CsaV3_1G027970 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCTATACCTTTTGTCCGACGGACGAAGAATTGTTATGTTATTATCTTTATCACAAAGTAGTTGGGGGTTTCGTACCACCAATTATGTTATCTGTCGTAGACATTTATACAAAAGAACCTCCTCAAATATGGCAACAATGTGGAGGGGTTGATGGTCAGGATGTTCATTTCTTCACTTGTCTTAAAAAGAAAAAGTCTCGTGTTGTGAGGAAAGTTGGTCCCAATGGAGCCACATGGAGTGGTGAAAGCAAAGCAACCAAAGTGTTTTCTCATAATAATACTTTGGTTGGTGATTTTAAACGGTTTCATTATGAAAATCCTAAAATGAAGAAGGGTGGTCATCATAACAATAATTACTCATGGATCATGTATGAGTACACTCTTCACCCTAATCTTGTACCTGAAGGAGTTGTACACGACTCTTTTGTACTGTGTATGCTTCGAAAGAAGATCTTGAAACAAGATAAAAGAGCATTCTCTGCAATAAAACAAACATCATCTTGTCTTGATTGGCCAAACACGACGAAAGCAACAACAACGCAATTGGAAGTACACATTGATGATCTGAATACTAAACGCAGAAGAGTGGAAGAACAAATTTGCATTGATAGGGTTGAAGACGATTGTTTCATCAATATCGAACGATTTGGTGAACAACTTTTGAACGGATACAATTTGGAAGAACCACCCCAACTTCTTCCAGAGAGGTACGTAAAACAATTTGGTTTAAGAAATTTAAGAGTTTTATTAGTTCGTAATGCTCTTTAAAGATATTTTAATTTTTCTTACAGTCGAGCAATGCAAATGGAACCGTGGTCGAAAGATAACACACTTCGTGAAATATGGTAGGTACAAATTAAAACATATTTTTATTTTTGTATATTATCGATCAAACAGTTTCTTCATTTTTTCTTTTATTCCAATTATCTTTTAAAGATTTTAATCTTGTATATATATGAAATTATATTATAATGGTCTTTTATACTACTGATCAAATGTTTTTAACAATGCTCCTAACGAAAGACTTTGCTCTTTCTTATAGTCCAACAATGGAGACTGAAGCACCCGAACAAAATTATTTAACTGGAGATGAAGATGCATTATTATTTGCAAGGGAGCTCGAGATGTCACTTGAACAACAATGAAACGACGTGACACCTTCATATATGTATGCAAGTTTAATTTGCTATCCACAAACATTTCAATTCGTAATTTTTTTTTTATCTATCATTTTCACAAATTCATAATTTTGCAGGTACAATGGTTTGCGACATTGATATCATTTCAACTTGGAGCACATATTAGATCATTCTCCATTTGTATTTTTTAGTTTAAGG ATGGGCTATACCTTTTGTCCGACGGACGAAGAATTGTTATGTTATTATCTTTATCACAAAGTAGTTGGGGGTTTCGTACCACCAATTATGTTATCTGTCGTAGACATTTATACAAAAGAACCTCCTCAAATATGGCAACAATGTGGAGGGGTTGATGGTCAGGATGTTCATTTCTTCACTTGTCTTAAAAAGAAAAAGTCTCGTGTTGTGAGGAAAGTTGGTCCCAATGGAGCCACATGGAGTGGTGAAAGCAAAGCAACCAAAGTGTTTTCTCATAATAATACTTTGGTTGGTGATTTTAAACGGTTTCATTATGAAAATCCTAAAATGAAGAAGGGTGGTCATCATAACAATAATTACTCATGGATCATGTATGAGTACACTCTTCACCCTAATCTTGTACCTGAAGGAGTTGTACACGACTCTTTTGTACTGTGTATGCTTCGAAAGAAGATCTTGAAACAAGATAAAAGAGCATTCTCTGCAATAAAACAAACATCATCTTGTCTTGATTGGCCAAACACGACGAAAGCAACAACAACGCAATTGGAAGTACACATTGATGATCTGAATACTAAACGCAGAAGAGTGGAAGAACAAATTTGCATTGATAGGGTTGAAGACGATTGTTTCATCAATATCGAACGATTTGGTGAACAACTTTTGAACGGATACAATTTGGAAGAACCACCCCAACTTCTTCCAGAGAGTCGAGCAATGCAAATGGAACCGTGGTCGAAAGATAACACACTTCGTGAAATATGTCCAACAATGGAGACTGAAGCACCCGAACAAAATTATTTAACTGGAGATGAAGATGCATTATTATTTGCAAGGGAGCTCGAGATGTCACTTGAACAACAATGA ATGGGCTATACCTTTTGTCCGACGGACGAAGAATTGTTATGTTATTATCTTTATCACAAAGTAGTTGGGGGTTTCGTACCACCAATTATGTTATCTGTCGTAGACATTTATACAAAAGAACCTCCTCAAATATGGCAACAATGTGGAGGGGTTGATGGTCAGGATGTTCATTTCTTCACTTGTCTTAAAAAGAAAAAGTCTCGTGTTGTGAGGAAAGTTGGTCCCAATGGAGCCACATGGAGTGGTGAAAGCAAAGCAACCAAAGTGTTTTCTCATAATAATACTTTGGTTGGTGATTTTAAACGGTTTCATTATGAAAATCCTAAAATGAAGAAGGGTGGTCATCATAACAATAATTACTCATGGATCATGTATGAGTACACTCTTCACCCTAATCTTGTACCTGAAGGAGTTGTACACGACTCTTTTGTACTGTGTATGCTTCGAAAGAAGATCTTGAAACAAGATAAAAGAGCATTCTCTGCAATAAAACAAACATCATCTTGTCTTGATTGGCCAAACACGACGAAAGCAACAACAACGCAATTGGAAGTACACATTGATGATCTGAATACTAAACGCAGAAGAGTGGAAGAACAAATTTGCATTGATAGGGTTGAAGACGATTGTTTCATCAATATCGAACGATTTGGTGAACAACTTTTGAACGGATACAATTTGGAAGAACCACCCCAACTTCTTCCAGAGAGTCGAGCAATGCAAATGGAACCGTGGTCGAAAGATAACACACTTCGTGAAATATGTCCAACAATGGAGACTGAAGCACCCGAACAAAATTATTTAACTGGAGATGAAGATGCATTATTATTTGCAAGGGAGCTCGAGATGTCACTTGAACAACAATGA