CsaV3_1G014380 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G014380
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	transport and Golgi organization 2 homolog
Location	chr1 : 9844030 .. 9855645 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTATCGTACATCTCTCTCTTCTCTTTCCCTTCCTCTTCAGAAACTTCTGCAAATTCCAATTTACTTATCAAAACCTCATCCTCTAAATCGTATTTACCAATCAAATTCGAGCCCCTCTACCACCGATTCACCATCTCTAAGAAAGAAAAAACTTCGGATTGCTCATGTCGGTGGCGCCAAAGAGAAACCATAGGTTTTTTTTCTTGTTCTTTAGAAAAATCTCATTTACTTAATAATGGTGTTTATGACGTTTTTCTTCTAATTGAAAAATAAAATTGTGTCGTATCTGTTGTTAATCAAGAAGAAAAGTGGATGAAATGGAGACAAAGAAGATTTAAAGAATGCATAGTAGCTTCTCTAGTTTAATTCAATTGAAAAAAAACAAAAAAGTTCAATTCAATTGAAAAATGCATTTTTAATTTCTAGTTGCGTGTCAAAACTAGCTTACTCTGTCATATGCCACTTGAAAATACATAATTCCGCCCACTGATTATTCTGAAGTCAAAAGCAGTGACCTTCCCTGATTTTAAACAAGCTTCCTTCACCGCAGCTGATAACTCAACAATTGGTGTGCTCACAATCAACACCTCAATTTTTGGTACATAGAACAAAAATCATATCATTCTTTCAAACATAGAGTAGTACGTTGTTTTGTTCCTCCCATAAACCATAAGTGCAAAGTTTCCAACTTTTCCATCTTCTGATTCTTACTTTCTTAGCAGGAACTATGTGTATTGCAGCATTTGTTTGGCAGTCTCATTCACTATACTCTCTCATTCTCTTCCAGAACAGAGATGAATATCACAACAGGCAAATAAATTTATATTTCTCTGCACCCTTCCTCCTTCCCCCCTTAAATGCAATAGAGATTATGCATGACGACCATATGAGATTATACTTACAGGCCTACGAAACCAATGTCATGGTGGGAGGACAATGAGATAGCAGGAGGGAGAGACGAGGTTGGGGGCGGAACTTGGTTAGGTTGTTCAAGGAAAGGCAAGGTTGCATTTGTTACTAATGTGTTGGAACCTCATGAAATCCCTGACGCTAAAAGCCGTGGACACCTTCCTCTTCTCTTTCTGCAGGTTATATAGCATCATCATGTCTTTATATGATATATCATTGGAAGGGCTTTCAATGCATGATGAGGAATTAGAGATGTTTTAACTATTGAGCTAATTTTATTTTCACACTTCCATCCTTAATTTCTTAATTTTTATCATGCTTTCTTTTTCGTATTATTTTCTGCACATACTATCTACTAACTTTTCTAAGAAGGAATTTGCTCTTACGAACTTATCAATTTTCTCTACATACCTTTGCTTCCTAATCTCTCATCAACACACACCCACCTCTCATTATACGCATATAGTTCATCTCATTCTTCTATTTCAAACTTATCTCACTCAATGTTTTTCTTGTAATTTAAAATTTTCAAATACAAAAACAAAACAACTGCAAAATGTTGAAATACTTTTTGTTAAAAAAACACTTTTTATAGAACTTCTACAAAAGCGTTTGCAAACAGCTTGCTGTTGAAGCATGTTCAACTCTGGAATCTATGATCTTTCTAAAGATCTTCTAATTGAATCCATTTACAGTTATTATCCATTTTTAACAAGAGAATAGTGAAATAACAGAGCACAAAGAGTCCAAAGGAATTTGCAGAGGAGATAAAGGCAGAAGCGTATCAATATAATGGATTTAACCTAATAGTAGCTGACATAAGTACTAAAACCATGATTTATATCTCCAACAGAACAAAAGGGGATCATATTCTCATTCAGGAGGTACCTCCTGGTTTACATGTGTTATCTAATGCAGAACTTGATACCGCTTGGCATAAGGTTTGTAACTCCTAATCTTAACATTATTCAAGGCATGCATATGTGTGTGTGCGCGCGTGTGTGCATGTGCATATATACATATATACGCATATGCATATATATATATATAGACGCACATATGAAAAGGCAAACTAACCTGGAAGAAACAAAAAGTGAAGAAAAATCGAATAGTGAGAGACTGAAGGCTTTGACTTACATGCAGGTGCAGCGCTTGAGGCTAAAATTTAATGAACAGCTTTGTATATATGCTGAAGGTGAAATACCTGAGAAAGAGATGGTTGAGAGATTAATGAGGGATCATGTTAAAGCTGATGAAAGCAAACTTCCTCGTATATCCTCCCCTGACTGGGAGTACAATACAAGCTCTGTCTTTGTCCAATTTCAGACACCTCTGGTAAGCAGACAATTTGTTTTCATTCACAGCTGAAATTTTGACTTAGTTTTTAATCATTTTCAACACACAGGGATGTTTTGGTACCAGAAGCACATCTGTATTGACTATAACTAAAACAGGAATGGTACACTTTTATGAGACTTACCTAGAAACAGGTACTTGGAAGGAAAAAGCATTGAGTTACTTCATTGAATAGTGGAACTAACAATATATAATCATAAGAATTGTTGGTCAGTATATGTCAAAATTTTCGTTGAGTTTCTACAATGTCGACATTCTTTCACCTTCTACTTATCTGCTTACGGAGTTATTTATGTGGATGCTTTCCCTTTATTTAATTGCCCAGAACAAATAAAAGTGTGGCGGCCCATTTATTGGCCATATTTGATGTTTCTTGTCGTGTTTCCTCTTGCTGGGTTGCACCAGATTGGCTATCAGTATGTATTGGTTAAATAAGGGTTTTATGGCGTGATGCATTTGAGCTTGATGCCTCTTTTTTTCAAAAGGAAAAAAACAAACAAACAAACAAAAAAGAAGTCCATAAGACATGTGAATCATATGTATATATTCTAAAGCAAAAAAGCAAGTACGTTTTAAGATATACTATTGAAATCCGTAGATTAGATGCAATGATTCAAAGGTTAAATGGAAAGAGCAGGCAGTAAATTTTCTTTATTGAAACACACAAGCACCCAGACTGCCATACACAACCACATGCACATGGCGTTCTGCTGCCCATCGAGCAATCAATATGAACATGGTAGACGAGAGGAAACAAAGAATGTTCATTATCAATCTATTTAGTGCAGATGAAATGATATTCCAATACATAGAAAACAACTCACCTACTAAATGATACGCAAATCAATGGTGCAATTCGATAATAAAAAAACAAAAGTCTTTTACCACAGGTGATAAATCCAGTATTGTCTGCTTCCTTATAAATTTCCTTACTTTTGACTAATCTACCTGAAACTAAATAAAAGGTGATCATACTCCTATATACATCATAGGTAGGGGCAAAACCAGCTTCCTTAAGCTTTGCAAAGTATCTATCAAAGCTTTATCACTGCACTGTAAAGACTCAATTCTAACTTTTTTCTAAATCATAGATTTCAAATTTGCATTTTCACCATAAAAATAAAGAGAGATTGGATGCACTCTTTGTCACAGATATGATTCATGAATATTATTGAGACTATAAGAGGTTACAAATCTCATAACTGAAGTTGAAAAAAGAAATATACAAATGTCAATCACCTTCTAATCAACAAATCAGCAAACCCAACACAACTTGGCTACAAACCTAAAATGCTTTGTATGAAAATAAAAATGGGTACAACCCATCAACCAAAATCTTCCAACTAATTATACATTTTAAAGGGATATCTGTCACTTTCAATAGAAAGACAAAAGACATGAAAACAAAAAAATTAAAAACAAAAGACATACAAATCAAAAAATTTAAAACTAAAGCGTGTTTGAGGTGAGAGGTGAGTTATAAATGTCTAGATATTATAACAGTCTGTGATTATAGTATCTGCATTTAGAGTGTAGAAAATTATAGTTTGTAGGCAAACTATTATAGTCTATCTTTTTATAATATGTGTTTGAGGTTGAGATTATTATAATTTTGGTTTTTTACTACTCTATTTTGGCATACATATATACTATATATGAAATACATGTTTTTCTTCAATTGACTTTATCAAATCTAGTTAATTAGGATGTTCATTTAATAAATTTATCTTCAAATTGGGTTTTTCACTACATTAGCTGGCAATTGATGTCAGAATTCGACAGAGGAAGAGTCAACAAACATCCATACTAAAAAAATAACTCAAATAATAATATTTTCTTTTTTACATAAAAAAAATTAATGAGTGATGAAAAAATTGTTTTTACTATCAAATAATTTAATTTATGATATGTAATGTGAATATTGGGTTAATGGCAATTTATGACCGCTTGATGAGCATGAGGTCACGTTTGACTATCTTGTAAAGGTAAAATGTGTAAATGAGACTAAGAATGTTTAGATGACAAAAACATTTAAAAAAACAACTTATGACACTTTTTTTTTTTTGCATATTGCAAATATAACAAATAATTAGTGATATCTTAAGATTATTATATAAGTATCTGATAGCTATCAAAGAGTTATCAGAGTGCTATCAGATGATTATCGACTTTTAAATTTGTTATTTTTGCAATTTAAAAAATATAGTGACATGAGTCTTATTATCATAAATTTTTTTGTTATTTTTGCAAGTGTCCCTAATTAAATTTACATATTTATTTATACTTTTTACGCTTCTAAAACTTTATATATTTTACTTAGACTACAAGTTTGGGTCATTTAAATTTTAATAATTTTGATTCTAATATGAAAGAATATTATTAACCTTCTTTAAAACTTTGAAATATTATCAAATGCTAAATTTGTTCTAAACAAAATATCACTTAACTTTAAACTTGTTTGAAAGTAAATATTTAGCTTGTTTCACAGTTTGAGGTTGAAAAAATCCCTAAATATTTGAGAAAGTGAAACAAAGCAAGGTATTTCTAAACCATCAGGAACTATGTTGGCAATATAAAGAGGATTTAGATCGCCAATTGTGTGCTCCAATAACATGCCAACCTGAGGACAAACTCTTTAAAATAAATCAGTGTATGGGAAATTAGACAACAAGAGAGAAGAGCATTTATTGATACCATTTCAGCCTTGTGAAGACAGCCTTATCAGTTCTTCCCAGAGCTCATCATCATGTTGCATGCTAACAAACGACTCTACTGCCTGTCCATGATGACAACAAGATTTTATAACTAGTTCATAACCACAACTCAAAAGCGAAAAGAGAACTCAAATGCAAATTTGCGTGCTATCTGGAACCCAAACTGCCTTCAGTCAAAAGATAATGCAAGTACCTCTTCTATATCTCCTAATTTATCAACGATGACAGCAAGGGCAGTGTTTTGCATTTCCCATTCTTCCAAGAATAAAAACTTGCTCCCTCAAAAGACTTTTATTAATGCCAATATCATATGCATTGCGATTATGTTCACAAAGTCATAAACAGATGTAGACTAACCACTAGAAACAGCAATAGGTAATTTGAACATTCAAACCTTCTCAACTGTATAATGTTTGCTACGAAGAAAAGGAAGCTGCATCTTTGTATCATCATCAGCATAAAGCTCCACCTGCAATAGTTTTGGAGGGTAAAGGGGAAGCAAATTATTAAATAAGAACAAGAAGATTCTAACTAAAAGAAAACATTTATTATGGTTACGAACAAAATGAGCCAAAAGCTCTAAAACATAAGAGTATCTTAATATCATAGTCAGCATAAATCTCCACCTACAATGTTTACAGTTTTACTCGAGATCAAGCTTAATCATTCTATTACAAACCAAGGTAGTAAGGTATGACTTTATTCCACATTGGTTAGAATGGTATGTCCAATGTGGTACTTAAGGGCTCGTTTGGCAACAATTTTATTCCATGTTTCCGTTTCTTATTCCCTCTTAAGAACATGGATGTATTTGATAATCATTGTTTTTGTCCATGTATTTGGAAAAAAGAAACAGAAATAGAAACGTGTGTTTAATAACTGTTTCTTGTTTTCTTAATAATGTCTTACGTTAAAAATATGTCAACTCACATCTAATTCAATTAAACATCAAACAAATATATGTTCTAAGATTGGCTACGTTTTCTTGTCTAACCATGGTCCCTCAATTCTTAACCCATCAATTTCAACTTCATTGACACAACGTTGTTCGGAAGATTTTTGTGACATCTAGAATGTAATATTAAAATTGGAATAAAAAAGAAAATCATTAAAACTAGAAAGGAGAAAGAGGCATAGATAATTCACAATACAAACCAAACATTCAAGGTTGTTTTGTTTTACAAACTTCATGATTCTCTATATTTGTTCTTCTTGGATGACTACCGACAACTCATCTAAATTCTTAGCTTATCTGTCCCATTGCATCTACATATACATAAACTTACAGCTCAATATATACATATATGAAAACACTAGTCCCTTTAATGCACTAAGATATTGAGCTTTGGGACAACAGAATCAAGTTAAATATAAGGATCTTATGTACACAGGCAATGGGCTTCAACTCCTTTTTGGTAGCTTGTTTTGGTTCAACTTCTTCTCTTGTGCAATGATTTGTTTCAGTTGGCTGAGCTTCTTCAACCACAAGGACTTCCTCTACATTAGAGAACATGACTTCAGTGTAAGACATGTGCCTATGGTTTCTTCATATTCTCCAATCTACAAAAGAGATTTAAAACAAATATTTATATGAAAGTTTGAAAGAAATGCCAGTTATTCACAAAAATATAGACTACAACAGCCTTGAATCAAACCAAAAGATAAGAAGGTAAGATCAATATCATTTAAATTATGTATCAGCATAAATTTCAATACATCTGAAGCTTATCTATGAATCAAACCAAAAGATAAGAGATATTCTTAACAACAATAGTAAACACAATAATGCCAAGTGACTACACATTATGGTTCTGTTGAAGTACACTAGGTGAAAGCTTGTATCTTATTAACAACTTACCATCTTAAATTTGTCGCTGATAGTCAACACTGGATTCATGGTTTCCAAACAATTCTCCATTGCAAGGGATGCATTTCAATACACAAACAAGAATTAAACTCTTAAAAGTCATCAATTACATTCAAATTTGTTACTATATTTGATTTGAGGGTGTATAGAACATTTAACTCTCCAATGAAAACCGTATGTTGAAAATATACAGAAGAAACAAAGGGGAAAATGGAAAAAAATTCAACAAAAAGAATTAGAACAAGCTGTAAAGATAGAGAGTAAAACCAAAATTATCCCTCAAAGAACTTTACAAATGTAAATGCTATAGCTACCACCAGAATGGTTTTTTCAAGTGCTGTTAAATAGTAAGTTTGAAAGCATCAATGAAAAGACCACAAGTGAAACCCATTTTGAAGTTGTTCAGTAGAGCAATGGGGAAAGTTACCTTTGGTCGATTGTAATAAAATCGAGTAACATCGGTGAGGAGAATGCATACCACAGTAGCAAAAACATCATTTACTCCAAAAGCTCCAAATGACAATGAGATATTTTGTGCCACATAAAAGCCACCCAACAATGAGATTCATCCAAAAAGGGCCCTCCTCGAAGGACTTCTAAAGTAATTTCTTGAGAGCTCAGGCACGAGTCTAATGATATCAACTATCCTACTAGGACCTTCGGTATCTTGCACAACTTTGACACGAAAGCTACGTTGAGGGGAAGGTCGTGATTTAACCATATCATATCTCCAATATGAAGGATTCATTTTGTGAGTAAAGCCATAATTTAAGAGGCTAGTATGGACTAAACTAGCATATTGTGCCATTGAAGGTTTCACTTCCTAGACGGCTGTATAAAAAAATGTTGAGAACCTGAGATCATTAAAGAGTATTTTGCTTAAACTGATGAGTCACTAATACATAGAACACAAAGGCTAAAATTTGGCAATGTTGTTAAAATGACCCAAGAGTACCCATAAGGCTAATTATCATTAAATGAGGCATAAAATCAGTATAAATCGAGGAATGCCTGGAACCTGAAAGGGGTTTTGAAGGCAAAAACAGAGGATTGGAGTTCTAATTTGATAATGAACAATGATAACAATAAGCAGCAAATACATAGATTCAATTTCCAAAAACAATATCCACCTTTCCACTAAACTACAGCTGAAATTTACTATAGAAAACAAAAATCCTGCCAAACAAAGATAACAAAAAGGTTTAAATCTAAACAAAATTCATCTTAGGATTGAAAATTTGAGAAACCCATAACAGAAATGATAGGAAAATGGGAGAAAATTAAGGGAATACCTAGAATTCTGTTCCCAAGTTCCGCTTTGGGAGTGAGGAGAAAGAGAAGAGCTTCCTGTTGATGGAGCAAAGAAAATCATGAATTTGGAAATTGATGAAGAGGAAAGGGTAGCTGTACGTTTGATGAAGAGGAAGCTTGAGAAAACTATAGCCATAACTTTAGAAGAGAGGCAAAGAAGAAAGCCGGAGAAGAAACGAAGAACAAAGAGAGAAAAGGTAATCGGAGAGGAACTAAACAAAGAGAAACGGAAGAGGAACGAACGAAGAGAAAAAGAGAGTCGGAGAAGAAAGCCCAAGAACAAAGAGGAGAAACAAAGGGAAGAGAACAAGAATGGAACGAGGAGAAACTCTTTTTTGTTGTTCCCACAAATTTCTTATTAAATTAGAAACATTTCTAATTATTTTGGGAACAAGAAACAGGAACGTTACAAAACACATCCGTTTCTTAAAAAATTAGAACCAGAAACAAGAAATGGGAAACGGAAAACGGGAACGTTACCAAACGGGCCCTAAGTAGCTTGGCTCTCCTACCCCAACAGAAACCCCGTGGCTCTCCAAGGTGCTTAAGTACGTAACACATTCTTGCTAAAACCACCGGTAACTTTCAATTAGCAAACCAGCTTTCAGGCAGAAAAGTATAAATTGAAAAGGTACTCAGCAGTGTTATTGAGGTGCATTTTGAGGCAAGCTTATGGTCCTAGGCAAGGTGAGGCACGTAACCATCTTCTTGCCTTGTGCAAGGGTGTCATGTGGTGTACCTTCAATAGTCGACTCCCATTGCACTTTTTCTTTAGCTTTCAACATTGTGAACATGTAGTGGAGAGTGCCATTGCAAGGACACCACATAAAGCCAGAGCCAACAGTACATTATACCATCCCACTCAGAAAGCTGGAACTGGTCAAGTACTCCATACACAAAATGTCATTCAGTTTTTTCCTCGGCTTCTCTCAAATCAATCTCTCTCGTTTCTCCAATTCTTTTCCCAATTTCTATTTCTTATCTATATCCCCTTTAATTAGAGGAAATTCAATCCACTGATATACATCACTATTTATTTTCTTTTCATCCCCCCACCCTCCCTTTTTGTAATATCGATATTCCCTCCAAGAAAGAGATGCCAAGAGTTTCACTTATTTATTATTTTTAAATTTACATTTTATATTGGATCTCATAATGATAGAAGAATTTAACTGAATTCTTCAGGCAAGATTTCAGCCAAATTCTTCGTGAAAGAAAACTTCCATCATGTTAAAATCAACTAATCTTAGTTAAGAAGTTTGTTTATTGTTGATTATTTCCTTCATTGTTAATATTTTCATTGTATTTAAGATATATTTCTGTATTTATTTTTTCCTTATTTGTATTTTTCATTTTTTGTATTGGGTATTTCTATTTAAGAAAACCCCTTTCTTTCCGAGGGAAATAAGAGAAAACACATTTTTACACATGGTATCAGAGATTAAATTGTCCTAAAACTCTAAAAACACCTATTTCTCAAACACTAAAAACACCCTATTTGCCCCCCGCTGCCAGGGTCGTCAACTTTTCCTTGTTTACCATCGTGGTCAATCCTTCAAATCCAAGCTGAACCCGGAGCCAGAGCCGTCAAAGCTTTTTTTTTCTTTCCCTCGAGTGAAACTTGTCCAAAGGAGCCGCTTTTTGCTTAGGATAGCTCCTACCATAGGTCAGTCAAGTCTGCAACAATGTTAGACCTCCAATAATATTGCAATATAGCAGGAGAGGAAAGAAAGAGAAAGCATGTGTAATGGGGAGTGAGTGTGAGTGCTAATACTGGGCCCACAGTTAGTTAGGAGAGAATGGGAGGTTTAAATAGCGGGGAGAGTCACTGTGAGAGGGGAGGAAATATTTTCGAAGGACCTTTATCTTCATCCTTGAGAGAGAGGAGAGATAGAAGGAGAGCGATCAACTATTTTCTTGTATTCTTGCATTTATTTCACCGAATTGACAATCTATCGATTCATCCTTGTAATTTCTTTCGTTTTTACCGATTGAATAAGATCACTCCTAGTTGGTGTTATCACACCAATGTCGTGTTCCGTCACCTTCTGCCATGTTACACCTCCAATCACCGCCACCCCTGTTTTTTCTTCTTTAATCTGGTGTTTTCTTTCCAGATCTTTGGTTTTTCTCTTTGGGTTGGTGTTTCTTCAGCAATATGTCAGACACCAAGCCCATTGCCACTAAAGTCTTAGACAACCGCACCCTAAACAACAGTCCCACTGTCCAAATAACTACCATTCAACTTAATGGGATAACTTTCTTCGTTGGTCCCAAAATGTTCAAATCTATATTCATCAACAAGGGGAGATTGGTTACAAATACACACACATGGGCACATGTGAAAAGGCAAATGAACCCGCAAGAAAGAAAAAGTGAAGAAAAATAAAATAGAGTGACTGAAGGCTTTGACTTACATGCAGATGCAGCGCTTGAGGCTAAAATTTAATGAACAGCTTCGTATATATGCTGAAGGTGAAATACCATGAGAGATTAATGAGGGGCAATGTAAAAACTGATGAAAGCAAACTTCCTCATATATCCTCCCCTGACTGGGAGTACAATACAAGCTCTGTCTTTGTCCAATTTCAGACCCCTCTGATAAGCATACAATTTGATTTCATTCATAGCAGAAATTTTGACTTTAGTTTTTAAAAAAATTTCAACACAGGGATGTTTTGG

mRNA sequence

ATGTGTATTGCAGCATTTGTTTGGCAGTCTCATTCACTATACTCTCTCATTCTCTTCCAGAACAGAGATGAATATCACAACAGGCCTACGAAACCAATGTCATGGTGGGAGGACAATGAGATAGCAGGAGGGAGAGACGAGGTTGGGGGCGGAACTTGGTTAGGTTGTTCAAGGAAAGGCAAGGTTGCATTTGTTACTAATGTGTTGGAACCTCATGAAATCCCTGACGCTAAAAGCCGTGGACACCTTCCTCTTCTCTTTCTGCAGAGCACAAAGAGTCCAAAGGAATTTGCAGAGGAGATAAAGGCAGAAGCGTATCAATATAATGGATTTAACCTAATAGTAGCTGACATAAGTACTAAAACCATGATTTATATCTCCAACAGAACAAAAGGGGATCATATTCTCATTCAGGAGGTACCTCCTGGTTTACATGTGTTATCTAATGCAGAACTTGATACCGCTTGGCATAAGGTGCAGCGCTTGAGGCTAAAATTTAATGAACAGCTTTGTATATATGCTGAAGGTGAAATACCATGA

Coding sequence (CDS)

ATGTGTATTGCAGCATTTGTTTGGCAGTCTCATTCACTATACTCTCTCATTCTCTTCCAGAACAGAGATGAATATCACAACAGGCCTACGAAACCAATGTCATGGTGGGAGGACAATGAGATAGCAGGAGGGAGAGACGAGGTTGGGGGCGGAACTTGGTTAGGTTGTTCAAGGAAAGGCAAGGTTGCATTTGTTACTAATGTGTTGGAACCTCATGAAATCCCTGACGCTAAAAGCCGTGGACACCTTCCTCTTCTCTTTCTGCAGAGCACAAAGAGTCCAAAGGAATTTGCAGAGGAGATAAAGGCAGAAGCGTATCAATATAATGGATTTAACCTAATAGTAGCTGACATAAGTACTAAAACCATGATTTATATCTCCAACAGAACAAAAGGGGATCATATTCTCATTCAGGAGGTACCTCCTGGTTTACATGTGTTATCTAATGCAGAACTTGATACCGCTTGGCATAAGGTGCAGCGCTTGAGGCTAAAATTTAATGAACAGCTTTGTATATATGCTGAAGGTGAAATACCATGA

Protein sequence

MCIAAFVWQSHSLYSLILFQNRDEYHNRPTKPMSWWEDNEIAGGRDEVGGGTWLGCSRKGKVAFVTNVLEPHEIPDAKSRGHLPLLFLQSTKSPKEFAEEIKAEAYQYNGFNLIVADISTKTMIYISNRTKGDHILIQEVPPGLHVLSNAELDTAWHKVQRLRLKFNEQLCIYAEGEIP

Homology

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BLAST of CsaV3_1G014380 vs. NCBI nr
Match: XP_011654174.1 (PREDICTED: transport and Golgi organization 2 homolog isoform X1 [Cucumis sativus] >XP_011654178.1 PREDICTED: transport and Golgi organization 2 homolog isoform X1 [Cucumis sativus] >XP_011654181.1 PREDICTED: transport and Golgi organization 2 homolog isoform X1 [Cucumis sativus] >XP_011654185.1 PREDICTED: transport and Golgi organization 2 homolog isoform X1 [Cucumis sativus])

HSP 1 Score: 380.6 bits (976), Expect = 3.0e-102
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MCIAAFVWQSHSLYSLILFQNRDEYHNRPTKPMSWWEDNEIAGGRDEVGGGTWLGCSRKG 60
           MCIAAFVWQSHSLYSLILFQNRDEYHNRPTKPMSWWEDNEIAGGRDEVGGGTWLGCSRKG
Sbjct: 1   MCIAAFVWQSHSLYSLILFQNRDEYHNRPTKPMSWWEDNEIAGGRDEVGGGTWLGCSRKG 60

Query: 61  KVAFVTNVLEPHEIPDAKSRGHLPLLFLQSTKSPKEFAEEIKAEAYQYNGFNLIVADIST 120
           KVAFVTNVLEPHEIPDAKSRGHLPLLFLQSTKSPKEFAEEIKAEAYQYNGFNLIVADIST
Sbjct: 61  KVAFVTNVLEPHEIPDAKSRGHLPLLFLQSTKSPKEFAEEIKAEAYQYNGFNLIVADIST 120

Query: 121 KTMIYISNRTKGDHILIQEVPPGLHVLSNAELDTAWHKVQRLRLKFNEQLCIYAEGEIP 180
           KTMIYISNRTKGDHILIQEVPPGLHVLSNAELDTAWHKVQRLRLKFNEQLCIYAEGEIP
Sbjct: 121 KTMIYISNRTKGDHILIQEVPPGLHVLSNAELDTAWHKVQRLRLKFNEQLCIYAEGEIP 179

[Close]

BLAST of CsaV3_1G014380 vs. NCBI nr
Match: KGN64880.1 (hypothetical protein Csa_1G144330 [Cucumis sativus])

HSP 1 Score: 380.6 bits (976), Expect = 3.0e-102
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MCIAAFVWQSHSLYSLILFQNRDEYHNRPTKPMSWWEDNEIAGGRDEVGGGTWLGCSRKG 60
           MCIAAFVWQSHSLYSLILFQNRDEYHNRPTKPMSWWEDNEIAGGRDEVGGGTWLGCSRKG
Sbjct: 139 MCIAAFVWQSHSLYSLILFQNRDEYHNRPTKPMSWWEDNEIAGGRDEVGGGTWLGCSRKG 198

Query: 61  KVAFVTNVLEPHEIPDAKSRGHLPLLFLQSTKSPKEFAEEIKAEAYQYNGFNLIVADIST 120
           KVAFVTNVLEPHEIPDAKSRGHLPLLFLQSTKSPKEFAEEIKAEAYQYNGFNLIVADIST
Sbjct: 199 KVAFVTNVLEPHEIPDAKSRGHLPLLFLQSTKSPKEFAEEIKAEAYQYNGFNLIVADIST 258

Query: 121 KTMIYISNRTKGDHILIQEVPPGLHVLSNAELDTAWHKVQRLRLKFNEQLCIYAEGEIP 180
           KTMIYISNRTKGDHILIQEVPPGLHVLSNAELDTAWHKVQRLRLKFNEQLCIYAEGEIP
Sbjct: 259 KTMIYISNRTKGDHILIQEVPPGLHVLSNAELDTAWHKVQRLRLKFNEQLCIYAEGEIP 317

[Close]

BLAST of CsaV3_1G014380 vs. NCBI nr
Match: XP_011654190.1 (PREDICTED: transport and Golgi organization 2 homolog isoform X2 [Cucumis sativus])

HSP 1 Score: 380.6 bits (976), Expect = 3.0e-102
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MCIAAFVWQSHSLYSLILFQNRDEYHNRPTKPMSWWEDNEIAGGRDEVGGGTWLGCSRKG 60
           MCIAAFVWQSHSLYSLILFQNRDEYHNRPTKPMSWWEDNEIAGGRDEVGGGTWLGCSRKG
Sbjct: 1   MCIAAFVWQSHSLYSLILFQNRDEYHNRPTKPMSWWEDNEIAGGRDEVGGGTWLGCSRKG 60

Query: 61  KVAFVTNVLEPHEIPDAKSRGHLPLLFLQSTKSPKEFAEEIKAEAYQYNGFNLIVADIST 120
           KVAFVTNVLEPHEIPDAKSRGHLPLLFLQSTKSPKEFAEEIKAEAYQYNGFNLIVADIST
Sbjct: 61  KVAFVTNVLEPHEIPDAKSRGHLPLLFLQSTKSPKEFAEEIKAEAYQYNGFNLIVADIST 120

Query: 121 KTMIYISNRTKGDHILIQEVPPGLHVLSNAELDTAWHKVQRLRLKFNEQLCIYAEGEIP 180
           KTMIYISNRTKGDHILIQEVPPGLHVLSNAELDTAWHKVQRLRLKFNEQLCIYAEGEIP
Sbjct: 121 KTMIYISNRTKGDHILIQEVPPGLHVLSNAELDTAWHKVQRLRLKFNEQLCIYAEGEIP 179

[Close]

BLAST of CsaV3_1G014380 vs. NCBI nr
Match: XP_008462211.1 (PREDICTED: transport and Golgi organization 2 homolog [Cucumis melo] >XP_008462220.1 PREDICTED: transport and Golgi organization 2 homolog [Cucumis melo])

HSP 1 Score: 364.4 bits (934), Expect = 2.2e-97
Identity = 170/179 (94.97%), Postives = 177/179 (98.88%), Query Frame = 0


Query: 1   MCIAAFVWQSHSLYSLILFQNRDEYHNRPTKPMSWWEDNEIAGGRDEVGGGTWLGCSRKG 60
           MCIAAFVWQSHSLYSLILFQNRDEYHNRPTKPMSWWED+EIAGGRDEVGGGTWLGCSRKG
Sbjct: 1   MCIAAFVWQSHSLYSLILFQNRDEYHNRPTKPMSWWEDHEIAGGRDEVGGGTWLGCSRKG 60

Query: 61  KVAFVTNVLEPHEIPDAKSRGHLPLLFLQSTKSPKEFAEEIKAEAYQYNGFNLIVADIST 120
           KVAFVTNVLEPHEIP+AKSRG+LPLLFLQSTKSPKEFAEEIKAEAY+YNGFNL+VADIST
Sbjct: 61  KVAFVTNVLEPHEIPEAKSRGNLPLLFLQSTKSPKEFAEEIKAEAYRYNGFNLVVADIST 120

Query: 121 KTMIYISNRTKGDHILIQEVPPGLHVLSNAELDTAWHKVQRLRLKFNEQLCIYAEGEIP 180
           KTM+YISNRTKGDHILIQEVPPGLHVLSNAELD+AWHKVQRLRLKFNEQL IY EGEIP
Sbjct: 121 KTMVYISNRTKGDHILIQEVPPGLHVLSNAELDSAWHKVQRLRLKFNEQLRIYGEGEIP 179

[Close]

BLAST of CsaV3_1G014380 vs. NCBI nr
Match: XP_022153121.1 (transport and Golgi organization 2 homolog [Momordica charantia] >XP_022153123.1 transport and Golgi organization 2 homolog [Momordica charantia] >XP_022153124.1 transport and Golgi organization 2 homolog [Momordica charantia] >XP_022153125.1 transport and Golgi organization 2 homolog [Momordica charantia] >XP_022153126.1 transport and Golgi organization 2 homolog [Momordica charantia])

HSP 1 Score: 306.2 bits (783), Expect = 7.3e-80
Identity = 143/179 (79.89%), Postives = 158/179 (88.27%), Query Frame = 0


Query: 1   MCIAAFVWQSHSLYSLILFQNRDEYHNRPTKPMSWWEDNEIAGGRDEVGGGTWLGCSRKG 60
           MCIAAF+WQSH LYSLIL  NRDE  NRPT+P SWWED EIAGGRDEV GGTWL CSRKG
Sbjct: 1   MCIAAFLWQSHPLYSLILLHNRDELLNRPTRPASWWEDGEIAGGRDEVAGGTWLACSRKG 60

Query: 61  KVAFVTNVLEPHEIPDAKSRGHLPLLFLQSTKSPKEFAEEIKAEAYQYNGFNLIVADIST 120
           +V+FVTNVLE H +P+AKSRG+LPLLFLQS KSPKEFAEEI+AEAYQYNGFNL+VADIS+
Sbjct: 61  RVSFVTNVLELHTLPEAKSRGNLPLLFLQSRKSPKEFAEEIRAEAYQYNGFNLVVADISS 120

Query: 121 KTMIYISNRTKGDHILIQEVPPGLHVLSNAELDTAWHKVQRLRLKFNEQLCIYAEGEIP 180
            TM+YISNR++GD I+IQEVPPGLHVLSNAELD+ WHK QRLRLKFNEQL     GEIP
Sbjct: 121 NTMVYISNRSEGDRIVIQEVPPGLHVLSNAELDSPWHKAQRLRLKFNEQLHKCDGGEIP 179

[Close]

BLAST of CsaV3_1G014380 vs. TAIR10
Match: AT4G38260.1 (Protein of unknown function (DUF833))

HSP 1 Score: 223.4 bits (568), Expect = 1.1e-58
Identity = 105/179 (58.66%), Postives = 125/179 (69.83%), Query Frame = 0


Query: 1   MCIAAFVWQSHSLYSLILFQNRDEYHNRPTKPMSWWEDNEIAGGRDEVGGGTWLGCSRKG 60
           MCIA F+WQSH LY  +LF NRDE HNR T+ + WWED E  GGRD VGGGTWLGC+R G
Sbjct: 1   MCIAVFLWQSHPLYPFLLFLNRDEDHNRATEALRWWEDGETVGGRDLVGGGTWLGCTRHG 60

Query: 61  KVAFVTNVLEPHEIPDAKSRGHLPLLFLQSTKSPKEFAEEIKAEAYQYNGFNLIVADIST 120
           ++AF+TN  E    P AKSRG LPL +LQS KSP EFAEEI+ E   YNGFNL+VA + +
Sbjct: 61  RLAFLTNFKEASSFPAAKSRGDLPLRYLQSEKSPAEFAEEIQDEISLYNGFNLVVAHVLS 120

Query: 121 KTMIYISNRTKGDHILIQEVPPGLHVLSNAELDTAWHKVQRLRLKFNEQLCIYAEGEIP 180
           K+MIYI+NR      L+ +V PG+HVLSNA LD+ W K  RLR  F + L     GE P
Sbjct: 121 KSMIYITNRPPHGDKLVTQVSPGIHVLSNANLDSPWPKCLRLREGFQQLLAENGSGEFP 179

[Close]

BLAST of CsaV3_1G014380 vs. TAIR10
Match: AT1G20730.1 (Protein of unknown function (DUF833))

HSP 1 Score: 90.1 bits (222), Expect = 1.5e-18
Identity = 60/178 (33.71%), Postives = 99/178 (55.62%), Query Frame = 0


Query: 1   MCIAAFVWQSHSLYSLILFQNRDEYHNRPTKPMSW-WEDNEIAGGRDEVGGGTWLGCSRK 60
           M I AF W       L L QNR+ + +R     +W W+++++  GR     GTWLG S +
Sbjct: 1   MGIVAFQW-GEGENILTLLQNRENWQSRSIGKAAWEWDESQVLSGRCAETDGTWLGISIR 60

Query: 61  GKVAFVTNV--LEPHEIPDAKSRGHLPLLFLQSTKSPKEFAEEIKAEAYQYNG--FNLIV 120
           G+VAF+     +    I  A+ R    L FL+S  SP++FA+ +  ++ +  G  ++LIV
Sbjct: 61  GRVAFLVEAGPVNRDRIIGAECR---TLDFLKSNLSPEDFADSLALDSGRNTGIAYHLIV 120

Query: 121 ADISTKTMIYI--SNRTKGDHILIQEVPPGLHVLSNAELDT-AWHKVQRLRLKFNEQL 171
           ADI + +M YI   + ++   +  + V PG+H LS+A LD+   H+  RL+  F+E++
Sbjct: 121 ADIVSNSMFYIYKPSLSEDGMVYTEPVGPGVHTLSSAGLDSEVGHRDLRLKRYFSERI 174

[Close]

BLAST of CsaV3_1G014380 vs. TAIR10
Match: AT1G20740.1 (Protein of unknown function (DUF833))

HSP 1 Score: 77.8 bits (190), Expect = 7.6e-15
Identity = 51/142 (35.92%), Postives = 80/142 (56.34%), Query Frame = 0


Query: 37  EDNEIAGGRDEVGGGTWLGCSRKGKVAFV--TNVLEPHEIPDAKSRGHLPLLFLQSTKSP 96
           E ++I  GR     GTWLG S +G+VAF+     +       A+SR    L FL+S +SP
Sbjct: 46  ETDQILSGRCPETDGTWLGISTRGRVAFLVEAGTINRDRFNGAESR---TLEFLESNESP 105

Query: 97  KEFAEEIKAEAYQYN---GFNLIVADISTKTMIYISNRTKGDH--ILIQEVPPGLHVLSN 156
           ++FA+   A+  +      F+LIVADI++ +M+YIS     D+  +  + V PG+H LS+
Sbjct: 106 EDFAKSSAADYIRNKNTAAFHLIVADIASNSMLYISKPRFSDYGIVYTEPVGPGVHTLSS 165

