CSPI01G14870 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAAAAGAAAAAGGTCATGCTCCTATGAATACACGATCATCTAGTTTTGAAAGTAGCTCTATTGGGTCCCTACAACATCACAATTCTGATGACTCTGTATTTAATCCATCTGACCATTTGCTCCCCGAATCTGAGGACATTCCTGAGACTGTTGCTTCTGGTGATCATAATGTGTCTATTCGGGCTCCTCCCTCATCTTCTATAAATGACCCAAACCTATCTCAACCTAACCCTGAAGATCTCGTCCAAGCATCAAAACTTAATGTCAAGTCTTCCAAGGGCCTTCATGTTGTTACCACTAAGACAGGACGCCAAAAGCTTCTCCTCAACATTCCCTCAGTACCTATTGATGGGATTTCTTTCCATCATGAAAAAAATGCTCAAAGGTGGAAGTATGTTGTGCAGCAAAGGATAGCATATGAGGGAAATGTTTCTGACAAATATCAATCATGTGTCAGTGTTATGGATCATATCAGCCAAGCTGGTTTGTCAAGAACTATTCTAAATGTGTGA ATGTCAAAAGAAAAAGGTCATGCTCCTATGAATACACGATCATCTAGTTTTGAAAGTAGCTCTATTGGGTCCCTACAACATCACAATTCTGATGACTCTGTATTTAATCCATCTGACCATTTGCTCCCCGAATCTGAGGACATTCCTGAGACTGTTGCTTCTGGTGATCATAATGTGTCTATTCGGGCTCCTCCCTCATCTTCTATAAATGACCCAAACCTATCTCAACCTAACCCTGAAGATCTCGTCCAAGCATCAAAACTTAATGTCAAGTCTTCCAAGGGCCTTCATGTTGTTACCACTAAGACAGGACGCCAAAAGCTTCTCCTCAACATTCCCTCAGTACCTATTGATGGGATTTCTTTCCATCATGAAAAAAATGCTCAAAGGTGGAAGTATGTTGTGCAGCAAAGGATAGCATATGAGGGAAATGTTTCTGACAAATATCAATCATGTGTCAGTGTTATGGATCATATCAGCCAAGCTGGTTTGTCAAGAACTATTCTAAATGTGTGA ATGTCAAAAGAAAAAGGTCATGCTCCTATGAATACACGATCATCTAGTTTTGAAAGTAGCTCTATTGGGTCCCTACAACATCACAATTCTGATGACTCTGTATTTAATCCATCTGACCATTTGCTCCCCGAATCTGAGGACATTCCTGAGACTGTTGCTTCTGGTGATCATAATGTGTCTATTCGGGCTCCTCCCTCATCTTCTATAAATGACCCAAACCTATCTCAACCTAACCCTGAAGATCTCGTCCAAGCATCAAAACTTAATGTCAAGTCTTCCAAGGGCCTTCATGTTGTTACCACTAAGACAGGACGCCAAAAGCTTCTCCTCAACATTCCCTCAGTACCTATTGATGGGATTTCTTTCCATCATGAAAAAAATGCTCAAAGGTGGAAGTATGTTGTGCAGCAAAGGATAGCATATGAGGGAAATGTTTCTGACAAATATCAATCATGTGTCAGTGTTATGGATCATATCAGCCAAGCTGGTTTGTCAAGAACTATTCTAAATGTGTGA
BLAST of CSPI01G14870 vs. TrEMBL
Match: A0A0A0LIG9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G231965 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 5.6e-16 Identity = 56/142 (39.44%), Postives = 81/142 (57.04%), Query Frame = 1
BLAST of CSPI01G14870 vs. TrEMBL
Match: A0A0A0L3U9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G507410 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.8e-09 Identity = 45/103 (43.69%), Postives = 59/103 (57.28%), Query Frame = 1
BLAST of CSPI01G14870 vs. TrEMBL
Match: Q84VH7_SOYBN (Envelope-like protein (Fragment) OS=Glycine max PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 3.7e-07 Identity = 32/82 (39.02%), Postives = 47/82 (57.32%), Query Frame = 1
BLAST of CSPI01G14870 vs. TrEMBL
Match: Q84VI3_SOYBN (Envelope-like protein (Fragment) OS=Glycine max PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 3.7e-07 Identity = 32/82 (39.02%), Postives = 47/82 (57.32%), Query Frame = 1
BLAST of CSPI01G14870 vs. TrEMBL
Match: Q84VH5_SOYBN (Envelope-like protein (Fragment) OS=Glycine max PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 6.3e-07 Identity = 28/67 (41.79%), Postives = 40/67 (59.70%), Query Frame = 1
BLAST of CSPI01G14870 vs. NCBI nr
Match: gi|778730782|ref|XP_011659856.1| (PREDICTED: cell wall protein RBR3-like [Cucumis sativus]) HSP 1 Score: 115.9 bits (289), Expect = 6.8e-23 Identity = 82/181 (45.30%), Postives = 107/181 (59.12%), Query Frame = 1
BLAST of CSPI01G14870 vs. NCBI nr
Match: gi|659129246|ref|XP_008464590.1| (PREDICTED: uncharacterized protein LOC103502436 [Cucumis melo]) HSP 1 Score: 112.1 bits (279), Expect = 9.9e-22 Identity = 65/149 (43.62%), Postives = 90/149 (60.40%), Query Frame = 1
BLAST of CSPI01G14870 vs. NCBI nr
Match: gi|659074587|ref|XP_008437685.1| (PREDICTED: uncharacterized protein LOC103483026 [Cucumis melo]) HSP 1 Score: 108.6 bits (270), Expect = 1.1e-20 Identity = 72/165 (43.64%), Postives = 97/165 (58.79%), Query Frame = 1
BLAST of CSPI01G14870 vs. NCBI nr
Match: gi|659109401|ref|XP_008454699.1| (PREDICTED: uncharacterized protein LOC103495053 [Cucumis melo]) HSP 1 Score: 107.5 bits (267), Expect = 2.4e-20 Identity = 60/128 (46.88%), Postives = 81/128 (63.28%), Query Frame = 1
BLAST of CSPI01G14870 vs. NCBI nr
Match: gi|659114868|ref|XP_008457264.1| (PREDICTED: uncharacterized protein LOC103496990 [Cucumis melo]) HSP 1 Score: 105.9 bits (263), Expect = 7.1e-20 Identity = 54/108 (50.00%), Postives = 74/108 (68.52%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |