CmoCh18G005960 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh18G005960
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPentatricopeptide repeat-containing protein, putative
LocationCmo_Chr18 : 5553111 .. 5555306 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATACTTCTTTTGGAAACATTGTTAAACGGACCAAAAATCTTTGTTCTTTGGAGCCTAAGATTATTAATCATATTGAGAACTCTTGCAAATCTAGCTTCTTAGCTGGGAATATTGGAGATGGAAGTGGTTGTCCAACCAAGATGAATATTGAATCAGAGCGTGAAACCGAATGGGAGAGTTTACTAGAACCTTTTGATCTCACAAAGCTTAGAAAGTCTCACATTCTGATTACCCCTGTTCAACTATGCAAATTGCTTGAGCTTCCACTTGATGTGCCCACATTGTTGGAAATATTTGAACGGGTGGGTGCCCAAAAGGGTTATTGCCATACATTTGATGTATACTATGTGCTAATAAATAAGCTTGGAACAATTGGGGAGTTCAAGGTTATAGATAAACTGTTAACACAGATGAAAGAAGAAGGGATTGTTTTTCGAGAGTCCATTTTCATGATCATTATGAAACATTATGGGAAAGCTGGACAACCTGGACAGGCAATTCGATTGCTCCTAGATATGAGAGCTGTTTATTCATGTGAATCAACTTTTGAATCTTATAATGTAGTTTTGGAAACACTCGTGACGGGCAATTGTCCAAAAGTTGCTACGAATGTTTATTATGACATGTTGAGTAAGGGTATTTCTCCTACTGTTTTTACTTTTGGCATTGTGATGAAAGCTCTTTGTATGATTAATGAGGTCGACTCTGCATGCTCACTCCTTAGAGACATGACAAAGCATGGATGTGTACCGAATTCTATAGTTTATCAGACGTTAATACATGCGCTATCCAAAAATAACCAAGTTAGTGAAGCGTTAAAGCTTTTAGAAGAAATGTTTGTTATGGGATGCATGCCTGATGTTCAAACCTTCAATGATGTTATTCATGGCCTCTGCAAGGTAAATAAAATTCAAGATGCAGCAAAATTGGTTGATCGAATGCTTCTTCGAGGTTTTAACCCAGATAGTATGACTTATGGTTTTCTGTTGCATGGATTATGTAGGATTGGAAAACTCAATGAAGCAAGAGCATTATTGAACAAAATTCCTTGTCCAAATAATGCGATCTTGAATACGTTAATCAATGGGTATGTTATGAGTGGACGACTTAAGGAAGCTCAAAGCTTTCTTAATGAGACTATGATAAACTTTGGTTTTGACCCTGATATTTTTACATACAACATCTTGATGCATGGGCTTTGCAAAGAGGGGAGTCTTGGTTTTGCTCGTGATTTGGTTAATGAGATGTCTAGGAGGGGTTGCAAGCCGAATGTGATCACATATGCAATATTGATTGATGGGCTTTGTAAAGCTGGGTGTCTTGAAGAGGCTGGTCTTGTTTTACATGAGATGTCAACAAAGGGATTGACTATAAATACAGTTATATACAATTGCTTGATATGCGCCCTATGTAGGAATGAGAAGGTTCATGCTGCTTTAAATCTGTTTCGTGAAATGCCCACGAAAGGTTGCAAGCCCGACTTATTTACATACAATTCTCTAATCTTTGGATTGTGCAAGGTTGATCAGATTGATGAAGCCTTCAGGTTGTTTCATAATTTGTTATTGGACGGTGTTGTTGCCAACAACGTGACTTACAATACACTGATTCATGCACTTTTGAGGAGAGGTGCATTCCAAGAAGCGCTTACACTTGTTAATGATATGTTGTTCAGAGGCTGCATCCTCGATAAGATTACTTACAATGGACTGATAAAAGCGTTTTGCAAAGCTGGGAATGTTGAAAAAGGATTGGAATTATACGAGAAAATGATAATGGATGGACTTAACGCTGATACAATATCGTGTAATATTCTCATCAACGGGCTCTGTAAAGTTGGAAAAGTGGACAATGCATTTGAGTTTCTAAGAGATGCGATTAATCGAGGTTTCGTGCCTGACATAGTCACATATAACAGCGTTATAAATGGACTTTGCAAGGTTGGACGTATCAGGGAAGCCTTAAATCTATTTGATAGATTACAAGTCGAAGGTGTTCGCCCTGATGCTTTTACGTATAATACTTTTATCAGTTGGCACTGTAAAGAAGGCATGGTGAATGATGCTTGTTTATTTTTTTATAGAGGTATAGAGAATGGTTTTGTACCTAGTAATGTGACTTGGAATGTGCTGGTCAATACTTTGGTAAAACAAAGTCACGAGAATATGTTTTTCGTGTCAGATGAGTTCTGA

mRNA sequence

ATGTATACTTCTTTTGGAAACATTGTTAAACGGACCAAAAATCTTTGTTCTTTGGAGCCTAAGATTATTAATCATATTGAGAACTCTTGCAAATCTAGCTTCTTAGCTGGGAATATTGGAGATGGAAGTGGTTGTCCAACCAAGATGAATATTGAATCAGAGCGTGAAACCGAATGGGAGAGTTTACTAGAACCTTTTGATCTCACAAAGCTTAGAAAGTCTCACATTCTGATTACCCCTGTTCAACTATGCAAATTGCTTGAGCTTCCACTTGATGTGCCCACATTGTTGGAAATATTTGAACGGGTGGGTGCCCAAAAGGGTTATTGCCATACATTTGATGTATACTATGTGCTAATAAATAAGCTTGGAACAATTGGGGAGTTCAAGGTTATAGATAAACTGTTAACACAGATGAAAGAAGAAGGGATTGTTTTTCGAGAGTCCATTTTCATGATCATTATGAAACATTATGGGAAAGCTGGACAACCTGGACAGGCAATTCGATTGCTCCTAGATATGAGAGCTGTTTATTCATGTGAATCAACTTTTGAATCTTATAATGTAGTTTTGGAAACACTCGTGACGGGCAATTGTCCAAAAGTTGCTACGAATGTTTATTATGACATGTTGAGTAAGGGTATTTCTCCTACTGTTTTTACTTTTGGCATTGTGATGAAAGCTCTTTGTATGATTAATGAGGTCGACTCTGCATGCTCACTCCTTAGAGACATGACAAAGCATGGATGTGTACCGAATTCTATAGTTTATCAGACGTTAATACATGCGCTATCCAAAAATAACCAAGTTAGTGAAGCGTTAAAGCTTTTAGAAGAAATGTTTGTTATGGGATGCATGCCTGATGTTCAAACCTTCAATGATGTTATTCATGGCCTCTGCAAGGTAAATAAAATTCAAGATGCAGCAAAATTGGTTGATCGAATGCTTCTTCGAGGTTTTAACCCAGATAGTATGACTTATGGTTTTCTGTTGCATGGATTATGTAGGATTGGAAAACTCAATGAAGCAAGAGCATTATTGAACAAAATTCCTTGTCCAAATAATGCGATCTTGAATACGTTAATCAATGGGTATGTTATGAGTGGACGACTTAAGGAAGCTCAAAGCTTTCTTAATGAGACTATGATAAACTTTGGTTTTGACCCTGATATTTTTACATACAACATCTTGATGCATGGGCTTTGCAAAGAGGGGAGTCTTGGTTTTGCTCGTGATTTGGTTAATGAGATGTCTAGGAGGGGTTGCAAGCCGAATGTGATCACATATGCAATATTGATTGATGGGCTTTGTAAAGCTGGGTGTCTTGAAGAGGCTGGTCTTGTTTTACATGAGATGTCAACAAAGGGATTGACTATAAATACAGTTATATACAATTGCTTGATATGCGCCCTATGTAGGAATGAGAAGGTTCATGCTGCTTTAAATCTGTTTCGTGAAATGCCCACGAAAGGTTGCAAGCCCGACTTATTTACATACAATTCTCTAATCTTTGGATTGTGCAAGGTTGATCAGATTGATGAAGCCTTCAGGTTGTTTCATAATTTGTTATTGGACGGTGTTGTTGCCAACAACGTGACTTACAATACACTGATTCATGCACTTTTGAGGAGAGGTGCATTCCAAGAAGCGCTTACACTTGTTAATGATATGTTGTTCAGAGGCTGCATCCTCGATAAGATTACTTACAATGGACTGATAAAAGCGTTTTGCAAAGCTGGGAATGTTGAAAAAGGATTGGAATTATACGAGAAAATGATAATGGATGGACTTAACGCTGATACAATATCGTGTAATATTCTCATCAACGGGCTCTGTAAAGTTGGAAAAGTGGACAATGCATTTGAGTTTCTAAGAGATGCGATTAATCGAGGTTTCGTGCCTGACATAGTCACATATAACAGCGTTATAAATGGACTTTGCAAGGTTGGACGTATCAGGGAAGCCTTAAATCTATTTGATAGATTACAAGTCGAAGGTGTTCGCCCTGATGCTTTTACGTATAATACTTTTATCAGTTGGCACTGTAAAGAAGGCATGGTGAATGATGCTTGTTTATTTTTTTATAGAGGTATAGAGAATGGTTTTGTACCTAGTAATGTGACTTGGAATGTGCTGGTCAATACTTTGGTAAAACAAAGTCACGAGAATATGTTTTTCGTGTCAGATGAGTTCTGA

Coding sequence (CDS)

ATGTATACTTCTTTTGGAAACATTGTTAAACGGACCAAAAATCTTTGTTCTTTGGAGCCTAAGATTATTAATCATATTGAGAACTCTTGCAAATCTAGCTTCTTAGCTGGGAATATTGGAGATGGAAGTGGTTGTCCAACCAAGATGAATATTGAATCAGAGCGTGAAACCGAATGGGAGAGTTTACTAGAACCTTTTGATCTCACAAAGCTTAGAAAGTCTCACATTCTGATTACCCCTGTTCAACTATGCAAATTGCTTGAGCTTCCACTTGATGTGCCCACATTGTTGGAAATATTTGAACGGGTGGGTGCCCAAAAGGGTTATTGCCATACATTTGATGTATACTATGTGCTAATAAATAAGCTTGGAACAATTGGGGAGTTCAAGGTTATAGATAAACTGTTAACACAGATGAAAGAAGAAGGGATTGTTTTTCGAGAGTCCATTTTCATGATCATTATGAAACATTATGGGAAAGCTGGACAACCTGGACAGGCAATTCGATTGCTCCTAGATATGAGAGCTGTTTATTCATGTGAATCAACTTTTGAATCTTATAATGTAGTTTTGGAAACACTCGTGACGGGCAATTGTCCAAAAGTTGCTACGAATGTTTATTATGACATGTTGAGTAAGGGTATTTCTCCTACTGTTTTTACTTTTGGCATTGTGATGAAAGCTCTTTGTATGATTAATGAGGTCGACTCTGCATGCTCACTCCTTAGAGACATGACAAAGCATGGATGTGTACCGAATTCTATAGTTTATCAGACGTTAATACATGCGCTATCCAAAAATAACCAAGTTAGTGAAGCGTTAAAGCTTTTAGAAGAAATGTTTGTTATGGGATGCATGCCTGATGTTCAAACCTTCAATGATGTTATTCATGGCCTCTGCAAGGTAAATAAAATTCAAGATGCAGCAAAATTGGTTGATCGAATGCTTCTTCGAGGTTTTAACCCAGATAGTATGACTTATGGTTTTCTGTTGCATGGATTATGTAGGATTGGAAAACTCAATGAAGCAAGAGCATTATTGAACAAAATTCCTTGTCCAAATAATGCGATCTTGAATACGTTAATCAATGGGTATGTTATGAGTGGACGACTTAAGGAAGCTCAAAGCTTTCTTAATGAGACTATGATAAACTTTGGTTTTGACCCTGATATTTTTACATACAACATCTTGATGCATGGGCTTTGCAAAGAGGGGAGTCTTGGTTTTGCTCGTGATTTGGTTAATGAGATGTCTAGGAGGGGTTGCAAGCCGAATGTGATCACATATGCAATATTGATTGATGGGCTTTGTAAAGCTGGGTGTCTTGAAGAGGCTGGTCTTGTTTTACATGAGATGTCAACAAAGGGATTGACTATAAATACAGTTATATACAATTGCTTGATATGCGCCCTATGTAGGAATGAGAAGGTTCATGCTGCTTTAAATCTGTTTCGTGAAATGCCCACGAAAGGTTGCAAGCCCGACTTATTTACATACAATTCTCTAATCTTTGGATTGTGCAAGGTTGATCAGATTGATGAAGCCTTCAGGTTGTTTCATAATTTGTTATTGGACGGTGTTGTTGCCAACAACGTGACTTACAATACACTGATTCATGCACTTTTGAGGAGAGGTGCATTCCAAGAAGCGCTTACACTTGTTAATGATATGTTGTTCAGAGGCTGCATCCTCGATAAGATTACTTACAATGGACTGATAAAAGCGTTTTGCAAAGCTGGGAATGTTGAAAAAGGATTGGAATTATACGAGAAAATGATAATGGATGGACTTAACGCTGATACAATATCGTGTAATATTCTCATCAACGGGCTCTGTAAAGTTGGAAAAGTGGACAATGCATTTGAGTTTCTAAGAGATGCGATTAATCGAGGTTTCGTGCCTGACATAGTCACATATAACAGCGTTATAAATGGACTTTGCAAGGTTGGACGTATCAGGGAAGCCTTAAATCTATTTGATAGATTACAAGTCGAAGGTGTTCGCCCTGATGCTTTTACGTATAATACTTTTATCAGTTGGCACTGTAAAGAAGGCATGGTGAATGATGCTTGTTTATTTTTTTATAGAGGTATAGAGAATGGTTTTGTACCTAGTAATGTGACTTGGAATGTGCTGGTCAATACTTTGGTAAAACAAAGTCACGAGAATATGTTTTTCGTGTCAGATGAGTTCTGA
Homology
[Close]
BLAST of CmoCh18G005960 vs. Swiss-Prot
Match: PP444_ARATH (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2 SV=1)

HSP 1 Score: 839.7 bits (2168), Expect = 2.4e-242
Identity = 399/691 (57.74%), Postives = 523/691 (75.69%), Query Frame = 1 

Query: 29  SCKSSFLAGNIGDGSGCPTKMNIESERETEWESLLEPFDLTKLRKSHILITPVQLCKLLE 88
           S  S F  G   DG G   ++   ++   EWE LL+PFDL  LR S   ITP QL KLLE
Sbjct: 28  SLSSRFSGGGGDDGGGSSPEIG-GTDSANEWEKLLKPFDLDSLRNSFHKITPFQLYKLLE 87

Query: 89  LPLDVPTLLEIFERVGAQKGYCHTFDVYYVLINKLGTIGEFKVIDKLLTQMKEEGIVFRE 148
           LPL+V T +E+F   G+Q GY H+FDVY VLI KLG  GEFK ID+LL QMK+EGIVF+E
Sbjct: 88  LPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKE 147

Query: 149 SIFMIIMKHYGKAGQPGQAIRLLLDMRAVYSCESTFESYNVVLETLVTGNCPKVATNVYY 208
           S+F+ IM+ Y KAG PGQ  RL+L+MR VYSCE TF+SYNVVLE LV+GNC KVA NV+Y
Sbjct: 148 SLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFY 207

Query: 209 DMLSKGISPTVFTFGIVMKALCMINEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSKNN 268
           DMLS+ I PT+FTFG+VMKA C +NE+DSA SLLRDMTKHGCVPNS++YQTLIH+LSK N
Sbjct: 208 DMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCN 267

Query: 269 QVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIQDAAKLVDRMLLRGFNPDSMTYG 328
           +V+EAL+LLEEMF+MGC+PD +TFNDVI GLCK ++I +AAK+V+RML+RGF PD +TYG
Sbjct: 268 RVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYG 327

Query: 329 FLLHGLCRIGKLNEARALLNKIPCPNNAILNTLINGYVMSGRLKEAQSFLNETMINFGFD 388
           +L++GLC+IG+++ A+ L  +IP P   I NTLI+G+V  GRL +A++ L++ + ++G  
Sbjct: 328 YLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIV 387

Query: 389 PDIFTYNILMHGLCKEGSLGFARDLVNEMSRRGCKPNVITYAILIDGLCKAGCLEEAGLV 448
           PD+ TYN L++G  KEG +G A +++++M  +GCKPNV +Y IL+DG CK G ++EA  V
Sbjct: 388 PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 447

Query: 449 LHEMSTKGLTINTVIYNCLICALCRNEKVHAALNLFREMPTKGCKPDLFTYNSLIFGLCK 508
           L+EMS  GL  NTV +NCLI A C+  ++  A+ +FREMP KGCKPD++T+NSLI GLC+
Sbjct: 448 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 507

Query: 509 VDQIDEAFRLFHNLLLDGVVANNVTYNTLIHALLRRGAFQEALTLVNDMLFRGCILDKIT 568
           VD+I  A  L  +++ +GVVAN VTYNTLI+A LRRG  +EA  LVN+M+F+G  LD+IT
Sbjct: 508 VDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEIT 567

Query: 569 YNGLIKAFCKAGNVEKGLELYEKMIMDGLNADTISCNILINGLCKVGKVDNAFEFLRDAI 628
           YN LIK  C+AG V+K   L+EKM+ DG     ISCNILINGLC+ G V+ A EF ++ +
Sbjct: 568 YNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMV 627

Query: 629 NRGFVPDIVTYNSVINGLCKVGRIREALNLFDRLQVEGVRPDAFTYNTFISWHCKEGMVN 688
            RG  PDIVT+NS+INGLC+ GRI + L +F +LQ EG+ PD  T+NT +SW CK G V 
Sbjct: 628 LRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVY 687

Query: 689 DACLFFYRGIENGFVPSNVTWNVLVNTLVKQ 720
           DACL    GIE+GFVP++ TW++L+ +++ Q
Sbjct: 688 DACLLLDEGIEDGFVPNHRTWSILLQSIIPQ 717

[Close]
BLAST of CmoCh18G005960 vs. Swiss-Prot
Match: PP120_ARATH (Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 1.5e-90
Identity = 193/649 (29.74%), Postives = 326/649 (50.23%), Query Frame = 1 

Query: 78  ITPVQLCKLLELPLDVPTLLEIFERVGAQKGYCHTFDVYYVLINKLGTIGEFKVIDKLLT 137
           + P  +  +++   D    LE+F  +  + G+ HT   Y  +I KLG  G+F+ ++++L 
Sbjct: 5   LLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLV 64

Query: 138 QMKEE-GIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYSCESTFESYNVVLETLVT 197
            M+E  G    E +++  MK+YG+ G+  +A+ +   M   Y CE T  SYN ++  LV 
Sbjct: 65  DMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMD-FYDCEPTVFSYNAIMSVLVD 124

Query: 198 GNCPKVATNVYYDMLSKGISPTVFTFGIVMKALCMINEVDSACSLLRDMTKHGCVPNSIV 257
                 A  VY  M  +GI+P V++F I MK+ C  +   +A  LL +M+  GC  N + 
Sbjct: 125 SGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVA 184

Query: 258 YQTLIHALSKNNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIQDAAKLVDRML 317
           Y T++    + N  +E  +L  +M   G    + TFN ++  LCK   +++  KL+D+++
Sbjct: 185 YCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVI 244

Query: 318 LRGFNPDSMTYGFLLHGLCRIGKLNEARALLNKIPCPNNAILNTLINGYVMSGRLKEAQS 377
            RG  P+  TY   + GLC+ G+L+ A   +  + C                        
Sbjct: 245 KRGVLPNLFTYNLFIQGLCQRGELDGA---VRMVGC------------------------ 304

Query: 378 FLNETMINFGFDPDIFTYNILMHGLCKEGSLGFARDLVNEMSRRGCKPNVITYAILIDGL 437
                +I  G  PD+ TYN L++GLCK      A   + +M   G +P+  TY  LI G 
Sbjct: 305 -----LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGY 364

Query: 438 CKAGCLEEAGLVLHEMSTKGLTINTVIYNCLICALCRNEKVHAALNLFREMPTKGCKPDL 497
           CK G ++ A  ++ +    G   +   Y  LI  LC   + + AL LF E   KG KP++
Sbjct: 365 CKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNV 424

Query: 498 FTYNSLIFGLCKVDQIDEAFRLFHNLLLDGVVANNVTYNTLIHALLRRGAFQEALTLVND 557
             YN+LI GL     I EA +L + +   G++    T+N L++ L + G   +A  LV  
Sbjct: 425 ILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKV 484

Query: 558 MLFRGCILDKITYNGLIKAFCKAGNVEKGLELYEKMIMDGLNADTISCNILINGLCKVGK 617
           M+ +G   D  T+N LI  +     +E  LE+ + M+ +G++ D  + N L+NGLCK  K
Sbjct: 485 MISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSK 544

Query: 618 VDNAFEFLRDAINRGFVPDIVTYNSVINGLCKVGRIREALNLFDRLQVEGVRPDAFTYNT 677
            ++  E  +  + +G  P++ T+N ++  LC+  ++ EAL L + ++ + V PDA T+ T
Sbjct: 545 FEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGT 604

Query: 678 FISWHCKEGMVNDACLFFYRGIENGFVPSNV-TWNVLVNTLVKQSHENM 725
            I   CK G ++ A   F +  E   V S+  T+N++++   ++ +  M
Sbjct: 605 LIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTM 620

[Close]
BLAST of CmoCh18G005960 vs. Swiss-Prot
Match: PP281_ARATH (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 2.5e-90
Identity = 190/640 (29.69%), Postives = 313/640 (48.91%), Query Frame = 1 

Query: 79  TPVQLCKLLELPLDVPTLLEIFERVGAQKGYCHTFDVYYVLINKLGTIGEFKVIDKLLTQ 138
           T V+L   L    D    L +F     +  +     +Y  ++ +LG  G F  + K+L  
Sbjct: 49  TDVKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILED 108

Query: 139 MKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYSCESTFESYNVVLETLVTGN 198
           MK        S F+I+++ Y +     + + ++  M   +  +     YN +L  LV GN
Sbjct: 109 MKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGN 168

Query: 199 CPKVATNVYYDMLSKGISPTVFTFGIVMKALCMINEVDSACSLLRDMTKHGCVPNSIVYQ 258
             K+    +  M   GI P V TF +++KALC  +++  A  +L DM  +G VP+   + 
Sbjct: 169 SLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFT 228

Query: 259 TLIHALSKNNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIQDAAKLVDRMLLR 318
           T++    +   +  AL++ E+M   GC     + N ++HG CK  +++DA   +  M  +
Sbjct: 229 TVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQ 288

Query: 319 -GFNPDSMTYGFLLHGLCRIGKLNEARALLNKIPCPNNAILNTLINGYVMSGRLKEAQSF 378
            GF PD  T+  L++GLC+ G +  A  ++                              
Sbjct: 289 DGFFPDQYTFNTLVNGLCKAGHVKHAIEIM------------------------------ 348

Query: 379 LNETMINFGFDPDIFTYNILMHGLCKEGSLGFARDLVNEMSRRGCKPNVITYAILIDGLC 438
             + M+  G+DPD++TYN ++ GLCK G +  A +++++M  R C PN +TY  LI  LC
Sbjct: 349 --DVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLC 408

Query: 439 KAGCLEEAGLVLHEMSTKGLTINTVIYNCLICALCRNEKVHAALNLFREMPTKGCKPDLF 498
           K   +EEA  +   +++KG+  +   +N LI  LC       A+ LF EM +KGC+PD F
Sbjct: 409 KENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEF 468

Query: 499 TYNSLIFGLCKVDQIDEAFRLFHNLLLDGVVANNVTYNTLIHALLRRGAFQEALTLVNDM 558
           TYN LI  LC   ++DEA  +   + L G   + +TYNTLI    +    +EA  + ++M
Sbjct: 469 TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM 528

Query: 559 LFRGCILDKITYNGLIKAFCKAGNVEKGLELYEKMIMDGLNADTISCNILINGLCKVGKV 618
              G   + +TYN LI   CK+  VE   +L ++MIM+G   D  + N L+   C+ G +
Sbjct: 529 EVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDI 588

Query: 619 DNAFEFLRDAINRGFVPDIVTYNSVINGLCKVGRIREALNLFDRLQVEGVRPDAFTYNTF 678
             A + ++   + G  PDIVTY ++I+GLCK GR+  A  L   +Q++G+      YN  
Sbjct: 589 KKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPV 648

Query: 679 ISWHCKEGMVNDACLFFYRGIE-NGFVPSNVTWNVLVNTL 717
           I    ++    +A   F   +E N   P  V++ ++   L
Sbjct: 649 IQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGL 656

[Close]
BLAST of CmoCh18G005960 vs. Swiss-Prot
Match: PP270_ARATH (Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 4.7e-89
Identity = 200/634 (31.55%), Postives = 330/634 (52.05%), Query Frame = 1 

Query: 63  LEPFDL-TKLRKSHIL--------ITPVQLCKLLELPLDVPTLLEIFERVGAQKGYCHTF 122
           L PF L T L  +H+L        I  + + K L     VP  L  F+ +     + HT 
Sbjct: 17  LIPFVLNTNLNVNHLLTESPNHAEIKELDVVKRLRQESCVPLALHFFKSIANSNLFKHTP 76

Query: 123 DVYYVLINKLGTIGEFKVIDKLLTQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLD 182
             + V+I KL   G+   +  LL QMK +G    E +F+ ++  Y + G   +A+ +   
Sbjct: 77  LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 136

Query: 183 MRAVYSCESTFESYNVVLETLVTGNCPKVATNVYYDMLSKGISPTVFTFGIVMKALCMIN 242
           ++  + C+ + + YN VL+TL+  N  ++   VY DM   G  P VFT+ +++KALC  N
Sbjct: 137 IKE-FGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNN 196

Query: 243 EVDSACSLLRDMTKHGCVPNSIVYQTLIHALSKNNQVSEALKLLEEMFVMGCMPDVQTFN 302
           +VD A  LL +M+  GC P+++ Y T+I ++ +   V E  +L E        P V  +N
Sbjct: 197 KVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF-----EPVVSVYN 256

Query: 303 DVIHGLCKVNKIQDAAKLVDRMLLRGFNPDSMTYGFLLHGLCRIGKLNEARALLNKI--- 362
            +I+GLCK +  + A +L+  M+ +G +P+ ++Y  L++ LC  G++  A + L ++   
Sbjct: 257 ALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKR 316

Query: 363 PC-PNNAILNTLINGYVMSGRLKEAQSFLNETMINFGFDPDIFTYNILMHGLCKEGSLGF 422
            C PN   L++L+ G  + G   +A    N+ +  FG  P++  YN L+ G C  G++  
Sbjct: 317 GCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVK 376

Query: 423 ARDLVNEMSRRGCKPNVITYAILIDGLCKAGCLEEAGLVLHEMSTKGLTINTVIYNCLIC 482
           A  + + M   GC PN+ TY  LI+G  K G L+ A  + ++M T G   N V+Y  ++ 
Sbjct: 377 AVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVE 436

Query: 483 ALCRNEKVHAALNLFREMPTKGCKPDLFTYNSLIFGLCKVDQIDEAFRLFHNL-LLDGVV 542
           ALCR+ K   A +L   M  + C P + T+N+ I GLC   ++D A ++F  +       
Sbjct: 437 ALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCP 496

Query: 543 ANNVTYNTLIHALLRRGAFQEALTLVNDMLFRGCILDKITYNGLIKAFCKAGNVEKGLEL 602
            N VTYN L+  L +    +EA  L  ++  RG      TYN L+   C AG     L+L
Sbjct: 497 PNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQL 556

Query: 603 YEKMIMDGLNADTISCNILINGLCKVGKVDNAFEFLRDAIN---RGFVPDIVTYNSVING 662
             KM++DG + D I+ N++I   CK GK + A + L D ++   R + PD+++Y +VI G
Sbjct: 557 VGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML-DLVSCGRRKWRPDVISYTNVIWG 616

Query: 663 LCKVGRIREALNLFDRLQVEGVRPDAFTYNTFIS 680
           LC+     + + L +R+   G+ P   T++  I+
Sbjct: 617 LCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643

[Close]
BLAST of CmoCh18G005960 vs. Swiss-Prot
Match: PPR98_ARATH (Pentatricopeptide repeat-containing protein At1g63080, mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.8e-85
Identity = 165/476 (34.66%), Postives = 267/476 (56.09%), Query Frame = 1 

Query: 214 GISPTVFTFGIVMKALCMINEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSKNNQVSEA 273
           G+S  ++T+ I++  LC  +++  A ++L  M K G  P+ +   +L++     N++SEA
Sbjct: 95  GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154

Query: 274 LKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIQDAAKLVDRMLLRGFNPDSMTYGFLLHG 333
           + L+++M  MG  PD  TF  ++HGL + NK  +A  LV+RM+++G  PD +TYG +++G
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 214

Query: 334 LCRIGKLNEARALLNKIPC----PNNAILNTLINGYVMSGRLKEAQSFLNETMINFGFDP 393
           LC+ G+ + A  LLNK+       +  I +T+I+       + +A +   E M N G  P
Sbjct: 215 LCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTE-MDNKGIRP 274

Query: 394 DIFTYNILMHGLCKEGSLGFARDLVNEMSRRGCKPNVITYAILIDGLCKAGCLEEAGLVL 453
           D+FTY+ L+  LC  G    A  L+++M  R   PNV+T+  LID   K G L EA  + 
Sbjct: 275 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 334

Query: 454 HEMSTKGLTINTVIYNCLICALCRNEKVHAALNLFREMPTKGCKPDLFTYNSLIFGLCKV 513
            EM  + +  N V YN LI   C ++++  A  +F  M +K C PD+ TYN+LI G CK 
Sbjct: 335 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 394

Query: 514 DQIDEAFRLFHNLLLDGVVANNVTYNTLIHALLRRGAFQEALTLVNDMLFRGCILDKITY 573
            ++ +   LF ++   G+V N VTY TLIH   +      A  +   M+  G   + +TY
Sbjct: 395 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 454

Query: 574 NGLIKAFCKAGNVEKGLELYEKMIMDGLNADTISCNILINGLCKVGKVDNAFEFLRDAIN 633
           N L+   CK G +EK + ++E +    +  D  + NI+  G+CK GKV++ ++       
Sbjct: 455 NTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSL 514

Query: 634 RGFVPDIVTYNSVINGLCKVGRIREALNLFDRLQVEGVRPDAFTYNTFISWHCKEG 686
           +G  PD++ YN++I+G CK G   EA  LF +++ +G  PD+ TYNT I  H ++G
Sbjct: 515 KGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDG 569

[Close]
BLAST of CmoCh18G005960 vs. TrEMBL
Match: A5AXD2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039434 PE=4 SV=1)

HSP 1 Score: 979.5 bits (2531), Expect = 2.1e-282
Identity = 460/666 (69.07%), Postives = 552/666 (82.88%), Query Frame = 1 

Query: 57  TEWESLLEPFDLTKLRKSHILITPVQLCKLLELPLDVPTLLEIFERVGAQKGYCHTFDVY 116
           TEWE LL+PFDL +LR S   ITP QLCKLLELPLDVPT +E+F+  G QKGYCH FDVY
Sbjct: 55  TEWERLLKPFDLPELRTSLTRITPYQLCKLLELPLDVPTSMELFQWAGTQKGYCHMFDVY 114

Query: 117 YVLINKLGTIGEFKVIDKLLTQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRA 176
           Y+LI+KLG  GEFK ID LL QMK+EGIVFRES+F++IMKHYG+AG PGQA RLLLDMR 
Sbjct: 115 YMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRG 174

Query: 177 VYSCESTFESYNVVLETLVTGNCPKVATNVYYDMLSKGISPTVFTFGIVMKALCMINEVD 236
           VYSCE TF SYNVVL+ L+ GNCPKV  NV+Y+MLSKGISPTV+TFG+VMKALC++NEVD
Sbjct: 175 VYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVD 234

Query: 237 SACSLLRDMTKHGCVPNSIVYQTLIHALSKNNQVSEALKLLEEMFVMGCMPDVQTFNDVI 296
           SAC+LL+DMT+HGCVPN+IVYQTLIHAL K  +V+E LKLLEEM +MGC+PDV TFND I
Sbjct: 235 SACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAI 294

Query: 297 HGLCKVNKIQDAAKLVDRMLLRGFNPDSMTYGFLLHGLCRIGKLNEARALLNKIPCPNNA 356
           HGLCK+ +I +AAKLVDRMLLRGF P+S TYG L+HGLCR+GK++EAR LLNK+P PN  
Sbjct: 295 HGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVV 354

Query: 357 ILNTLINGYVMSGRLKEAQSFLNETMINFGFDPDIFTYNILMHGLCKEGSLGFARDLVNE 416
           + NTLINGYV  GRL EA++ ++E+M++ G  PDIFTYN L+ GLCK+G L  AR+L+NE
Sbjct: 355 LFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNE 414

Query: 417 MSRRGCKPNVITYAILIDGLCKAGCLEEAGLVLHEMSTKGLTINTVIYNCLICALCRNEK 476
           M  +GC+PNVITY ILID  CK G LEEA  VL EMS KGL +N V YNCLI ALC++EK
Sbjct: 415 MQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEK 474

Query: 477 VHAALNLFREMPTKGCKPDLFTYNSLIFGLCKVDQIDEAFRLFHNLLLDGVVANNVTYNT 536
           V  ALN+F +M +KGCKPD+FT+NSLIFGLCKV++ +EA  L+ ++LL+GV+AN +TYNT
Sbjct: 475 VQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNT 534

Query: 537 LIHALLRRGAFQEALTLVNDMLFRGCILDKITYNGLIKAFCKAGNVEKGLELYEKMIMDG 596
           LIHA LRRGA QEAL LVNDMLFRGC LD ITYNGLIKA C+AGN+EKGL L+E M+  G
Sbjct: 535 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 594

Query: 597 LNADTISCNILINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVINGLCKVGRIREAL 656
           LN + ISCNILINGLC+ G + +A EFLRD I+RG  PDIVTYNS+INGLCK GR +EAL
Sbjct: 595 LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 654

Query: 657 NLFDRLQVEGVRPDAFTYNTFISWHCKEGMVNDACLFFYRGIENGFVPSNVTWNVLVNTL 716
           NLFD+LQVEG+ PDA TYNT ISWHCKEGM +DA L   RG+++GF+P+ VTW +LV+  
Sbjct: 655 NLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNF 714

Query: 717 VKQSHE 723
           +K+  +
Sbjct: 715 IKEGDQ 720

[Close]
BLAST of CmoCh18G005960 vs. TrEMBL
Match: A0A061GXN1_THECC (Pentatricopeptide repeat-containing protein, putative isoform 1 OS=Theobroma cacao GN=TCM_039211 PE=4 SV=1)

HSP 1 Score: 978.4 bits (2528), Expect = 4.8e-282
Identity = 463/674 (68.69%), Postives = 560/674 (83.09%), Query Frame = 1 

Query: 52  ESERETEWESLLEPFDLTKLRKSHILITPVQLCKLLELPLDVPTLLEIFERVGAQKGYCH 111
           +SE E EWE LL+PFDL +LRKS   ITP QLCKLLELPLDVPT L++F   G+QKGYCH
Sbjct: 37  QSESENEWERLLKPFDLDELRKSFNKITPYQLCKLLELPLDVPTSLKLFHWAGSQKGYCH 96

Query: 112 TFDVYYVLINKLGTIGEFKVIDKLLTQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLL 171
           TFDVYYVLI+KLG   EFKVID LL QMKEEG+VF+ES+F++IMK+YG AG PGQA RLL
Sbjct: 97  TFDVYYVLIDKLGAAKEFKVIDSLLMQMKEEGVVFKESLFILIMKYYGTAGFPGQATRLL 156

Query: 172 LDMRAVYSCESTFESYNVVLETLVTGNCPKVATNVYYDMLSKGISPTVFTFGIVMKALCM 231
           LD+++VYSCE T  S+NVVL+ LV GNC KVA NV+YDML+KGISP V+TFG+VMKALC+
Sbjct: 157 LDIKSVYSCEPTVRSFNVVLDILVAGNCHKVAPNVFYDMLNKGISPNVYTFGLVMKALCI 216

Query: 232 INEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSKNNQVSEALKLLEEMFVMGCMPDVQT 291
           +NEVDSACSLLRDMTKHGCVPNS+VY TLIHALSK+N+V+EALKLLEEMF+MGC PDVQT
Sbjct: 217 VNEVDSACSLLRDMTKHGCVPNSVVYNTLIHALSKSNRVNEALKLLEEMFLMGCSPDVQT 276

Query: 292 FNDVIHGLCKVNKIQDAAKLVDRMLLRGFNPDSMTYGFLLHGLCRIGKLNEARALLNKIP 351
           FNDVIHGLCK+ +I +A K+VDRMLLRGF PD +TYGFL+ GLC+ G+++EARALL+K+P
Sbjct: 277 FNDVIHGLCKLYRIHEAVKVVDRMLLRGFIPDELTYGFLMQGLCKTGQVDEARALLDKVP 336

Query: 352 CPNNAILNTLINGYVMSGRLKEAQSFLNETMINFGFDPDIFTYNILMHGLCKEGSLGFAR 411
            PN  + NTLINGYV SGR  EA++ + + M++ G  PD+FT+NIL+HGLCK+G LG A 
Sbjct: 337 SPNIVLFNTLINGYVASGRFDEAKAVVYDIMLSIGCKPDVFTFNILIHGLCKKGCLGSAL 396

Query: 412 DLVNEMSRRGCKPNVITYAILIDGLCKAGCLEEAGLVLHEMSTKGLTINTVIYNCLICAL 471
           +LVNEM  +GCKPNVITY+ILIDGLCK G L EAG VL+EMS K +++NTV YN LI AL
Sbjct: 397 ELVNEMEGKGCKPNVITYSILIDGLCKEGRLLEAGDVLNEMSAKEVSLNTVGYNTLISAL 456

Query: 472 CRNEKVHAALNLFREMPTKGCKPDLFTYNSLIFGLCKVDQIDEAFRLFHNLLLDGVVANN 531
           CRN K+  A  +  EM +KGCKPD+FT+NSLIFGLCKVDQ++ A  L+ ++L+ GV+AN 
Sbjct: 457 CRNGKIREAREMLGEMSSKGCKPDIFTFNSLIFGLCKVDQMEAAMGLYRDMLVVGVIANK 516

Query: 532 VTYNTLIHALLRRGAFQEALTLVNDMLFRGCILDKITYNGLIKAFCKAGNVEKGLELYEK 591
           VTYNTLIHA LR G  QEAL LVN+MLFRGC+LD ITYNGLIKA CKAG ++KGL L+E+
Sbjct: 517 VTYNTLIHAFLRNGEIQEALKLVNEMLFRGCLLDAITYNGLIKALCKAGAIDKGLGLFEE 576

Query: 592 MIMDGLNADTISCNILINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVINGLCKVGR 651
           MI  GL   +ISCNIL+NGLCK  KV NA EFLR+ I+RG  PDIVTYNS+INGLCK GR
Sbjct: 577 MIRKGLVPSSISCNILVNGLCKARKVHNALEFLREMIHRGLTPDIVTYNSLINGLCKAGR 636

Query: 652 IREALNLFDRLQVEGVRPDAFTYNTFISWHCKEGMVNDACLFFYRGIENGFVPSNVTWNV 711
           IREAL+LFD+L+VEG+ PDA TYNT ISWHCKEG+ ++ACL  +RG+E GFVP++VTW +
Sbjct: 637 IREALSLFDKLKVEGIYPDAITYNTLISWHCKEGVFDEACLLLHRGVEYGFVPNDVTWFI 696

Query: 712 LVNTLVKQSHENMF 726
           LV+  VK+  +  F
Sbjct: 697 LVSNCVKEGQKESF 710

[Close]
BLAST of CmoCh18G005960 vs. TrEMBL
Match: V4UAI3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030202mg PE=4 SV=1)

HSP 1 Score: 954.9 bits (2467), Expect = 5.7e-275
Identity = 456/716 (63.69%), Postives = 567/716 (79.19%), Query Frame = 1 

Query: 20  PKIINHIENSC------KSSFLAGNIGDGSGCP------TKMNI----ESERETEWESLL 79
           PK+ +H+  +       + SF+  + G  + C       T  +I    +SE E EWE LL
Sbjct: 5   PKLTSHVSKTLFKSLFKRPSFVFFSFGFSNSCTIDYRNCTARSICQSNDSESENEWERLL 64

Query: 80  EPFDLTKLRKSHILITPVQLCKLLELPLDVPTLLEIFERVGAQKGYCHTFDVYYVLINKL 139
           +PFDL +LRKS   ITP QLCKLL LPLDV T +E+F   G+Q+GYCHTFDVYYV I+KL
Sbjct: 65  KPFDLNELRKSLHKITPFQLCKLLRLPLDVDTSMELFTWAGSQEGYCHTFDVYYVFIDKL 124

Query: 140 GTIGEFKVIDKLLTQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYSCEST 199
           G   EFKVID +L QMKEEGI+FRES+F++IMK+YG+ G PGQA RLLLDM++VY C+ T
Sbjct: 125 GANKEFKVIDSVLLQMKEEGIIFRESLFILIMKYYGRGGVPGQATRLLLDMKSVYGCQPT 184

Query: 200 FESYNVVLETLVTGNCPKVATNVYYDMLSKGISPTVFTFGIVMKALCMINEVDSACSLLR 259
           F SYNV L+ LV GNC KVA N++YDMLSKGISPTV+TFG+VMKALCM+NEVDSACSLLR
Sbjct: 185 FRSYNVALDVLVAGNCHKVAPNLFYDMLSKGISPTVYTFGVVMKALCMVNEVDSACSLLR 244

Query: 260 DMTKHGCVPNSIVYQTLIHALSKNNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVN 319
           DMTKHGCVPNS+VYQTLIHALSK+N+VSEAL LLEEM +MGC  DVQTFNDVIHGLCKVN
Sbjct: 245 DMTKHGCVPNSVVYQTLIHALSKSNRVSEALMLLEEMILMGCTSDVQTFNDVIHGLCKVN 304

Query: 320 KIQDAAKLVDRMLLRGFNPDSMTYGFLLHGLCRIGKLNEARALLNKIPCPNNAILNTLIN 379
           +I +AAKLVDRML+RGF PD +TYG L+HGLCR G+++EARALLNKIP  N  +LNT+IN
Sbjct: 305 RIHEAAKLVDRMLVRGFTPDDITYGVLMHGLCRTGRVDEARALLNKIPSANVVLLNTVIN 364

Query: 380 GYVMSGRLKEAQSFLNETMINFGFDPDIFTYNILMHGLCKEGSLGFARDLVNEMSRRGCK 439
           GYV+SGR  EA++   ++M++ G +PD+FT+NIL+HGLCK+  LG A +LVN M+ +GC+
Sbjct: 365 GYVISGRFDEAKAIFYDSMLSVGCNPDVFTFNILIHGLCKQRRLGSALELVNAMAVKGCE 424

Query: 440 PNVITYAILIDGLCKAGCLEEAGLVLHEMSTKGLTINTVIYNCLICALCRNEKVHAALNL 499
           PN++TY IL+DG CK G LE+A ++++EM +KGL++NTV YNCLI ALC   K+  A+ +
Sbjct: 425 PNIVTYTILVDGFCKEGQLEKANIIVNEMLSKGLSLNTVGYNCLIHALCSAGKILEAMEI 484

Query: 500 FREMPTKGCKPDLFTYNSLIFGLCKVDQIDEAFRLFHNLLLDGVVANNVTYNTLIHALLR 559
           F EMP+KGCK D++T+NS+I GLCK D I+EA  L+ ++LL+GV AN VTYNTLIHA LR
Sbjct: 485 FGEMPSKGCKRDIYTFNSIISGLCKGDHIEEALGLYQDMLLEGVTANTVTYNTLIHAFLR 544

Query: 560 RGAFQEALTLVNDMLFRGCILDKITYNGLIKAFCKAGNVEKGLELYEKMIMDGLNADTIS 619
           RG+  EA  LVNDMLFRGC LD+ITYNGLIKA C AG V+KGL L+E+M+  G+   +IS
Sbjct: 545 RGSLHEAHKLVNDMLFRGCPLDEITYNGLIKALCNAGAVDKGLGLFEEMMRKGIKPSSIS 604

Query: 620 CNILINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVINGLCKVGRIREALNLFDRLQ 679
           CNILINGLC+  K + A EFLRD I+RG  PDIVTYNS+INGLCK+G IREALNLFD+LQ
Sbjct: 605 CNILINGLCRTRKANTALEFLRDMIHRGLTPDIVTYNSLINGLCKMGCIREALNLFDKLQ 664

Query: 680 VEGVRPDAFTYNTFISWHCKEGMVNDACLFFYRGIENGFVPSNVTWNVLVNTLVKQ 720
            EG+ PDA TYNT ISWH KEG+ +DA L  ++G+ NGFVP++ TW +LV  LVK+
Sbjct: 665 AEGIYPDAVTYNTLISWHFKEGLFDDAFLILHKGVANGFVPNDATWYILVRNLVKE 720

[Close]
BLAST of CmoCh18G005960 vs. TrEMBL
Match: A0A151U1Y9_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_005937 PE=4 SV=1)

HSP 1 Score: 947.6 bits (2448), Expect = 9.0e-273
Identity = 434/670 (64.78%), Postives = 559/670 (83.43%), Query Frame = 1 

Query: 52  ESERETEWESLLEPFDLTKLRKSHILITPVQLCKLLELPLDVPTLLEIFERVGAQKGYCH 111
           ES+ +TEWE LL+PFDL +LR+S   I+P QLCKLLELPLD+PT LE+F+R GAQKGYCH
Sbjct: 41  ESDTDTEWERLLKPFDLKQLRRSLTPISPSQLCKLLELPLDIPTSLELFQRAGAQKGYCH 100

Query: 112 TFDVYYVLINKLGTIGEFKVIDKLLTQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLL 171
           TFD YY+LI+KLG +G+FK+IDKLL QMKEEGIVF+ES+F++IM++YGKAG PGQA RLL
Sbjct: 101 TFDAYYLLIDKLGAVGDFKLIDKLLKQMKEEGIVFKESLFILIMRYYGKAGLPGQATRLL 160

Query: 172 LDMRAVYSCESTFESYNVVLETLVTGNCPKVATNVYYDMLSKGISPTVFTFGIVMKALCM 231
           LDM  VY+C+ TF+SYNVVLE LV GNCPKVA NV+YDML++G+SPTV TFG+VMKALCM
Sbjct: 161 LDMWGVYACDPTFKSYNVVLEILVDGNCPKVAPNVFYDMLNRGVSPTVLTFGLVMKALCM 220

Query: 232 INEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSKNNQVSEALKLLEEMFVMGCMPDVQT 291
           +NEVDSACSLLRDM KHGCVP+S++YQTLIHAL +N +V+EA++LLE+MF+M C PDVQT
Sbjct: 221 VNEVDSACSLLRDMAKHGCVPSSVIYQTLIHALCENKRVNEAMRLLEDMFLMCCEPDVQT 280

Query: 292 FNDVIHGLCKVNKIQDAAKLVDRMLLRGFNPDSMTYGFLLHGLCRIGKLNEARALLNKIP 351
           FNDVIHGLC+  +I +AAKL+DRML+RGF+ D++TYG+L+ GLC++G+++EARALLNKIP
Sbjct: 281 FNDVIHGLCRAGRIHEAAKLLDRMLVRGFSTDALTYGYLMQGLCKMGQVDEARALLNKIP 340

Query: 352 CPNNAILNTLINGYVMSGRLKEAQSFLNETMINFGFDPDIFTYNILMHGLCKEGSLGFAR 411
            PN  + NTLINGYV SGR +EA+  L   M+  G++PD +T+NI++ GLCK+G L  A 
Sbjct: 341 NPNTVLYNTLINGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLCKKGYLVSAL 400

Query: 412 DLVNEMSRRGCKPNVITYAILIDGLCKAGCLEEAGLVLHEMSTKGLTINTVIYNCLICAL 471
           + ++E+  +G +PNVITY ILI+G CK G LEEA  V++ MS KGL++NTV YNCLICAL
Sbjct: 401 EFLHEVVAKGFEPNVITYTILINGFCKQGRLEEAAEVVNSMSAKGLSLNTVGYNCLICAL 460

Query: 472 CRNEKVHAALNLFREMPTKGCKPDLFTYNSLIFGLCKVDQIDEAFRLFHNLLLDGVVANN 531
           C++EK+  AL LF EMP+KGCKPD++T+NSLI GLCK D++++A  ++H++ L+GV+AN 
Sbjct: 461 CKDEKIEEALQLFGEMPSKGCKPDIYTFNSLIDGLCKNDKMEDALSIYHDMFLEGVIANT 520

Query: 532 VTYNTLIHALLRRGAFQEALTLVNDMLFRGCILDKITYNGLIKAFCKAGNVEKGLELYEK 591
           VTYNTLIHA LRR + Q+A  LV++MLFRGC LD ITY+GLIKA CK G VEKGL L E+
Sbjct: 521 VTYNTLIHAFLRRDSVQQAFKLVDEMLFRGCPLDNITYSGLIKALCKTGAVEKGLGLLEE 580

Query: 592 MIMDGLNADTISCNILINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVINGLCKVGR 651
           M+  G+     SCNILI+ LC+ GKV++A +FL D I+RG  PDIVTYN +INGLCK+G 
Sbjct: 581 MLGKGIFPTVNSCNILISALCRTGKVNDALKFLWDMIHRGLTPDIVTYNCLINGLCKMGH 640

Query: 652 IREALNLFDRLQVEGVRPDAFTYNTFISWHCKEGMVNDACLFFYRGIENGFVPSNVTWNV 711
           ++EALNLF++LQ EG+RPDA TYNT IS HC EGM+NDACL  Y+G+ NGF+P+ +TW++
Sbjct: 641 VQEALNLFNKLQGEGIRPDAITYNTLISRHCHEGMLNDACLILYKGVRNGFIPNEITWSI 700

Query: 712 LVNTLVKQSH 722
           L+N LVK++H
Sbjct: 701 LINYLVKKNH 710

[Close]
BLAST of CmoCh18G005960 vs. TrEMBL
Match: F6I2E5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0592g00020 PE=4 SV=1)

HSP 1 Score: 945.3 bits (2442), Expect = 4.5e-272
Identity = 448/666 (67.27%), Postives = 539/666 (80.93%), Query Frame = 1 

Query: 57  TEWESLLEPFDLTKLRKSHILITPVQLCKLLELPLDVPTLLEIFERVGAQKGYCHTFDVY 116
           TEWE LL+PFDL +LR S   ITP QLCKLLELPLDVPT +E+F+  G QKGYCH FDVY
Sbjct: 55  TEWERLLKPFDLPELRTSLTRITPYQLCKLLELPLDVPTSMELFQWAGTQKGYCHMFDVY 114

Query: 117 YVLINKLGTIGEFKVIDKLLTQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRA 176
           Y+LI+KLG  GEFK  D LL QMK+EGIVFRES+F++IMKHYG+AG PGQA RLLLDMR 
Sbjct: 115 YMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRV 174

Query: 177 VYSCESTFESYNVVLETLVTGNCPKVATNVYYDMLSKGISPTVFTFGIVMKALCMINEVD 236
              C             L+ GNCPKV  NV+Y+MLSKGISPTV+TFG+VMKALC++NEVD
Sbjct: 175 GIGC-------------LLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVD 234

Query: 237 SACSLLRDMTKHGCVPNSIVYQTLIHALSKNNQVSEALKLLEEMFVMGCMPDVQTFNDVI 296
           SAC+LL+DMT+HGCVPN+IVYQTLIHALSK  +V+E LKLLEEM +MGC+PDV TFND I
Sbjct: 235 SACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAI 294

Query: 297 HGLCKVNKIQDAAKLVDRMLLRGFNPDSMTYGFLLHGLCRIGKLNEARALLNKIPCPNNA 356
           HGLCK+ +I +AAKLVDRMLLRGF P+S TYG L+HGLCR+GK++EAR LLNK+P PN  
Sbjct: 295 HGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVV 354

Query: 357 ILNTLINGYVMSGRLKEAQSFLNETMINFGFDPDIFTYNILMHGLCKEGSLGFARDLVNE 416
           + NTLINGYV  GRL EA++ ++E+M++ G  PDIFTYN L+ GLCK+G L  AR+L+NE
Sbjct: 355 LFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNE 414

Query: 417 MSRRGCKPNVITYAILIDGLCKAGCLEEAGLVLHEMSTKGLTINTVIYNCLICALCRNEK 476
           M  +GC+PNVITY ILID  CK G LEEA  VL EMS KGL +N V YNCLI ALC++EK
Sbjct: 415 MQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEK 474

Query: 477 VHAALNLFREMPTKGCKPDLFTYNSLIFGLCKVDQIDEAFRLFHNLLLDGVVANNVTYNT 536
           V  ALN+F +M +KGCKPD+FT+NSLIFGLCKV++ +EA  L+ ++LL+GV+AN +TYNT
Sbjct: 475 VQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNT 534

Query: 537 LIHALLRRGAFQEALTLVNDMLFRGCILDKITYNGLIKAFCKAGNVEKGLELYEKMIMDG 596
           LIHA LRRGA QEAL LVNDMLFRGC LD ITYNGLIKA C+AGN+EKGL L+E M+  G
Sbjct: 535 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 594

Query: 597 LNADTISCNILINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVINGLCKVGRIREAL 656
           LN + ISCNILINGLC+ G + +A EFLRD I+RG  PDIVTYNS+INGLCK GR +EAL
Sbjct: 595 LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 654

Query: 657 NLFDRLQVEGVRPDAFTYNTFISWHCKEGMVNDACLFFYRGIENGFVPSNVTWNVLVNTL 716
           NLFD+LQVEG+ PDA TYNT ISWHCKEGM +DA L   RG+++GF+P+ VTW +LV+  
Sbjct: 655 NLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNF 707

Query: 717 VKQSHE 723
           +K+  +
Sbjct: 715 IKEGDQ 707

[Close]
BLAST of CmoCh18G005960 vs. TAIR10
Match: AT5G64320.1 (AT5G64320.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 839.7 bits (2168), Expect = 1.3e-243
Identity = 399/691 (57.74%), Postives = 523/691 (75.69%), Query Frame = 1 

Query: 29  SCKSSFLAGNIGDGSGCPTKMNIESERETEWESLLEPFDLTKLRKSHILITPVQLCKLLE 88
           S  S F  G   DG G   ++   ++   EWE LL+PFDL  LR S   ITP QL KLLE
Sbjct: 28  SLSSRFSGGGGDDGGGSSPEIG-GTDSANEWEKLLKPFDLDSLRNSFHKITPFQLYKLLE 87

Query: 89  LPLDVPTLLEIFERVGAQKGYCHTFDVYYVLINKLGTIGEFKVIDKLLTQMKEEGIVFRE 148
           LPL+V T +E+F   G+Q GY H+FDVY VLI KLG  GEFK ID+LL QMK+EGIVF+E
Sbjct: 88  LPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKE 147

Query: 149 SIFMIIMKHYGKAGQPGQAIRLLLDMRAVYSCESTFESYNVVLETLVTGNCPKVATNVYY 208
           S+F+ IM+ Y KAG PGQ  RL+L+MR VYSCE TF+SYNVVLE LV+GNC KVA NV+Y
Sbjct: 148 SLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFY 207

Query: 209 DMLSKGISPTVFTFGIVMKALCMINEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSKNN 268
           DMLS+ I PT+FTFG+VMKA C +NE+DSA SLLRDMTKHGCVPNS++YQTLIH+LSK N
Sbjct: 208 DMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCN 267

Query: 269 QVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIQDAAKLVDRMLLRGFNPDSMTYG 328
           +V+EAL+LLEEMF+MGC+PD +TFNDVI GLCK ++I +AAK+V+RML+RGF PD +TYG
Sbjct: 268 RVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYG 327

Query: 329 FLLHGLCRIGKLNEARALLNKIPCPNNAILNTLINGYVMSGRLKEAQSFLNETMINFGFD 388
           +L++GLC+IG+++ A+ L  +IP P   I NTLI+G+V  GRL +A++ L++ + ++G  
Sbjct: 328 YLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIV 387

Query: 389 PDIFTYNILMHGLCKEGSLGFARDLVNEMSRRGCKPNVITYAILIDGLCKAGCLEEAGLV 448
           PD+ TYN L++G  KEG +G A +++++M  +GCKPNV +Y IL+DG CK G ++EA  V
Sbjct: 388 PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 447

Query: 449 LHEMSTKGLTINTVIYNCLICALCRNEKVHAALNLFREMPTKGCKPDLFTYNSLIFGLCK 508
           L+EMS  GL  NTV +NCLI A C+  ++  A+ +FREMP KGCKPD++T+NSLI GLC+
Sbjct: 448 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 507

Query: 509 VDQIDEAFRLFHNLLLDGVVANNVTYNTLIHALLRRGAFQEALTLVNDMLFRGCILDKIT 568
           VD+I  A  L  +++ +GVVAN VTYNTLI+A LRRG  +EA  LVN+M+F+G  LD+IT
Sbjct: 508 VDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEIT 567

Query: 569 YNGLIKAFCKAGNVEKGLELYEKMIMDGLNADTISCNILINGLCKVGKVDNAFEFLRDAI 628
           YN LIK  C+AG V+K   L+EKM+ DG     ISCNILINGLC+ G V+ A EF ++ +
Sbjct: 568 YNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMV 627

Query: 629 NRGFVPDIVTYNSVINGLCKVGRIREALNLFDRLQVEGVRPDAFTYNTFISWHCKEGMVN 688
            RG  PDIVT+NS+INGLC+ GRI + L +F +LQ EG+ PD  T+NT +SW CK G V 
Sbjct: 628 LRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVY 687

Query: 689 DACLFFYRGIENGFVPSNVTWNVLVNTLVKQ 720
           DACL    GIE+GFVP++ TW++L+ +++ Q
Sbjct: 688 DACLLLDEGIEDGFVPNHRTWSILLQSIIPQ 717

[Close]
BLAST of CmoCh18G005960 vs. TAIR10
Match: AT1G74580.1 (AT1G74580.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 335.5 bits (859), Expect = 8.2e-92
Identity = 193/649 (29.74%), Postives = 326/649 (50.23%), Query Frame = 1 

Query: 78  ITPVQLCKLLELPLDVPTLLEIFERVGAQKGYCHTFDVYYVLINKLGTIGEFKVIDKLLT 137
           + P  +  +++   D    LE+F  +  + G+ HT   Y  +I KLG  G+F+ ++++L 
Sbjct: 5   LLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLV 64

Query: 138 QMKEE-GIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYSCESTFESYNVVLETLVT 197
            M+E  G    E +++  MK+YG+ G+  +A+ +   M   Y CE T  SYN ++  LV 
Sbjct: 65  DMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMD-FYDCEPTVFSYNAIMSVLVD 124

Query: 198 GNCPKVATNVYYDMLSKGISPTVFTFGIVMKALCMINEVDSACSLLRDMTKHGCVPNSIV 257
                 A  VY  M  +GI+P V++F I MK+ C  +   +A  LL +M+  GC  N + 
Sbjct: 125 SGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVA 184

Query: 258 YQTLIHALSKNNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIQDAAKLVDRML 317
           Y T++    + N  +E  +L  +M   G    + TFN ++  LCK   +++  KL+D+++
Sbjct: 185 YCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVI 244

Query: 318 LRGFNPDSMTYGFLLHGLCRIGKLNEARALLNKIPCPNNAILNTLINGYVMSGRLKEAQS 377
            RG  P+  TY   + GLC+ G+L+ A   +  + C                        
Sbjct: 245 KRGVLPNLFTYNLFIQGLCQRGELDGA---VRMVGC------------------------ 304

Query: 378 FLNETMINFGFDPDIFTYNILMHGLCKEGSLGFARDLVNEMSRRGCKPNVITYAILIDGL 437
                +I  G  PD+ TYN L++GLCK      A   + +M   G +P+  TY  LI G 
Sbjct: 305 -----LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGY 364

Query: 438 CKAGCLEEAGLVLHEMSTKGLTINTVIYNCLICALCRNEKVHAALNLFREMPTKGCKPDL 497
           CK G ++ A  ++ +    G   +   Y  LI  LC   + + AL LF E   KG KP++
Sbjct: 365 CKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNV 424

Query: 498 FTYNSLIFGLCKVDQIDEAFRLFHNLLLDGVVANNVTYNTLIHALLRRGAFQEALTLVND 557
             YN+LI GL     I EA +L + +   G++    T+N L++ L + G   +A  LV  
Sbjct: 425 ILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKV 484

Query: 558 MLFRGCILDKITYNGLIKAFCKAGNVEKGLELYEKMIMDGLNADTISCNILINGLCKVGK 617
           M+ +G   D  T+N LI  +     +E  LE+ + M+ +G++ D  + N L+NGLCK  K
Sbjct: 485 MISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSK 544

Query: 618 VDNAFEFLRDAINRGFVPDIVTYNSVINGLCKVGRIREALNLFDRLQVEGVRPDAFTYNT 677
            ++  E  +  + +G  P++ T+N ++  LC+  ++ EAL L + ++ + V PDA T+ T
Sbjct: 545 FEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGT 604

Query: 678 FISWHCKEGMVNDACLFFYRGIENGFVPSNV-TWNVLVNTLVKQSHENM 725
            I   CK G ++ A   F +  E   V S+  T+N++++   ++ +  M
Sbjct: 605 LIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTM 620

[Close]
BLAST of CmoCh18G005960 vs. TAIR10
Match: AT3G53700.1 (AT3G53700.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 334.7 bits (857), Expect = 1.4e-91
Identity = 190/640 (29.69%), Postives = 313/640 (48.91%), Query Frame = 1 

Query: 79  TPVQLCKLLELPLDVPTLLEIFERVGAQKGYCHTFDVYYVLINKLGTIGEFKVIDKLLTQ 138
           T V+L   L    D    L +F     +  +     +Y  ++ +LG  G F  + K+L  
Sbjct: 49  TDVKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILED 108

Query: 139 MKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYSCESTFESYNVVLETLVTGN 198
           MK        S F+I+++ Y +     + + ++  M   +  +     YN +L  LV GN
Sbjct: 109 MKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGN 168

Query: 199 CPKVATNVYYDMLSKGISPTVFTFGIVMKALCMINEVDSACSLLRDMTKHGCVPNSIVYQ 258
             K+    +  M   GI P V TF +++KALC  +++  A  +L DM  +G VP+   + 
Sbjct: 169 SLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFT 228

Query: 259 TLIHALSKNNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIQDAAKLVDRMLLR 318
           T++    +   +  AL++ E+M   GC     + N ++HG CK  +++DA   +  M  +
Sbjct: 229 TVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQ 288

Query: 319 -GFNPDSMTYGFLLHGLCRIGKLNEARALLNKIPCPNNAILNTLINGYVMSGRLKEAQSF 378
            GF PD  T+  L++GLC+ G +  A  ++                              
Sbjct: 289 DGFFPDQYTFNTLVNGLCKAGHVKHAIEIM------------------------------ 348

Query: 379 LNETMINFGFDPDIFTYNILMHGLCKEGSLGFARDLVNEMSRRGCKPNVITYAILIDGLC 438
             + M+  G+DPD++TYN ++ GLCK G +  A +++++M  R C PN +TY  LI  LC
Sbjct: 349 --DVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLC 408

Query: 439 KAGCLEEAGLVLHEMSTKGLTINTVIYNCLICALCRNEKVHAALNLFREMPTKGCKPDLF 498
           K   +EEA  +   +++KG+  +   +N LI  LC       A+ LF EM +KGC+PD F
Sbjct: 409 KENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEF 468

Query: 499 TYNSLIFGLCKVDQIDEAFRLFHNLLLDGVVANNVTYNTLIHALLRRGAFQEALTLVNDM 558
           TYN LI  LC   ++DEA  +   + L G   + +TYNTLI    +    +EA  + ++M
Sbjct: 469 TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM 528

Query: 559 LFRGCILDKITYNGLIKAFCKAGNVEKGLELYEKMIMDGLNADTISCNILINGLCKVGKV 618
              G   + +TYN LI   CK+  VE   +L ++MIM+G   D  + N L+   C+ G +
Sbjct: 529 EVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDI 588

Query: 619 DNAFEFLRDAINRGFVPDIVTYNSVINGLCKVGRIREALNLFDRLQVEGVRPDAFTYNTF 678
             A + ++   + G  PDIVTY ++I+GLCK GR+  A  L   +Q++G+      YN  
Sbjct: 589 KKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPV 648

Query: 679 ISWHCKEGMVNDACLFFYRGIE-NGFVPSNVTWNVLVNTL 717
           I    ++    +A   F   +E N   P  V++ ++   L
Sbjct: 649 IQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGL 656

[Close]
BLAST of CmoCh18G005960 vs. TAIR10
Match: AT3G48810.1 (AT3G48810.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 330.5 bits (846), Expect = 2.6e-90
Identity = 200/634 (31.55%), Postives = 330/634 (52.05%), Query Frame = 1 

Query: 63  LEPFDL-TKLRKSHIL--------ITPVQLCKLLELPLDVPTLLEIFERVGAQKGYCHTF 122
           L PF L T L  +H+L        I  + + K L     VP  L  F+ +     + HT 
Sbjct: 17  LIPFVLNTNLNVNHLLTESPNHAEIKELDVVKRLRQESCVPLALHFFKSIANSNLFKHTP 76

Query: 123 DVYYVLINKLGTIGEFKVIDKLLTQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLD 182
             + V+I KL   G+   +  LL QMK +G    E +F+ ++  Y + G   +A+ +   
Sbjct: 77  LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 136

Query: 183 MRAVYSCESTFESYNVVLETLVTGNCPKVATNVYYDMLSKGISPTVFTFGIVMKALCMIN 242
           ++  + C+ + + YN VL+TL+  N  ++   VY DM   G  P VFT+ +++KALC  N
Sbjct: 137 IKE-FGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNN 196

Query: 243 EVDSACSLLRDMTKHGCVPNSIVYQTLIHALSKNNQVSEALKLLEEMFVMGCMPDVQTFN 302
           +VD A  LL +M+  GC P+++ Y T+I ++ +   V E  +L E        P V  +N
Sbjct: 197 KVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF-----EPVVSVYN 256

Query: 303 DVIHGLCKVNKIQDAAKLVDRMLLRGFNPDSMTYGFLLHGLCRIGKLNEARALLNKI--- 362
            +I+GLCK +  + A +L+  M+ +G +P+ ++Y  L++ LC  G++  A + L ++   
Sbjct: 257 ALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKR 316

Query: 363 PC-PNNAILNTLINGYVMSGRLKEAQSFLNETMINFGFDPDIFTYNILMHGLCKEGSLGF 422
            C PN   L++L+ G  + G   +A    N+ +  FG  P++  YN L+ G C  G++  
Sbjct: 317 GCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVK 376

Query: 423 ARDLVNEMSRRGCKPNVITYAILIDGLCKAGCLEEAGLVLHEMSTKGLTINTVIYNCLIC 482
           A  + + M   GC PN+ TY  LI+G  K G L+ A  + ++M T G   N V+Y  ++ 
Sbjct: 377 AVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVE 436

Query: 483 ALCRNEKVHAALNLFREMPTKGCKPDLFTYNSLIFGLCKVDQIDEAFRLFHNL-LLDGVV 542
           ALCR+ K   A +L   M  + C P + T+N+ I GLC   ++D A ++F  +       
Sbjct: 437 ALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCP 496

Query: 543 ANNVTYNTLIHALLRRGAFQEALTLVNDMLFRGCILDKITYNGLIKAFCKAGNVEKGLEL 602
            N VTYN L+  L +    +EA  L  ++  RG      TYN L+   C AG     L+L
Sbjct: 497 PNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQL 556

Query: 603 YEKMIMDGLNADTISCNILINGLCKVGKVDNAFEFLRDAIN---RGFVPDIVTYNSVING 662
             KM++DG + D I+ N++I   CK GK + A + L D ++   R + PD+++Y +VI G
Sbjct: 557 VGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML-DLVSCGRRKWRPDVISYTNVIWG 616

Query: 663 LCKVGRIREALNLFDRLQVEGVRPDAFTYNTFIS 680
           LC+     + + L +R+   G+ P   T++  I+
Sbjct: 617 LCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643

[Close]
BLAST of CmoCh18G005960 vs. TAIR10
Match: AT1G63080.1 (AT1G63080.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 318.5 bits (815), Expect = 1.0e-86
Identity = 165/476 (34.66%), Postives = 267/476 (56.09%), Query Frame = 1 

Query: 214 GISPTVFTFGIVMKALCMINEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSKNNQVSEA 273
           G+S  ++T+ I++  LC  +++  A ++L  M K G  P+ +   +L++     N++SEA
Sbjct: 95  GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154

Query: 274 LKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIQDAAKLVDRMLLRGFNPDSMTYGFLLHG 333
           + L+++M  MG  PD  TF  ++HGL + NK  +A  LV+RM+++G  PD +TYG +++G
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 214

Query: 334 LCRIGKLNEARALLNKIPC----PNNAILNTLINGYVMSGRLKEAQSFLNETMINFGFDP 393
           LC+ G+ + A  LLNK+       +  I +T+I+       + +A +   E M N G  P
Sbjct: 215 LCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTE-MDNKGIRP 274

Query: 394 DIFTYNILMHGLCKEGSLGFARDLVNEMSRRGCKPNVITYAILIDGLCKAGCLEEAGLVL 453
           D+FTY+ L+  LC  G    A  L+++M  R   PNV+T+  LID   K G L EA  + 
Sbjct: 275 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 334

Query: 454 HEMSTKGLTINTVIYNCLICALCRNEKVHAALNLFREMPTKGCKPDLFTYNSLIFGLCKV 513
            EM  + +  N V YN LI   C ++++  A  +F  M +K C PD+ TYN+LI G CK 
Sbjct: 335 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 394

Query: 514 DQIDEAFRLFHNLLLDGVVANNVTYNTLIHALLRRGAFQEALTLVNDMLFRGCILDKITY 573
            ++ +   LF ++   G+V N VTY TLIH   +      A  +   M+  G   + +TY
Sbjct: 395 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 454

Query: 574 NGLIKAFCKAGNVEKGLELYEKMIMDGLNADTISCNILINGLCKVGKVDNAFEFLRDAIN 633
           N L+   CK G +EK + ++E +    +  D  + NI+  G+CK GKV++ ++       
Sbjct: 455 NTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSL 514

Query: 634 RGFVPDIVTYNSVINGLCKVGRIREALNLFDRLQVEGVRPDAFTYNTFISWHCKEG 686
           +G  PD++ YN++I+G CK G   EA  LF +++ +G  PD+ TYNT I  H ++G
Sbjct: 515 KGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDG 569

[Close]
BLAST of CmoCh18G005960 vs. NCBI nr
Match: gi|659127266|ref|XP_008463614.1| (PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like [Cucumis melo])

HSP 1 Score: 1337.4 bits (3460), Expect = 0.0e+00
Identity = 652/731 (89.19%), Postives = 688/731 (94.12%), Query Frame = 1 

Query: 1   MYTSFGNIVKRTKNLCSLEPKIINHIENSCKSSFLAGNIGDGSGCPTKMNIESERETEWE 60
           M++SF NIVKRTK+L SLE KII   ENSCK+SFLAGNIGDGS   TKM++E E ETEWE
Sbjct: 1   MFSSFRNIVKRTKSLSSLESKIIILFENSCKASFLAGNIGDGSDA-TKMSVEPELETEWE 60

Query: 61  SLLEPFDLTKLRKSHILITPVQLCKLLELPLDVPTLLEIFERVGAQKGYCHTFDVYYVLI 120
           SLLEPFDLTKLR+S I ITPVQLCKLLELPLDVPTL EIF+RVG QKGYCHTFDVYYV I
Sbjct: 61  SLLEPFDLTKLRESRIRITPVQLCKLLELPLDVPTLSEIFDRVGGQKGYCHTFDVYYVFI 120

Query: 121 NKLGTIGEFKVIDKLLTQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYSC 180
           NKLGT+G+FKVIDKLL QMKEEGIVF+ESIFMIIMKHYGKAGQPGQAIRLLLDMRAVY C
Sbjct: 121 NKLGTVGQFKVIDKLLMQMKEEGIVFQESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLC 180

Query: 181 ESTFESYNVVLETLVTGNCPKVATNVYYDMLSKGISPTVFTFGIVMKALCMINEVDSACS 240
           E TF+SYNVVLE LVTGNCP+VATNV+YDMLSKG+SPTVFTFGIVMKALCM+NEVDSACS
Sbjct: 181 EPTFKSYNVVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMVNEVDSACS 240

Query: 241 LLRDMTKHGCVPNSIVYQTLIHALSKNNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLC 300
           LLRDMTKHGCVPNSIVYQTLIHALS+ NQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLC
Sbjct: 241 LLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLC 300

Query: 301 KVNKIQDAAKLVDRMLLRGFNPDSMTYGFLLHGLCRIGKLNEARALLNKIPCPNNAILNT 360
           KVNKI DA KLVDRMLLRGFNPD+MTYGFLLHGLCRIGKLNEAR +  KIPCPNNAILNT
Sbjct: 301 KVNKIHDATKLVDRMLLRGFNPDNMTYGFLLHGLCRIGKLNEARTIFKKIPCPNNAILNT 360

Query: 361 LINGYVMSGRLKEAQSFLNETMINFGFDPDIFTYNILMHGLCKEGSLGFARDLVNEMSRR 420
           LINGYVMSG+LKEAQ+FLNETMINFGF PDIFTYNILMHGLCKEGSL FARDLVNEMSRR
Sbjct: 361 LINGYVMSGQLKEAQNFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRR 420

Query: 421 GCKPNVITYAILIDGLCKAGCLEEAGLVLHEMSTKGLTINTVIYNCLICALCRNEKVHAA 480
           GC+PNVITYAIL+DGLCKAG LEEAGLVLHEMST+GLTIN+VIYNCLICALCRNEKVH A
Sbjct: 421 GCEPNVITYAILVDGLCKAGLLEEAGLVLHEMSTRGLTINSVIYNCLICALCRNEKVHVA 480

Query: 481 LNLFREMPTKGCKPDLFTYNSLIFGLCKVDQIDEAFRLFHNLLLDGVVANNVTYNTLIHA 540
           LNL  EM TKGCKPDLFTYNSLI+GLCKVD+IDEAFRLFHN+LLDG VANNVTYNTLIHA
Sbjct: 481 LNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHA 540

Query: 541 LLRRGAFQEALTLVNDMLFRGCILDKITYNGLIKAFCKAGNVEKGLELYEKMIMDGLNAD 600
           LLRRGAFQ+ALTLVNDMLFRGC LDKITYNGLIKAFCK GNVEKGLELYE+MIMDGL AD
Sbjct: 541 LLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNVEKGLELYEQMIMDGLGAD 600

Query: 601 TISCNILINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVINGLCKVGRIREALNLFD 660
           TISCNI+INGLCKVGKVD AFEFLRDAINRGFVPDIVTYNSV+NGLCKVGRI+EALNLFD
Sbjct: 601 TISCNIMINGLCKVGKVDRAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFD 660

Query: 661 RLQVEGVRPDAFTYNTFISWHCKEGMVNDACLFFYRGIENGFVPSNVTWNVLVNTLVKQS 720
           RLQVEGVRPDAFTYNTFISWHCKEGMVNDACLFF RGIENGFVPSN+TWNVLV TLVKQS
Sbjct: 661 RLQVEGVRPDAFTYNTFISWHCKEGMVNDACLFFXRGIENGFVPSNLTWNVLVYTLVKQS 720

Query: 721 H-ENMFFVSDE 731
           + EN+FF S E
Sbjct: 721 NQENLFFASYE 730

[Close]
BLAST of CmoCh18G005960 vs. NCBI nr
Match: gi|449443698|ref|XP_004139614.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g64320, mitochondrial [Cucumis sativus])

HSP 1 Score: 1335.5 bits (3455), Expect = 0.0e+00
Identity = 653/731 (89.33%), Postives = 687/731 (93.98%), Query Frame = 1 

Query: 1   MYTSFGNIVKRTKNLCSLEPKIINHIENSCKSSFLAGNIGDGSGCPTKMNIESERETEWE 60
           M++SF NIVKRTK+L S E KII   ENSCK+SFLAGNIGDGS  P KMN+ESE  TEWE
Sbjct: 1   MFSSFRNIVKRTKSLSSSESKIIILFENSCKASFLAGNIGDGSD-PIKMNVESEPATEWE 60

Query: 61  SLLEPFDLTKLRKSHILITPVQLCKLLELPLDVPTLLEIFERVGAQKGYCHTFDVYYVLI 120
           SLLEPFDLTKLRKSHILITPVQLCKLLELPLDVPTLLEIFERVG QKGYCHTFDVYYV I
Sbjct: 61  SLLEPFDLTKLRKSHILITPVQLCKLLELPLDVPTLLEIFERVGGQKGYCHTFDVYYVFI 120

Query: 121 NKLGTIGEFKVIDKLLTQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYSC 180
           NKLG IG+FK+IDKLL QMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVY C
Sbjct: 121 NKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLC 180

Query: 181 ESTFESYNVVLETLVTGNCPKVATNVYYDMLSKGISPTVFTFGIVMKALCMINEVDSACS 240
           E TF+SY++VLE LVTGNCP+VATNV+YDMLSKG+SPTVFTFGIVMKALCM NEVDSACS
Sbjct: 181 EPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACS 240

Query: 241 LLRDMTKHGCVPNSIVYQTLIHALSKNNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLC 300
           LLRDMTKHGCVPNSIVYQTLIHALS+ NQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLC
Sbjct: 241 LLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLC 300

Query: 301 KVNKIQDAAKLVDRMLLRGFNPDSMTYGFLLHGLCRIGKLNEARALLNKIPCPNNAILNT 360
           KVNKI DA KLVDRMLLRGF PD+MTYGFLLHGLCRIGKLNEAR +L KIPCPNNAILNT
Sbjct: 301 KVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNT 360

Query: 361 LINGYVMSGRLKEAQSFLNETMINFGFDPDIFTYNILMHGLCKEGSLGFARDLVNEMSRR 420
           LINGYVMSG+LKEAQSFLNETMINFGF PDIFTYNILMHGLCKEGSL FARDLVNEMSRR
Sbjct: 361 LINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRR 420

Query: 421 GCKPNVITYAILIDGLCKAGCLEEAGLVLHEMSTKGLTINTVIYNCLICALCRNEKVHAA 480
           GC+PNVITYAIL++GLCKAG LEEAGLVLHEMS +GLTIN+VIYNCLICALCR EKVH A
Sbjct: 421 GCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVA 480

Query: 481 LNLFREMPTKGCKPDLFTYNSLIFGLCKVDQIDEAFRLFHNLLLDGVVANNVTYNTLIHA 540
           LNL  EM TKGCKPDLFTYNSLI+GLCKVD+IDEAFRLFHN+LLDG VANNVTYNTLIHA
Sbjct: 481 LNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHA 540

Query: 541 LLRRGAFQEALTLVNDMLFRGCILDKITYNGLIKAFCKAGNVEKGLELYEKMIMDGLNAD 600
           LLRRGAFQ+ALTLVNDMLFRGC LDKITYNGLIKAFCK GN+EKGLELYE+MIMDGL AD
Sbjct: 541 LLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGAD 600

Query: 601 TISCNILINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVINGLCKVGRIREALNLFD 660
           TISCNI+INGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSV+NGLCKVGRI+EALNLFD
Sbjct: 601 TISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFD 660

Query: 661 RLQVEGVRPDAFTYNTFISWHCKEGMVNDACLFFYRGIENGFVPSNVTWNVLVNTLVKQS 720
           RLQVEGVRPDAFTYNTFISW CKEGMVNDACLFFYRGIENGFVPSN+TWNVLV TL+KQS
Sbjct: 661 RLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQS 720

Query: 721 H-ENMFFVSDE 731
           + EN FFV DE
Sbjct: 721 NQENNFFVLDE 730

[Close]
BLAST of CmoCh18G005960 vs. NCBI nr
Match: gi|645242231|ref|XP_008227454.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g64320, mitochondrial isoform X1 [Prunus mume])

HSP 1 Score: 1008.4 bits (2606), Expect = 6.2e-291
Identity = 484/697 (69.44%), Postives = 576/697 (82.64%), Query Frame = 1 

Query: 26  IENSCKSSFLAGNIGDGSGCPTKMNIESERETEWESLLEPFDLTKLRKSHILITPVQLCK 85
           ++  C + F AG + D S      N  SE E EWE LL+PFDL +LRKS + ITP+QLCK
Sbjct: 19  LKTHCFAIFSAGYVTDTSDRVLNTN-GSESENEWEKLLKPFDLNELRKSLVQITPIQLCK 78

Query: 86  LLELPLDVPTLLEIFERVGAQKGYCHTFDVYYVLINKLGTIGEFKVIDKLLTQMKEEGIV 145
           LLELPLDVPT +EIFE VGAQKGY H+FDVYYVLI+KLG  GEFKVID+LL Q+ EEGIV
Sbjct: 79  LLELPLDVPTSMEIFELVGAQKGYWHSFDVYYVLIDKLGAAGEFKVIDRLLMQIMEEGIV 138

Query: 146 FRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYSCESTFESYNVVLETLVTGNCPKVATN 205
           FRES+F++IMKHYG+AG PGQA RLLLDMR VYSCE TF SYNVVL+ LV GNCPKVA N
Sbjct: 139 FRESLFIMIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDILVAGNCPKVAPN 198

Query: 206 VYYDMLSKGISPTVFTFGIVMKALCMINEVDSACSLLRDMTKHGCVPNSIVYQTLIHALS 265
           V+YDMLS+GISP V+TFG+V+KALCM+NEVD+ACSLLRDMTKHGCVPNS+VYQTLIHALS
Sbjct: 199 VFYDMLSRGISPNVYTFGVVLKALCMVNEVDTACSLLRDMTKHGCVPNSVVYQTLIHALS 258

Query: 266 KNNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIQDAAKLVDRMLLRGFNPDSM 325
           KNNQV+EAL+LLEEMF+MGC PDVQTFND+IH  CKVN+  +AA+LVDRMLLRGF PD +
Sbjct: 259 KNNQVNEALRLLEEMFLMGCTPDVQTFNDIIHAFCKVNRTHEAARLVDRMLLRGFTPDYV 318

Query: 326 TYGFLLHGLCRIGKLNEARALLNKIPCPNNAILNTLINGYVMSGRLKEAQSFLNETMINF 385
           TYG L+HGLCR G++ EARALLNK+P PN  + NTLINGYVMSGR  EA+  L + M+  
Sbjct: 319 TYGVLMHGLCRTGQVEEARALLNKVPSPNIVLFNTLINGYVMSGRFDEAKVVLYDGMLGS 378

Query: 386 GFDPDIFTYNILMHGLCKEGSLGFARDLVNEMSRRGCKPNVITYAILIDGLCKAGCLEEA 445
           G +PD++ +NIL+HGLCK+G LG AR+LVNEM  +GCKPNVITY ILIDG CK G LEE 
Sbjct: 379 GCEPDVYAFNILIHGLCKKGRLGSARELVNEMEIKGCKPNVITYTILIDGFCKEGQLEET 438

Query: 446 GLVLHEMSTKGLTINTVIYNCLICALCRNEKVHAALNLFREMPTKGCKPDLFTYNSLIFG 505
           G VL+EMS KGL++N V YN LI ALC++ KVH AL LF E+ +  CKPD+FT+NSLI+G
Sbjct: 439 GDVLNEMSYKGLSLNIVGYNRLISALCKDGKVHEALKLFSEISSNECKPDIFTFNSLIYG 498

Query: 506 LCKVDQIDEAFRLFHNLLLDGVVANNVTYNTLIHALLRRGAFQEALTLVNDMLFRGCILD 565
           LCKVD+++EA  L+ +++L+GV+AN VTYNTLI+A L RGA QEAL LVN+MLFRGC LD
Sbjct: 499 LCKVDKMEEALGLYRDMVLEGVIANTVTYNTLINAFLTRGAIQEALKLVNEMLFRGCPLD 558

Query: 566 KITYNGLIKAFCKAGNVEKGLELYEKMIMDGLNADTISCNILINGLCKVGKVDNAFEFLR 625
           KITYNGLIKA CKAG VEK   L+E+MIM GL+ ++ISCNILINGLC+ GKV +A EFLR
Sbjct: 559 KITYNGLIKALCKAGAVEKARGLFEEMIMKGLHPNSISCNILINGLCRSGKVYDALEFLR 618

Query: 626 DAINRGFVPDIVTYNSVINGLCKVGRIREALNLFDRLQVEGVRPDAFTYNTFISWHCKEG 685
           D I+RG +PDIVTYNS+INGLCK+GRI EALNLFDRLQVEG+ PD  TYNT ISW+CKEG
Sbjct: 619 DMIHRGLMPDIVTYNSLINGLCKLGRISEALNLFDRLQVEGMCPDVITYNTLISWYCKEG 678

Query: 686 MVNDACLFFYRGIENGFVPSNVTWNVLVNTLVKQSHE 723
           M+ DACL   RG+ NG VP+++TW +LV+ L K+  E
Sbjct: 679 MIYDACLLLNRGVNNGLVPNHLTWYILVSNLSKERDE 714

[Close]
BLAST of CmoCh18G005960 vs. NCBI nr
Match: gi|657950809|ref|XP_008349764.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g64320, mitochondrial [Malus domestica])

HSP 1 Score: 995.0 bits (2571), Expect = 7.1e-287
Identity = 471/676 (69.67%), Postives = 572/676 (84.62%), Query Frame = 1 

Query: 53  SERETEWESLLEPFDLTKLRKSHILITPVQLCKLLELPLDVPTLLEIFERVGAQKGYCHT 112
           SE E EWE +L+PFDL +LRKS + ITP+QLCKLL+LPLDVP+ +EIFE VGAQKGYCH+
Sbjct: 45  SESENEWEKILKPFDLNELRKSLVQITPIQLCKLLQLPLDVPSSMEIFELVGAQKGYCHS 104

Query: 113 FDVYYVLINKLGTIGEFKVIDKLLTQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLL 172
           FDVYYVLI+KLG  GEFK+ID+LL Q+KE+G  F ES+F++IMK+YG+AG PGQA RLLL
Sbjct: 105 FDVYYVLIDKLGAAGEFKIIDRLLMQIKEKGFNFSESLFIMIMKYYGRAGLPGQATRLLL 164

Query: 173 DMRAVYSCESTFESYNVVLETLVTGNCPKVATNVYYDMLSKGISPTVFTFGIVMKALCMI 232
           DMR VYSCE TF SYNVVL+ LV GNCPKVA NV+YDMLS+GISP V+TFG+V+KALCM+
Sbjct: 165 DMRGVYSCEPTFRSYNVVLDILVAGNCPKVAPNVFYDMLSRGISPNVYTFGVVLKALCMV 224

Query: 233 NEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSKNNQVSEALKLLEEMFVMGCMPDVQTF 292
           NEVDSACSLL+DMTKHGCVPNS+VYQTLIHALSKNNQV+EAL+LLEEMF+MGC PDVQTF
Sbjct: 225 NEVDSACSLLKDMTKHGCVPNSVVYQTLIHALSKNNQVNEALRLLEEMFLMGCTPDVQTF 284

Query: 293 NDVIHGLCKVNKIQDAAKLVDRMLLRGFNPDSMTYGFLLHGLCRIGKLNEARALLNKIPC 352
           ND+IHGLCKVN+I +AA+LVDRML+RGF PD +TYG L+HGLCR G+++EARALLNK+P 
Sbjct: 285 NDIIHGLCKVNRIHEAARLVDRMLVRGFTPDDVTYGVLMHGLCRTGQVDEARALLNKVPS 344

Query: 353 PNNAILNTLINGYVMSGRLKEAQSFLNETMINFGFDPDIFTYNILMHGLCKEGSLGFARD 412
           PN  + NTLINGYVMSGR  EA++ L + M+  G +PD++T+NIL+HGLCK+G L  AR+
Sbjct: 345 PNIVLFNTLINGYVMSGRFDEAKAVLYDGMLGNGCNPDVYTFNILIHGLCKKGCLSSARE 404

Query: 413 LVNEMSRRGCKPNVITYAILIDGLCKAGCLEEAGLVLHEMSTKGLTINTVIYNCLICALC 472
           LV+EM  +GCKPNVITY I+IDG CK G LEEAG VL+EMS KGL++NTV YN LI ALC
Sbjct: 405 LVSEMEIKGCKPNVITYTIMIDGFCKEGQLEEAGDVLNEMSYKGLSLNTVGYNRLISALC 464

Query: 473 RNEKVHAALNLFREMPTKGCKPDLFTYNSLIFGLCKVDQIDEAFRLFHNLLLDGVVANNV 532
           ++ KV  AL LF E+ +KGCKPD+FT++SLIFGLCKVDQ++EA  L+ ++LL+GVVAN V
Sbjct: 465 KDGKVQEALKLFCEISSKGCKPDVFTFSSLIFGLCKVDQMEEALGLYRDMLLEGVVANTV 524

Query: 533 TYNTLIHALLRRGAFQEALTLVNDMLFRGCILDKITYNGLIKAFCKAGNVEKGLELYEKM 592
           TYNTLI+A L RGA QEAL LVN+M+FRGC LDKITYNGLIKA CKAG VEK   L+E+M
Sbjct: 525 TYNTLINAFLTRGAIQEALKLVNEMVFRGCPLDKITYNGLIKALCKAGAVEKARGLFEEM 584

Query: 593 IMDGLNADTISCNILINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVINGLCKVGRI 652
           +M GL+ D+ISCNILING+C+ GKV +A EFLRD I+ G +PDIVTYNS+INGLCK+G I
Sbjct: 585 MMKGLHPDSISCNILINGMCRSGKVYDALEFLRDMIHXGLMPDIVTYNSLINGLCKMGNI 644

Query: 653 REALNLFDRLQVEGVRPDAFTYNTFISWHCKEGMVNDACLFFYRGIENGFVPSNVTWNVL 712
            EALNLFDRLQ EG+ PD  TYNT ISWHCK+GM++DA L  +RG+ NG +P++ TW +L
Sbjct: 645 CEALNLFDRLQAEGMCPDVITYNTLISWHCKQGMIDDASLLLHRGVNNGLIPNHWTWYIL 704

Query: 713 VNTLVKQSHE-NMFFV 728
           V+ L K+  E N  F+
Sbjct: 705 VSYLSKERGEVNQSFI 720

[Close]
BLAST of CmoCh18G005960 vs. NCBI nr
Match: gi|147798083|emb|CAN67256.1| (hypothetical protein VITISV_039434 [Vitis vinifera])

HSP 1 Score: 979.5 bits (2531), Expect = 3.1e-282
Identity = 460/666 (69.07%), Postives = 552/666 (82.88%), Query Frame = 1 

Query: 57  TEWESLLEPFDLTKLRKSHILITPVQLCKLLELPLDVPTLLEIFERVGAQKGYCHTFDVY 116
           TEWE LL+PFDL +LR S   ITP QLCKLLELPLDVPT +E+F+  G QKGYCH FDVY
Sbjct: 55  TEWERLLKPFDLPELRTSLTRITPYQLCKLLELPLDVPTSMELFQWAGTQKGYCHMFDVY 114

Query: 117 YVLINKLGTIGEFKVIDKLLTQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRA 176
           Y+LI+KLG  GEFK ID LL QMK+EGIVFRES+F++IMKHYG+AG PGQA RLLLDMR 
Sbjct: 115 YMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRG 174

Query: 177 VYSCESTFESYNVVLETLVTGNCPKVATNVYYDMLSKGISPTVFTFGIVMKALCMINEVD 236
           VYSCE TF SYNVVL+ L+ GNCPKV  NV+Y+MLSKGISPTV+TFG+VMKALC++NEVD
Sbjct: 175 VYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVD 234

Query: 237 SACSLLRDMTKHGCVPNSIVYQTLIHALSKNNQVSEALKLLEEMFVMGCMPDVQTFNDVI 296
           SAC+LL+DMT+HGCVPN+IVYQTLIHAL K  +V+E LKLLEEM +MGC+PDV TFND I
Sbjct: 235 SACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAI 294

Query: 297 HGLCKVNKIQDAAKLVDRMLLRGFNPDSMTYGFLLHGLCRIGKLNEARALLNKIPCPNNA 356
           HGLCK+ +I +AAKLVDRMLLRGF P+S TYG L+HGLCR+GK++EAR LLNK+P PN  
Sbjct: 295 HGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVV 354

Query: 357 ILNTLINGYVMSGRLKEAQSFLNETMINFGFDPDIFTYNILMHGLCKEGSLGFARDLVNE 416
           + NTLINGYV  GRL EA++ ++E+M++ G  PDIFTYN L+ GLCK+G L  AR+L+NE
Sbjct: 355 LFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNE 414

Query: 417 MSRRGCKPNVITYAILIDGLCKAGCLEEAGLVLHEMSTKGLTINTVIYNCLICALCRNEK 476
           M  +GC+PNVITY ILID  CK G LEEA  VL EMS KGL +N V YNCLI ALC++EK
Sbjct: 415 MQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEK 474

Query: 477 VHAALNLFREMPTKGCKPDLFTYNSLIFGLCKVDQIDEAFRLFHNLLLDGVVANNVTYNT 536
           V  ALN+F +M +KGCKPD+FT+NSLIFGLCKV++ +EA  L+ ++LL+GV+AN +TYNT
Sbjct: 475 VQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNT 534

Query: 537 LIHALLRRGAFQEALTLVNDMLFRGCILDKITYNGLIKAFCKAGNVEKGLELYEKMIMDG 596
           LIHA LRRGA QEAL LVNDMLFRGC LD ITYNGLIKA C+AGN+EKGL L+E M+  G
Sbjct: 535 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 594

Query: 597 LNADTISCNILINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVINGLCKVGRIREAL 656
           LN + ISCNILINGLC+ G + +A EFLRD I+RG  PDIVTYNS+INGLCK GR +EAL
Sbjct: 595 LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 654

Query: 657 NLFDRLQVEGVRPDAFTYNTFISWHCKEGMVNDACLFFYRGIENGFVPSNVTWNVLVNTL 716
           NLFD+LQVEG+ PDA TYNT ISWHCKEGM +DA L   RG+++GF+P+ VTW +LV+  
Sbjct: 655 NLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNF 714

Query: 717 VKQSHE 723
           +K+  +
Sbjct: 715 IKEGDQ 720

The following BLAST results are available for this feature:
BLAST of CmoCh18G005960 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP444_ARATH2.4e-24257.74Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop... [more]
PP120_ARATH1.5e-9029.74Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis th... [more]
PP281_ARATH2.5e-9029.69Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... [more]
PP270_ARATH4.7e-8931.55Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana GN... [more]
PPR98_ARATH1.8e-8534.66Pentatricopeptide repeat-containing protein At1g63080, mitochondrial OS=Arabidop... [more]
BLAST of CmoCh18G005960 vs. TrEMBL
Match NameE-valueIdentityDescription
A5AXD2_VITVI2.1e-28269.07Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039434 PE=4 SV=1[more]
A0A061GXN1_THECC4.8e-28268.69Pentatricopeptide repeat-containing protein, putative isoform 1 OS=Theobroma cac... [more]
V4UAI3_9ROSI5.7e-27563.69Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030202mg PE=4 SV=1[more]
A0A151U1Y9_CAJCA9.0e-27364.78Uncharacterized protein OS=Cajanus cajan GN=KK1_005937 PE=4 SV=1[more]
F6I2E5_VITVI4.5e-27267.27Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0592g00020 PE=4 SV=... [more]
BLAST of CmoCh18G005960 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G64320.11.3e-24357.74 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G74580.18.2e-9229.74 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G53700.11.4e-9129.69 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G48810.12.6e-9031.55 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G63080.11.0e-8634.66 Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of CmoCh18G005960 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659127266|ref|XP_008463614.1|0.0e+0089.19PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g... [more]
gi|449443698|ref|XP_004139614.1|0.0e+0089.33PREDICTED: pentatricopeptide repeat-containing protein At5g64320, mitochondrial ... [more]
gi|645242231|ref|XP_008227454.1|6.2e-29169.44PREDICTED: pentatricopeptide repeat-containing protein At5g64320, mitochondrial ... [more]
gi|657950809|ref|XP_008349764.1|7.1e-28769.67PREDICTED: pentatricopeptide repeat-containing protein At5g64320, mitochondrial ... [more]
gi|147798083|emb|CAN67256.1|3.1e-28269.07hypothetical protein VITISV_039434 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh18G005960.1CmoCh18G005960.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 358..380
score: 0
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 595..626
score: 3.8E-10coord: 318..349
score: 5.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 530..578
score: 5.9E-16coord: 460..508
score: 4.0E-18coord: 252..301
score: 2.9E-14coord: 186..230
score: 1.8E-7coord: 634..678
score: 2.3E-15coord: 389..438
score: 1.8
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 497..530
score: 3.0E-6coord: 462..495
score: 2.2E-10coord: 220..254
score: 5.0E-7coord: 532..565
score: 3.1E-7coord: 672..705
score: 4.5E-6coord: 291..324
score: 1.4E-6coord: 427..460
score: 1.1E-7coord: 602..636
score: 3.2E-8coord: 567..600
score: 1.6E-9coord: 637..671
score: 2.3E-10coord: 392..426
score: 4.0E-11coord: 256..289
score: 1.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 112..146
score: 7.015coord: 635..669
score: 14.074coord: 147..177
score: 6.467coord: 425..459
score: 11.246coord: 183..217
score: 8.342coord: 354..389
score: 10.271coord: 495..529
score: 11.29coord: 253..287
score: 11.751coord: 390..424
score: 13.504coord: 565..599
score: 12.595coord: 530..564
score: 11.224coord: 323..353
score: 8.199coord: 218..252
score: 10.556coord: 460..494
score: 13.011coord: 600..634
score: 12.2coord: 670..704
score: 10.556coord: 288..322
score: 11
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 533..661
score: 1.9E-7coord: 256..340
score: 1.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 161..711
score: 2.7E-271coord: 61..92
score: 2.7E
NoneNo IPR availablePANTHERPTHR24015:SF905SUBFAMILY NOT NAMEDcoord: 61..92
score: 2.7E-271coord: 161..711
score: 2.7E
NoneNo IPR availableunknownSSF81901HCP-likecoord: 476..662
score: 3.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh18G005960Cucsa.180460Cucumber (Gy14) v1cgycmoB0514
CmoCh18G005960CmaCh18G005980Cucurbita maxima (Rimu)cmacmoB411
CmoCh18G005960Cla009037Watermelon (97103) v1cmowmB381
CmoCh18G005960MELO3C025546Melon (DHL92) v3.5.1cmomeB349
CmoCh18G005960CSPI01G15810Wild cucumber (PI 183967)cmocpiB385
CmoCh18G005960Lsi02G011220Bottle gourd (USVL1VR-Ls)cmolsiB359
CmoCh18G005960CsaV3_1G017070Cucumber (Chinese Long) v3cmocucB0459
CmoCh18G005960CsaV3_UNG047340Cucumber (Chinese Long) v3cmocucB0496
CmoCh18G005960Cla97C01G010370Watermelon (97103) v2cmowmbB384
CmoCh18G005960Bhi08G000634Wax gourdcmowgoB0521
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh18G005960CmoCh13G004060Cucurbita moschata (Rifu)cmocmoB170
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh18G005960Watermelon (97103) v2cmowmbB380
CmoCh18G005960Cucurbita moschata (Rifu)cmocmoB168
CmoCh18G005960Cucurbita maxima (Rimu)cmacmoB222
CmoCh18G005960Cucurbita maxima (Rimu)cmacmoB223
CmoCh18G005960Cucurbita maxima (Rimu)cmacmoB407
CmoCh18G005960Cucumber (Chinese Long) v2cmocuB382
CmoCh18G005960Watermelon (Charleston Gray)cmowcgB342
CmoCh18G005960Watermelon (Charleston Gray)cmowcgB345
CmoCh18G005960Watermelon (97103) v1cmowmB378
CmoCh18G005960Cucurbita pepo (Zucchini)cmocpeB375
CmoCh18G005960Cucurbita pepo (Zucchini)cmocpeB403
CmoCh18G005960Bottle gourd (USVL1VR-Ls)cmolsiB357
CmoCh18G005960Cucumber (Gy14) v2cgybcmoB084
CmoCh18G005960Melon (DHL92) v3.6.1cmomedB410
CmoCh18G005960Silver-seed gourdcarcmoB0063
CmoCh18G005960Silver-seed gourdcarcmoB1391