CSPI01G13920 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G13920
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Pheophorbide A oxygenase, putative
Location	Chr1 : 9521569 .. 9524095 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTGAGTTCTCATCAGTTATGATTCGGTGGGATCTATTTTATGGTAATGATACACTAATGGAGAATGTATCAGATCCTTCCCACATAGATCTTGCTCATCACCAAGGTAAGGGAGGGCCAATGTGAAAGAACTTGTTTCAATTAAACTTGAAATTTGCACCAGTGGTTTAGTTATTGATTGAATCGTTATGCTTGTTTGTGTTTCTGTTCTTTCTGTTTCTGATGGATGCCTAGTGAAAGAAATGTGTCACATATAAAGAACCAAAAAACTTCAATGGTACCTGCTGGGTGCTGTTAAATATCTACTATGATTTAGAAGAGATTGTGTTTTCAAGAAACAAGAACATTTGATAGGAACAGTCCTGAATCTGATGATATGGCAGTACTGTACTTCGAGTACAGTAGTAAACTTGGTCTAGAAAATCACATTTGTTTTTTGTTGAACATCTCAATGTCTTGCTTCTGAAAAGGAACATCGTCACAGGTGACAGGGAGGCGAGACTGGGCTTAACCTTTACCTTTCAAGTTGAATTCTAATGGTTCCTGTCCTGGGGATTTTCTGGAGCAAATAAGGGTAACCCAAGGATTAGTGCCAAGTTTATTGCTCCTTTTGTTACTATATCAACAAGTAAGGATTTCACTCTTTTTCTGCTGTATTCACATTTGAATAATGTATAGCTTAAGATTGTTGGAACCATCCCTTGCATCTCTGATATTATATATCAATAGATATGCTTATGCAATTATGATGTGATTAGGTACCTCATGCATTAAGCGAAACATTTGTGGTAGCTTAGTATAATGGCTGACAGAATGATAGTTTATTGACAGTGAGCTCTCTCTCTCAATTCTATCCCAAATTTGACCTGCCTTCTCTTGCATCTCTGTCTTCCTTTTAAACATCTCACTACTAACAACCTAACTATTTCACTTGCTTTTCCCAAACATATGCATAGAAAGTTTCTTTTCAATGATTATTTTACCCCTTGATCCTAACGTATGACCAAGTGGGCATGGGCATAAGCTTCAGTCGCTACCAAGTGTCAGTTTGTGTTATACATGCAAGGAAAAGAAAAAAAAAATCATTTCTCACTCTTTCTTTTTGGAAGCATTCCTGGATGCAAATTTTAATAACTTTAGTATGAGGAGGTAAGTATTATTCTTAAGAAAATTTTTAATATTTGAAGCAAAGTATTTCTATTAATACTGTAGAGTTGGAAACGGTAGTTAATAATAAGTGACCAGAGGAACCCAAGCACGTGAGACTTGAGACTTGAGTGTATTTGACCTCTTTTAGGTTTCGGAATTTTTATAATATTTCCTCTACGAGAAAGACAATATGTGCCATTTGAAATTATAGCTCTAGGAAATGGAATGCAAAAGGAAATTAGAAAACTTTGGTAGGAAAGGTAACGTTGATGTTAGGAAAATTGCAAGTGCATTTGCTGTGCATCTTTGATAAAAGGAATGTGTCATCAGTTATGGAGGTGAGAGGATACTGAGAGGACGGCAATTGAACCATAGCTCCAAGTTAGATGCAATGAGCATGGGGTACGAAATGAATAACGGAGTAGTCTGAAATAAGTGTTCCAAGTAAGAGTACACGGGATTTATTAATTGCCAAAGTAGGTTTGGACTGGGTGAGCTTTTTGGAATGTACATCCTCATTCCATCTTACGCATTCAAGAAAGAAGGCAAGTCAAGGCTGATAGTTAACTGTTGTGTGGTTTAAGGAAAGGAGAATTGAATAGTAAGAACTAACTAGAGGTTCTATAGCAACACCCTACTGAATTTATAGGCAACTGTTTCTACATTCTATTCCTTTTGTCTAAGTGTTAAACATTACGAATCCCTTATAAACAAATTCTTATAGGTTTGAACTTTTAATGTAAACTTTTCTTCAGAGTGGAGATTGACACAAAGCTTCCTTTACTTGGCGATAAATGGATTTGCTCCCTCAATGTGCCAATGGCTCCTGGAAAAACTCGTTCGAAACTTCTTCCAGTTTTCAATGCCCGGTCCTGCTTGGTGGCAAGTAAGCAGTCCGTGTTAATTAAATCTCTTTCTTATTTTTACGATATATTATCATCTCATTCCCTACCGTTATTGACCATTCAATATGCAACAATACGTTGTGATATTACAGTGTTTGACTTCCTAGTTTGCTTTTTCTAGTAGGTGGTTCCTCGATGGCACGGGCATTGGACATCGAATAAGGTATATGATGGAGACATGATTGTTCTTCAGGGGTCAGGAGAAGATATTTTTATCGATGAAAGGTTCGACAAAATGTAAATAAGAATGCACTAAAATAACGTTTACATCAACACAAGCGGATTGTTTGGTGCTAGCATTTCAAAATTGGCTGAGGCATCACGGAAAAGGCCAACCTAAATGGTTTAAGGCTTGCAGCCAACAGCCTCTGCCATCAACAGTTCTATCTAAACGTCAGATATTGAAAACTACCATCGTCTGGATTGTTTTTATAAAACTAAATGCTAAAGGCACGAACACTTTATTTTGA

mRNA sequence

ATGCCTGAGTTCTCATCAGTTATGATTCGGTGGGATCTATTTTATGGTAATGATACACTAATGGAGAATGTATCAGATCCTTCCCACATAGATCTTGCTCATCACCAAGAGTGGAGATTGACACAAAGCTTCCTTTACTTGGCGATAAATGGATTTGCTCCCTCAATGTGCCAATGGCTCCTGGAAAAACTCGTTCGAAACTTCTTCCAGTTTTCAATGCCCGGTCCTGCTTGGTGGCAAGTGGTTCCTCGATGGCACGGGCATTGGACATCGAATAAGGTATATGATGGAGACATGATTGTTCTTCAGGGGTCAGGAGAAGATATTTTTATCGATGAAAGGCATCACGGAAAAGGCCAACCTAAATGGTTTAAGGCTTGCAGCCAACAGCCTCTGCCATCAACAGTTCTATCTAAACGTCAGATATTGAAAACTACCATCGTCTGGATTGTTTTTATAAAACTAAATGCTAAAGGCACGAACACTTTATTTTGA

Coding sequence (CDS)

ATGCCTGAGTTCTCATCAGTTATGATTCGGTGGGATCTATTTTATGGTAATGATACACTAATGGAGAATGTATCAGATCCTTCCCACATAGATCTTGCTCATCACCAAGAGTGGAGATTGACACAAAGCTTCCTTTACTTGGCGATAAATGGATTTGCTCCCTCAATGTGCCAATGGCTCCTGGAAAAACTCGTTCGAAACTTCTTCCAGTTTTCAATGCCCGGTCCTGCTTGGTGGCAAGTGGTTCCTCGATGGCACGGGCATTGGACATCGAATAAGGTATATGATGGAGACATGATTGTTCTTCAGGGGTCAGGAGAAGATATTTTTATCGATGAAAGGCATCACGGAAAAGGCCAACCTAAATGGTTTAAGGCTTGCAGCCAACAGCCTCTGCCATCAACAGTTCTATCTAAACGTCAGATATTGAAAACTACCATCGTCTGGATTGTTTTTATAAAACTAAATGCTAAAGGCACGAACACTTTATTTTGA

Homology

[Close]

BLAST of CSPI01G13920 vs. Swiss-Prot
Match: PAO_ARATH (Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana GN=PAO PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 7.0e-17
Identity = 37/46 (80.43%), Postives = 41/46 (89.13%), Query Frame = 1


Query: 66  RNFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFI 112
           RNFFQFS+PGPAWWQVVPRW+ HWTSN VYDGDMIVLQG  E +F+
Sbjct: 344 RNFFQFSVPGPAWWQVVPRWYEHWTSNLVYDGDMIVLQGQ-EKVFL 388

[Close]

BLAST of CSPI01G13920 vs. TrEMBL
Match: A0A0A0LST3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132140 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.4e-67
Identity = 134/173 (77.46%), Postives = 138/173 (79.77%), Query Frame = 1


Query: 1   MPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQEWRLTQSFLYLAINGFAPSMCQWL 60
           MPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQEWRLTQSFLYLAINGFAPSMCQW+
Sbjct: 1   MPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQEWRLTQSFLYLAINGFAPSMCQWV 60

Query: 61  LEKLV-----RNFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFID--- 120
           LEKLV     RNFFQFSMPGPAWWQVVPRWH HWTSNKVYDGDMIVLQGSGEDIFID   
Sbjct: 61  LEKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFIDGST 120

Query: 121 ERHHGKGQPKWFKA-CSQQPLPSTVLSKRQILKTTIVWIVFIKLNAKGTNTLF 165
           E+ +  G      + C QQ  P            TIVWIV IKLNAKGTNTLF
Sbjct: 121 EKANLNGLGLAANSLCHQQFYP------------TIVWIVSIKLNAKGTNTLF 161

[Close]

BLAST of CSPI01G13920 vs. TrEMBL
Match: A0A0A0LSG3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132160 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.4e-27
Identity = 66/109 (60.55%), Postives = 69/109 (63.30%), Query Frame = 1


Query: 66  RNFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE------------ 125
           RNFFQFSMPGPAWWQVVPRWH HWTSNKVYDGDMIVLQG  E IF+              
Sbjct: 363 RNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGQ-EKIFLSMEGSTDVNKEYTK 422

Query: 126 -------------------RHHGKGQPKWFKACSQQPLPSTVLSKRQIL 144
                              R HGKGQP+WF A SQQPLPSTVLSKRQ+L
Sbjct: 423 ITFTPTQADRLVLAFRNWLRRHGKGQPEWFGASSQQPLPSTVLSKRQML 470

[Close]

BLAST of CSPI01G13920 vs. TrEMBL
Match: Q0H950_SOYBN (Lethal leaf spot 1-like protein OS=Glycine max GN=GLYMA_12G082100 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 2.9e-25
Identity = 62/110 (56.36%), Postives = 67/110 (60.91%), Query Frame = 1


Query: 66  RNFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE------------ 125
           RNFFQFS+PGPAWWQVVPRW+ HWTSNKVYDGDMIVLQG  E IF+ E            
Sbjct: 373 RNFFQFSVPGPAWWQVVPRWYEHWTSNKVYDGDMIVLQGQ-EKIFLSETKEGGDINKQYT 432

Query: 126 --------------------RHHGKGQPKWFKACSQQPLPSTVLSKRQIL 144
                               R HG GQP+WF   S QPLPSTVLSKRQ+L
Sbjct: 433 NITFTPTQADRFVLAFRNWLRRHGNGQPEWFGNSSDQPLPSTVLSKRQML 481

[Close]

BLAST of CSPI01G13920 vs. TrEMBL
Match: I1LKY8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G192300 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 2.9e-25
Identity = 62/110 (56.36%), Postives = 67/110 (60.91%), Query Frame = 1


Query: 66  RNFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE------------ 125
           RNFFQFS+PGPAWWQVVPRW+ HWTSNKVYDGDMIVLQG  E IF+ E            
Sbjct: 355 RNFFQFSVPGPAWWQVVPRWYEHWTSNKVYDGDMIVLQGQ-EKIFLSETKEGGDINKQYT 414

Query: 126 --------------------RHHGKGQPKWFKACSQQPLPSTVLSKRQIL 144
                               R HG GQP+WF   S QPLPSTVLSKRQ+L
Sbjct: 415 NITFTPTQADRFVLAFRNWLRRHGNGQPEWFGNSSDQPLPSTVLSKRQML 463

[Close]

BLAST of CSPI01G13920 vs. TrEMBL
Match: A0A0B2QLK2_GLYSO (Pheophorbide a oxygenase, chloroplastic OS=Glycine soja GN=glysoja_006563 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 2.9e-25
Identity = 62/110 (56.36%), Postives = 67/110 (60.91%), Query Frame = 1


Query: 66  RNFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE------------ 125
           RNFFQFS+PGPAWWQVVPRW+ HWTSNKVYDGDMIVLQG  E IF+ E            
Sbjct: 355 RNFFQFSVPGPAWWQVVPRWYEHWTSNKVYDGDMIVLQGQ-EKIFLSETKEGGDINKQYT 414

Query: 126 --------------------RHHGKGQPKWFKACSQQPLPSTVLSKRQIL 144
                               R HG GQP+WF   S QPLPSTVLSKRQ+L
Sbjct: 415 NITFTPTQADRFVLAFRNWLRRHGNGQPEWFGNSSDQPLPSTVLSKRQML 463

[Close]

BLAST of CSPI01G13920 vs. TAIR10
Match: AT3G44880.1 (AT3G44880.1 Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain)

HSP 1 Score: 88.6 bits (218), Expect = 4.0e-18
Identity = 37/46 (80.43%), Postives = 41/46 (89.13%), Query Frame = 1


Query: 66  RNFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFI 112
           RNFFQFS+PGPAWWQVVPRW+ HWTSN VYDGDMIVLQG  E +F+
Sbjct: 344 RNFFQFSVPGPAWWQVVPRWYEHWTSNLVYDGDMIVLQGQ-EKVFL 388

[Close]

BLAST of CSPI01G13920 vs. NCBI nr
Match: gi|700209757|gb|KGN64853.1| (hypothetical protein Csa_1G132140 [Cucumis sativus])

HSP 1 Score: 263.8 bits (673), Expect = 1.9e-67
Identity = 134/173 (77.46%), Postives = 138/173 (79.77%), Query Frame = 1


Query: 1   MPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQEWRLTQSFLYLAINGFAPSMCQWL 60
           MPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQEWRLTQSFLYLAINGFAPSMCQW+
Sbjct: 1   MPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQEWRLTQSFLYLAINGFAPSMCQWV 60

Query: 61  LEKLV-----RNFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFID--- 120
           LEKLV     RNFFQFSMPGPAWWQVVPRWH HWTSNKVYDGDMIVLQGSGEDIFID   
Sbjct: 61  LEKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFIDGST 120

Query: 121 ERHHGKGQPKWFKA-CSQQPLPSTVLSKRQILKTTIVWIVFIKLNAKGTNTLF 165
           E+ +  G      + C QQ  P            TIVWIV IKLNAKGTNTLF
Sbjct: 121 EKANLNGLGLAANSLCHQQFYP------------TIVWIVSIKLNAKGTNTLF 161

[Close]

BLAST of CSPI01G13920 vs. NCBI nr
Match: gi|659071896|ref|XP_008462467.1| (PREDICTED: pheophorbide a oxygenase, chloroplastic [Cucumis melo])

HSP 1 Score: 132.5 bits (332), Expect = 6.8e-28
Identity = 66/109 (60.55%), Postives = 70/109 (64.22%), Query Frame = 1


Query: 66  RNFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE------------ 125
           RNFFQFSMPGPAWWQVVPRWH HWTSNKVYDGDMIVLQG  E IF+              
Sbjct: 356 RNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGQ-EKIFLSMEGSTDVNKEYTK 415

Query: 126 -------------------RHHGKGQPKWFKACSQQPLPSTVLSKRQIL 144
                              R HGKGQP+WF+A SQQPLPSTVLSKRQ+L
Sbjct: 416 ITFTPTQADRLVLAFRNWLRRHGKGQPEWFRASSQQPLPSTVLSKRQML 463

[Close]

BLAST of CSPI01G13920 vs. NCBI nr
Match: gi|778659272|ref|XP_011654100.1| (PREDICTED: LOW QUALITY PROTEIN: pheophorbide a oxygenase, chloroplastic [Cucumis sativus])

HSP 1 Score: 131.0 bits (328), Expect = 2.0e-27
Identity = 66/109 (60.55%), Postives = 69/109 (63.30%), Query Frame = 1


Query: 66  RNFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE------------ 125
           RNFFQFSMPGPAWWQVVPRWH HWTSNKVYDGDMIVLQG  E IF+              
Sbjct: 357 RNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGQ-EKIFLSMEGSTDVNKEYTK 416

Query: 126 -------------------RHHGKGQPKWFKACSQQPLPSTVLSKRQIL 144
                              R HGKGQP+WF A SQQPLPSTVLSKRQ+L
Sbjct: 417 ITFTPTQADRLVLAFRNWLRRHGKGQPEWFGASSQQPLPSTVLSKRQML 464

[Close]

BLAST of CSPI01G13920 vs. NCBI nr
Match: gi|700209759|gb|KGN64855.1| (hypothetical protein Csa_1G132160 [Cucumis sativus])

HSP 1 Score: 131.0 bits (328), Expect = 2.0e-27
Identity = 66/109 (60.55%), Postives = 69/109 (63.30%), Query Frame = 1


Query: 66  RNFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE------------ 125
           RNFFQFSMPGPAWWQVVPRWH HWTSNKVYDGDMIVLQG  E IF+              
Sbjct: 363 RNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGQ-EKIFLSMEGSTDVNKEYTK 422

Query: 126 -------------------RHHGKGQPKWFKACSQQPLPSTVLSKRQIL 144
                              R HGKGQP+WF A SQQPLPSTVLSKRQ+L
Sbjct: 423 ITFTPTQADRLVLAFRNWLRRHGKGQPEWFGASSQQPLPSTVLSKRQML 470

[Close]

BLAST of CSPI01G13920 vs. NCBI nr
Match: gi|1009114333|ref|XP_015873629.1| (PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Ziziphus jujuba])

HSP 1 Score: 125.2 bits (313), Expect = 1.1e-25
Identity = 62/111 (55.86%), Postives = 67/111 (60.36%), Query Frame = 1


Query: 66  RNFFQFSMPGPAWWQVVPRWHGHWTSNKVYDGDMIVLQGSGEDIFIDE------------ 125
           RNFFQF+MPGPAWWQ+VPRWH HWTSNKVYDGDMIVLQG  E IF+ E            
Sbjct: 371 RNFFQFTMPGPAWWQIVPRWHEHWTSNKVYDGDMIVLQGQ-EKIFLSESMEGSTDVNKEY 430

Query: 126 ---------------------RHHGKGQPKWFKACSQQPLPSTVLSKRQIL 144
                                R HG  QP+WF   SQQPLPSTVLSKRQ+L
Sbjct: 431 TKITFTPTQADRLVLAFRNWLRRHGNSQPEWFGKSSQQPLPSTVLSKRQML 480

The following BLAST results are available for this feature:

BLAST of CSPI01G13920 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PAO_ARATH	7.0e-17	80.43	Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana GN=PAO PE=1 SV=1	[more]

BLAST of CSPI01G13920 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LST3_CUCSA	1.4e-67	77.46	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132140 PE=4 SV=1	[more]
A0A0A0LSG3_CUCSA	1.4e-27	60.55	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132160 PE=4 SV=1	[more]
Q0H950_SOYBN	2.9e-25	56.36	Lethal leaf spot 1-like protein OS=Glycine max GN=GLYMA_12G082100 PE=2 SV=1	[more]
I1LKY8_SOYBN	2.9e-25	56.36	Uncharacterized protein OS=Glycine max GN=GLYMA_11G192300 PE=4 SV=1	[more]
A0A0B2QLK2_GLYSO	2.9e-25	56.36	Pheophorbide a oxygenase, chloroplastic OS=Glycine soja GN=glysoja_006563 PE=4 S...	[more]

BLAST of CSPI01G13920 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G44880.1	4.0e-18	80.43	Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain	[more]

BLAST of CSPI01G13920 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700209757\|gb\|KGN64853.1\|	1.9e-67	77.46	hypothetical protein Csa_1G132140 [Cucumis sativus]	[more]
gi\|659071896\|ref\|XP_008462467.1\|	6.8e-28	60.55	PREDICTED: pheophorbide a oxygenase, chloroplastic [Cucumis melo]	[more]
gi\|778659272\|ref\|XP_011654100.1\|	2.0e-27	60.55	PREDICTED: LOW QUALITY PROTEIN: pheophorbide a oxygenase, chloroplastic [Cucumis...	[more]
gi\|700209759\|gb\|KGN64855.1\|	2.0e-27	60.55	hypothetical protein Csa_1G132160 [Cucumis sativus]	[more]
gi\|1009114333\|ref\|XP_015873629.1\|	1.1e-25	55.86	PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013626	PaO

Vocabulary: **Molecular Function**
Term	Definition
GO:0010277	chlorophyllide a oxygenase [overall] activity

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0010154	fruit development
biological_process	GO:0009908	flower development
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0009965	leaf morphogenesis
biological_process	GO:0048481	plant ovule development
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0009816	defense response to bacterium, incompatible interaction
biological_process	GO:0015996	chlorophyll catabolic process
biological_process	GO:0030154	cell differentiation
biological_process	GO:0008219	cell death
biological_process	GO:0048731	system development
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0010277	chlorophyllide a oxygenase [overall] activity
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0032441	pheophorbide a oxygenase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G13920.1	CSPI01G13920.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013626	Pheophorbide a oxygenase	PFAM	PF08417	PaO	coord: 63..105 score: 2.
None	No IPR available	PANTHER	PTHR21266	IRON-SULFUR DOMAIN CONTAINING PROTEIN	coord: 2..143 score: 1.9
None	No IPR available	PANTHER	PTHR21266:SF24	PHEOPHORBIDE A OXYGENASE, CHLOROPLASTIC	coord: 2..143 score: 1.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI01G13920	Cla001857	Watermelon (97103) v1	cpiwmB057
CSPI01G13920	Csa1G132140	Cucumber (Chinese Long) v2	cpicuB000
CSPI01G13920	MELO3C004867	Melon (DHL92) v3.5.1	cpimeB011
CSPI01G13920	ClCG01G013870	Watermelon (Charleston Gray)	cpiwcgB017
CSPI01G13920	Lsi03G000580	Bottle gourd (USVL1VR-Ls)	cpilsiB046
CSPI01G13920	MELO3C004867.2	Melon (DHL92) v3.6.1	cpimedB011
CSPI01G13920	CsaV3_1G014100	Cucumber (Chinese Long) v3	cpicucB001
CSPI01G13920	Cla97C01G012850	Watermelon (97103) v2	cpiwmbB002
CSPI01G13920	Bhi08G000125	Wax gourd	cpiwgoB049
CSPI01G13920	CmaCh13G002620	Cucurbita maxima (Rimu)	cmacpiB205
CSPI01G13920	CmoCh13G002690	Cucurbita moschata (Rifu)	cmocpiB192
CSPI01G13920	Cp4.1LG20g07340	Cucurbita pepo (Zucchini)	cpecpiB518
CSPI01G13920	CsGy1G013940	Cucumber (Gy14) v2	cgybcpiB001
CSPI01G13920	Carg23702	Silver-seed gourd	carcpiB0192

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI01G13920	Cucumber (Gy14) v1	cgycpiB318
CSPI01G13920	Cucurbita maxima (Rimu)	cmacpiB163
CSPI01G13920	Cucurbita moschata (Rifu)	cmocpiB148
CSPI01G13920	Cucurbita pepo (Zucchini)	cpecpiB805