CSPI01G14870 (gene) Wild cucumber (PI 183967)

NameCSPI01G14870
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr1 : 10536656 .. 10537171 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAAAAGAAAAAGGTCATGCTCCTATGAATACACGATCATCTAGTTTTGAAAGTAGCTCTATTGGGTCCCTACAACATCACAATTCTGATGACTCTGTATTTAATCCATCTGACCATTTGCTCCCCGAATCTGAGGACATTCCTGAGACTGTTGCTTCTGGTGATCATAATGTGTCTATTCGGGCTCCTCCCTCATCTTCTATAAATGACCCAAACCTATCTCAACCTAACCCTGAAGATCTCGTCCAAGCATCAAAACTTAATGTCAAGTCTTCCAAGGGCCTTCATGTTGTTACCACTAAGACAGGACGCCAAAAGCTTCTCCTCAACATTCCCTCAGTACCTATTGATGGGATTTCTTTCCATCATGAAAAAAATGCTCAAAGGTGGAAGTATGTTGTGCAGCAAAGGATAGCATATGAGGGAAATGTTTCTGACAAATATCAATCATGTGTCAGTGTTATGGATCATATCAGCCAAGCTGGTTTGTCAAGAACTATTCTAAATGTGTGA

mRNA sequence

ATGTCAAAAGAAAAAGGTCATGCTCCTATGAATACACGATCATCTAGTTTTGAAAGTAGCTCTATTGGGTCCCTACAACATCACAATTCTGATGACTCTGTATTTAATCCATCTGACCATTTGCTCCCCGAATCTGAGGACATTCCTGAGACTGTTGCTTCTGGTGATCATAATGTGTCTATTCGGGCTCCTCCCTCATCTTCTATAAATGACCCAAACCTATCTCAACCTAACCCTGAAGATCTCGTCCAAGCATCAAAACTTAATGTCAAGTCTTCCAAGGGCCTTCATGTTGTTACCACTAAGACAGGACGCCAAAAGCTTCTCCTCAACATTCCCTCAGTACCTATTGATGGGATTTCTTTCCATCATGAAAAAAATGCTCAAAGGTGGAAGTATGTTGTGCAGCAAAGGATAGCATATGAGGGAAATGTTTCTGACAAATATCAATCATGTGTCAGTGTTATGGATCATATCAGCCAAGCTGGTTTGTCAAGAACTATTCTAAATGTGTGA

Coding sequence (CDS)

ATGTCAAAAGAAAAAGGTCATGCTCCTATGAATACACGATCATCTAGTTTTGAAAGTAGCTCTATTGGGTCCCTACAACATCACAATTCTGATGACTCTGTATTTAATCCATCTGACCATTTGCTCCCCGAATCTGAGGACATTCCTGAGACTGTTGCTTCTGGTGATCATAATGTGTCTATTCGGGCTCCTCCCTCATCTTCTATAAATGACCCAAACCTATCTCAACCTAACCCTGAAGATCTCGTCCAAGCATCAAAACTTAATGTCAAGTCTTCCAAGGGCCTTCATGTTGTTACCACTAAGACAGGACGCCAAAAGCTTCTCCTCAACATTCCCTCAGTACCTATTGATGGGATTTCTTTCCATCATGAAAAAAATGCTCAAAGGTGGAAGTATGTTGTGCAGCAAAGGATAGCATATGAGGGAAATGTTTCTGACAAATATCAATCATGTGTCAGTGTTATGGATCATATCAGCCAAGCTGGTTTGTCAAGAACTATTCTAAATGTGTGA
BLAST of CSPI01G14870 vs. TrEMBL
Match: A0A0A0LIG9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G231965 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 5.6e-16
Identity = 56/142 (39.44%), Postives = 81/142 (57.04%), Query Frame = 1

Query: 30  SDDSVFNPSDHLLPESEDIPETVASGDHNVSIRAPPSSSINDPNLSQPNPEDLVQASKLN 89
           S  S  + S  LL  + ++PE     D       P    ++  +   P  +D + A    
Sbjct: 5   SSSSESSSSKSLLQTNVEVPEL----DSKEPTETPTHPHVHTFDSPCPENKDRLHAPMKT 64

Query: 90  VKSSKGLHVVTTKTGRQKLLLNIPSVPIDGISFHHEKNAQRWKYVVQQRIAYEGNVSDKY 149
            + SK L V+ TK G++KL   IP V IDGISFHHE++AQRWKYV+Q+RI  E N+S+K+
Sbjct: 65  KQFSKCLKVIPTKIGKRKLSPKIPFVSIDGISFHHEESAQRWKYVIQRRIDDEVNISNKH 124

Query: 150 QSCVSVMDHISQAGLSRTILNV 172
            S +SV + I + GL +TI N+
Sbjct: 125 HSYISVTELIIKVGLCKTIANI 142

BLAST of CSPI01G14870 vs. TrEMBL
Match: A0A0A0L3U9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G507410 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.8e-09
Identity = 45/103 (43.69%), Postives = 59/103 (57.28%), Query Frame = 1

Query: 65  PSSSINDP--NLSQPNPEDLVQASKLNVK-SSKGLHVVTTKTGRQKLLLNIPSVPIDGIS 124
           PS   N+P  +  +P P     +SK      S G  VVT K+ R+KLL NI   P+DGIS
Sbjct: 59  PSPITNNPTHHTVEPAPTSKFGSSKFQTCFPSHGQKVVTIKSDRRKLLPNIHVDPLDGIS 118

Query: 125 FHHEKNAQRWKYVVQQRIAYEGNVSDKYQSCVSVMDHISQAGL 165
           FH E    +WKYVVQ+ IA E  +S ++  CV+VM+ I   GL
Sbjct: 119 FHSEDGVLKWKYVVQRCIADECEISYQHHFCVAVMNLIRSVGL 161

BLAST of CSPI01G14870 vs. TrEMBL
Match: Q84VH7_SOYBN (Envelope-like protein (Fragment) OS=Glycine max PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.7e-07
Identity = 32/82 (39.02%), Postives = 47/82 (57.32%), Query Frame = 1

Query: 87  KLNVKSSKGLHVVTTKTGRQKLLLNIPSVPIDGISFHHEKNAQRWKYVVQQRIAYEGNVS 146
           +L+V +SK       KT  +K+  N+P  P+D ISFH   N ++WKYV Q+R+A E  + 
Sbjct: 304 ELDVSTSK-----KAKTSGKKVPGNVPDAPLDNISFHSIGNVEKWKYVYQRRLAVERELG 363

Query: 147 DKYQSCVSVMDHISQAGLSRTI 169
                C  +MD I  AGL +T+
Sbjct: 364 RDALDCKEIMDLIKAAGLLKTV 380

BLAST of CSPI01G14870 vs. TrEMBL
Match: Q84VI3_SOYBN (Envelope-like protein (Fragment) OS=Glycine max PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.7e-07
Identity = 32/82 (39.02%), Postives = 47/82 (57.32%), Query Frame = 1

Query: 87  KLNVKSSKGLHVVTTKTGRQKLLLNIPSVPIDGISFHHEKNAQRWKYVVQQRIAYEGNVS 146
           +L+V +SK       KT  +K+  N+P  P+D ISFH   N ++WKYV Q+R+A E  + 
Sbjct: 304 ELDVSTSK-----KAKTSGKKVPGNVPDAPLDNISFHSIGNVEKWKYVYQRRLAVERELG 363

Query: 147 DKYQSCVSVMDHISQAGLSRTI 169
                C  +MD I  AGL +T+
Sbjct: 364 RDALDCKEIMDLIKAAGLLKTV 380

BLAST of CSPI01G14870 vs. TrEMBL
Match: Q84VH5_SOYBN (Envelope-like protein (Fragment) OS=Glycine max PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 6.3e-07
Identity = 28/67 (41.79%), Postives = 40/67 (59.70%), Query Frame = 1

Query: 102 KTGRQKLLLNIPSVPIDGISFHHEKNAQRWKYVVQQRIAYEGNVSDKYQSCVSVMDHISQ 161
           KT  +K+  N+P  P+D ISFH   N +RWK+V Q+R+A E  +      C  +MD I  
Sbjct: 322 KTSGKKVPGNVPDAPLDNISFHSIDNVERWKFVYQRRLALERELGRDALDCKEIMDLIKA 381

Query: 162 AGLSRTI 169
           AGL +T+
Sbjct: 382 AGLLKTV 388

BLAST of CSPI01G14870 vs. NCBI nr
Match: gi|778730782|ref|XP_011659856.1| (PREDICTED: cell wall protein RBR3-like [Cucumis sativus])

HSP 1 Score: 115.9 bits (289), Expect = 6.8e-23
Identity = 82/181 (45.30%), Postives = 107/181 (59.12%), Query Frame = 1