Query: 157 AELDT-AWHKVQRLRLKFNEQL 171
           A LD+   ++  R+R  F E +
Sbjct: 166 AGLDSDVGYRDLRMRHSFCEMI 184

[Close]

BLAST of CsaV3_1G014380 vs. TAIR10
Match: AT1G20680.1 (Protein of unknown function (DUF833))

HSP 1 Score: 68.2 bits (165), Expect = 6.0e-12
Identity = 40/123 (32.52%), Postives = 69/123 (56.10%), Query Frame = 0


Query: 34  SWWEDNEIAGGRDEVGGGTWLGCSRKGKVAFVTNVLEPHEIPDAKSRGHLPLLFLQSTKS 93
           SW  + +I  GR +   GTW G ++ G+VAF+ N     +   + S   L         S
Sbjct: 42  SWSRNGQILSGRCKANNGTWFGITKGGRVAFLVNTSLLLDRVKSYSGSEL----YPGNMS 101

Query: 94  PKEFAEEIKA---EAYQYNGFNLIVADISTKTMIYI--SNRTKGDHILIQEVPPGLHVLS 152
           P++FA E+K    E  + + ++L+VAD+++ +M++I   + TK D ++I+ VP G+H LS
Sbjct: 102 PEQFANEVKVHEKETNERHAYSLVVADMTSSSMVHILKPSDTKSD-VVIETVPFGVHTLS 159

[Close]

BLAST of CsaV3_1G014380 vs. Swiss-Prot
Match: sp|P54797|TNG2_MOUSE (Transport and Golgi organization 2 homolog OS=Mus musculus OX=10090 GN=Tango2 PE=1 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 7.5e-28
Identity = 77/185 (41.62%), Postives = 106/185 (57.30%), Query Frame = 0


Query: 1   MCIAAFVWQ----SHSLYSLILFQNRDEYHNRPTKPMSWWEDN-EIAGGRD-EVG--GGT 60
           MCI  F +     S + Y LIL  NRDE++NRP+K   +W +N EI  G D E G  GGT
Sbjct: 1   MCIIFFKFDPRPVSKNAYRLILAANRDEFYNRPSKLADFWGNNSEILSGLDMEEGKAGGT 60

Query: 61  WLGCSRKGKVAFVTNVLEPHEIPDAKSRGHLPLLFLQSTKSPKEFAEEIKAEAYQYNGFN 120
           WLG S +GK+  +TN L+P + PDA+ RG L   FL S      + +++  E + YNGFN
Sbjct: 61  WLGISTRGKLGALTNYLQPRQEPDARGRGELVSHFLTSDMDSLSYLKKVSTEGHLYNGFN 120

Query: 121 LIVADISTK---TMIYISNRTKGDHILIQEVPPGLHVLSNAELDTAWHKVQRLRLKFNEQ 175
           +I AD+ST     + Y  NR + + I++    PG + LSNA L+T W K     L F +Q
Sbjct: 121 IIAADLSTSKGDVVCYYGNRGEPEPIVL---TPGTYGLSNALLETPWKK-----LCFGKQ 177

[Close]

BLAST of CsaV3_1G014380 vs. Swiss-Prot
Match: sp|Q29RZ5|TNG2_BOVIN (Transport and Golgi organization protein 2 homolog OS=Bos taurus OX=9913 GN=TANGO2 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 5.4e-26
Identity = 73/185 (39.46%), Postives = 105/185 (56.76%), Query Frame = 0


Query: 1   MCIAAFVWQ----SHSLYSLILFQNRDEYHNRPTKPMSWW-EDNEIAGGRD-EVG--GGT 60
           MCI  F +     S + Y LIL  NRDE+++RP +   +W  +NE+  G D E G  GGT
Sbjct: 1   MCIIFFKFDPRPVSKNAYRLILAANRDEFYHRPARAADFWGSNNEVLSGLDMEEGKEGGT 60

Query: 61  WLGCSRKGKVAFVTNVLEPHEIPDAKSRGHLPLLFLQSTKSPKEFAEEIKAEAYQYNGFN 120
           WLG S +GK+A +TN L+P    +A+ RG L   FL S      + +++ AE + YNGFN
Sbjct: 61  WLGISTRGKLAALTNYLQPRLNRNARGRGELVAQFLTSDMDSLSYLKKVSAEGHLYNGFN 120

Query: 121 LIVADISTK---TMIYISNRTKGDHILIQEVPPGLHVLSNAELDTAWHKVQRLRLKFNEQ 175
           LI AD+S +    + Y  NR + + +++    PG + LSNA L+T W K     L F +Q
Sbjct: 121 LIAADLSAEKGDVICYYGNRGEREPVVL---APGTYGLSNALLETPWRK-----LCFGKQ 177

[Close]

BLAST of CsaV3_1G014380 vs. Swiss-Prot
Match: sp|Q6ICL3|TNG2_HUMAN (Transport and Golgi organization protein 2 homolog OS=Homo sapiens OX=9606 GN=TANGO2 PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 9.2e-26
Identity = 76/185 (41.08%), Postives = 104/185 (56.22%), Query Frame = 0


Query: 1   MCIAAFVWQ----SHSLYSLILFQNRDEYHNRPTKPMSWW-EDNEIAGGRD-EVG--GGT 60
           MCI  F +     S + Y LIL  NRDE+++RP+K   +W  +NEI  G D E G  GGT
Sbjct: 1   MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGT 60

Query: 61  WLGCSRKGKVAFVTNVLEPHEIPDAKSRGHLPLLFLQSTKSPKEFAEEIKAEAYQYNGFN 120
           WLG S +GK+A +TN L+P     A+ RG L   FL +      + +++  E + YNGFN
Sbjct: 61  WLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGFN 120

Query: 121 LIVADIST---KTMIYISNRTKGDHILIQEVPPGLHVLSNAELDTAWHKVQRLRLKFNEQ 175
           LI AD+ST     + Y  NR + D I++    PG + LSNA L+T W K     L F +Q
Sbjct: 121 LIAADLSTAKGDVICYYGNRGEPDPIVL---TPGTYGLSNALLETPWRK-----LCFGKQ 177

[Close]

BLAST of CsaV3_1G014380 vs. Swiss-Prot
Match: sp|P53275|YG37_YEAST (Uncharacterized protein YGR127W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YGR127W PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 5.1e-08
Identity = 54/188 (28.72%), Postives = 78/188 (41.49%), Query Frame = 0


Query: 1   MCIAAFVWQSHSLYSLILFQNRDEYHNRPTKPMSWWEDNEIAGGRDEVGG-------GTW 60
           MCI     ++H  Y LIL  NRDE+  R T    W  ++ I    D           GTW
Sbjct: 1   MCI-LMATRAHPDYELILISNRDEFLARKTHATCWHNNDFILSPYDLAKTSAEKQIFGTW 60

Query: 61  LGCSRKGKVAFVTNVLEPHEIPDAK--SRGHLPLLFLQSTKSPKEFAEEIKAEAYQYNG- 120
            G +++GK+A + N+   +E  + K  SRG LP +FL   K+  E  +  K     Y+G 
Sbjct: 61  SGINKEGKLATILNLKLDNEQNNTKSRSRGLLPFIFLSIHKADFEDWDNYKKFEGHYDGL 120

Query: 121 -----FNLIVADISTK----------TMIYISNRTKGDHILIQEVPPGLHVLSNAELDTA 164
                FN    D+  K          T   +S+  + D      V  G    S++    A
Sbjct: 121 KSTGDFNFFYGDVIKKQYKVIDSLGRTFDVLSSTCRKDLDSYMVVSNGKFYDSSSIPGQA 180

[Close]

BLAST of CsaV3_1G014380 vs. Swiss-Prot
Match: sp|Q9VYA8|TNG2_DROME (Transport and Golgi organization protein 2 OS=Drosophila melanogaster OX=7227 GN=Tango2 PE=2 SV=2)

HSP 1 Score: 51.2 bits (121), Expect = 1.4e-05
Identity = 48/166 (28.92%), Postives = 74/166 (44.58%), Query Frame = 0


Query: 1   MCIAAFVWQSHSL---YSLILFQNRDEYHNRPTKPMSWWED-NEIAGGRD-EVG--GGTW 60
           MC+  F   S+     Y LIL  NRDE+  R T   + W + + + GG D E G  GGTW
Sbjct: 1   MCVIFFCADSNPQPGGYKLILASNRDEFFARATLSAAKWANADHVYGGIDLEPGREGGTW 60

Query: 61  LGCSRKG---KVAFVTNVLEPHEIPDAKSRGHLPLLFLQSTKSPKE-----FAEEIKAEA 120
           L         KV  + N+    +  DA  RG +   ++  T++ +E     + E +  + 
Sbjct: 61  LAIGHSAGFFKVGALLNLTGEPKPRDAVGRGMIVADYV--TRADEEHSILNYNERLLKDC 120

Query: 121 YQYNGFNLIVADISTKTMIYISNRTKGDHILIQEVPPGLHVLSNAE 152
            +Y+ FN +  +I + +      R K    L+  VPP L    N E
Sbjct: 121 TKYSAFNFVSIEIGSASQ---PARVK----LLSNVPPTLEDFQNGE 157

[Close]

BLAST of CsaV3_1G014380 vs. TrEMBL
Match: tr|A0A0A0LSJ0|A0A0A0LSJ0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G144330 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 2.0e-102
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MCIAAFVWQSHSLYSLILFQNRDEYHNRPTKPMSWWEDNEIAGGRDEVGGGTWLGCSRKG 60
           MCIAAFVWQSHSLYSLILFQNRDEYHNRPTKPMSWWEDNEIAGGRDEVGGGTWLGCSRKG
Sbjct: 139 MCIAAFVWQSHSLYSLILFQNRDEYHNRPTKPMSWWEDNEIAGGRDEVGGGTWLGCSRKG 198

Query: 61  KVAFVTNVLEPHEIPDAKSRGHLPLLFLQSTKSPKEFAEEIKAEAYQYNGFNLIVADIST 120
           KVAFVTNVLEPHEIPDAKSRGHLPLLFLQSTKSPKEFAEEIKAEAYQYNGFNLIVADIST
Sbjct: 199 KVAFVTNVLEPHEIPDAKSRGHLPLLFLQSTKSPKEFAEEIKAEAYQYNGFNLIVADIST 258

Query: 121 KTMIYISNRTKGDHILIQEVPPGLHVLSNAELDTAWHKVQRLRLKFNEQLCIYAEGEIP 180
           KTMIYISNRTKGDHILIQEVPPGLHVLSNAELDTAWHKVQRLRLKFNEQLCIYAEGEIP
Sbjct: 259 KTMIYISNRTKGDHILIQEVPPGLHVLSNAELDTAWHKVQRLRLKFNEQLCIYAEGEIP 317

[Close]

BLAST of CsaV3_1G014380 vs. TrEMBL
Match: tr|A0A1S3CGF4|A0A1S3CGF4_CUCME (transport and Golgi organization 2 homolog OS=Cucumis melo OX=3656 GN=LOC103500621 PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 1.5e-97
Identity = 170/179 (94.97%), Postives = 177/179 (98.88%), Query Frame = 0


Query: 1   MCIAAFVWQSHSLYSLILFQNRDEYHNRPTKPMSWWEDNEIAGGRDEVGGGTWLGCSRKG 60
           MCIAAFVWQSHSLYSLILFQNRDEYHNRPTKPMSWWED+EIAGGRDEVGGGTWLGCSRKG
Sbjct: 1   MCIAAFVWQSHSLYSLILFQNRDEYHNRPTKPMSWWEDHEIAGGRDEVGGGTWLGCSRKG 60

Query: 61  KVAFVTNVLEPHEIPDAKSRGHLPLLFLQSTKSPKEFAEEIKAEAYQYNGFNLIVADIST 120
           KVAFVTNVLEPHEIP+AKSRG+LPLLFLQSTKSPKEFAEEIKAEAY+YNGFNL+VADIST
Sbjct: 61  KVAFVTNVLEPHEIPEAKSRGNLPLLFLQSTKSPKEFAEEIKAEAYRYNGFNLVVADIST 120

Query: 121 KTMIYISNRTKGDHILIQEVPPGLHVLSNAELDTAWHKVQRLRLKFNEQLCIYAEGEIP 180
           KTM+YISNRTKGDHILIQEVPPGLHVLSNAELD+AWHKVQRLRLKFNEQL IY EGEIP
Sbjct: 121 KTMVYISNRTKGDHILIQEVPPGLHVLSNAELDSAWHKVQRLRLKFNEQLRIYGEGEIP 179

[Close]

BLAST of CsaV3_1G014380 vs. TrEMBL
Match: tr|A0A2I4DPG2|A0A2I4DPG2_9ROSI (transport and Golgi organization 2 homolog OS=Juglans regia OX=51240 GN=LOC108982189 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 2.0e-73
Identity = 126/179 (70.39%), Postives = 151/179 (84.36%), Query Frame = 0


Query: 1   MCIAAFVWQSHSLYSLILFQNRDEYHNRPTKPMSWWEDNEIAGGRDEVGGGTWLGCSRKG 60
           MCIAAF WQ H L+  ++FQNRDEYHNRPTK ++WWE  +I GGRDEV GGTWL CSR G
Sbjct: 1   MCIAAFAWQVHPLFPFLVFQNRDEYHNRPTKQVAWWEGGDILGGRDEVAGGTWLACSRGG 60

Query: 61  KVAFVTNVLEPHEIPDAKSRGHLPLLFLQSTKSPKEFAEEIKAEAYQYNGFNLIVADIST 120
           +VAF+TNVLE H +P+AKSRG LP+LFL+STK+PKEFAEE+K EA+QYNGFNLIVADIS+
Sbjct: 61  RVAFLTNVLELHILPEAKSRGDLPVLFLESTKTPKEFAEELKTEAHQYNGFNLIVADISS 120

Query: 121 KTMIYISNRTKGDHILIQEVPPGLHVLSNAELDTAWHKVQRLRLKFNEQLCIYAEGEIP 180
           K+M+Y+SNR KG+ I IQEV PG+HVLSNA+LD+ WHK QRL   F EQLC Y +GE+P
Sbjct: 121 KSMVYVSNRPKGEPIAIQEVSPGIHVLSNAKLDSPWHKAQRLGPSFKEQLCKYGKGEVP 179

[Close]

BLAST of CsaV3_1G014380 vs. TrEMBL
Match: tr|A0A1Q3D6N3|A0A1Q3D6N3_CEPFO (NRDE domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_31560 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 2.0e-73
Identity = 129/179 (72.07%), Postives = 153/179 (85.47%), Query Frame = 0


Query: 1   MCIAAFVWQSHSLYSLILFQNRDEYHNRPTKPMSWWEDNEIAGGRDEVGGGTWLGCSRKG 60
           MCIAAFVWQ+H LY L+L QNRDEYH+RPTKP++WW+D EI GGRDEV GGTWL CSR+G
Sbjct: 1   MCIAAFVWQAHPLYPLLLLQNRDEYHDRPTKPVAWWDDCEILGGRDEVAGGTWLACSREG 60

Query: 61  KVAFVTNVLEPHEIPDAKSRGHLPLLFLQSTKSPKEFAEEIKAEAYQYNGFNLIVADIST 120
           +V+F+TNVLE H +P+AKSRG LP+ FL+STKSPKEFAE++  EA+QYNGFNLIVADIS+
Sbjct: 61  RVSFLTNVLELHTLPEAKSRGDLPVRFLESTKSPKEFAEKLATEAHQYNGFNLIVADISS 120

