFLFSALVSVSTQSTDSKGPTIPPSSAHARLANYGFPFGLLPSTVSSYTINETS 60
           MKSIFVLFLFSALVS+STQSTDS     PPSSAHARLANYGFPFGLLPS VSSYTINETS
Sbjct: 1   MKSIFVLFLFSALVSLSTQSTDSNDLKAPPSSAHARLANYGFPFGLLPSAVSSYTINETS 60

Query: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLNGIRVRALFQWWSITGIKST 120
           GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNL+GIRVRALFQWWSITGI+ST
Sbjct: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST 120

Query: 121 GEDLVFEVGMITAKYPSKTFNDSPVCEGRLSAS 154
           GEDLVFEVG+ITAKYPSK+FN+SPVCEGR S+S
Sbjct: 121 GEDLVFEVGVITAKYPSKSFNESPVCEGRRSSS 153

[Close]
BLAST of Carg12180 vs. NCBI nr
Match: XP_023515647.1 (uncharacterized protein LOC111779757 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 280.8 bits (717), Expect = 2.8e-72
Identity = 139/153 (90.85%), Postives = 145/153 (94.77%), Query Frame = 0 

Query: 1   MKSIFVLFLFSALVSVSTQSTDSKGPTIPPSSAHARLANYGFPFGLLPSTVSSYTINETS 60
           MKSIFVLFLFSALVS+STQSTDS     PPSSAHARLANYGFPFGLLPS VSSYTINETS
Sbjct: 1   MKSIFVLFLFSALVSLSTQSTDSNDLKAPPSSAHARLANYGFPFGLLPSAVSSYTINETS 60

Query: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLNGIRVRALFQWWSITGIKST 120
           GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAK RIHNLNGIRVRALFQWWSITGI+ST
Sbjct: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKDRIHNLNGIRVRALFQWWSITGIRST 120

Query: 121 GEDLVFEVGMITAKYPSKTFNDSPVCEGRLSAS 154
           GEDLVFEVG+ITAKYPSK+FN+SPVCEGR S+S
Sbjct: 121 GEDLVFEVGVITAKYPSKSFNESPVCEGRRSSS 153

[Close]
BLAST of Carg12180 vs. NCBI nr
Match: XP_004148715.1 (PREDICTED: uncharacterized protein LOC101218800 [Cucumis sativus] >KGN65370.1 hypothetical protein Csa_1G385550 [Cucumis sativus])

HSP 1 Score: 278.9 bits (712), Expect = 1.1e-71
Identity = 136/153 (88.89%), Postives = 147/153 (96.08%), Query Frame = 0 

Query: 1   MKSIFVLFLFSALVSVSTQSTDSKGPTIPPSSAHARLANYGFPFGLLPSTVSSYTINETS 60
           MKSIF+LFLFSAL+S+STQS DSK   IPPSSAHARLA+YGFPFGLLPS VSSYTIN+TS
Sbjct: 1   MKSIFLLFLFSALLSLSTQSIDSKNLNIPPSSAHARLADYGFPFGLLPSAVSSYTINDTS 60

Query: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLNGIRVRALFQWWSITGIKST 120
           GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNL+GIRVRALFQWWSITGI+ST
Sbjct: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST 120

Query: 121 GEDLVFEVGMITAKYPSKTFNDSPVCEGRLSAS 154
           GEDLVFEVG+ITAKYPSK+FN+SPVCEGR S+S
Sbjct: 121 GEDLVFEVGLITAKYPSKSFNESPVCEGRRSSS 153

[Close]
BLAST of Carg12180 vs. NCBI nr
Match: XP_008463372.1 (PREDICTED: uncharacterized protein LOC103501542 [Cucumis melo])

HSP 1 Score: 276.9 bits (707), Expect = 4.0e-71
Identity = 135/153 (88.24%), Postives = 146/153 (95.42%), Query Frame = 0 

Query: 1   MKSIFVLFLFSALVSVSTQSTDSKGPTIPPSSAHARLANYGFPFGLLPSTVSSYTINETS 60
           MKSIF+LFLFSAL+ +STQS DSK   IPPSSAHARLA+YGFPFGLLPS VS+YTINETS
Sbjct: 1   MKSIFLLFLFSALLPLSTQSIDSKNLNIPPSSAHARLADYGFPFGLLPSAVSTYTINETS 60

Query: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLNGIRVRALFQWWSITGIKST 120
           GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNL+GIRVRALFQWWSITGI+ST
Sbjct: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST 120

Query: 121 GEDLVFEVGMITAKYPSKTFNDSPVCEGRLSAS 154
           GEDLVFEVG+ITAKYPSK+FN+SPVCEGR S+S
Sbjct: 121 GEDLVFEVGLITAKYPSKSFNESPVCEGRRSSS 153

[Close]
BLAST of Carg12180 vs. NCBI nr
Match: XP_022144910.1 (uncharacterized protein LOC111014474 [Momordica charantia])

HSP 1 Score: 275.4 bits (703), Expect = 1.2e-70
Identity = 133/153 (86.93%), Postives = 147/153 (96.08%), Query Frame = 0 

Query: 1   MKSIFVLFLFSALVSVSTQSTDSKGPTIPPSSAHARLANYGFPFGLLPSTVSSYTINETS 60
           MKSIF+LF+FSALVS+STQ+TDSK   IPPSSAHARLANYGFPFGLLPS+V SYTIN+TS
Sbjct: 1   MKSIFILFIFSALVSLSTQTTDSKDLKIPPSSAHARLANYGFPFGLLPSSVVSYTINDTS 60

Query: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLNGIRVRALFQWWSITGIKST 120
           GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIH+L+GIRVRALFQWWSITGI+S+
Sbjct: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHSLDGIRVRALFQWWSITGIRSS 120

Query: 121 GEDLVFEVGMITAKYPSKTFNDSPVCEGRLSAS 154
           G+DLVFEVG+ITAKYPSK+FN+SP CEGR SAS
Sbjct: 121 GDDLVFEVGLITAKYPSKSFNESPACEGRRSAS 153

[Close]
BLAST of Carg12180 vs. TAIR10
Match: AT5G19590.1 (Protein of unknown function, DUF538)

HSP 1 Score: 170.6 bits (431), Expect = 7.3e-43
Identity = 83/147 (56.46%), Postives = 107/147 (72.79%), Query Frame = 0 

Query: 7   LFLFSALVSVSTQSTDSKGPTIPPSSAHARLANYGFPFGLLPSTVSSYTINETSGDFSLD 66
           LFL S L+ +     D       P+ AHA L N+GFP GLLP +V  Y +N+TSGDFSL 
Sbjct: 5   LFLLSILILLPISLQDPTPEVKKPTRAHAELTNHGFPIGLLPLSVKDYFLNQTSGDFSLF 64

Query: 67  LGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLNGIRVRALFQWWSITGIKSTGEDLVF 126
           L  +CK TLPPDNY+A++S  VTG+I++G+I  L GIRVRA F+ WSITGI+S+G++LVF
Sbjct: 65  LNGACKITLPPDNYIATYSNKVTGRISQGKIAELQGIRVRAFFKSWSITGIRSSGDNLVF 124

Query: 127 EVGMITAKYPSKTFNDSPVCEGRLSAS 154
           EV  ITAKYPSK F++S  CEG+ S+S
Sbjct: 125 EVAGITAKYPSKNFDESLDCEGKRSSS 151

[Close]
BLAST of Carg12180 vs. TAIR10
Match: AT1G02813.1 (Protein of unknown function, DUF538)

HSP 1 Score: 90.9 bits (224), Expect = 7.4e-19
Identity = 49/144 (34.03%), Postives = 77/144 (53.47%), Query Frame = 0 

Query: 3   SIFVLFLFSALVSVSTQSTDSKGPTIPPSSAHARLANYGFPFGLLPSTVSSYTINETSGD 62
           SIF++FL     SVS      +       S +  L NY  P G+LP  V  Y +N  +G 
Sbjct: 2   SIFIIFLLLLSTSVSVSGQKKR-------SVYQVLENYTLPRGILPEGVHDYDLNRRTGV 61

Query: 63  FSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLNGIRVRALFQWWSITGIKSTGE 122
           F +    +C+F++  D+Y   +  V++G I +GR+  L G+ V+ LF W +I+ +   G+
Sbjct: 62  FKVRFNTTCQFSI--DSYKVKYKPVISGIITRGRVIRLIGVSVKVLFFWINISEVSRDGD 121

Query: 123 DLVFEVGMITAKYPSKTFNDSPVC 147
           D+ F VG  + ++ SK F DSP C
Sbjct: 122 DVEFFVGAASEEFSSKYFVDSPKC 136

[Close]
BLAST of Carg12180 vs. TAIR10
Match: AT1G02816.1 (Protein of unknown function, DUF538)

HSP 1 Score: 87.8 bits (216), Expect = 6.3e-18
Identity = 47/144 (32.64%), Postives = 75/144 (52.08%), Query Frame = 0 

Query: 3   SIFVLFLFSALVSVSTQSTDSKGPTIPPSSAHARLANYGFPFGLLPSTVSSYTINETSGD 62
           SIF  FLF     +   + D   PT     A+  L +Y FP G+LP  V SY +++++G 
Sbjct: 7   SIFFFFLFCIPSPLIAAANDDDIPT-----AYTLLQSYNFPVGILPKGVVSYDLDKSTGQ 66

Query: 63  FSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLNGIRVRALFQWWSITGIKSTGE 122
           F      SC F L   +Y   +   ++G I++ +I  L G++V+ LF W +I  +   G+
Sbjct: 67  FHAYFNKSCSFAL-QGSYQLDYKSTISGYISENKITKLTGVKVKVLFLWLNIVEVIRNGD 126

Query: 123 DLVFEVGMITAKYPSKTFNDSPVC 147
           +L F VG+ +A +    F +SP C
Sbjct: 127 ELEFSVGITSANFEIDEFYESPQC 144

[Close]
BLAST of Carg12180 vs. TAIR10
Match: AT4G02370.1 (Protein of unknown function, DUF538)

HSP 1 Score: 87.0 bits (214), Expect = 1.1e-17
Identity = 46/140 (32.86%), Postives = 79/140 (56.43%), Query Frame = 0 

Query: 7   LFLFSALVSVSTQSTDSKGPTIPPSSAHARLANYGFPFGLLPSTVSSYTINETSGDFSLD 66
           LFL S   +V T + +S  PT     A++ L +Y FP G+LP  V +Y ++ T+G F   
Sbjct: 12  LFLSSLTAAVVT-AAESDTPT-----AYSLLQSYNFPVGILPKGVVAYDLDTTTGKFHAY 71

Query: 67  LGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLNGIRVRALFQWWSITGIKSTGEDLVF 126
             DSC F L   +Y  ++   ++G I++ ++  L G++V+ LF W +I  +   G+++ F
Sbjct: 72  FNDSCSFNL-VGSYQLNYKSTISGYISENKLKKLTGVKVKVLFLWLNIVEVIRNGDEMEF 131

Query: 127 EVGMITAKYPSKTFNDSPVC 147
            VG+ +A +  + F +SP C
Sbjct: 132 SVGITSANFAIQEFLESPQC 144

[Close]
BLAST of Carg12180 vs. TAIR10
Match: AT4G02360.1 (Protein of unknown function, DUF538)

HSP 1 Score: 85.9 bits (211), Expect = 2.4e-17
Identity = 47/144 (32.64%), Postives = 74/144 (51.39%), Query Frame = 0 

Query: 3   SIFVLFLFSALVSVSTQSTDSKGPTIPPSSAHARLANYGFPFGLLPSTVSSYTINETSGD 62
           SI     F+   +VS Q      PT     A+  +  Y  P G+LP  V  Y +N  +G+
Sbjct: 9   SIVFFLFFTVSFAVSGQK-----PT-----AYDAVKLYNLPPGILPKGVVDYELNPKTGN 68

Query: 63  FSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLNGIRVRALFQWWSITGIKSTGE 122
           F +   D+C+FT+   +Y   +   ++G I+ G + NL G+ V+ LF W +I  +   G 
Sbjct: 69  FKVYFNDTCEFTI--QSYQLKYKSTISGVISPGHVKNLKGVSVKVLFFWVNIAEVSLDGA 128

Query: 123 DLVFEVGMITAKYPSKTFNDSPVC 147
           DL F VG+ +A +P+  F +SP C
Sbjct: 129 DLDFSVGIASASFPAANFEESPQC 140

[Close]
BLAST of Carg12180 vs. TrEMBL
Match: tr|A0A0A0LTW9|A0A0A0LTW9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G385550 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 7.0e-72
Identity = 136/153 (88.89%), Postives = 147/153 (96.08%), Query Frame = 0 

Query: 1   MKSIFVLFLFSALVSVSTQSTDSKGPTIPPSSAHARLANYGFPFGLLPSTVSSYTINETS 60
           MKSIF+LFLFSAL+S+STQS DSK   IPPSSAHARLA+YGFPFGLLPS VSSYTIN+TS
Sbjct: 1   MKSIFLLFLFSALLSLSTQSIDSKNLNIPPSSAHARLADYGFPFGLLPSAVSSYTINDTS 60

Query: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLNGIRVRALFQWWSITGIKST 120
           GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNL+GIRVRALFQWWSITGI+ST
Sbjct: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST 120

Query: 121 GEDLVFEVGMITAKYPSKTFNDSPVCEGRLSAS 154
           GEDLVFEVG+ITAKYPSK+FN+SPVCEGR S+S
Sbjct: 121 GEDLVFEVGLITAKYPSKSFNESPVCEGRRSSS 153

[Close]
BLAST of Carg12180 vs. TrEMBL
Match: tr|A0A1S3CJ18|A0A1S3CJ18_CUCME (uncharacterized protein LOC103501542 OS=Cucumis melo OX=3656 GN=LOC103501542 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 2.7e-71
Identity = 135/153 (88.24%), Postives = 146/153 (95.42%), Query Frame = 0 

Query: 1   MKSIFVLFLFSALVSVSTQSTDSKGPTIPPSSAHARLANYGFPFGLLPSTVSSYTINETS 60
           MKSIF+LFLFSAL+ +STQS DSK   IPPSSAHARLA+YGFPFGLLPS VS+YTINETS
Sbjct: 1   MKSIFLLFLFSALLPLSTQSIDSKNLNIPPSSAHARLADYGFPFGLLPSAVSTYTINETS 60

Query: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLNGIRVRALFQWWSITGIKST 120
           GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNL+GIRVRALFQWWSITGI+ST
Sbjct: 61  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRST 120

Query: 121 GEDLVFEVGMITAKYPSKTFNDSPVCEGRLSAS 154
           GEDLVFEVG+ITAKYPSK+FN+SPVCEGR S+S
Sbjct: 121 GEDLVFEVGLITAKYPSKSFNESPVCEGRRSSS 153

[Close]
BLAST of Carg12180 vs. TrEMBL
Match: tr|A0A2P6RJK2|A0A2P6RJK2_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0090991 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 2.4e-48
Identity = 95/149 (63.76%), Postives = 117/149 (78.52%), Query Frame = 0 

Query: 5   FVLFLFS--ALVSVSTQSTDSK--GPTIPPSSAHARLANYGFPFGLLPSTVSSYTINETS 64
           ++LF F+   LVS+S+Q+ D K   PT  PS AH  L  YGFP GLLPS V +YT+N  +
Sbjct: 4   YLLFFFALILLVSLSSQTADPKTQNPTRTPSPAHTELTRYGFPIGLLPSPVKNYTVNPLT 63

Query: 65  GDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLNGIRVRALFQWWSITGIKST 124
           GDF +DLGD+CK TLPPDNY+A++S+ VTGKI  GRI  +NGI VRA +QWWSITGI+S+
Sbjct: 64  GDFVVDLGDACKITLPPDNYLATYSKKVTGKINHGRIAEINGISVRAFYQWWSITGIRSS 123

Query: 125 GEDLVFEVGMITAKYPSKTFNDSPVCEGR 150
           GE+LVFEVGM+TA+YPSK FNDSP CEGR
Sbjct: 124 GENLVFEVGMVTARYPSKNFNDSPACEGR 152

[Close]
BLAST of Carg12180 vs. TrEMBL
Match: tr|A0A067KKG9|A0A067KKG9_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_13234 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 4.1e-48
Identity = 94/154 (61.04%), Postives = 120/154 (77.92%), Query Frame = 0 

Query: 1   MKSIFVLFLFSALVSVSTQSTDSKGPT-IPPSSAHARLANYGFPFGLLPSTVSSYTINET 60
           M  +F LF    L++VS+  T +  P  IPPS+AH  L NYGFP GLLP++V +YT+N  
Sbjct: 1   MTKLFSLFSLFLLIAVSSPRTTAVNPNPIPPSAAHVELTNYGFPIGLLPASVRNYTLNPI 60

Query: 61  SGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLNGIRVRALFQWWSITGIKS 120
           SG F +D G SCK TLPPDNY+A++S+ V+GKI +GRI  L+GIRVRA F+WWSITGI+S
Sbjct: 61  SGQFFVDFGGSCKITLPPDNYLATYSKTVSGKIVQGRIAELDGIRVRAFFKWWSITGIRS 120

Query: 121 TGEDLVFEVGMITAKYPSKTFNDSPVCEGRLSAS 154
           +GEDLVFEVGM+TAKYPSK F++SP CEG+ S+S
Sbjct: 121 SGEDLVFEVGMVTAKYPSKNFDESPDCEGKHSSS 154

[Close]
BLAST of Carg12180 vs. TrEMBL
Match: tr|I3SSF7|I3SSF7_LOTJA (Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.2e-47
Identity = 93/152 (61.18%), Postives = 121/152 (79.61%), Query Frame = 0 

Query: 6   VLFLFSALVSVSTQSTDSKGPTIP---PSSAHARLANYGFPFGLLP-STVSSYTINETSG 65
           +L LF+ L++++++S  +  P  P   PSSAH  L NYGFP GLLP +TV  + +N+TSG
Sbjct: 5   ILILFALLLNLTSKSFQNPNPKPPKSTPSSAHIELTNYGFPVGLLPDTTVLGFAVNQTSG 64

Query: 66  DFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLNGIRVRALFQWWSITGIKSTG 125
           DFS+ LG +C+ TLPPDNYVA++S  +TGKI KGRI  LNGIRVRA FQWWSITGI+S+G
Sbjct: 65  DFSVRLGGACRITLPPDNYVATYSNTITGKIVKGRIAELNGIRVRAFFQWWSITGIRSSG 124

Query: 126 EDLVFEVGMITAKYPSKTFNDSPVCEGRLSAS 154
           +++VFEVGM+TAKYPSK F+DSP CEG+ S+S
Sbjct: 125 DNIVFEVGMVTAKYPSKNFDDSPACEGQRSSS 156

The following BLAST results are available for this feature:
BLAST of Carg12180 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022961236.11.6e-7290.85uncharacterized protein LOC111461806 [Cucurbita moschata] >XP_022987892.1 unchar... [more]
XP_023515647.12.8e-7290.85uncharacterized protein LOC111779757 [Cucurbita pepo subsp. pepo][more]
XP_004148715.11.1e-7188.89PREDICTED: uncharacterized protein LOC101218800 [Cucumis sativus] >KGN65370.1 hy... [more]
XP_008463372.14.0e-7188.24PREDICTED: uncharacterized protein LOC103501542 [Cucumis melo][more]
XP_022144910.11.2e-7086.93uncharacterized protein LOC111014474 [Momordica charantia][more]
BLAST of Carg12180 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G19590.17.3e-4356.46Protein of unknown function, DUF538[more]
AT1G02813.17.4e-1934.03Protein of unknown function, DUF538[more]
AT1G02816.16.3e-1832.64Protein of unknown function, DUF538[more]
AT4G02370.11.1e-1732.86Protein of unknown function, DUF538[more]
AT4G02360.12.4e-1732.64Protein of unknown function, DUF538[more]
BLAST of Carg12180 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg12180 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LTW9|A0A0A0LTW9_CUCSA7.0e-7288.89Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G385550 PE=4 SV=1[more]
tr|A0A1S3CJ18|A0A1S3CJ18_CUCME2.7e-7188.24uncharacterized protein LOC103501542 OS=Cucumis melo OX=3656 GN=LOC103501542 PE=... [more]
tr|A0A2P6RJK2|A0A2P6RJK2_ROSCH2.4e-4863.76Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0090991 PE=4... [more]
tr|A0A067KKG9|A0A067KKG9_JATCU4.1e-4861.04Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_13234 PE=4 SV=1[more]
tr|I3SSF7|I3SSF7_LOTJA1.2e-4761.18Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036758At5g01610-like
IPR007493DUF538
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg12180-RACarg12180-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007493Protein of unknown function DUF538PFAMPF04398DUF538coord: 35..140
e-value: 9.1E-29
score: 100.1
IPR007493Protein of unknown function DUF538PANTHERPTHR31676FAMILY NOT NAMEDcoord: 4..152
IPR036758At5g01610-like superfamilyGENE3DG3DSA:2.30.240.10coord: 20..143
e-value: 1.8E-26
score: 94.6
IPR036758At5g01610-like superfamilySUPERFAMILYSSF141562At5g01610-likecoord: 6..148
NoneNo IPR availablePANTHERPTHR31676:SF3SUBFAMILY NOT NAMEDcoord: 4..152

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg12180Cla012332Watermelon (97103) v1carwmB0041
Carg12180Csa1G385550Cucumber (Chinese Long) v2carcuB0038
Carg12180ClCG06G010340Watermelon (Charleston Gray)carwcgB0042
Carg12180CSPI01G19460Wild cucumber (PI 183967)carcpiB0039
Carg12180CmaCh11G005960Cucurbita maxima (Rimu)carcmaB0047
Carg12180CmaCh10G006000Cucurbita maxima (Rimu)carcmaB0046
Carg12180CmoCh10G006400Cucurbita moschata (Rifu)carcmoB0049
Carg12180CmoCh11G005980Cucurbita moschata (Rifu)carcmoB0050
Carg12180Lsi06G008960Bottle gourd (USVL1VR-Ls)carlsiB036
Carg12180Cp4.1LG18g04390Cucurbita pepo (Zucchini)carcpeB0053
Carg12180CsGy1G019270Cucumber (Gy14) v2carcgybB0037
Carg12180CsaV3_1G030790Cucumber (Chinese Long) v3carcucB0039
Carg12180Cla97C06G119590Watermelon (97103) v2carwmbB0036
Carg12180Bhi02G000920Wax gourdcarwgoB0047
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg12180Carg09868Silver-seed gourdcarcarB040
The following block(s) are covering this gene:
GeneOrganismBlock
Carg12180Silver-seed gourdcarcarB041
Carg12180Silver-seed gourdcarcarB044
Carg12180Silver-seed gourdcarcarB047
Carg12180Cucumber (Gy14) v2carcgybB0038
Carg12180Cucumber (Gy14) v2carcgybB0041
Carg12180Cucumber (Gy14) v1carcgyB0040
Carg12180Cucumber (Gy14) v1carcgyB0042
Carg12180Cucurbita maxima (Rimu)carcmaB0044
Carg12180Cucurbita maxima (Rimu)carcmaB0048
Carg12180Cucurbita maxima (Rimu)carcmaB0049
Carg12180Cucurbita moschata (Rifu)carcmoB0047
Carg12180Cucurbita moschata (Rifu)carcmoB0051
Carg12180Cucurbita moschata (Rifu)carcmoB0052
Carg12180Cucurbita pepo (Zucchini)carcpeB0049
Carg12180Cucurbita pepo (Zucchini)carcpeB0052
Carg12180Cucurbita pepo (Zucchini)carcpeB0054
Carg12180Cucurbita pepo (Zucchini)carcpeB0055
Carg12180Wild cucumber (PI 183967)carcpiB0041
Carg12180Wild cucumber (PI 183967)carcpiB0044
Carg12180Wild cucumber (PI 183967)carcpiB0045
Carg12180Cucumber (Chinese Long) v2carcuB0039
Carg12180Cucumber (Chinese Long) v2carcuB0042
Carg12180Cucumber (Chinese Long) v3carcucB0040
Carg12180Cucumber (Chinese Long) v3carcucB0045
Carg12180Cucumber (Chinese Long) v3carcucB0047
Carg12180Bottle gourd (USVL1VR-Ls)carlsiB033
Carg12180Bottle gourd (USVL1VR-Ls)carlsiB037
Carg12180Melon (DHL92) v3.5.1carmeB0035
Carg12180Melon (DHL92) v3.5.1carmeB0039
Carg12180Melon (DHL92) v3.6.1carmedB0036
Carg12180Melon (DHL92) v3.6.1carmedB0040
Carg12180Watermelon (Charleston Gray)carwcgB0037
Carg12180Watermelon (Charleston Gray)carwcgB0043
Carg12180Watermelon (97103) v1carwmB0038
Carg12180Watermelon (97103) v1carwmB0042
Carg12180Watermelon (97103) v2carwmbB0031
Carg12180Watermelon (97103) v2carwmbB0038
Carg12180Watermelon (97103) v2carwmbB0040
Carg12180Wax gourdcarwgoB0038
Carg12180Wax gourdcarwgoB0040
Carg12180Wax gourdcarwgoB0043