Query: 1   MSKEKGHAPMNTRSSSFESS---------SIGSLQHHNSDDSVFNPSDHLLPESEDIPET 60
           +SKEKG APM+  S+   SS         S GS   H   D+   P+   +P S    + 
Sbjct: 88  VSKEKGKAPMSDSSTDASSSTSVPMSNRQSFGSSSSHKLSDA---PTQ--VPPSPAPAQP 147

Query: 61  VASGDHNVSIRAPPSSSINDPN-LSQPNPEDLVQASKLNVKSSKGLHVVTTKTGRQKLLL 120
            +S     +  APPSS+  + +  S P P+         V   +G   VT KTGR+ L  
Sbjct: 148 YSSSQPAAAQPAPPSSATKEADKTSSPPPQT-------KVPEPRG---VTIKTGRRCLPR 207

Query: 121 NIPSVPIDGISFHHEKNAQRWKYVVQQRIAYEGNVSDKYQSCVSVMDHISQAGLSRTILN 172
           NIPSVPIDGISFHHE+NAQ W++VVQ R+A E N+S K+QSCV++M+ I+QAGLSRTILN
Sbjct: 208 NIPSVPIDGISFHHEENAQCWRFVVQTRLADEVNISYKHQSCVAIMELINQAGLSRTILN 253

BLAST of CSPI01G14870 vs. NCBI nr
Match: gi|659129246|ref|XP_008464590.1| (PREDICTED: uncharacterized protein LOC103502436 [Cucumis melo])

HSP 1 Score: 112.1 bits (279), Expect = 9.9e-22
Identity = 65/149 (43.62%), Postives = 90/149 (60.40%), Query Frame = 1

Query: 23  GSLQHHNSDDSVFNPSDHLLPESEDIPETVASGDHNVSIRAPPSSSINDPNLSQPNPEDL 82
           GSL+    +  +   S+    ++ D  E V   DHN  +   P +   DP+  Q  P   
Sbjct: 39  GSLKLDIPEGGIEARSEETPLDNVDGVELVVPSDHNDEV---PVADTIDPSAQQQTPSVP 98

Query: 83  VQASKLNVKSSKGLHVVTTKTGRQKLLLNIPSVPIDGISFHHEKNAQRWKYVVQQRIAYE 142
            +      K  +    +TTK GR+K+ LNIPSVPI GISFHHE+N QRWK+VVQ+RIA E
Sbjct: 99  TERKSSRKKGQQLRRNITTKAGRKKIPLNIPSVPIYGISFHHEENVQRWKFVVQRRIADE 158

Query: 143 GNVSDKYQSCVSVMDHISQAGLSRTILNV 172
            N+S+K+ SCVS+++ I +AGLS+TI NV
Sbjct: 159 VNISNKHHSCVSIINLIEKAGLSKTISNV 184

BLAST of CSPI01G14870 vs. NCBI nr
Match: gi|659074587|ref|XP_008437685.1| (PREDICTED: uncharacterized protein LOC103483026 [Cucumis melo])

HSP 1 Score: 108.6 bits (270), Expect = 1.1e-20
Identity = 72/165 (43.64%), Postives = 97/165 (58.79%), Query Frame = 1

Query: 8   APMNTRSSSFESSSIGSLQHHNSDDSVFNPSDHLLPESEDIPETVASGDHNVSIRAPPSS 67
           AP N+  +S   SS+  L+      S   P D++     D  E VA GDHN  +   P +
Sbjct: 97  APSNSHVASPAISSV--LEGGTEARSEETPLDNV-----DDVEPVAPGDHNDEV---PVA 156

Query: 68  SINDPNLSQPNPEDLVQASKLNVKSSKGLHVVTTKTGRQKLLLNIPSVPI-DGISFHHEK 127
              DP+  Q       +      K  +    +TTK GR+K+ LNIPSVPI DGISFH E+
Sbjct: 157 DTVDPSAQQETLSVPTEPKPSRKKGQQLRRNITTKAGRKKIPLNIPSVPIVDGISFHLEE 216

Query: 128 NAQRWKYVVQQRIAYEGNVSDKYQSCVSVMDHISQAGLSRTILNV 172
           N QRWK++VQ+RIA + N+SDKY SCVS+M+ I + GLS+TIL+V
Sbjct: 217 NVQRWKFIVQRRIANDVNISDKYHSCVSIMNLIEKVGLSKTILDV 251

BLAST of CSPI01G14870 vs. NCBI nr
Match: gi|659109401|ref|XP_008454699.1| (PREDICTED: uncharacterized protein LOC103495053 [Cucumis melo])

HSP 1 Score: 107.5 bits (267), Expect = 2.4e-20
Identity = 60/128 (46.88%), Postives = 81/128 (63.28%), Query Frame = 1

Query: 44  ESEDIPETVASGDHNVSIRAPPSSSINDPNLSQPNPEDLVQASKLNVKSSKGLHVVTTKT 103
           +++D  E VA GD+N  +   P +   DP   Q       +      K  +    +TTK 
Sbjct: 53  DNDDGVEPVAPGDYNDEV---PVADTVDPGAQQEPSSVPTELKPARKKGQQIRRNITTKA 112

Query: 104 GRQKLLLNIPSVPIDGISFHHEKNAQRWKYVVQQRIAYEGNVSDKYQSCVSVMDHISQAG 163
           GR+K+ LNIPSVPIDGISFH E+N  RWK+VVQ+RIA E N+SDK+ SCVS+M+ I +A 
Sbjct: 113 GRKKIPLNIPSVPIDGISFHLEENIHRWKFVVQRRIADEVNISDKHHSCVSIMNLIEKAR 172

Query: 164 LSRTILNV 172
           LS+TI +V
Sbjct: 173 LSKTISDV 177

BLAST of CSPI01G14870 vs. NCBI nr
Match: gi|659114868|ref|XP_008457264.1| (PREDICTED: uncharacterized protein LOC103496990 [Cucumis melo])

HSP 1 Score: 105.9 bits (263), Expect = 7.1e-20
Identity = 54/108 (50.00%), Postives = 74/108 (68.52%), Query Frame = 1

Query: 64  PPSSSINDPNLSQPNPEDLVQASKLNVKSSKGLHVVTTKTGRQKLLLNIPSVPIDGISFH 123
           PPS+       S+  PE          K+ +   +VTTKT R+K+ +N+PSVPIDGISFH
Sbjct: 142 PPSTDDPIAPSSEGRPEYPKGPKPPKRKTQQARKIVTTKTDRKKISVNVPSVPIDGISFH 201

Query: 124 HEKNAQRWKYVVQQRIAYEGNVSDKYQSCVSVMDHISQAGLSRTILNV 172
           HE++ Q WK+V+Q+RI  E N+SDK+QSC+S+MD I +AGL +TI NV
Sbjct: 202 HEESVQCWKFVMQRRIVDEVNISDKHQSCMSIMDLIHKAGLEKTISNV 249

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LIG9_CUCSA5.6e-1639.44Uncharacterized protein OS=Cucumis sativus GN=Csa_2G231965 PE=4 SV=1[more]
A0A0A0L3U9_CUCSA1.8e-0943.69Uncharacterized protein OS=Cucumis sativus GN=Csa_4G507410 PE=4 SV=1[more]
Q84VH7_SOYBN3.7e-0739.02Envelope-like protein (Fragment) OS=Glycine max PE=4 SV=1[more]
Q84VI3_SOYBN3.7e-0739.02Envelope-like protein (Fragment) OS=Glycine max PE=4 SV=1[more]
Q84VH5_SOYBN6.3e-0741.79Envelope-like protein (Fragment) OS=Glycine max PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|778730782|ref|XP_011659856.1|6.8e-2345.30PREDICTED: cell wall protein RBR3-like [Cucumis sativus][more]
gi|659129246|ref|XP_008464590.1|9.9e-2243.62PREDICTED: uncharacterized protein LOC103502436 [Cucumis melo][more]
gi|659074587|ref|XP_008437685.1|1.1e-2043.64PREDICTED: uncharacterized protein LOC103483026 [Cucumis melo][more]
gi|659109401|ref|XP_008454699.1|2.4e-2046.88PREDICTED: uncharacterized protein LOC103495053 [Cucumis melo][more]
gi|659114868|ref|XP_008457264.1|7.1e-2050.00PREDICTED: uncharacterized protein LOC103496990 [Cucumis melo][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G14870.1CSPI01G14870.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI01G14870CsaV3_1G014990Cucumber (Chinese Long) v3cpicucB001
CSPI01G14870CsaV3_1G015900Cucumber (Chinese Long) v3cpicucB006
The following gene(s) are paralogous to this gene:

None