CsaV3_1G014990 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAAAGGGGTTGTTTCATAAACCTTCCCCTTCTCGTGATAGTCGTAGGAAACTTGATTCTTCGATGTCAAAAGAAAAAGGTCATGCTCCTATGAATACACGATCATCTAGTTTTGAAAGTAGCTCTATTGGGTCCCTACCACATCACAATTCTGATGACTCTGTATTTAATCCATCTGACCATTTGCTCCCCGAATCTGAGGACATTCCTGAGACTGTTGCTTCTGGTGATCATAATGTGTCTATTCGGGCTCCTCTCTCATCTCCTATAAATGACCCAAACCTATCTCAACCTAACCCTGAAGATCTCGTCCAAGCATCGAAACTTAATGTCAAGTCTTCCAAGGGCCTTCCTGTTGTTACCACTAAGACAGGATGCCAAAAGCTTCCCCTCAACATTCCCTCAGTACCTATTGATGGGATTTCTTTCCATCATGAAAAAAATCCTCAAAGGTGGAAGTATGTTGTGCAGCAAAGGATAGCATATGAGGGAAATGTTTCTAACAAATATCAATCATGTGTCAGTGTTATGGATCATATCAGCCAAGCTGGTTTGTCAAGAACTATTCTAAATGTGTGATCTTTCTATCCTAAGTTGATTTAAGAGTTTATTGCCAATCTTCCATCTAACTTTGATGACCCTAGCAGCTCAAATTATCAAACCATTCATGTTCGAGGGACTCAGTTCAACATTTCTCCTTCGGTGATAAATAGGGTTTCTTAGACTAGCTGCTCCTTCTGGTCCCTCATCATCCACACTCTCAAATGAGGAATTAGCATATGTTTAAACTGGAGGAATGCTTACAGTATGGTCTATCAATGGAATTTTGGTTGCATCCTTGAGTTTAAAGTATGCCATTTTACACGAAATTGGAATTGCCAACTGGTTTCCCTCATCCCATGCATCAAGTGTCTCTAATGCTCTTGCTACGTTTTTATATCGAATTAGTACTGAATTGACTTTGGATGCTAGGCTATTTATTTACTTGCAGTTGTTAAGGCATATTGGTACGTTTGGGGTAAAAATTCCACTCGCTCTTCCTCGGTTCTTCTCCAGTTTCTTGCTTCACTTACAACCTGATATTTTAACTAATCTTGATGCTCCGAGCCCAATCCATGCACCTTATTATTGA ATGAAAAAGGGGTTGTTTCATAAACCTTCCCCTTCTCGTGATAGTCGTAGGAAACTTGATTCTTCGATGTCAAAAGAAAAAGGTCATGCTCCTATGAATACACGATCATCTAGTTTTGAAAGTAGCTCTATTGGGTCCCTACCACATCACAATTCTGATGACTCTGTATTTAATCCATCTGACCATTTGCTCCCCGAATCTGAGGACATTCCTGAGACTGTTGCTTCTGGTGATCATAATGTGTCTATTCGGGCTCCTCTCTCATCTCCTATAAATGACCCAAACCTATCTCAACCTAACCCTGAAGATCTCGTCCAAGCATCGAAACTTAATGTCAAGTCTTCCAAGGGCCTTCCTGTTGTTACCACTAAGACAGGATGCCAAAAGCTTCCCCTCAACATTCCCTCAGTACCTATTGATGGGATTTCTTTCCATCATGAAAAAAATCCTCAAAGGTGGAAGTATGTTGTGCAGCAAAGGATAGCATATGAGGGAAATGTTTCTAACAAATATCAATCATGTGTCAGTGTTATGGATCATATCAGCCAAGCTGAGTTTATTGCCAATCTTCCATCTAACTTTGATGACCCTAGCAGCTCAAATTATCAAACCATTCATGTTCGAGGGACTCAGTTCAACATTTCTCCTTCGTTGTTAAGGCATATTGGTACGTTTGGGGTAAAAATTCCACTCGCTCTTCCTCGGTTCTTCTCCAGTTTCTTGCTTCACTTACAACCTGATATTTTAACTAATCTTGATGCTCCGAGCCCAATCCATGCACCTTATTATTGA ATGAAAAAGGGGTTGTTTCATAAACCTTCCCCTTCTCGTGATAGTCGTAGGAAACTTGATTCTTCGATGTCAAAAGAAAAAGGTCATGCTCCTATGAATACACGATCATCTAGTTTTGAAAGTAGCTCTATTGGGTCCCTACCACATCACAATTCTGATGACTCTGTATTTAATCCATCTGACCATTTGCTCCCCGAATCTGAGGACATTCCTGAGACTGTTGCTTCTGGTGATCATAATGTGTCTATTCGGGCTCCTCTCTCATCTCCTATAAATGACCCAAACCTATCTCAACCTAACCCTGAAGATCTCGTCCAAGCATCGAAACTTAATGTCAAGTCTTCCAAGGGCCTTCCTGTTGTTACCACTAAGACAGGATGCCAAAAGCTTCCCCTCAACATTCCCTCAGTACCTATTGATGGGATTTCTTTCCATCATGAAAAAAATCCTCAAAGGTGGAAGTATGTTGTGCAGCAAAGGATAGCATATGAGGGAAATGTTTCTAACAAATATCAATCATGTGTCAGTGTTATGGATCATATCAGCCAAGCTGAGTTTATTGCCAATCTTCCATCTAACTTTGATGACCCTAGCAGCTCAAATTATCAAACCATTCATGTTCGAGGGACTCAGTTCAACATTTCTCCTTCGTTGTTAAGGCATATTGGTACGTTTGGGGTAAAAATTCCACTCGCTCTTCCTCGGTTCTTCTCCAGTTTCTTGCTTCACTTACAACCTGATATTTTAACTAATCTTGATGCTCCGAGCCCAATCCATGCACCTTATTATTGA MKKGLFHKPSPSRDSRRKLDSSMSKEKGHAPMNTRSSSFESSSIGSLPHHNSDDSVFNPSDHLLPESEDIPETVASGDHNVSIRAPLSSPINDPNLSQPNPEDLVQASKLNVKSSKGLPVVTTKTGCQKLPLNIPSVPIDGISFHHEKNPQRWKYVVQQRIAYEGNVSNKYQSCVSVMDHISQAEFIANLPSNFDDPSSSNYQTIHVRGTQFNISPSLLRHIGTFGVKIPLALPRFFSSFLLHLQPDILTNLDAPSPIHAPYY
BLAST of CsaV3_1G014990 vs. NCBI nr
Match: XP_008464590.1 (PREDICTED: uncharacterized protein LOC103502436 [Cucumis melo]) HSP 1 Score: 146.4 bits (368), Expect = 1.4e-31 Identity = 106/327 (32.42%), Postives = 143/327 (43.73%), Query Frame = 0
BLAST of CsaV3_1G014990 vs. NCBI nr
Match: XP_008437685.1 (PREDICTED: uncharacterized protein LOC103483026 [Cucumis melo]) HSP 1 Score: 144.8 bits (364), Expect = 4.1e-31 Identity = 105/303 (34.65%), Postives = 146/303 (48.18%), Query Frame = 0
BLAST of CsaV3_1G014990 vs. NCBI nr
Match: XP_008442272.1 (PREDICTED: uncharacterized protein LOC103486179 [Cucumis melo]) HSP 1 Score: 129.4 bits (324), Expect = 1.8e-26 Identity = 110/366 (30.05%), Postives = 157/366 (42.90%), Query Frame = 0
BLAST of CsaV3_1G014990 vs. NCBI nr
Match: XP_008460264.1 (PREDICTED: uncharacterized protein LOC103499143 [Cucumis melo]) HSP 1 Score: 129.4 bits (324), Expect = 1.8e-26 Identity = 83/195 (42.56%), Postives = 114/195 (58.46%), Query Frame = 0
BLAST of CsaV3_1G014990 vs. NCBI nr
Match: XP_008463460.1 (PREDICTED: uncharacterized protein LOC103501627 [Cucumis melo]) HSP 1 Score: 127.9 bits (320), Expect = 5.2e-26 Identity = 85/249 (34.14%), Postives = 111/249 (44.58%), Query Frame = 0
BLAST of CsaV3_1G014990 vs. TrEMBL
Match: tr|A0A1S3CND8|A0A1S3CND8_CUCME (uncharacterized protein LOC103502436 OS=Cucumis melo OX=3656 GN=LOC103502436 PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 9.3e-32 Identity = 106/327 (32.42%), Postives = 143/327 (43.73%), Query Frame = 0
BLAST of CsaV3_1G014990 vs. TrEMBL
Match: tr|A0A1S3AV82|A0A1S3AV82_CUCME (uncharacterized protein LOC103483026 OS=Cucumis melo OX=3656 GN=LOC103483026 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 2.7e-31 Identity = 105/303 (34.65%), Postives = 146/303 (48.18%), Query Frame = 0
BLAST of CsaV3_1G014990 vs. TrEMBL
Match: tr|A0A1S3B5B5|A0A1S3B5B5_CUCME (uncharacterized protein LOC103486179 OS=Cucumis melo OX=3656 GN=LOC103486179 PE=4 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 1.2e-26 Identity = 110/366 (30.05%), Postives = 157/366 (42.90%), Query Frame = 0
BLAST of CsaV3_1G014990 vs. TrEMBL
Match: tr|A0A1S3CDC6|A0A1S3CDC6_CUCME (uncharacterized protein LOC103499143 OS=Cucumis melo OX=3656 GN=LOC103499143 PE=4 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 1.2e-26 Identity = 83/195 (42.56%), Postives = 114/195 (58.46%), Query Frame = 0
BLAST of CsaV3_1G014990 vs. TrEMBL
Match: tr|A0A1S3CJR8|A0A1S3CJR8_CUCME (uncharacterized protein LOC103501627 OS=Cucumis melo OX=3656 GN=LOC103501627 PE=4 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 3.4e-26 Identity = 85/249 (34.14%), Postives = 111/249 (44.58%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |