CsaV3_1G014100 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G014100
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Pheophorbide A oxygenase, putative
Location	chr1 : 9592433 .. 9595155 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTGAGTTCTCATCAGTTATGATTCGGTGGGATCTATTTTATGGTAATGATACACTAATGGAGAATGTATCAGATCCTTCCCACATAGATCTTGCTCATCACCAAGGTAAGGGAGGGCCAATGTGAAAGAACTTGTTTCAATGAACTTGTTTCAATTAAACTTGAAATATGCACCAGTGGTTTAGTTATTGATTGAATCGTTATGCTTGTTTGTGTTTCTGTTCTTTCTGTTTCTGATGGATGCCTAGTGAAAGAAATGTGTCACATATAAAGAACCAAAAAACTTCAATGGTACCTGCTGGGTGCTGTTAAATATTTACTATGATTTAGAAGAGATTGTGTTTTCAAGAAACAAGAACATTTGATAGGAACAGTCCTGAATCTGATGATACGGCAGTACTGTACTTCGAGTACAGTAGTAAACTTGGTCTAGAAAGTCACATTTGTTTTTTGTTGAACATCTCAATGTCTTGCTTCTGAAAAGGAACATCTTCACAGGTGACAGGGAGGCGAGACTGGGCTTAACCTTTACCTTTCAAGTTGAATTCTAATGGTTCCTGTCCTGGGGATTTTCTGGAGCAAATAAGGGTAACCCAAGGATTTGTGCCAAGTTTATTGCTCCTCTTGTTACTATATCAACAAGTAAGGATTTCACTCTTTTTCTGCTGTATTCACATTTGAATAATGTATAGCTTAAGATTGTTGGAACCATCCCTTGCATCTCTGATATTATATATCAATAGATATGCTTATGCAATTATGATGTGATTAGGTACCTCATGCATTAAGCGAAACATTTGTGGTAGCTTAGTATAATGGCTGACAGAATGATAGTTTATTGACAGTGAGCTATCTCTCTCAATTCTATCCCAAATTTGACCTGCCTTCTCTTGCATCTCTGTCTTCCTTTTAAACATCTCACTACTAACAACCTAACTATTTCACTTGCTTTTCCCAAACATATGCATAGAAAGTTTCTTTTCAATGATTATTTTACCCCTTGATCCTAACGTATGACCAAGTGGGCATGGGCATAAGCTTCAGTCGCTACCAAGTGTCAGTTTGGGTTATACATGCAAGGAAAAGAAAAAAAAAATCATTTCTCACTCTTTCTTTTTGGAAGCATTCCTGGATGCAAATTTTAATAACTTTAGTATGAGGAGGTAAGTATTATTCTTAAGAAAATTTTAATATTTGAAGCAAAGTATTTCTATTAATACTGTAGAGTTGGAAACGGTAGTTAATAATAAGTGACCAGAGGAACCCAAGCACGTGAGACTTGAGACTTGAGTGTATTTGACCTCTTTTAGGTTTCGGAATTTTTATAATATTTCCTCTACGAGAAAGACAATATGTGCCATTTGAAATTATAGCTCTAGGAAATGGAATGCAAAAAGAAATTAGAAAACTTTGGTAGGAAAGGTAACGTTGATGTTAGGAAAATTGCAAGTGCATTTGCTGTGCATCTTTGATAAAAGGAATGTGTCATCAGTTATGGAGGTGAGAGGATACTGAGAGGACGGTAATTGAACCATAGCTCCAAGTTAGATGCAATGAGCATGGGGTACGAAATGAATAACGGAGTAGTCTGAAATAAGTGTTCCAAGTAAGAGTACACGGGATTTATTAATTGCCAAAGTAGGTTTGGACTGGGTGAGCTTTTTGGAATGTACATCCTCATTCCATCTTACGCATTCAAGAAAGAAGGCAAGTCAAGGCTGATAGTTAACTGTTGTGTGGTTTAAGGAAAGGAGAATTGAATAGTAAGAACTAACTAGAGGTTCTATAGCAACACCCTACTGAATTTATAGGCAACTGTTTCTACATTCTATTCCTTTTGTTTAAGTGCTAAACATTTCGAATCCCTTATAAACAATTTCTTATAGGTTTGAACTTTCAATGTAAACTTTTCTTCAGAGTGGAGATTGACACAAAGCTTCCTTTACTTGGCGATAAATGGATTTGCTCCCTCAATGTGCCAATGGGTCCTGGAAAAACTCGTTCTATTGTATAGTGCTCGAAACTTCTTCCAGTTTTCAATGCCCGGTCCTGCTTGGTGGCAAGTAAGCAGTCCGTGTTAATTAAATCTCTTTCTTATTTTTACGATATATTATCATCTCATTCCCTACCGTTATGGACCATTCAATATGCAATAATACGTTGTGATATTACAGTGTTTGACTTCCTAGTTTGCTTTTTCTAGTAGGTGGTTCCTCGATGGCACGAGCATTGGACATCGAATAAGGTATATGATGGAGACATGATTGTTCTTCAGGGGTCAGGAGAAGATATTTTTATCGATGGAAGGTTCGACAAAATGTAAATAAGAATATACACTAAAATAACGTTTACACCAACACAAGTGGATTGTTTGGTGCTAGCATTTCAAAATTGGCTGAGGCAGCACGGAAAAGGCCAACCTAAATGGTTTAGGGCTTGCAGCCAACAGCCTCTGCCATCAACAGTTCTATCCTACCATCGTCTGGATTGTTTCTATAAAACTAAATGCTAAAGGCACGAACACTTTATTTTGACTGAACGTCCGTGTGCAATTCCTCCAATTTTAACAATCCTAACGACTTAGTTTTTACTATTAAAATTAAAAATAAGTGTGGTTGATGAAACTCAGATTTTACGAATATAGTTTGTTAAAATATACGAAAACTATAAAATTGCGATTCTTGTACCAACGAGAAACATGAAAATTTTTTATAAGTTAC

mRNA sequence

ATGCCTGAGTTCTCATCAGTTATGATTCGGTGGGATCTATTTTATGGTAATGATACACTAATGGAGAATGTATCAGATCCTTCCCACATAGATCTTGCTCATCACCAAGAGTGGAGATTGACACAAAGCTTCCTTTACTTGGCGATAAATGGATTTGCTCCCTCAATGTGCCAATGGGTCCTGGAAAAACTCGTTCTATTGTATAGTGCTCGAAACTTCTTCCAGTTTTCAATGCCCGGTCCTGCTTGGTGGCAAGTGGTTCCTCGATGGCACGAGCATTGGACATCGAATAAGGTATATGATGGAGACATGATTGTTCTTCAGGGGTCAGGAGAAGATATTTTTATCGATGGAAGCACGGAAAAGGCCAACCTAAATGGTTTAGGGCTTGCAGCCAACAGCCTCTGCCATCAACAGTTCTATCCTACCATCGTCTGGATTGTTTCTATAAAACTAAATGCTAAAGGCACGAACACTTTATTTTGA

Coding sequence (CDS)

ATGCCTGAGTTCTCATCAGTTATGATTCGGTGGGATCTATTTTATGGTAATGATACACTAATGGAGAATGTATCAGATCCTTCCCACATAGATCTTGCTCATCACCAAGAGTGGAGATTGACACAAAGCTTCCTTTACTTGGCGATAAATGGATTTGCTCCCTCAATGTGCCAATGGGTCCTGGAAAAACTCGTTCTATTGTATAGTGCTCGAAACTTCTTCCAGTTTTCAATGCCCGGTCCTGCTTGGTGGCAAGTGGTTCCTCGATGGCACGAGCATTGGACATCGAATAAGGTATATGATGGAGACATGATTGTTCTTCAGGGGTCAGGAGAAGATATTTTTATCGATGGAAGCACGGAAAAGGCCAACCTAAATGGTTTAGGGCTTGCAGCCAACAGCCTCTGCCATCAACAGTTCTATCCTACCATCGTCTGGATTGTTTCTATAAAACTAAATGCTAAAGGCACGAACACTTTATTTTGA

Protein sequence

MPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQEWRLTQSFLYLAINGFAPSMCQWVLEKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFIDGSTEKANLNGLGLAANSLCHQQFYPTIVWIVSIKLNAKGTNTLF