MGYTFCPTDEELLCYYLYHKVVGGFVPPIMLSVVDIYTKEPPQIWQQCGGVDGQDVHFFTCLKKKKSRVVRKVGPNGATWSGESKATKVFSHNNTLVGDFKRFHYENPKMKKGGHHNNNYSWIMYEYTLHPNLVPEGVVHDSFVLCMLRKKILKQDKRAFSAIKQTSSCLDWPNTTKATTTQLEVHIDDLNTKRRRVEEQICIDRVEDDCFINIERFGEQLLNGYNLEEPPQLLPESRAMQMEPWSKDNTLREICPTMETEAPEQNYLTGDEDALLFARELEMSLEQQ
BLAST of CsaV3_1G027970 vs. NCBI nr
Match: KGN65107.1 (hypothetical protein Csa_1G224380 [Cucumis sativus]) HSP 1 Score: 600.9 bits (1548), Expect = 2.3e-168 Identity = 286/288 (99.31%), Postives = 286/288 (99.31%), Query Frame = 0
BLAST of CsaV3_1G027970 vs. NCBI nr
Match: KGN56256.1 (hypothetical protein Csa_3G110040 [Cucumis sativus]) HSP 1 Score: 358.6 bits (919), Expect = 2.0e-95 Identity = 170/195 (87.18%), Postives = 174/195 (89.23%), Query Frame = 0
BLAST of CsaV3_1G027970 vs. NCBI nr
Match: XP_011660358.1 (PREDICTED: uncharacterized protein LOC105436381 [Cucumis sativus]) HSP 1 Score: 227.6 bits (579), Expect = 5.3e-56 Identity = 107/209 (51.20%), Postives = 153/209 (73.21%), Query Frame = 0
BLAST of CsaV3_1G027970 vs. NCBI nr
Match: XP_008443570.1 (PREDICTED: NAC domain-containing protein 105-like [Cucumis melo]) HSP 1 Score: 226.9 bits (577), Expect = 9.0e-56 Identity = 126/289 (43.60%), Postives = 176/289 (60.90%), Query Frame = 0
BLAST of CsaV3_1G027970 vs. NCBI nr
Match: XP_022934631.1 (NAC domain-containing protein 12-like [Cucurbita moschata]) HSP 1 Score: 205.7 bits (522), Expect = 2.1e-49 Identity = 100/186 (53.76%), Postives = 129/186 (69.35%), Query Frame = 0
BLAST of CsaV3_1G027970 vs. TAIR10
Match: AT5G64060.1 (NAC domain containing protein 103) HSP 1 Score: 69.7 bits (169), Expect = 3.3e-12 Identity = 50/154 (32.47%), Postives = 76/154 (49.35%), Query Frame = 0
BLAST of CsaV3_1G027970 vs. TAIR10
Match: AT5G09330.1 (NAC domain containing protein 82) HSP 1 Score: 67.8 bits (164), Expect = 1.3e-11 Identity = 52/156 (33.33%), Postives = 77/156 (49.36%), Query Frame = 0
BLAST of CsaV3_1G027970 vs. TAIR10
Match: AT5G46590.1 (NAC domain containing protein 96) HSP 1 Score: 63.2 bits (152), Expect = 3.1e-10 Identity = 43/154 (27.92%), Postives = 73/154 (47.40%), Query Frame = 0
BLAST of CsaV3_1G027970 vs. TAIR10
Match: AT5G04410.1 (NAC domain containing protein 2) HSP 1 Score: 62.8 bits (151), Expect = 4.1e-10 Identity = 51/156 (32.69%), Postives = 76/156 (48.72%), Query Frame = 0
BLAST of CsaV3_1G027970 vs. TAIR10
Match: AT5G62380.1 (NAC-domain protein 101) HSP 1 Score: 62.8 bits (151), Expect = 4.1e-10 Identity = 55/158 (34.81%), Postives = 73/158 (46.20%), Query Frame = 0
