CsaV3_1G014930 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTAATTTGTTATTTTTAACCTAAACTTTTATGCTTCATTTATAGGGCTGCATATGCTGCTTTATCTTCATCTTCATCTCGGATGTCCTTGAAAGTTTGATAAAATCTATACGTTCTTTATGGCTTCTCTTAAGCTTTTCATTTCCCCCTTTTTCATGTTTATAGTTCTAATTGCATCAACTCAACGTGCACAATGCAACACTTTGAAGGCAAAGATTTCTTGCCTTGATTGTCAATCCAACTATGACTTCTCAGGTTAATACCATAATCCTCTGATTTTGTTGTTTATGCATTTGTTCTTCTCTCTCTCTCCACGATGGTTTTTACTTGTAATCATATATGAAATTTAGGTCAATATTCGTTTTCTTTATCTTGAAAAAGAGATGTTTTCACTGCAACAAATTGAACTTTCGCTGACTCCTGAATGATAGCAAATGGAGTTTTTAAGAAAAGTCAAACTTTTTGGGTAAGATTTTCACTGTCATGGTAGAGTTTTTAAAGTTTTACGAGAGTTCTTTTGTGGTCAGATTTTTGCTGTCAAGGTATGTTTATTTGACAGAAATAGTCAGCTTTCAAACTATTTATTGACAATAATAAATTTTCATCTAAAATGTTACCATTACGACCATCACCTAAGGGTCTAAAGAAAAAAATATATTTTTCAAACTCATTTTTGTTTAAAATCTTTTTCTTAAAAATTATTTATAAGGTATTATTTAAAATATACCTTAAAAATTATTTTTGAGTTTTTTTTTTTCAAAATAATTTATTTTCTAAATTAAACATAATCCAAATGATTATTGTTGATTAAATTCAAAATTCATAAAACAACCAATTCTAACATTTTCTTTCACGAATTATCTATATACACTTATTTGTTACAAGACTAAAACAAGAGTCACCAAAAGTAGTAATATCCTTTTTACACTGTCATATCTAAACCTATTTTTTTGTAGTATTGTTTTATTTAAAAATGTTTATGAATGATTTTGGGTGTTTCTTAAATTTAATTTTTATTTTTTAAAAAAGAAAGAACTAGTGGTGTTTGATTTAGAATTTAAAAGTGGTTAAAAGTGTGTGTCACAATTAATGGTGCATTCTATCTTTTAATGACAACACAAGTGGTTTTGAACATTTTAATATGAAAATAAGGAATACAGTTTTCTTAGAAGAAACATTTTTAATTAATTTCCTTTGGATGTGCTTATATAGCAAGTGCTTCACTTAATATAAACATTTCAGCTACTCTCTAAAGTCAAAATTATTGTAGTCAGATTTAACAATGTTTGTTAAAAATGTTAATTAAATGTCCTCAAAGGTGTTTCCTTTGTTCTCAAAAAGGAAATAGTTGTGTTCATCGTACAATTTTAAAACTGTTGTTCGTGACAATTGTGAGGGTGTATTTTATTTGCACGAGAAATATCAACTTACATCCCAAACCTAAAACTATAGACGCTTAACTAATAGTTATATCAATTTAAATCATGAATTTTAAAATTTGTATTCATTTAGACCTCAAACAAATAATTGTATCAATTAATCTCGAACTTTTATAAGTATATCATTTTAAATTCCGAACTTACGTGATAGTATCAAATTAAATCATCCATTATATTATGTTTTATTTGGATACACTTGTAAAGTTAATTTATGTAAGTTCAAGGTTTAATTTAATATAATTGTGAAAGTTCAAAATTTTAAATTGATACAACTGCAAAGATGCTCGATGTTTAAATTGATATCATTATTAGTTGATAGTCTAAACTGAATACAATCCTACAGTTTAGGGTGTTAATTGATATTTGTCATTATCTTTTATTGTTCGGTGACAAAAAGTGTGTCATGGTGTGAAGTTCTAAAAACATATGGATGAGAGATATCGTTTTCTTTTATAGAAACACTATTTAATTGATTTTCTTTGTGACACGTTTTTGGTTAAACAAGTGCTTCACCTAGGGCTCGTCTAATAACGATATTATTTTTCATTTCTCGTTTTTCGTTCTTTGTTCCTTGTTTCTTATTTTTTTTGGTGAATTAGTAACAGAAATATGTCTGGTAACCATTCATGTGTTTTTGTTGTTCAAAAAAGAAAAAGAAAAAAAAATACAAATGTATTTGAATTGTTTGTTTCTCGTTTCATACATTCATGTGTTCTAACATTTTCTCTAATTTGATAGTTTTATAATTTATGCATACACTGTATGTAATGTAAATGAATTCAAATATAAAAATAGTTATAAAACATTTACATTATTGAGTACATATAAGTCTGGATACAAATGTTAATAAGTATATAATATAATCGTTTTCATTATTCATATGTTGCTAATCTTCTACAAGTCATTTATCTCACATGTTGACTAAAATCCAACTCAATATTATTAGGTAAATGTTGTGTTGTAAAATATCAAAAGTGAACCTAAATTAATATTTTAGTAAACAAAAGTAGGAAATTTAAAAGCGGATAGTCCTCTAATAGTCCTTTGATATATAACCGTTTGATATATCTAATTACTTAGCTTGTTACATTTGTCATATTTGCAATATGCAAAAAAAAAAAAAATTATGTTATAAACTATTTTTTAATTTTTTTTCATCTAATACAATTTTTCAATCTAAATATTGAAAATTTAAAATTTAAAATTATGGTATAGATATCCAAGAATAAAAAAACATTAAAGTAAAATATAAATATATAAAAAAAAGTAAATAACAAGCTAGAGTAACATATAAATATAAATAAAAAATAGAAAGTTTAAAAATAAAATTTACTCAATTCATAAAAAAGAACTTATTTAAAATAAATATTTAGAAGTGTTTCAAATGGTTTGGGAAAGGCATATTTAAAAAGAAATGAGTACTTTTAGGAGAAAATTATAAGAGAAATAATTACTAGAAAGAAAAACAATACTAAACTACTCTACCTATGATTGCATTCATTTCCTCATAATTTAGGAAACTTGATCATGGTGAAGTGTGAGAGAGCAAAAAACTTAACAATAGCAATAACCAAAGCCGATGGATCATTCGAAACTTCGCTTCCATCCAACATGGCCTCCGAAGCAGCTCCTTCTTCTCCCAAGTGCATAGCCAAGCTCCTTGGAGGTTCTCACCAGCTCTTTGCTTCAAGGAAAGAGATGGTTTCTACTATCATCAAAGAAACCAACTCCAAGTTCTTCACAATTGCCACTGCTCTCAAGTTCTCAACATGCAAAGAAATCAGTAGAAACTGCAAAGCCATAAAGAAGGAGTCTGTTGAAGATTCAAAAACCTTTGATTTCCCTTTGCCGCCTGAGTGGGGCTTCCCACCCACAAGCTACTACATCCCTGTGCTTCCTATCATAGGCATTCCTTGAGGATTAATTATATATTGTATGTTTGAGGAGCATATATATATGGCTAAGTATTACAATAAATGTGGTGTGTCAGAGATTAGTTTGTATCACCTGAAAACTCATGGATAAGTGTAAGTGCTTATAGTTAATAATGGTTGTCTACTCATTCTCTATTATGTGGTTTAATGATGTTTTTGTAACTATTGCTATAATAATAGTAATCTATAATTGGTAAGAGTTCGTATGTTTTC ATGGCTTCTCTTAAGCTTTTCATTTCCCCCTTTTTCATGTTTATAGTTCTAATTGCATCAACTCAACGTGCACAATGCAACACTTTGAAGGCAAAGATTTCTTGCCTTGATTGTCAATCCAACTATGACTTCTCAGGAAACTTGATCATGGTGAAGTGTGAGAGAGCAAAAAACTTAACAATAGCAATAACCAAAGCCGATGGATCATTCGAAACTTCGCTTCCATCCAACATGGCCTCCGAAGCAGCTCCTTCTTCTCCCAAGTGCATAGCCAAGCTCCTTGGAGGTTCTCACCAGCTCTTTGCTTCAAGGAAAGAGATGGTTTCTACTATCATCAAAGAAACCAACTCCAAGTTCTTCACAATTGCCACTGCTCTCAAGTTCTCAACATGCAAAGAAATCAGTAGAAACTGCAAAGCCATAAAGAAGGAGTCTGTTGAAGATTCAAAAACCTTTGATTTCCCTTTGCCGCCTGAGTGGGGCTTCCCACCCACAAGCTACTACATCCCTGTGCTTCCTATCATAGGCATTCCTTGA ATGGCTTCTCTTAAGCTTTTCATTTCCCCCTTTTTCATGTTTATAGTTCTAATTGCATCAACTCAACGTGCACAATGCAACACTTTGAAGGCAAAGATTTCTTGCCTTGATTGTCAATCCAACTATGACTTCTCAGGAAACTTGATCATGGTGAAGTGTGAGAGAGCAAAAAACTTAACAATAGCAATAACCAAAGCCGATGGATCATTCGAAACTTCGCTTCCATCCAACATGGCCTCCGAAGCAGCTCCTTCTTCTCCCAAGTGCATAGCCAAGCTCCTTGGAGGTTCTCACCAGCTCTTTGCTTCAAGGAAAGAGATGGTTTCTACTATCATCAAAGAAACCAACTCCAAGTTCTTCACAATTGCCACTGCTCTCAAGTTCTCAACATGCAAAGAAATCAGTAGAAACTGCAAAGCCATAAAGAAGGAGTCTGTTGAAGATTCAAAAACCTTTGATTTCCCTTTGCCGCCTGAGTGGGGCTTCCCACCCACAAGCTACTACATCCCTGTGCTTCCTATCATAGGCATTCCTTGA MASLKLFISPFFMFIVLIASTQRAQCNTLKAKISCLDCQSNYDFSGNLIMVKCERAKNLTIAITKADGSFETSLPSNMASEAAPSSPKCIAKLLGGSHQLFASRKEMVSTIIKETNSKFFTIATALKFSTCKEISRNCKAIKKESVEDSKTFDFPLPPEWGFPPTSYYIPVLPIIGIP
BLAST of CsaV3_1G014930 vs. NCBI nr
Match: XP_004139493.1 (PREDICTED: uncharacterized protein LOC101207654 [Cucumis sativus] >KGN64941.1 hypothetical protein Csa_1G165730 [Cucumis sativus]) HSP 1 Score: 349.4 bits (895), Expect = 7.4e-93 Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0
BLAST of CsaV3_1G014930 vs. NCBI nr
Match: XP_008461260.1 (PREDICTED: uncharacterized protein LOC103499896 [Cucumis melo]) HSP 1 Score: 304.3 bits (778), Expect = 2.7e-79 Identity = 159/182 (87.36%), Postives = 168/182 (92.31%), Query Frame = 0
BLAST of CsaV3_1G014930 vs. NCBI nr
Match: XP_022945542.1 (uncharacterized protein LOC111449745 [Cucurbita moschata]) HSP 1 Score: 233.4 bits (594), Expect = 5.9e-58 Identity = 124/179 (69.27%), Postives = 143/179 (79.89%), Query Frame = 0
BLAST of CsaV3_1G014930 vs. NCBI nr
Match: XP_023542373.1 (uncharacterized protein LOC111802294 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 233.0 bits (593), Expect = 7.8e-58 Identity = 127/181 (70.17%), Postives = 145/181 (80.11%), Query Frame = 0
BLAST of CsaV3_1G014930 vs. NCBI nr
Match: XP_022142556.1 (uncharacterized protein LOC111012639 [Momordica charantia]) HSP 1 Score: 230.7 bits (587), Expect = 3.9e-57 Identity = 115/178 (64.61%), Postives = 147/178 (82.58%), Query Frame = 0
BLAST of CsaV3_1G014930 vs. TAIR10
Match: AT5G22430.1 (Pollen Ole e 1 allergen and extensin family protein) HSP 1 Score: 107.5 bits (267), Expect = 8.9e-24 Identity = 69/171 (40.35%), Postives = 100/171 (58.48%), Query Frame = 0
BLAST of CsaV3_1G014930 vs. TAIR10
Match: AT2G27385.1 (Pollen Ole e 1 allergen and extensin family protein) HSP 1 Score: 100.1 bits (248), Expect = 1.4e-21 Identity = 58/167 (34.73%), Postives = 81/167 (48.50%), Query Frame = 0
BLAST of CsaV3_1G014930 vs. TrEMBL
Match: tr|A0A0A0LYA1|A0A0A0LYA1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G165730 PE=4 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 4.9e-93 Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0
BLAST of CsaV3_1G014930 vs. TrEMBL
Match: tr|A0A1S3CDU1|A0A1S3CDU1_CUCME (uncharacterized protein LOC103499896 OS=Cucumis melo OX=3656 GN=LOC103499896 PE=4 SV=1) HSP 1 Score: 304.3 bits (778), Expect = 1.8e-79 Identity = 159/182 (87.36%), Postives = 168/182 (92.31%), Query Frame = 0
BLAST of CsaV3_1G014930 vs. TrEMBL
Match: tr|A5BY12|A5BY12_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0080g00760 PE=4 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 1.0e-34 Identity = 82/176 (46.59%), Postives = 115/176 (65.34%), Query Frame = 0
BLAST of CsaV3_1G014930 vs. TrEMBL
Match: tr|A0A2P5X2B5|A0A2P5X2B5_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA23216 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 5.7e-33 Identity = 80/174 (45.98%), Postives = 110/174 (63.22%), Query Frame = 0
BLAST of CsaV3_1G014930 vs. TrEMBL
Match: tr|A0A0B0PUP0|A0A0B0PUP0_GOSAR (Bile acid-inducible operon CD OS=Gossypium arboreum OX=29729 GN=F383_12975 PE=4 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 7.5e-33 Identity = 80/174 (45.98%), Postives = 110/174 (63.22%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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