CsaV3_1G017070 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G017070
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Pentatricopeptide repeat-containing protein
Location	chr1 : 11597993 .. 11605381 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCCTCTCATTTCTCAAGAACTAGTAAGATTGGAGTTTTGGGTTCTTTTTATTTCTTGTTTATTTCTTGTTCTCTGACTTTTGCTTTCTGCGAGTCTGGCTTTTGGTTGATATTGGGAGGGAAAGATTGTTGTTGGTTTCAAATGGAGTAATTGATTTATGGAAATATCTTTTGATTTTGTGCTCGATTTTGGGTGTGAACTTTCTGTCCCCTTTATTGATTGTGCTGTTCTACTCCAACCTTATTATGATTTACGGGTTTCGGTGCCATTCTCAGGACTCCTCTTTATTTTCTTTTACTTTTTTTGTCTCTCATATATTCTTGAATTCGATTTCTTCATTGTAGATAGGGGAGAGTTGCATCTTTAGGTGGAATTTGACTTCCTGAAGGATCCAAATTTCAGAAGGTAATTTCTAAGCTAGTCTGGTTTTATAGAGTTCTATTGGGGCTTGGCCGATGGCTTTTTATCCAAAGGAGTACTTGAGGATTATCTTTTCAAGACTGTTTTAGTTGGAGATTTAGCTTGCGGAGTAATTGAGACTTTTTTTTTTCAAGATTTGCTAGAGACTACCCTAATTTGAAGTCAACCACCTGAACTATCTTTTATTAATGTTTAGTTCTTTCAGAAACATTGTTAAACGGACCAAAAGTCTTAGTTCATCGGAGTCTAAGATCATTATTCTTTTTGAGAATTCTTGCAAAGCAAGCTTTTTAGCTGGGAATATTGGAGATGGTAGTGATCCAATCAAGATGAATGTTGAATCAGAACCTGCAACTGAATGGGAGAGTTTACTTGAACCTTTTGATCTCACAAAGCTTAGGAAGTCTCACATTCTAATTACTCCTGTTCAACTTTGTAAACTGCTTGAGCTCCCACTTGATGTTCCCACATTGTTGGAAATATTTGAACGGGTGGGTGGCCAGAAGGGCTATTGCCATACATTTGATGTATACTATGTGTTTATAAATAAGCTTGGGGCAATTGGAAAGTTCAAGCTTATAGATAAACTTTTAATGCAGATGAAAGAAGAAGGGATTGTTTTTCGAGAGTCCATTTTCATGATAATTATGAAACATTATGGAAAAGCTGGACAACCTGGACAAGCAATTAGATTGCTCCTAGATATGAGGGCTGTCTATTTATGTGAACCAACTTTCAAATCTTATGATTTAGTTTTGGAAATACTTGTGACCGGTAATTGCCCACAAGTTGCTACAAATGTTTTCTATGACATGTTGAGTAAGGGTGTCTCTCCCACTGTTTTTACTTTTGGCATTGTGATGAAAGCTCTCTGTATGTTTAATGAGGTTGATTCTGCATGCTCACTCCTTAGAGATATGACAAAGCATGGATGTGTACCCAATTCTATTGTTTATCAAACTTTAATACATGCACTATCCCAAAAAAACCAAGTTAGTGAAGCCTTAAAGCTTTTGGAAGAAATGTTTGTTATGGGATGCATGCCTGATGTTCAAACTTTCAATGATGTTATTCATGGCCTCTGCAAGGTTAATAAAATTCATGATGCAACAAAATTGGTTGATCGAATGCTTCTTCGAGGTTTTTACCCAGACAATATGACGTATGGTTTTCTGTTGCATGGTCTATGTAGGATTGGAAAACTCAATGAAGCAAGAAAAATATTGATCAAAATCCCTTGTCCAAACAATGCAATCCTCAATACTTTAATCAATGGGTACGTTATGAGTGGACAGCTTAAGGAAGCTCAAAGTTTTCTTAATGAGACTATGATAAATTTTGGTTTTCAGCCTGATATTTTTACATACAACATCTTGATGCATGGTCTCTGCAAAGAGGGGAGTCTTAGTTTTGCTCGTGATTTGGTCAATGAGATGTCGAGGAGGGGTTGTGAGCCGAATGTGATCACATACGCGATACTGGTTAATGGGCTTTGTAAAGCAGGGCTTCTTGAAGAAGCTGGACTTGTTTTACATGAGATGTCAGCAAGGGGATTGACTATAAATTCAGTTATATACAATTGCTTGATATGTGCTCTATGTAGGAAAGAGAAGGTTCATGTTGCTTTAAATCTGTTGAGTGAAATGTGCACGAAAGGGTGCAAGCCTGACTTGTTTACGTATAATTCTCTAATCTATGGATTGTGCAAGGTTGATAGGATTGATGAGGCCTTCAGGTTGTTTCATAATATGTTATTGGATGGTGCAGTTGCCAACAATGTGACTTACAATACACTGATTCATGCACTTTTAAGGAGGGGTGCATTCCAAAAAGCACTCACACTTGTTAATGATATGTTATTTAGAGGATGCACTCTTGATAAGATTACTTACAATGGTCTGATTAAAGCATTTTGCAAAGTTGGTAATATTGAAAAAGGATTGGAACTATATGAGCAAATGATAATGGATGGACTTGGTGCTGATACTATATCGTGTAATATTATGATCAATGGGCTCTGTAAAGTTGGAAAAGTGGACAACGCATTTGAATTTCTAAGAGATGCAATCAATCGAGGTTTTGTGCCTGACATAGTTACTTATAACAGTGTTTTAAATGGACTTTGTAAGGTTGGACGCATCAAGGAAGCTTTAAATCTATTTGATAGATTACAAGTTGAAGGTGTTCGCCCCGATGCTTTTACCTATAACACTTTTATCAGTTGGCAGTGTAAAGAAGGCATGGTGAATGATGCTTGTTTATTTTTTTATAGAGGCATAGAAAATGGTTTTGTACCCAGTAATCTTACTTGGAATGTGTTGGTCTATACTTTGTTAAAACAAAGTAACCAGGAGAATAATTTTTTTGTGTTAGACGAGTTATGGTGATAAGATGTACTTGTGAAATAATTTTTCACTTTAGATATTTCAGTTTCTTCTTGTGAAGCATACATTTTGCAGAAATTTTAAAAATGTTAGTAGTTTAGCGAATTGGTGGCACCCTGAGAAACAAAATGGAGAATCATGAGGCTTAATTTCTTGTCGCTTGATTGAATAAGTTTTGTGCATGTTCATACCTCATTCAAATAGGCTTGATTGAGTTTCTTACTTCACTGTTTTGCTCATGTGCTGGTTCGTTTGCATATATTATGGTTTGATAAGTTAATGTGTTTACTTGGTGTGGTTACTTTTGTTTACCTTTTTTTTTCTTTTTTAAATGCAAGAAACAACAGAAACTTTTCAACACAAAGCTCTTCTGATTAACAGAAAGATTAGAATTGCACCTTGAGCACCAATCATTACATTTTTACATGATCTTGAAGAGGATTTGCGACATAGATTCTTCTATTTATTTTCCACTTCAATTACCATAACAAGAAAAAACTATTCTTAAATGATCACAAGATCTTCCCCTCCTTTTAAAAAATGATAACTAAGAACATAAAGGATGTGGGTGATACTATTGGTTGGAAAAGCTATTGAAAGGAAAGGGGGATTCTTTTCTCACATGTTGCCACAAAAAACGAGCAAGTAGGGGAAAAATCTGATATTGTGGTTGTGCTTTGTTGTCTTCTTTGCTCAATTGCTTATTGATTCATAATGAGAGATCTCCTTAAAAACCCTGACTCGATGCCACATGAAATTGTGTAAATTAATATCTGTGGTTTGGTTGTAAAGAGACTGCAATTGTCGCAAGTTGTTTATCATTTATTTATTTATTTTTTATTATTTTCTTTGCTTTTGTGCATATGGCAACGTTTCACTTGAGCAAGTCATTCTTTGCTGATGTGAAAATCTTTGTTGTTTCGACTCTCTAAAACCACTTTCCAAGTTGATATTCATTATCAAGAGTCAGCCTAGTGCCTTCTATCAACTTAGACTGCAGAAAATAATAATTATAAATTTTTCTTATCTATGTTGGGTGATATTCGTTATATTTTCAGTTTATATTGGTTTATGGATGATAAAATTGGGTTGGTGGTCCACTGGCCACGTGCAAATGTATCACAGAATTGAATTTGAACTTGCTTGGAGCTAGTATCAATATACGTAGATTGGTCCATCGGATGATGTGCAATATACTTAGCATCAGCATAATTTAATTATTTAAAAATGTTGTGATGCAGTTACTCATCTGTCCTAGAAATTGGATGGTTGATACACCTGGCTACTTAGCATCATGATGTTGATTATTAAAGGCATTACCGTTTCTGTGTCTATACTTTTATGAAAATGATTATTTTGACAATTATCATCCTTATCGTCATCTAGTTTCTTAGTGTAATACCTTTCATTATTGTATTACTGTTTGTTATCAAATGTTCAGAGTTGTAATTTGCTTCTGTTAAAATGTTGCAACAATTTACTGTGCATACTTTCTTCTCACGCTATCTTCCGAAAGAAATAGCAGCACCCATCAAAATTATTTCCTCTCCTACGTCTTTAGATTTTTTGGTTAATTGTACTTTTGTTTTAGATATAAATTTCTCCGTACATTTGTTTTGGTTCTTGGAATGGCCAGGCTGGGTTCGATATTGAGAAAGCACCAGAATTTTTTACTCGATCTGTTGAAGCTAAGGCGGATTGACACAAGATTATATTCTATTTCCCTTTTTGTTTCCTTCTCACTTCACCAGCTATTAGCTTCAGAATATTGGTACTCTCAGATTCTTTCCTTACTCCATCAAGTAAGTACTCACACAATATCTCTGGCATATTTTATACCTTTCCTTCCTTTCAAGTTTCCTCTGTCTCTTATATTCCTGAATTCTATTTCTTTGATTCTGAGTAGGGAAGAATTGCATCCTTAGGTGGAATCGACTTGCTGAAGGACCCAGAATTCAGAAGGTATTTTGAAACTATTATGGTTCTATAGAGTTCTGTGAGGCTTGGGCAATGGCTTTTTATTCCGAGGAGGAAAAAACTGAAGATTATCTTTTCAAGATTGTTTTAATTGGTGATTCAGCCGTGGGAAAATCAAATTTGCTCGCTAGATTTGCTAGAGATGAATTTTACCCTAATTCCAAGTCAACCATTGGAGTGGAGTTCCAGACCCAAAAGATAGAAATAAATGGAAAGGAAATCAAAGCTCAGATATGGGATACAGCTGGTCAAGAGCGATTTAGGGCCGTTACATCTGCATATTATAGAGGAGCTGTTGGAGCTCTCCTCGTATATGACATTAGTAGGCGTCAGACCTTTGACAGCATTGGAAGATGGCTGAATGAACTTCACAGTGAGTATTACAAAGATGTTATCTGATGTTTCTTGATAATAAAATCTCCAATACTAAATTGTCATGCCTTTTTATTTGATTCTTGTTCAAGTTATTGAACTGGTTTACTTCTCATTATTCTGTCATTTGTATTACCGTTTCCTTTTTGTGAATGTGGTGTAGATAGTATCTTATGATGAAAAAAATTAAGAAACAGTAATTTCCTTTCTGCATGAGTGTTGGAACTTTTAGAAGGCTTCAAAGATTTTTATTCTATAATTTGCCTTCACCAGATCGTATTCTGGAAACAGTAGAATTTTCAACAAGGAAGAAAGTCTTAAGTAATGAAGGGTCATAAGTTCGAATTTCCTCGAGAGCTGCATCTGAATTGGAAATGTAAAACAAAAGGAGAAAAAAACATTATGTAAAGTTTCTTGGTTGTAACTATATCGTTACAGTGTTGAGTGAACACTGTTAAAGGCTCAAGCATTTGCCAATTTTTTTGTTTGATGTTTCTCTATGCCTAACTTCTTGGATCAGTTTATCTCTTAGTTTCTTAAGGGACTCTCTCTAAGTTTCTTGTGGTTCTCAGTTGAAGGGTTTCATCTTTTTGGCCTGTGTTCTTCGGTTGTTGGGTTTGTCTCCTTTTTTTTCTTTTTTTTTTTTGTATTTGAAGATGTATTTTGGAGCAATATTTTCTTTTTATCATATAATTTTTTTGGGGAAAAATGCCTTTTTGGTCTAGTTTTTATTTAGACCCTAAATATTAAAATGTTATGCATTTAGTCCTTAGATTTTGATTTTGGTTTCAGTTTAGTTCCTAAGTATCAAAATTACAATTTGAAACCTAGCCACCTAGGGGACTAAATTGAAATCAAACTCAAATCTTAGGATTAAATAGTAACATCACTCAAATCTTATGATTAAATACGTAACCTCACTGATATCTTATGATTAAATATGTAACATTTTGAAACCTAGGGATTAACTAGAAGTTAGACCCAAAACTCAGAAACTAAAAGACATTTTCCCCAAATTTTTGTTCTTTTTTGTTTTCCTTTAAATTAAAAGGGCTCAAGAAATAGGTTGCATCTGTGCCTTTTTTTATGACCTAAAAGGACTGATTGGGTAAATCTTTGATTGAACAGCTCATTCTGACATGAACGTAGTAACCATACTGGTTGGCAACAAGTCTGATCTCAAGGATGCTAGAGAAGTACCAACTGCTGAAGGCAAGTCTTTGGCAGAAGCTCAGGGTCTGTTTTTTATAGAAACCTCAGCCCTCGATTCTTCGAATGTGACAAACGCATTTCAGACAGTCGTGAAAGAGATCTACAACATATTGAGCCGAAAAGTAATGATATCTCAAGAGCTTAAGAAGCAGGATGTGAGCTGGATGGAGAATGGAAAGACTACTGTAGTTATACAGGGAGAGGACCAAGTAGAAGGAGAGCCCAAAAAAGGTGGGTGCTGCTCATCCTAGTAATTTACATATTGGAATCTGTTCTTTCATTTATTCTGCTCATTATATAGCATCATTTGCTTAACAACTTCCACATGTATCTTCTTCTCCATCTTGTTGAGTTTTCTTCAGTCGATGAATCTGCTCTCTCTATGTTTTTTCTTCTGCAATTCTGGGTAACATTTGATTTGATGCGTTCTCGCATGACTGATGGATTAGAGAAACATGGGGGGAATTGAAAAATGTAAATGTGACCTGAAAGGGTTTAATTTTCAAAAGTAATATTTTTTACCTCTGTTCAAATTTATGCTCAAAATCCTGTCTGAGCTTCTAAAGAATATCATTCCAACATCATCATTGTATGGTTCATTATTCTCAAACTTTTATCTTATGTCGTCCTCTGAAGAATATTCATTGTAGTACTTGAAAGCAAG

mRNA sequence

ATGTTTAGTTCTTTCAGAAACATTGTTAAACGGACCAAAAGTCTTAGTTCATCGGAGTCTAAGATCATTATTCTTTTTGAGAATTCTTGCAAAGCAAGCTTTTTAGCTGGGAATATTGGAGATGGTAGTGATCCAATCAAGATGAATGTTGAATCAGAACCTGCAACTGAATGGGAGAGTTTACTTGAACCTTTTGATCTCACAAAGCTTAGGAAGTCTCACATTCTAATTACTCCTGTTCAACTTTGTAAACTGCTTGAGCTCCCACTTGATGTTCCCACATTGTTGGAAATATTTGAACGGGTGGGTGGCCAGAAGGGCTATTGCCATACATTTGATGTATACTATGTGTTTATAAATAAGCTTGGGGCAATTGGAAAGTTCAAGCTTATAGATAAACTTTTAATGCAGATGAAAGAAGAAGGGATTGTTTTTCGAGAGTCCATTTTCATGATAATTATGAAACATTATGGAAAAGCTGGACAACCTGGACAAGCAATTAGATTGCTCCTAGATATGAGGGCTGTCTATTTATGTGAACCAACTTTCAAATCTTATGATTTAGTTTTGGAAATACTTGTGACCGGTAATTGCCCACAAGTTGCTACAAATGTTTTCTATGACATGTTGAGTAAGGGTGTCTCTCCCACTGTTTTTACTTTTGGCATTGTGATGAAAGCTCTCTGTATGTTTAATGAGGTTGATTCTGCATGCTCACTCCTTAGAGATATGACAAAGCATGGATGTGTACCCAATTCTATTGTTTATCAAACTTTAATACATGCACTATCCCAAAAAAACCAAGTTAGTGAAGCCTTAAAGCTTTTGGAAGAAATGTTTGTTATGGGATGCATGCCTGATGTTCAAACTTTCAATGATGTTATTCATGGCCTCTGCAAGGTTAATAAAATTCATGATGCAACAAAATTGGTTGATCGAATGCTTCTTCGAGGTTTTTACCCAGACAATATGACGTATGGTTTTCTGTTGCATGGTCTATGTAGGATTGGAAAACTCAATGAAGCAAGAAAAATATTGATCAAAATCCCTTGTCCAAACAATGCAATCCTCAATACTTTAATCAATGGGTACGTTATGAGTGGACAGCTTAAGGAAGCTCAAAGTTTTCTTAATGAGACTATGATAAATTTTGGTTTTCAGCCTGATATTTTTACATACAACATCTTGATGCATGGTCTCTGCAAAGAGGGGAGTCTTAGTTTTGCTCGTGATTTGGTCAATGAGATGTCGAGGAGGGGTTGTGAGCCGAATGTGATCACATACGCGATACTGGTTAATGGGCTTTGTAAAGCAGGGCTTCTTGAAGAAGCTGGACTTGTTTTACATGAGATGTCAGCAAGGGGATTGACTATAAATTCAGTTATATACAATTGCTTGATATGTGCTCTATGTAGGAAAGAGAAGGTTCATGTTGCTTTAAATCTGTTGAGTGAAATGTGCACGAAAGGGTGCAAGCCTGACTTGTTTACGTATAATTCTCTAATCTATGGATTGTGCAAGGTTGATAGGATTGATGAGGCCTTCAGGTTGTTTCATAATATGTTATTGGATGGTGCAGTTGCCAACAATGTGACTTACAATACACTGATTCATGCACTTTTAAGGAGGGGTGCATTCCAAAAAGCACTCACACTTGTTAATGATATGTTATTTAGAGGATGCACTCTTGATAAGATTACTTACAATGGTCTGATTAAAGCATTTTGCAAAGTTGGTAATATTGAAAAAGGATTGGAACTATATGAGCAAATGATAATGGATGGACTTGGTGCTGATACTATATCGTGTAATATTATGATCAATGGGCTCTGTAAAGTTGGAAAAGTGGACAACGCATTTGAATTTCTAAGAGATGCAATCAATCGAGGTTTTGTGCCTGACATAGTTACTTATAACAGTGTTTTAAATGGACTTTGTAAGGTTGGACGCATCAAGGAAGCTTTAAATCTATTTGATAGATTACAAGTTGAAGGTGTTCGCCCCGATGCTTTTACCTATAACACTTTTATCAGTTGGCAGTGTAAAGAAGGCATGGTGAATGATGCTTGTTTATTTTTTTATAGAGGCATAGAAAATGGTTTTGTACCCAGTAATCTTACTTGGAATGTGTTGGTCTATACTTTGTTAAAACAAAGTAACCAGGAGAATAATTTTTTTGTGTTAGACGAGTTATGGTGA

Coding sequence (CDS)

ATGTTTAGTTCTTTCAGAAACATTGTTAAACGGACCAAAAGTCTTAGTTCATCGGAGTCTAAGATCATTATTCTTTTTGAGAATTCTTGCAAAGCAAGCTTTTTAGCTGGGAATATTGGAGATGGTAGTGATCCAATCAAGATGAATGTTGAATCAGAACCTGCAACTGAATGGGAGAGTTTACTTGAACCTTTTGATCTCACAAAGCTTAGGAAGTCTCACATTCTAATTACTCCTGTTCAACTTTGTAAACTGCTTGAGCTCCCACTTGATGTTCCCACATTGTTGGAAATATTTGAACGGGTGGGTGGCCAGAAGGGCTATTGCCATACATTTGATGTATACTATGTGTTTATAAATAAGCTTGGGGCAATTGGAAAGTTCAAGCTTATAGATAAACTTTTAATGCAGATGAAAGAAGAAGGGATTGTTTTTCGAGAGTCCATTTTCATGATAATTATGAAACATTATGGAAAAGCTGGACAACCTGGACAAGCAATTAGATTGCTCCTAGATATGAGGGCTGTCTATTTATGTGAACCAACTTTCAAATCTTATGATTTAGTTTTGGAAATACTTGTGACCGGTAATTGCCCACAAGTTGCTACAAATGTTTTCTATGACATGTTGAGTAAGGGTGTCTCTCCCACTGTTTTTACTTTTGGCATTGTGATGAAAGCTCTCTGTATGTTTAATGAGGTTGATTCTGCATGCTCACTCCTTAGAGATATGACAAAGCATGGATGTGTACCCAATTCTATTGTTTATCAAACTTTAATACATGCACTATCCCAAAAAAACCAAGTTAGTGAAGCCTTAAAGCTTTTGGAAGAAATGTTTGTTATGGGATGCATGCCTGATGTTCAAACTTTCAATGATGTTATTCATGGCCTCTGCAAGGTTAATAAAATTCATGATGCAACAAAATTGGTTGATCGAATGCTTCTTCGAGGTTTTTACCCAGACAATATGACGTATGGTTTTCTGTTGCATGGTCTATGTAGGATTGGAAAACTCAATGAAGCAAGAAAAATATTGATCAAAATCCCTTGTCCAAACAATGCAATCCTCAATACTTTAATCAATGGGTACGTTATGAGTGGACAGCTTAAGGAAGCTCAAAGTTTTCTTAATGAGACTATGATAAATTTTGGTTTTCAGCCTGATATTTTTACATACAACATCTTGATGCATGGTCTCTGCAAAGAGGGGAGTCTTAGTTTTGCTCGTGATTTGGTCAATGAGATGTCGAGGAGGGGTTGTGAGCCGAATGTGATCACATACGCGATACTGGTTAATGGGCTTTGTAAAGCAGGGCTTCTTGAAGAAGCTGGACTTGTTTTACATGAGATGTCAGCAAGGGGATTGACTATAAATTCAGTTATATACAATTGCTTGATATGTGCTCTATGTAGGAAAGAGAAGGTTCATGTTGCTTTAAATCTGTTGAGTGAAATGTGCACGAAAGGGTGCAAGCCTGACTTGTTTACGTATAATTCTCTAATCTATGGATTGTGCAAGGTTGATAGGATTGATGAGGCCTTCAGGTTGTTTCATAATATGTTATTGGATGGTGCAGTTGCCAACAATGTGACTTACAATACACTGATTCATGCACTTTTAAGGAGGGGTGCATTCCAAAAAGCACTCACACTTGTTAATGATATGTTATTTAGAGGATGCACTCTTGATAAGATTACTTACAATGGTCTGATTAAAGCATTTTGCAAAGTTGGTAATATTGAAAAAGGATTGGAACTATATGAGCAAATGATAATGGATGGACTTGGTGCTGATACTATATCGTGTAATATTATGATCAATGGGCTCTGTAAAGTTGGAAAAGTGGACAACGCATTTGAATTTCTAAGAGATGCAATCAATCGAGGTTTTGTGCCTGACATAGTTACTTATAACAGTGTTTTAAATGGACTTTGTAAGGTTGGACGCATCAAGGAAGCTTTAAATCTATTTGATAGATTACAAGTTGAAGGTGTTCGCCCCGATGCTTTTACCTATAACACTTTTATCAGTTGGCAGTGTAAAGAAGGCATGGTGAATGATGCTTGTTTATTTTTTTATAGAGGCATAGAAAATGGTTTTGTACCCAGTAATCTTACTTGGAATGTGTTGGTCTATACTTTGTTAAAACAAAGTAACCAGGAGAATAATTTTTTTGTGTTAGACGAGTTATGGTGA