BLAST of CsaV3_1G027970 vs. Swiss-Prot
Match: sp|Q9FY82|NAC82_ARATH (NAC domain-containing protein 82 OS=Arabidopsis thaliana OX=3702 GN=NAC082 PE=1 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 2.3e-10 Identity = 52/156 (33.33%), Postives = 77/156 (49.36%), Query Frame = 0
BLAST of CsaV3_1G027970 vs. Swiss-Prot
Match: sp|Q9LS24|NAC96_ARATH (NAC domain-containing protein 96 OS=Arabidopsis thaliana OX=3702 GN=NAC096 PE=1 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 5.6e-09 Identity = 43/154 (27.92%), Postives = 73/154 (47.40%), Query Frame = 0
BLAST of CsaV3_1G027970 vs. Swiss-Prot
Match: sp|Q84K00|NAC78_ARATH (NAC domain-containing protein 78 OS=Arabidopsis thaliana OX=3702 GN=NAC078 PE=2 SV=2) HSP 1 Score: 62.8 bits (151), Expect = 7.3e-09 Identity = 51/156 (32.69%), Postives = 76/156 (48.72%), Query Frame = 0
BLAST of CsaV3_1G027970 vs. Swiss-Prot
Match: sp|Q9LVA1|NC101_ARATH (NAC domain-containing protein 101 OS=Arabidopsis thaliana OX=3702 GN=NAC101 PE=2 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 7.3e-09 Identity = 55/158 (34.81%), Postives = 73/158 (46.20%), Query Frame = 0
BLAST of CsaV3_1G027970 vs. Swiss-Prot
Match: sp|Q949N0|NAC53_ARATH (NAC domain-containing protein 53 OS=Arabidopsis thaliana OX=3702 GN=NAC053 PE=2 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 2.1e-08 Identity = 50/156 (32.05%), Postives = 75/156 (48.08%), Query Frame = 0
BLAST of CsaV3_1G027970 vs. TrEMBL
Match: tr|A0A0A0LWA5|A0A0A0LWA5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G224380 PE=4 SV=1) HSP 1 Score: 600.9 bits (1548), Expect = 1.5e-168 Identity = 286/288 (99.31%), Postives = 286/288 (99.31%), Query Frame = 0
BLAST of CsaV3_1G027970 vs. TrEMBL
Match: tr|A0A0A0L807|A0A0A0L807_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110040 PE=4 SV=1) HSP 1 Score: 358.6 bits (919), Expect = 1.3e-95 Identity = 170/195 (87.18%), Postives = 174/195 (89.23%), Query Frame = 0
BLAST of CsaV3_1G027970 vs. TrEMBL
Match: tr|A0A1S3B8F1|A0A1S3B8F1_CUCME (NAC domain-containing protein 105-like OS=Cucumis melo OX=3656 GN=LOC103487127 PE=4 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 5.9e-56 Identity = 126/289 (43.60%), Postives = 176/289 (60.90%), Query Frame = 0
BLAST of CsaV3_1G027970 vs. TrEMBL
Match: tr|V4S8B0|V4S8B0_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v10013622mg PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 7.3e-22 Identity = 67/168 (39.88%), Postives = 98/168 (58.33%), Query Frame = 0
BLAST of CsaV3_1G027970 vs. TrEMBL
Match: tr|M5X6G9|M5X6G9_PRUPE (NAC68 OS=Prunus persica OX=3760 GN=PRUPE_4G230900 PE=2 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 2.1e-21 Identity = 70/161 (43.48%), Postives = 94/161 (58.39%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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