Homology

[Close]

BLAST of CsaV3_1G014100 vs. NCBI nr
Match: KGN64853.1 (hypothetical protein Csa_1G132140 [Cucumis sativus])

HSP 1 Score: 350.5 bits (898), Expect = 3.0e-93
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQEWRLTQSFLYLAINGFAPSMCQWV 60
           MPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQEWRLTQSFLYLAINGFAPSMCQWV
Sbjct: 1   MPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQEWRLTQSFLYLAINGFAPSMCQWV 60

Query: 61  LEKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFIDGST 120
           LEKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFIDGST
Sbjct: 61  LEKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFIDGST 120

Query: 121 EKANLNGLGLAANSLCHQQFYPTIVWIVSIKLNAKGTNTLF 162
           EKANLNGLGLAANSLCHQQFYPTIVWIVSIKLNAKGTNTLF
Sbjct: 121 EKANLNGLGLAANSLCHQQFYPTIVWIVSIKLNAKGTNTLF 161

[Close]

BLAST of CsaV3_1G014100 vs. NCBI nr
Match: XP_008226706.1 (PREDICTED: pheophorbide a oxygenase, chloroplastic [Prunus mume])

HSP 1 Score: 141.7 bits (356), Expect = 2.1e-30
Identity = 81/172 (47.09%), Postives = 98/172 (56.98%), Query Frame = 0


Query: 2   PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW---- 61
           PEFSSV I+ DLFYG DTLMENVSDPSHID AHH+                    W    
Sbjct: 238 PEFSSVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKVEASGPWGFAG 297

Query: 62  ------RLTQSFL-------YLAINGFAPSM--CQWVL------------EKLVLLYSAR 121
                 R+T  F+        + I+   P +   +W++            +   ++ SAR
Sbjct: 298 ANEGNPRITAEFIAPSYYLNKIEIDTKLPLVGDKKWIIWICSFNVPMAPGKTRSIVCSAR 357

Query: 122 NFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFIDGSTEKA 124
           NFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQG  E +F+  S E++
Sbjct: 358 NFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGQ-EKVFLSKSKEES 408

[Close]

BLAST of CsaV3_1G014100 vs. NCBI nr
Match: XP_007208206.2 (pheophorbide a oxygenase, chloroplastic [Prunus persica] >ONI00956.1 hypothetical protein PRUPE_6G113600 [Prunus persica])

HSP 1 Score: 141.7 bits (356), Expect = 2.1e-30
Identity = 81/172 (47.09%), Postives = 98/172 (56.98%), Query Frame = 0


Query: 2   PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW---- 61
           PEFSSV I+ DLFYG DTLMENVSDPSHID AHH+                    W    
Sbjct: 238 PEFSSVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKVEASGPWGFAG 297

Query: 62  ------RLTQSFL-------YLAINGFAPSM--CQWVL------------EKLVLLYSAR 121
                 R+T  F+        + I+   P +   +W++            +   ++ SAR
Sbjct: 298 ANEGNPRITAEFIAPCYYLNKIEIDTKLPLVGDQKWIIWICSFNVPMAPGKTRSIVCSAR 357

Query: 122 NFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFIDGSTEKA 124
           NFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQG  E +F+  S E++
Sbjct: 358 NFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGQ-EKVFLSKSKEES 408

[Close]

BLAST of CsaV3_1G014100 vs. NCBI nr
Match: XP_024156933.1 (pheophorbide a oxygenase, chloroplastic [Rosa chinensis] >PRQ33345.1 putative pheophorbide a oxygenase [Rosa chinensis])

HSP 1 Score: 140.6 bits (353), Expect = 4.7e-30
Identity = 81/171 (47.37%), Postives = 97/171 (56.73%), Query Frame = 0


Query: 2   PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW---- 61
           PEFS+V I+ DLFYG DTLMENVSDPSHID AHH+                    W    
Sbjct: 236 PEFSTVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKLEDSGPWGFSG 295

Query: 62  ------RLTQSFL-------YLAINGFAPSM--CQWVL------------EKLVLLYSAR 121
                 R+T  F+        + I+   P +   +WV+            +   ++ SAR
Sbjct: 296 ANEGNPRITAKFIAPCYYLNKIEIDTKLPLVGDQKWVIWICSFNVPMAPGKTRSIVCSAR 355

Query: 122 NFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFIDGSTEK 123
           NFFQFSMPGPAWWQV+PRWHEHWTSNKVYDGDMIVLQG  E IF+  S E+
Sbjct: 356 NFFQFSMPGPAWWQVIPRWHEHWTSNKVYDGDMIVLQGQ-EKIFLSKSKEE 405

[Close]

BLAST of CsaV3_1G014100 vs. NCBI nr
Match: BAH84856.1 (putative pheide a oxygenase, partial [Cucumis sativus])

HSP 1 Score: 140.2 bits (352), Expect = 6.2e-30
Identity = 83/172 (48.26%), Postives = 99/172 (57.56%), Query Frame = 0


Query: 2   PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW---- 61
           PEFSSV I+ DLFYG DTLMENVSDPSHID AHH+                    W    
Sbjct: 10  PEFSSVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKLDTNGPWGFSG 69

Query: 62  ------RLTQSFL-------YLAINGFAPSM--CQWVL------------EKLVLLYSAR 121
                 R++  F+        + I+   P +   +WV+            +   ++ SAR
Sbjct: 70  ANKGNPRISAEFVAPCYYINKVEIDSKLPLLGDQKWVIWICSFNVPMGPGKTRSIVCSAR 129

[Close]

BLAST of CsaV3_1G014100 vs. TAIR10
Match: AT3G44880.1 (Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain)

HSP 1 Score: 132.1 bits (331), Expect = 3.1e-31
Identity = 77/170 (45.29%), Postives = 95/170 (55.88%), Query Frame = 0


Query: 2   PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW---- 61
           PEFS+V I+ DLFYG DTLMENVSDPSHID AHH+                    W    
Sbjct: 225 PEFSTVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKVESSGPWGFQG 284

Query: 62  ------RLTQSFL-------YLAINGFAPSM--CQWVL------------EKLVLLYSAR 121
                 R+T  F+        + ++   P +   +WV+            +   ++ SAR
Sbjct: 285 ANDDSPRITAKFVAPCYSMNKIELDAKLPIVGNQKWVIWICSFNIPMAPGKTRSIVCSAR 344

[Close]

BLAST of CsaV3_1G014100 vs. Swiss-Prot
Match: sp|Q9FYC2|PAO_ARATH (Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAO PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 5.5e-30
Identity = 77/170 (45.29%), Postives = 95/170 (55.88%), Query Frame = 0


Query: 2   PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW---- 61
           PEFS+V I+ DLFYG DTLMENVSDPSHID AHH+                    W    
Sbjct: 225 PEFSTVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKVESSGPWGFQG 284

Query: 62  ------RLTQSFL-------YLAINGFAPSM--CQWVL------------EKLVLLYSAR 121
                 R+T  F+        + ++   P +   +WV+            +   ++ SAR
Sbjct: 285 ANDDSPRITAKFVAPCYSMNKIELDAKLPIVGNQKWVIWICSFNIPMAPGKTRSIVCSAR 344

[Close]

BLAST of CsaV3_1G014100 vs. TrEMBL
Match: tr|A0A0A0LST3|A0A0A0LST3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132140 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 2.0e-93
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQEWRLTQSFLYLAINGFAPSMCQWV 60
           MPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQEWRLTQSFLYLAINGFAPSMCQWV
Sbjct: 1   MPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQEWRLTQSFLYLAINGFAPSMCQWV 60

Query: 61  LEKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFIDGST 120
           LEKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFIDGST
Sbjct: 61  LEKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFIDGST 120

Query: 121 EKANLNGLGLAANSLCHQQFYPTIVWIVSIKLNAKGTNTLF 162
           EKANLNGLGLAANSLCHQQFYPTIVWIVSIKLNAKGTNTLF
Sbjct: 121 EKANLNGLGLAANSLCHQQFYPTIVWIVSIKLNAKGTNTLF 161

[Close]

BLAST of CsaV3_1G014100 vs. TrEMBL
Match: tr|M5WRF3|M5WRF3_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa019738mg PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.4e-30
Identity = 81/172 (47.09%), Postives = 98/172 (56.98%), Query Frame = 0


Query: 2   PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW---- 61
           PEFSSV I+ DLFYG DTLMENVSDPSHID AHH+                    W    
Sbjct: 211 PEFSSVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKVEASGPWGFAG 270

Query: 62  ------RLTQSFL-------YLAINGFAPSM--CQWVL------------EKLVLLYSAR 121
                 R+T  F+        + I+   P +   +W++            +   ++ SAR
Sbjct: 271 ANEGNPRITAEFIAPCYYLNKIEIDTKLPLVGDQKWIIWICSFNVPMAPGKTRSIVCSAR 330

Query: 122 NFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFIDGSTEKA 124
           NFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQG  E +F+  S E++
Sbjct: 331 NFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGQ-EKVFLSKSKEES 381

[Close]

BLAST of CsaV3_1G014100 vs. TrEMBL
Match: tr|A0A251NNR8|A0A251NNR8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G113600 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.4e-30
Identity = 81/172 (47.09%), Postives = 98/172 (56.98%), Query Frame = 0


Query: 2   PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW---- 61
           PEFSSV I+ DLFYG DTLMENVSDPSHID AHH+                    W    
Sbjct: 238 PEFSSVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKVEASGPWGFAG 297

Query: 62  ------RLTQSFL-------YLAINGFAPSM--CQWVL------------EKLVLLYSAR 121
                 R+T  F+        + I+   P +   +W++            +   ++ SAR
Sbjct: 298 ANEGNPRITAEFIAPCYYLNKIEIDTKLPLVGDQKWIIWICSFNVPMAPGKTRSIVCSAR 357

Query: 122 NFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFIDGSTEKA 124
           NFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQG  E +F+  S E++
Sbjct: 358 NFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGQ-EKVFLSKSKEES 408

[Close]

BLAST of CsaV3_1G014100 vs. TrEMBL
Match: tr|A0A2P6QGN9|A0A2P6QGN9_ROSCH (Putative pheophorbide a oxygenase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0056561 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.1e-30
Identity = 81/171 (47.37%), Postives = 97/171 (56.73%), Query Frame = 0


Query: 2   PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW---- 61
           PEFS+V I+ DLFYG DTLMENVSDPSHID AHH+                    W    
Sbjct: 236 PEFSTVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKLEDSGPWGFSG 295

Query: 62  ------RLTQSFL-------YLAINGFAPSM--CQWVL------------EKLVLLYSAR 121
                 R+T  F+        + I+   P +   +WV+            +   ++ SAR
Sbjct: 296 ANEGNPRITAKFIAPCYYLNKIEIDTKLPLVGDQKWVIWICSFNVPMAPGKTRSIVCSAR 355

Query: 122 NFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFIDGSTEK 123
           NFFQFSMPGPAWWQV+PRWHEHWTSNKVYDGDMIVLQG  E IF+  S E+
Sbjct: 356 NFFQFSMPGPAWWQVIPRWHEHWTSNKVYDGDMIVLQGQ-EKIFLSKSKEE 405

[Close]

BLAST of CsaV3_1G014100 vs. TrEMBL
Match: tr|A0A2J6K5U1|A0A2J6K5U1_LACSA (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_1X64901 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 4.1e-30
Identity = 80/175 (45.71%), Postives = 98/175 (56.00%), Query Frame = 0


Query: 2   PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW---- 61
           PEFS+V I+ DLFYG DTLMENVSDPSHID AHH+                    W    
Sbjct: 224 PEFSTVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKMDSTGHWGFSG 283

Query: 62  ------RLTQSFL-------YLAINGFAPSM--CQWVL------------EKLVLLYSAR 121
                 +++  F+        + I+   P +   +WV+            +   ++ SAR
Sbjct: 284 ENEGNPKISAKFIAPCYYINKIEIDTKLPIVGDQKWVIWICSFNVPMSPGKTRSIVCSAR 343

Query: 122 NFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFIDGSTEKANLN 127
           NFFQF+MPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQG  E +F+  S E  N N
Sbjct: 344 NFFQFTMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGQ-EKVFLSQSMEDVNKN 397

The following BLAST results are available for this feature:

BLAST of CsaV3_1G014100 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN64853.1	3.0e-93	100.00	hypothetical protein Csa_1G132140 [Cucumis sativus]	[more]
XP_008226706.1	2.1e-30	47.09	PREDICTED: pheophorbide a oxygenase, chloroplastic [Prunus mume]	[more]
XP_007208206.2	2.1e-30	47.09	pheophorbide a oxygenase, chloroplastic [Prunus persica] >ONI00956.1 hypothetica...	[more]
XP_024156933.1	4.7e-30	47.37	pheophorbide a oxygenase, chloroplastic [Rosa chinensis] >PRQ33345.1 putative ph...	[more]
BAH84856.1	6.2e-30	48.26	putative pheide a oxygenase, partial [Cucumis sativus]	[more]

BLAST of CsaV3_1G014100 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G44880.1	3.1e-31	45.29	Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain	[more]

BLAST of CsaV3_1G014100 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FYC2\|PAO_ARATH	5.5e-30	45.29	Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAO P...	[more]

BLAST of CsaV3_1G014100 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LST3\|A0A0A0LST3_CUCSA	2.0e-93	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132140 PE=4 SV=1	[more]
tr\|M5WRF3\|M5WRF3_PRUPE	1.4e-30	47.09	Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa019738m...	[more]
tr\|A0A251NNR8\|A0A251NNR8_PRUPE	1.4e-30	47.09	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G113600 PE=4 SV=1	[more]
tr\|A0A2P6QGN9\|A0A2P6QGN9_ROSCH	3.1e-30	47.37	Putative pheophorbide a oxygenase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g00...	[more]
tr\|A0A2J6K5U1\|A0A2J6K5U1_LACSA	4.1e-30	45.71	Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_1X64901 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0010277	chlorophyllide a oxygenase [overall] activity

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

Vocabulary: **INTERPRO**
Term	Definition
IPR013626	PaO

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0009987	cellular process
biological_process	GO:0048731	system development
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0010277	chlorophyllide a oxygenase [overall] activity
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G014100.1	CsaV3_1G014100.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013626	Pheophorbide a oxygenase	PFAM	PF08417	PaO	coord: 69..110 e-value: 2.7E-7 score: 30.5
None	No IPR available	PANTHER	PTHR21266:SF24	PHEOPHORBIDE A OXYGENASE, CHLOROPLASTIC	coord: 2..36
None	No IPR available	PANTHER	PTHR21266:SF24	PHEOPHORBIDE A OXYGENASE, CHLOROPLASTIC	coord: 67..120
None	No IPR available	PANTHER	PTHR21266	IRON-SULFUR DOMAIN CONTAINING PROTEIN	coord: 67..120
None	No IPR available	PANTHER	PTHR21266	IRON-SULFUR DOMAIN CONTAINING PROTEIN	coord: 2..36

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G014100	CSPI01G13920	Wild cucumber (PI 183967)	cpicucB001
CsaV3_1G014100	Carg23702	Silver-seed gourd	carcucB0192
CsaV3_1G014100	Cla97C01G012850	Watermelon (97103) v2	cucwmbB002
CsaV3_1G014100	Bhi08G000125	Wax gourd	cucwgoB051

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G014100	Cucumber (Gy14) v2	cgybcucB002
CsaV3_1G014100	Cucumber (Gy14) v1	cgycucB322
CsaV3_1G014100	Cucurbita maxima (Rimu)	cmacucB0188
CsaV3_1G014100	Cucurbita maxima (Rimu)	cmacucB0234
CsaV3_1G014100	Cucurbita moschata (Rifu)	cmocucB0172
CsaV3_1G014100	Cucurbita moschata (Rifu)	cmocucB0221
CsaV3_1G014100	Cucurbita pepo (Zucchini)	cpecucB0635
CsaV3_1G014100	Cucurbita pepo (Zucchini)	cpecucB0996
CsaV3_1G014100	Bottle gourd (USVL1VR-Ls)	cuclsiB048
CsaV3_1G014100	Melon (DHL92) v3.5.1	cucmeB010
CsaV3_1G014100	Melon (DHL92) v3.6.1	cucmedB009
CsaV3_1G014100	Watermelon (Charleston Gray)	cucwcgB016
CsaV3_1G014100	Watermelon (97103) v1	cucwmB060