Protein sequence

MFSSFRNIVKRTKSLSSSESKIIILFENSCKASFLAGNIGDGSDPIKMNVESEPATEWESLLEPFDLTKLRKSHILITPVQLCKLLELPLDVPTLLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDELW

Homology

[Close]

BLAST of CsaV3_1G017070 vs. NCBI nr
Match: XP_004139614.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g64320, mitochondrial [Cucumis sativus])

HSP 1 Score: 514.6 bits (1324), Expect = 5.5e-142
Identity = 415/415 (100.00%), Postives = 415/415 (100.00%), Query Frame = 0


Query: 1   MFSSFRNIVKRTKSLSSSESKIIILFENSCKASFLAGNIGDGSDPIKMNVESEPATEWES 60
           MFSSFRNIVKRTKSLSSSESKIIILFENSCKASFLAGNIGDGSDPIKMNVESEPATEWES
Sbjct: 1   MFSSFRNIVKRTKSLSSSESKIIILFENSCKASFLAGNIGDGSDPIKMNVESEPATEWES 60

Query: 61  LLEPFDLTKLRKSHILITPVQLCKLLELPLDVPTLLEIFERVGGQKGYCHTFDVYYVFIN 120
           LLEPFDLTKLRKSHILITPVQLCKLLELPLDVPTLLEIFERVGGQKGYCHTFDVYYVFIN
Sbjct: 61  LLEPFDLTKLRKSHILITPVQLCKLLELPLDVPTLLEIFERVGGQKGYCHTFDVYYVFIN 120

Query: 121 KLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCE 180
           KLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCE
Sbjct: 121 KLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCE 180

Query: 181 PTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           PTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 PTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIPCPNNAILNTL 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIPCPNNAILNTL
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIPCPNNAILNTL 360

Query: 361 INGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNE 416
           INGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNE
Sbjct: 361 INGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNE 415

[Close]

BLAST of CsaV3_1G017070 vs. NCBI nr
Match: XP_008463614.1 (PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like [Cucumis melo])

HSP 1 Score: 476.9 bits (1226), Expect = 1.3e-130
Identity = 393/415 (94.70%), Postives = 403/415 (97.11%), Query Frame = 0


Query: 1   MFSSFRNIVKRTKSLSSSESKIIILFENSCKASFLAGNIGDGSDPIKMNVESEPATEWES 60
           MFSSFRNIVKRTKSLSS ESKIIILFENSCKASFLAGNIGDGSD  KM+VE E  TEWES
Sbjct: 1   MFSSFRNIVKRTKSLSSLESKIIILFENSCKASFLAGNIGDGSDATKMSVEPELETEWES 60

Query: 61  LLEPFDLTKLRKSHILITPVQLCKLLELPLDVPTLLEIFERVGGQKGYCHTFDVYYVFIN 120
           LLEPFDLTKLR+S I ITPVQLCKLLELPLDVPTL EIF+RVGGQKGYCHTFDVYYVFIN
Sbjct: 61  LLEPFDLTKLRESRIRITPVQLCKLLELPLDVPTLSEIFDRVGGQKGYCHTFDVYYVFIN 120

Query: 121 KLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCE 180
           KLG +G+FK+IDKLLMQMKEEGIVF+ESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCE
Sbjct: 121 KLGTVGQFKVIDKLLMQMKEEGIVFQESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCE 180

Query: 181 PTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           PTFKSY++VLEILVTGNCPQVATNVFYDMLSKGVXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 PTFKSYNVVLEILVTGNCPQVATNVFYDMLSKGVXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIPCPNNAILNTL 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  KIPCPNNAILNTL
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKKIPCPNNAILNTL 360

Query: 361 INGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNE 416
           INGYVMSGQLKEAQ+FLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNE
Sbjct: 361 INGYVMSGQLKEAQNFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNE 415

[Close]

BLAST of CsaV3_1G017070 vs. NCBI nr
Match: XP_022966667.1 (pentatricopeptide repeat-containing protein At5g64320, mitochondrial [Cucurbita maxima])

HSP 1 Score: 441.0 bits (1133), Expect = 7.7e-120
Identity = 375/416 (90.14%), Postives = 389/416 (93.51%), Query Frame = 0


Query: 1   MFSSFRNIVKRTKSLSSSESKIIILFENSCKASFLAGNIGDGSD-PIKMNVESEPATEWE 60
           M++SF NIVKRTK+L S E  II   ENSCK+SFLAGNIGDGS  P KMN+ESE  TEWE
Sbjct: 1   MYTSFGNIVKRTKNLCSLEPMIINHIENSCKSSFLAGNIGDGSGCPTKMNIESERETEWE 60

Query: 61  SLLEPFDLTKLRKSHILITPVQLCKLLELPLDVPTLLEIFERVGGQKGYCHTFDVYYVFI 120
           SLLEPFDLTKLRKSHILITPVQLCKLLELPLD+PTLLEIFERVG QKGYCHTFDVYYV I
Sbjct: 61  SLLEPFDLTKLRKSHILITPVQLCKLLELPLDMPTLLEIFERVGAQKGYCHTFDVYYVLI 120

Query: 121 NKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLC 180
           NKLG IG+FK+IDKLL QMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVY C
Sbjct: 121 NKLGTIGEFKVIDKLLTQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYSC 180

Query: 181 EPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVXXXXXXXXXXXXXXXXXXXXXXXXX 240
           E TF+SY++VLE LVTGNCP+VATNV+YDMLSKG+   XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 ESTFESYNVVLETLVTGNCPKVATNVYYDMLSKGISPTXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIPCPNNAILNT 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IPCPNNAILNT
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPCPNNAILNT 360

Query: 361 LINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNE 416
           LINGYVMSGQLKEAQSFLNETMINFGF PDIFTYNILMHGLCKEGSL FA DLVNE
Sbjct: 361 LINGYVMSGQLKEAQSFLNETMINFGFDPDIFTYNILMHGLCKEGSLGFAHDLVNE 416

[Close]

BLAST of CsaV3_1G017070 vs. NCBI nr
Match: XP_023541625.1 (pentatricopeptide repeat-containing protein At5g64320, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 438.3 bits (1126), Expect = 5.0e-119
Identity = 376/416 (90.38%), Postives = 392/416 (94.23%), Query Frame = 0


Query: 1   MFSSFRNIVKRTKSLSSSESKIIILFENSCKASFLAGNIGDGSD-PIKMNVESEPATEWE 60
           M++SF NIVKRTK+L S E KII   ENSCK+SFLAGNIGDGS    KMN+ESE  +EWE
Sbjct: 1   MYTSFGNIVKRTKNLCSLEPKIINHIENSCKSSFLAGNIGDGSGCSTKMNIESERESEWE 60

Query: 61  SLLEPFDLTKLRKSHILITPVQLCKLLELPLDVPTLLEIFERVGGQKGYCHTFDVYYVFI 120
           SLLEPFDLTKLRKSHILITPVQLCKLLELPLDVPTLLEIFERVG QK YCHTFDVYYV I
Sbjct: 61  SLLEPFDLTKLRKSHILITPVQLCKLLELPLDVPTLLEIFERVGAQKAYCHTFDVYYVLI 120

Query: 121 NKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLC 180
           NKLG IG+FK+IDKLL QMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVY C
Sbjct: 121 NKLGTIGEFKVIDKLLTQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYSC 180

Query: 181 EPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVXXXXXXXXXXXXXXXXXXXXXXXXX 240
           EPTF+SY++VLE LVTGNCP+VATNV+YDMLSKG+XXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 EPTFESYNVVLETLVTGNCPKVATNVYYDMLSKGIXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIPCPNNAILNT 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +PCPNNAILNT
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPCPNNAILNT 360

Query: 361 LINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNE 416
           LI GYVMSG+LKEAQSFLNETMINFGF PDIFTYNILMHGLCKEGSL FARDLVNE
Sbjct: 361 LIKGYVMSGRLKEAQSFLNETMINFGFDPDIFTYNILMHGLCKEGSLGFARDLVNE 416

[Close]

BLAST of CsaV3_1G017070 vs. NCBI nr
Match: XP_022925312.1 (pentatricopeptide repeat-containing protein At5g64320, mitochondrial [Cucurbita moschata])

HSP 1 Score: 412.1 bits (1058), Expect = 3.8e-111
Identity = 363/416 (87.26%), Postives = 376/416 (90.38%), Query Frame = 0


Query: 1   MFSSFRNIVKRTKSLSSSESKIIILFENSCKASFLAGNIGDGSD-PIKMNVESEPATEWE 60
           M++SF NIVKRTK+L S E KII   ENSCK+SFLAGNIGDGS  P KMN+ESE  TEWE
Sbjct: 1   MYTSFGNIVKRTKNLCSLEPKIINHIENSCKSSFLAGNIGDGSGCPTKMNIESERETEWE 60

Query: 61  SLLEPFDLTKLRKSHILITPVQLCKLLELPLDVPTLLEIFERVGGQKGYCHTFDVYYVFI 120
           SLLEPFDLTKLRKSHILITPVQLCKLLELPLDVPTLLEIFERVG QKGYCHTFDVYYV I
Sbjct: 61  SLLEPFDLTKLRKSHILITPVQLCKLLELPLDVPTLLEIFERVGAQKGYCHTFDVYYVLI 120

Query: 121 NKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLC 180
           NKLG IG+FK+IDKLL QMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVY C
Sbjct: 121 NKLGTIGEFKVIDKLLTQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYSC 180

Query: 181 EPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVXXXXXXXXXXXXXXXXXXXXXXXXX 240
           E TF+SY++VLE LVTGNCP+VATNV+YDMLSKG+   XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 ESTFESYNVVLETLVTGNCPKVATNVYYDMLSKGISPTXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIPCPNNAILNT 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IPCPNNAILNT
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPCPNNAILNT 360

Query: 361 LINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNE 416
           LIN               NETMINFGF PDIFTYNILMHGLCKEGSL FARDLVNE
Sbjct: 361 LINXXXXXXXXXXXXXXXNETMINFGFDPDIFTYNILMHGLCKEGSLGFARDLVNE 416

[Close]

BLAST of CsaV3_1G017070 vs. TAIR10
Match: AT5G64320.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 213.4 bits (542), Expect = 4.7e-55
Identity = 105/163 (64.42%), Postives = 128/163 (78.53%), Query Frame = 0


Query: 52  SEPATEWESLLEPFDLTKLRKSHILITPVQLCKLLELPLDVPTLLEIFERVGGQKGYCHT 111
           ++ A EWE LL+PFDL  LR S   ITP QL KLLELPL+V T +E+F   G Q GY H+
Sbjct: 51  TDSANEWEKLLKPFDLDSLRNSFHKITPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHS 110

Query: 112 FDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLL 171
           FDVY V I KLGA G+FK ID+LL+QMK+EGIVF+ES+F+ IM+ Y KAG PGQ  RL+L
Sbjct: 111 FDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLML 170

Query: 172 DMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGV 215
           +MR VY CEPTFKSY++VLEILV+GNC +VA NVFYDMLS+ +
Sbjct: 171 EMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKI 213

[Close]

BLAST of CsaV3_1G017070 vs. TAIR10
Match: AT5G46100.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 67.0 bits (162), Expect = 5.5e-11
Identity = 42/140 (30.00%), Postives = 72/140 (51.43%), Query Frame = 0


Query: 77  ITPVQLCKLLELPLDVPTLLEIFERVGGQ--KGYCHTFDVYYVFINKLGAIGKFKLIDKL 136
           ITP Q+ KL+    DV   + +F+    +   GY H    +   + +L +  KFK  + L
Sbjct: 14  ITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDL 73

Query: 137 LMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILV 196
           +++MK E  V  E I + I + YG+  +P  ++R+   M+  + C+P+ K+Y  VL ILV
Sbjct: 74  IVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKD-FDCDPSQKAYVTVLAILV 133

Query: 197 TGNCPQVATNVFYDMLSKGV 215
             N   +A   + +M   G+
Sbjct: 134 EENQLNLAFKFYKNMREIGL 152

[Close]

BLAST of CsaV3_1G017070 vs. TAIR10
Match: AT1G74580.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 66.2 bits (160), Expect = 9.3e-11
Identity = 36/119 (30.25%), Postives = 66/119 (55.46%), Query Frame = 0


Query: 77  ITPVQLCKLLELPLDVPTLLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLM 136
           + P  +  +++   D    LE+F  +  + G+ HT   Y   I KLG  GKF+ ++++L+
Sbjct: 5   LLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLV 64

Query: 137 QMKEE-GIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILV 195
            M+E  G    E +++  MK+YG+ G+  +A+  + +    Y CEPT  SY+ ++ +LV
Sbjct: 65  DMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVN-VFERMDFYDCEPTVFSYNAIMSVLV 122

[Close]

BLAST of CsaV3_1G017070 vs. TAIR10
Match: AT3G09060.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 56.6 bits (135), Expect = 7.4e-08
Identity = 28/118 (23.73%), Postives = 57/118 (48.31%), Query Frame = 0


Query: 77  ITPVQLCKLLELPLDVPTLLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLM 136
           ++P  + KLL+   +      +F+      GY H+  VY+  + +L        + +++ 
Sbjct: 8   LSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVE 67