Query: 121 KTMIYISNRTKGDHILIQEVPPGLHVLSNAELDTAWHKVQRLRLKFNEQLCIYAEGEIP 180
           KTM+YISNR KG+ I+IQEV PG+HVLSNA+LD+ WHK QRL L F E L    EGEIP
Sbjct: 121 KTMVYISNRPKGEPIIIQEVSPGIHVLSNAKLDSPWHKAQRLGLNFTELLDKCGEGEIP 179

[Close]

BLAST of CsaV3_1G014380 vs. TrEMBL
Match: tr|V4SLH2|V4SLH2_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10002169mg PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.3e-72
Identity = 124/179 (69.27%), Postives = 149/179 (83.24%), Query Frame = 0


Query: 1   MCIAAFVWQSHSLYSLILFQNRDEYHNRPTKPMSWWEDNEIAGGRDEVGGGTWLGCSRKG 60
           MCIAAF+WQ+H LY   L QNRDEYH RPTKP++WW+  EI GGRDE+ GGTWL CSR G
Sbjct: 1   MCIAAFIWQAHPLYPFFLLQNRDEYHQRPTKPVAWWDSGEILGGRDELAGGTWLACSRTG 60

Query: 61  KVAFVTNVLEPHEIPDAKSRGHLPLLFLQSTKSPKEFAEEIKAEAYQYNGFNLIVADIST 120
           +VAF+TNVLE H +P+AKSRG LP+LFL+STKSP EFAEE+  EA+QYNGFNLIVAD+S+
Sbjct: 61  RVAFLTNVLELHTLPEAKSRGDLPVLFLESTKSPMEFAEELVTEAHQYNGFNLIVADVSS 120

Query: 121 KTMIYISNRTKGDHILIQEVPPGLHVLSNAELDTAWHKVQRLRLKFNEQLCIYAEGEIP 180
           K+M+Y+SNR KG+ I IQEV PG+HVLSNA+LD+ WHK QRL L F EQL  Y +G+IP
Sbjct: 121 KSMVYVSNRPKGEPITIQEVSPGIHVLSNAKLDSPWHKAQRLGLNFREQLAKYGKGQIP 179

The following BLAST results are available for this feature:

BLAST of CsaV3_1G014380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011654174.1	3.0e-102	100.00	PREDICTED: transport and Golgi organization 2 homolog isoform X1 [Cucumis sativu...	[more]
KGN64880.1	3.0e-102	100.00	hypothetical protein Csa_1G144330 [Cucumis sativus]	[more]
XP_011654190.1	3.0e-102	100.00	PREDICTED: transport and Golgi organization 2 homolog isoform X2 [Cucumis sativu...	[more]
XP_008462211.1	2.2e-97	94.97	PREDICTED: transport and Golgi organization 2 homolog [Cucumis melo] >XP_0084622...	[more]
XP_022153121.1	7.3e-80	79.89	transport and Golgi organization 2 homolog [Momordica charantia] >XP_022153123.1...	[more]

BLAST of CsaV3_1G014380 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38260.1	1.1e-58	58.66	Protein of unknown function (DUF833)	[more]
AT1G20730.1	1.5e-18	33.71	Protein of unknown function (DUF833)	[more]
AT1G20740.1	7.6e-15	35.92	Protein of unknown function (DUF833)	[more]
AT1G20680.1	6.0e-12	32.52	Protein of unknown function (DUF833)	[more]

BLAST of CsaV3_1G014380 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P54797\|TNG2_MOUSE	7.5e-28	41.62	Transport and Golgi organization 2 homolog OS=Mus musculus OX=10090 GN=Tango2 PE...	[more]
sp\|Q29RZ5\|TNG2_BOVIN	5.4e-26	39.46	Transport and Golgi organization protein 2 homolog OS=Bos taurus OX=9913 GN=TANG...	[more]
sp\|Q6ICL3\|TNG2_HUMAN	9.2e-26	41.08	Transport and Golgi organization protein 2 homolog OS=Homo sapiens OX=9606 GN=TA...	[more]
sp\|P53275\|YG37_YEAST	5.1e-08	28.72	Uncharacterized protein YGR127W OS=Saccharomyces cerevisiae (strain ATCC 204508 ...	[more]
sp\|Q9VYA8\|TNG2_DROME	1.4e-05	28.92	Transport and Golgi organization protein 2 OS=Drosophila melanogaster OX=7227 GN...	[more]

BLAST of CsaV3_1G014380 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LSJ0\|A0A0A0LSJ0_CUCSA	2.0e-102	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G144330 PE=4 SV=1	[more]
tr\|A0A1S3CGF4\|A0A1S3CGF4_CUCME	1.5e-97	94.97	transport and Golgi organization 2 homolog OS=Cucumis melo OX=3656 GN=LOC1035006...	[more]
tr\|A0A2I4DPG2\|A0A2I4DPG2_9ROSI	2.0e-73	70.39	transport and Golgi organization 2 homolog OS=Juglans regia OX=51240 GN=LOC10898...	[more]
tr\|A0A1Q3D6N3\|A0A1Q3D6N3_CEPFO	2.0e-73	72.07	NRDE domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_315...	[more]
tr\|V4SLH2\|V4SLH2_9ROSI	1.3e-72	69.27	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10002169mg PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008551	TANGO2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0080019	fatty-acyl-CoA reductase (alcohol-forming) activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G014380.1	CsaV3_1G014380.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008551	Transport and Golgi organisation protein 2	PFAM	PF05742	TANGO2	coord: 1..169 e-value: 2.0E-57 score: 195.0
IPR008551	Transport and Golgi organisation protein 2	PANTHER	PTHR17985	SER/THR-RICH PROTEIN T10 IN DGCR REGION	coord: 1..179
None	No IPR available	PANTHER	PTHR17985:SF16	SUBFAMILY NOT NAMED	coord: 1..179

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G014380	CSPI01G14190	Wild cucumber (PI 183967)	cpicucB001
CsaV3_1G014380	Cucsa.200160	Cucumber (Gy14) v1	cgycucB322
CsaV3_1G014380	CsGy1G014160	Cucumber (Gy14) v2	cgybcucB002
CsaV3_1G014380	MELO3C004825	Melon (DHL92) v3.5.1	cucmeB010
CsaV3_1G014380	MELO3C004825.2	Melon (DHL92) v3.6.1	cucmedB009
CsaV3_1G014380	Cla97C01G011980	Watermelon (97103) v2	cucwmbB008

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G014380	Silver-seed gourd	carcucB0192
CsaV3_1G014380	Cucurbita maxima (Rimu)	cmacucB0188
CsaV3_1G014380	Cucurbita maxima (Rimu)	cmacucB0234
CsaV3_1G014380	Cucurbita maxima (Rimu)	cmacucB0694
CsaV3_1G014380	Cucurbita moschata (Rifu)	cmocucB0172
CsaV3_1G014380	Cucurbita moschata (Rifu)	cmocucB0221
CsaV3_1G014380	Cucurbita pepo (Zucchini)	cpecucB0635
CsaV3_1G014380	Bottle gourd (USVL1VR-Ls)	cuclsiB005
CsaV3_1G014380	Bottle gourd (USVL1VR-Ls)	cuclsiB048
CsaV3_1G014380	Watermelon (Charleston Gray)	cucwcgB016
CsaV3_1G014380	Watermelon (Charleston Gray)	cucwcgB026
CsaV3_1G014380	Watermelon (Charleston Gray)	cucwcgB030
CsaV3_1G014380	Watermelon (97103) v1	cucwmB052
CsaV3_1G014380	Watermelon (97103) v1	cucwmB060
CsaV3_1G014380	Watermelon (97103) v1	cucwmB074
CsaV3_1G014380	Watermelon (97103) v2	cucwmbB002
CsaV3_1G014380	Watermelon (97103) v2	cucwmbB025
CsaV3_1G014380	Wax gourd	cucwgoB051