Query: 137 QMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILV 195
            ++ +     E + + ++K YGK   P QA+ +   MR ++ CEP  +SY+ +L   V
Sbjct: 68  LIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFV 125

[Close]

BLAST of CsaV3_1G017070 vs. TAIR10
Match: AT5G18475.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 56.6 bits (135), Expect = 7.4e-08
Identity = 34/136 (25.00%), Postives = 66/136 (48.53%), Query Frame = 0


Query: 59  ESLLEPFDLTKLRKSHILITPVQLCKLLELPLDVPTLLEIFERVGGQKGYCHTFDVYYVF 118
           ES + P +     K    I+      L++   D   +L+IF +   QKG+ H    Y V 
Sbjct: 39  ESSISPVETNPKTK---FISHESAVSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVL 98

Query: 119 INKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYL 178
           ++ L    KF  +D +L QMK E   F+ES+F+ +M+H+ ++    + + +   ++ +  
Sbjct: 99  LDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIAR 158

Query: 179 CEPTFKSYDLVLEILV 195
            +P+  +    L +L+
Sbjct: 159 VKPSLNAISTCLNLLI 171

[Close]

BLAST of CsaV3_1G017070 vs. Swiss-Prot
Match: sp|Q9FMF6|PP444_ARATH (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g64320 PE=2 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 8.5e-54
Identity = 105/163 (64.42%), Postives = 128/163 (78.53%), Query Frame = 0


Query: 52  SEPATEWESLLEPFDLTKLRKSHILITPVQLCKLLELPLDVPTLLEIFERVGGQKGYCHT 111
           ++ A EWE LL+PFDL  LR S   ITP QL KLLELPL+V T +E+F   G Q GY H+
Sbjct: 51  TDSANEWEKLLKPFDLDSLRNSFHKITPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHS 110

Query: 112 FDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLL 171
           FDVY V I KLGA G+FK ID+LL+QMK+EGIVF+ES+F+ IM+ Y KAG PGQ  RL+L
Sbjct: 111 FDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLML 170

Query: 172 DMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGV 215
           +MR VY CEPTFKSY++VLEILV+GNC +VA NVFYDMLS+ +
Sbjct: 171 EMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKI 213

[Close]

BLAST of CsaV3_1G017070 vs. Swiss-Prot
Match: sp|Q9FNL2|PP418_ARATH (Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana OX=3702 GN=At5g46100 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 9.9e-10
Identity = 42/140 (30.00%), Postives = 72/140 (51.43%), Query Frame = 0


Query: 77  ITPVQLCKLLELPLDVPTLLEIFERVGGQ--KGYCHTFDVYYVFINKLGAIGKFKLIDKL 136
           ITP Q+ KL+    DV   + +F+    +   GY H    +   + +L +  KFK  + L
Sbjct: 14  ITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDL 73

Query: 137 LMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILV 196
           +++MK E  V  E I + I + YG+  +P  ++R+   M+  + C+P+ K+Y  VL ILV
Sbjct: 74  IVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKD-FDCDPSQKAYVTVLAILV 133

Query: 197 TGNCPQVATNVFYDMLSKGV 215
             N   +A   + +M   G+
Sbjct: 134 EENQLNLAFKFYKNMREIGL 152

[Close]

BLAST of CsaV3_1G017070 vs. Swiss-Prot
Match: sp|Q9CA58|PP120_ARATH (Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis thaliana OX=3702 GN=At1g74580 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 1.7e-09
Identity = 36/119 (30.25%), Postives = 66/119 (55.46%), Query Frame = 0


Query: 77  ITPVQLCKLLELPLDVPTLLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLM 136
           + P  +  +++   D    LE+F  +  + G+ HT   Y   I KLG  GKF+ ++++L+
Sbjct: 5   LLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLV 64

Query: 137 QMKEE-GIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILV 195
            M+E  G    E +++  MK+YG+ G+  +A+  + +    Y CEPT  SY+ ++ +LV
Sbjct: 65  DMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVN-VFERMDFYDCEPTVFSYNAIMSVLV 122

[Close]

BLAST of CsaV3_1G017070 vs. Swiss-Prot
Match: sp|Q9SS81|PP221_ARATH (Pentatricopeptide repeat-containing protein At3g09060 OS=Arabidopsis thaliana OX=3702 GN=At3g09060 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.3e-06
Identity = 28/118 (23.73%), Postives = 57/118 (48.31%), Query Frame = 0


Query: 77  ITPVQLCKLLELPLDVPTLLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLM 136
           ++P  + KLL+   +      +F+      GY H+  VY+  + +L        + +++ 
Sbjct: 8   LSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVE 67

Query: 137 QMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILV 195
            ++ +     E + + ++K YGK   P QA+ +   MR ++ CEP  +SY+ +L   V
Sbjct: 68  LIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFV 125

[Close]

BLAST of CsaV3_1G017070 vs. Swiss-Prot
Match: sp|Q3E9F0|PP392_ARATH (Pentatricopeptide repeat-containing protein At5g18475 OS=Arabidopsis thaliana OX=3702 GN=At5g18475 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.3e-06
Identity = 34/136 (25.00%), Postives = 66/136 (48.53%), Query Frame = 0


Query: 59  ESLLEPFDLTKLRKSHILITPVQLCKLLELPLDVPTLLEIFERVGGQKGYCHTFDVYYVF 118
           ES + P +     K    I+      L++   D   +L+IF +   QKG+ H    Y V 
Sbjct: 39  ESSISPVETNPKTK---FISHESAVSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVL 98

Query: 119 INKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYL 178
           ++ L    KF  +D +L QMK E   F+ES+F+ +M+H+ ++    + + +   ++ +  
Sbjct: 99  LDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIAR 158

Query: 179 CEPTFKSYDLVLEILV 195
            +P+  +    L +L+
Sbjct: 159 VKPSLNAISTCLNLLI 171

[Close]

BLAST of CsaV3_1G017070 vs. TrEMBL
Match: tr|A0A1S3CJN8|A0A1S3CJN8_CUCME (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103501721 PE=4 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 8.4e-131
Identity = 393/415 (94.70%), Postives = 403/415 (97.11%), Query Frame = 0


Query: 1   MFSSFRNIVKRTKSLSSSESKIIILFENSCKASFLAGNIGDGSDPIKMNVESEPATEWES 60
           MFSSFRNIVKRTKSLSS ESKIIILFENSCKASFLAGNIGDGSD  KM+VE E  TEWES
Sbjct: 1   MFSSFRNIVKRTKSLSSLESKIIILFENSCKASFLAGNIGDGSDATKMSVEPELETEWES 60

Query: 61  LLEPFDLTKLRKSHILITPVQLCKLLELPLDVPTLLEIFERVGGQKGYCHTFDVYYVFIN 120
           LLEPFDLTKLR+S I ITPVQLCKLLELPLDVPTL EIF+RVGGQKGYCHTFDVYYVFIN
Sbjct: 61  LLEPFDLTKLRESRIRITPVQLCKLLELPLDVPTLSEIFDRVGGQKGYCHTFDVYYVFIN 120

Query: 121 KLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCE 180
           KLG +G+FK+IDKLLMQMKEEGIVF+ESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCE
Sbjct: 121 KLGTVGQFKVIDKLLMQMKEEGIVFQESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCE 180

Query: 181 PTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           PTFKSY++VLEILVTGNCPQVATNVFYDMLSKGVXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 PTFKSYNVVLEILVTGNCPQVATNVFYDMLSKGVXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIPCPNNAILNTL 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  KIPCPNNAILNTL
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKKIPCPNNAILNTL 360

Query: 361 INGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNE 416
           INGYVMSGQLKEAQ+FLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNE
Sbjct: 361 INGYVMSGQLKEAQNFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNE 415

[Close]

BLAST of CsaV3_1G017070 vs. TrEMBL
Match: tr|A0A2N9HZJ5|A0A2N9HZJ5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45387 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 4.0e-72
Identity = 298/410 (72.68%), Postives = 341/410 (83.17%), Query Frame = 0


Query: 8   IVKRTKSLSSSESKIIILFENSCKASFLAG----NIGDGSDPIKMNVESEPATEWESLLE 67
           ++KR+K  +    K+  LF+N C A    G       D +     N  SE  TEWE LL+
Sbjct: 1   MLKRSKLSTHVSKKLQSLFKNHCFAICSNGVSSRRFSDDAVLNDNNGSSESETEWERLLK 60

Query: 68  PFDLTKLRKSHILITPVQLCKLLELPLDVPTLLEIFERVGGQKGYCHTFDVYYVFINKLG 127
           PFDL +LR+S   I+P QLCKLLELPLDVPT +EIFE  G QKGYCH+F VYY  I+KLG
Sbjct: 61  PFDLKELRESLNQISPYQLCKLLELPLDVPTSMEIFEWAGAQKGYCHSFGVYYALIDKLG 120

Query: 128 AIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTF 187
             G+FK+ID+LLMQMKEEGIVF+ES+F++IMK+YG+A  PGQA RLLLDMR +Y CEPTF
Sbjct: 121 VAGEFKVIDRLLMQMKEEGIVFKESLFLLIMKYYGRADFPGQATRLLLDMRGIYSCEPTF 180

Query: 188 KSYDLVLEILVTGNCPQVATNVFYDMLSKGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 247
           +SY++VL+ILV+GNCP+VA NVFYDMLSKGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 RSYNVVLDILVSGNCPKVAPNVFYDMLSKGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 248 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 307
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 308 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIPCPNNAILNTLING 367
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +P PN  + NTLING
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPAPNVVLFNTLING 360

Query: 368 YVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLV 414
           YV SG+  EA+ F+ + M+N G  PD+FT+N+L+HGLCK+G L+ AR LV
Sbjct: 361 YVTSGRFDEAKDFMYDCMLNIGCVPDVFTFNMLIHGLCKKGCLTSARRLV 410

[Close]

BLAST of CsaV3_1G017070 vs. TrEMBL
Match: tr|A0A151U1Y9|A0A151U1Y9_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_005937 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 5.9e-68
Identity = 289/407 (71.01%), Postives = 339/407 (83.29%), Query Frame = 0


Query: 8   IVKRTKSLSSSESKIIILFENSCKASFLAGNIGDGSDPIKMNVESEPATEWESLLEPFDL 67
           ++K  KS +     I++ F+    +     ++ + +D    + ES+  TEWE LL+PFDL
Sbjct: 1   MLKTLKSSTHVSRTILLCFKIPSFSLCTIAHVNNFND---NDPESDTDTEWERLLKPFDL 60

Query: 68  TKLRKSHILITPVQLCKLLELPLDVPTLLEIFERVGGQKGYCHTFDVYYVFINKLGAIGK 127
            +LR+S   I+P QLCKLLELPLD+PT LE+F+R G QKGYCHTFD YY+ I+KLGA+G 
Sbjct: 61  KQLRRSLTPISPSQLCKLLELPLDIPTSLELFQRAGAQKGYCHTFDAYYLLIDKLGAVGD 120

Query: 128 FKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYD 187
           FKLIDKLL QMKEEGIVF+ES+F++IM++YGKAG PGQA RLLLDM  VY C+PTFKSY+
Sbjct: 121 FKLIDKLLKQMKEEGIVFKESLFILIMRYYGKAGLPGQATRLLLDMWGVYACDPTFKSYN 180

Query: 188 LVLEILVTGNCPQVATNVFYDMLSKGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 247
           +VLEILV GNCP+VA NVFYDML++GVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 VVLEILVDGNCPKVAPNVFYDMLNRGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 248 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 307
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 308 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIPCPNNAILNTLINGYVMS 367
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IP PN  + NTLINGYV S
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPNPNTVLYNTLINGYVAS 360

Query: 368 GQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVN 415
           G+ +EA+  L   M+  G++PD +T+NI++ GLCK+G L  A + ++
Sbjct: 361 GRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLCKKGYLVSALEFLH 404

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BLAST of CsaV3_1G017070 vs. TrEMBL
Match: tr|A0A251PDV0|A0A251PDV0_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G007800 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 1.3e-67
Identity = 129/190 (67.89%), Postives = 154/190 (81.05%), Query Frame = 0


Query: 25  LFENSCKASFLAGNIGDGSDPIKMNVESEPATEWESLLEPFDLTKLRKSHILITPVQLCK 84
           L +  C A F AG + D SD +     SE   EWE +L+PFDL +LRKS + ITP+QLCK
Sbjct: 18  LLKTHCFAIFSAGYVTDTSDRVLNTNGSESENEWEKMLKPFDLNELRKSLVQITPIQLCK 77

Query: 85  LLELPLDVPTLLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIV 144
           LLELPLDVPT +EIFE VG QKGY H+FDVYYV I+KLGA G+FK+ID+LLMQ+ EEGIV
Sbjct: 78  LLELPLDVPTSMEIFELVGAQKGYWHSFDVYYVLIDKLGAAGEFKVIDRLLMQIMEEGIV 137

Query: 145 FRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATN 204
           FRES+F++IMKHYG+AG PGQA RLLLDMR VY CEPTF+SY++VL ILV GNCP+VA N
Sbjct: 138 FRESLFIMIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLNILVAGNCPKVAPN 197

Query: 205 VFYDMLSKGV 215
           VFYDMLS+G+
Sbjct: 198 VFYDMLSRGI 207

[Close]

BLAST of CsaV3_1G017070 vs. TrEMBL
Match: tr|A0A061GXN1|A0A061GXN1_THECC (Pentatricopeptide repeat-containing protein, putative isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_039211 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 2.9e-67
Identity = 282/365 (77.26%), Postives = 321/365 (87.95%), Query Frame = 0


Query: 51  ESEPATEWESLLEPFDLTKLRKSHILITPVQLCKLLELPLDVPTLLEIFERVGGQKGYCH 110
           +SE   EWE LL+PFDL +LRKS   ITP QLCKLLELPLDVPT L++F   G QKGYCH
Sbjct: 37  QSESENEWERLLKPFDLDELRKSFNKITPYQLCKLLELPLDVPTSLKLFHWAGSQKGYCH 96

Query: 111 TFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLL 170
           TFDVYYV I+KLGA  +FK+ID LLMQMKEEG+VF+ES+F++IMK+YG AG PGQA RLL
Sbjct: 97  TFDVYYVLIDKLGAAKEFKVIDSLLMQMKEEGVVFKESLFILIMKYYGTAGFPGQATRLL 156

Query: 171 LDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVXXXXXXXXXXXXXXXX 230
           LD+++VY CEPT +S+++VL+ILV GNC +VA NVFYDML+KG+XXXXXXXXXXXXXXXX
Sbjct: 157 LDIKSVYSCEPTVRSFNVVLDILVAGNCHKVAPNVFYDMLNKGIXXXXXXXXXXXXXXXX 216

Query: 231 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 290
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 217 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 276

Query: 291 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIP 350
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  P
Sbjct: 277 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 336

Query: 351 CPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFAR 410
            PN  + NTLINGYV SG+  EA++ + + M++ G +PD+FT+NIL+HGLCK+G L  A 
Sbjct: 337 SPNIVLFNTLINGYVASGRFDEAKAVVYDIMLSIGCKPDVFTFNILIHGLCKKGCLGSAL 396

Query: 411 DLVNE 416
           +LVNE
Sbjct: 397 ELVNE 401

The following BLAST results are available for this feature:

BLAST of CsaV3_1G017070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139614.1	5.5e-142	100.00	PREDICTED: pentatricopeptide repeat-containing protein At5g64320, mitochondrial ...	[more]
XP_008463614.1	1.3e-130	94.70	PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g...	[more]
XP_022966667.1	7.7e-120	90.14	pentatricopeptide repeat-containing protein At5g64320, mitochondrial [Cucurbita ...	[more]
XP_023541625.1	5.0e-119	90.38	pentatricopeptide repeat-containing protein At5g64320, mitochondrial [Cucurbita ...	[more]
XP_022925312.1	3.8e-111	87.26	pentatricopeptide repeat-containing protein At5g64320, mitochondrial [Cucurbita ...	[more]

BLAST of CsaV3_1G017070 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G64320.1	4.7e-55	64.42	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G46100.1	5.5e-11	30.00	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G74580.1	9.3e-11	30.25	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G09060.1	7.4e-08	23.73	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G18475.1	7.4e-08	25.00	Pentatricopeptide repeat (PPR) superfamily protein	[more]

BLAST of CsaV3_1G017070 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FMF6\|PP444_ARATH	8.5e-54	64.42	Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop...	[more]
sp\|Q9FNL2\|PP418_ARATH	9.9e-10	30.00	Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9CA58\|PP120_ARATH	1.7e-09	30.25	Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis th...	[more]
sp\|Q9SS81\|PP221_ARATH	1.3e-06	23.73	Pentatricopeptide repeat-containing protein At3g09060 OS=Arabidopsis thaliana OX...	[more]
sp\|Q3E9F0\|PP392_ARATH	1.3e-06	25.00	Pentatricopeptide repeat-containing protein At5g18475 OS=Arabidopsis thaliana OX...	[more]

BLAST of CsaV3_1G017070 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CJN8\|A0A1S3CJN8_CUCME	8.4e-131	94.70	LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g64320, mito...	[more]
tr\|A0A2N9HZJ5\|A0A2N9HZJ5_FAGSY	4.0e-72	72.68	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45387 PE=4 SV=1	[more]
tr\|A0A151U1Y9\|A0A151U1Y9_CAJCA	5.9e-68	71.01	Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_005937 PE=4 SV=1	[more]
tr\|A0A251PDV0\|A0A251PDV0_PRUPE	1.3e-67	67.89	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G007800 PE=4 SV=1	[more]
tr\|A0A061GXN1\|A0A061GXN1_THECC	2.9e-67	77.26	Pentatricopeptide repeat-containing protein, putative isoform 1 OS=Theobroma cac...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR002885	Pentatricopeptide_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G017070.1	CsaV3_1G017070.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 317..346 e-value: 9.9E-7 score: 28.3 coord: 212..245 e-value: 5.5E-7 score: 29.1 coord: 665..693 e-value: 4.7E-7 score: 29.3
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 357..379 e-value: 0.0052 score: 16.8
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 388..437 e-value: 3.6E-19 score: 68.6 coord: 459..507 e-value: 7.6E-17 score: 61.1 coord: 251..300 e-value: 6.2E-14 score: 51.8 coord: 529..577 e-value: 3.1E-16 score: 59.2 coord: 599..647 e-value: 7.6E-15 score: 54.7
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 219..253 e-value: 1.1E-6 score: 26.4 coord: 601..635 e-value: 1.7E-8 score: 32.1 coord: 255..288 e-value: 1.7E-6 score: 25.8 coord: 531..564 e-value: 2.3E-7 score: 28.5 coord: 566..599 e-value: 8.1E-9 score: 33.1 coord: 496..527 e-value: 3.9E-8 score: 31.0 coord: 461..494 e-value: 6.4E-9 score: 33.5 coord: 636..670 e-value: 6.6E-10 score: 36.5 coord: 391..425 e-value: 2.1E-11 score: 41.3 coord: 290..322 e-value: 1.0E-6 score: 26.5 coord: 671..704 e-value: 7.2E-5 score: 20.7 coord: 426..459 e-value: 4.3E-7 score: 27.7
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 353..388 score: 10.282
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 669..703 score: 10.052
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 424..458 score: 11.334
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 389..423 score: 13.669
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 252..286 score: 11.389
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 599..633 score: 12.288
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 111..145 score: 6.829
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 182..216 score: 7.541
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 146..176 score: 6.467
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 322..352 score: 7.673
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 494..528 score: 11.937
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 634..668 score: 13.954
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 704..732 score: 5.294
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 287..321 score: 11.498
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 564..598 score: 12.145
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 217..251 score: 10.523
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 459..493 score: 11.849
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 529..563 score: 11.104
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 281..348 e-value: 2.8E-18 score: 68.1 coord: 209..280 e-value: 7.7E-20 score: 73.2 coord: 558..627 e-value: 3.2E-19 score: 71.2 coord: 628..697 e-value: 4.7E-19 score: 70.6 coord: 349..416 e-value: 1.3E-19 score: 72.4 coord: 66..208 e-value: 7.4E-11 score: 43.9 coord: 417..487 e-value: 2.5E-20 score: 74.7 coord: 488..557 e-value: 9.6E-21 score: 76.1
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 54..679
None	No IPR available	PANTHER	PTHR24015:SF905	SUBFAMILY NOT NAMED	coord: 54..679
None	No IPR available	SUPERFAMILY	SSF81901	HCP-like	coord: 467..661

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G017070	CSPI01G15810	Wild cucumber (PI 183967)	cpicucB001
CsaV3_1G017070	Cucsa.180460	Cucumber (Gy14) v1	cgycucB290
CsaV3_1G017070	CmaCh18G005980	Cucurbita maxima (Rimu)	cmacucB0476
CsaV3_1G017070	CmoCh13G004060	Cucurbita moschata (Rifu)	cmocucB0241
CsaV3_1G017070	CmoCh18G005960	Cucurbita moschata (Rifu)	cmocucB0459
CsaV3_1G017070	CsGy1G015490	Cucumber (Gy14) v2	cgybcucB002
CsaV3_1G017070	Carg25614	Silver-seed gourd	carcucB0056
CsaV3_1G017070	Cla009037	Watermelon (97103) v1	cucwmB057
CsaV3_1G017070	MELO3C025546	Melon (DHL92) v3.5.1	cucmeB014
CsaV3_1G017070	ClCG01G010600	Watermelon (Charleston Gray)	cucwcgB024
CsaV3_1G017070	Lsi02G011220	Bottle gourd (USVL1VR-Ls)	cuclsiB033
CsaV3_1G017070	MELO3C025545.2	Melon (DHL92) v3.6.1	cucmedB025
CsaV3_1G017070	Cla97C01G010370	Watermelon (97103) v2	cucwmbB008
CsaV3_1G017070	Bhi08G000634	Wax gourd	cucwgoB039

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CsaV3_1G017070	CsaV3_UNG047340	Cucumber (Chinese Long) v3	cuccucB056

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G017070	Silver-seed gourd	carcucB1083
CsaV3_1G017070	Silver-seed gourd	carcucB1084
CsaV3_1G017070	Cucurbita maxima (Rimu)	cmacucB0241
CsaV3_1G017070	Cucurbita maxima (Rimu)	cmacucB0255
CsaV3_1G017070	Cucurbita moschata (Rifu)	cmocucB0228
CsaV3_1G017070	Cucurbita pepo (Zucchini)	cpecucB0021
CsaV3_1G017070	Cucurbita pepo (Zucchini)	cpecucB0629