CsaV3_1G011460 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATATAAATATAACTTGTCATAGATGATCATAAATTGTTAACATGACAAAGAATAAATAGAGATACAATAAGTGAGAAGAAGTCTCAAATCAGAGGTAAAGATTCGGCAGGAATTTAATTTGTAGAAAAAATCTTCAAAATAACTCACTAACGTGAAAAAAGAAAAAAACCCTTCGATATGGCCGATGAATATCCAGCCGGAAGCCTCTTCTCGCCGGCAGTTACCAATACCTCACCGTGTTCCGTCGGCAACTCCACCTTCTTGATTGATTCAACCATTACATCAGCTTCTAATTGGAACCAAAGTTTTCTGTAAGTTCATCATCACATTCAAAAATTCATTTTCTTATCATTATAAAAGTACATAACTATTTTTGTTTTGAATTGGTAGTGGATGGAATGATGAACAAAGAGTTGACACCACTGTGGTGGTGGATTCAATGACGGTCACAAAATTAAATTATGATGATCAAGAAATTACTTGTGGATCCGAGGAGCAACAAAATCCTAACATGTTTTTCAAGTCCACCGATGATGATCATCACTCTTTGTTTTTAATGGAACAACCTTATAATATTCAAACCGCTACAAATCTTTACCATGATGTTGTCACAACTACAACTAGCCAAGTGTTACCAATGGCTTTCCCTTTTGAGGCCATTTCCATTGGGTATACTCCAACGTTGTTGCCATGTTCATCACTGGATCAACCAACACAATTTCTTGCCAACAATCGAACCATTAATAATTGTTGTTCCTTAACAAATCCGGATGAGTTGTTGTCTTGTCATCCTATGTTTCAAACACAGTTGTTACATCCTCCTCCCCTCAATTTCTCCAATGGAATTATACCCAAATGCCCAACAAAGGTAAGAATTTGAATTAGTTGCTATATTTACTCTCATGATTAGCTCTATTAATTGTTGAACAATTTTTCATAGCTTATGTTCGTATAATAATAATTTCAAATTTTCAATTTCTTTTTTCGTTTTTAGAATGTATGTTTGGTTCTCTCCCTATCTCTACAATGGTTTTCACTCATTTTAAAGAAATACTTCAATTTTCCGTCTAACAATTTAAAAAAAAAGGTTTAATAAACTATTTATTTTATTCTCGTTTGGTTATCGTTTGATTTTTTAAAATTAAGCTTATAAATTAGGCTTTCATTTCAATTTGCTAACGTTTCCGTTCTTTGTTCTTGAATTTTTTAACAAAATATGAAAAGTTGAAATATCAGTGGGTACTTGAAAATGATGCACACCCATGGTAAGAATGTGAGTAAGAAAATGCTTAATATTTAAAAACAAAATGATACTGAACAAGACCTTAATTTTTCAAACTTTAAGTTGATTAAAAACACGGGTACAAATTGCATTTTTTTAGTTGGACTTTGGCTTATGCTGTAATGGATCTTTCTTGCTCCATGTGAGCATTCCTTTCGCTCACGTCTTGGACTTCTTCCTTGTTTGAAGTGACGATATTCTTTTTTTTTTGGGTTTGAGGTATATGAAACAAATACCTACATGGATGTGTTGTTAAATATATATATATATATATATATATATCGGATAATAAAATATGAAAATTCAAATATGGAAGCAGTGTTTATAACCTTAATTTTCATAAATAAAAAATAGTTATTAATTTGGTCGGTTGAACAAAATTTCAGTTGATGGGTTGTGATGAAGTTGTCGAAGATTGGAGTAGGGTTGAGAGGGAAAACGAAAGTAAAGAAATTGCAATAATCAAAAGGCCAAGAAGTGACAATTTGCCATCCCCATTACCCACTTTTAAGGTGCATTACATAATACATTCACATTCCATCAAACTTTTTGGCTACAGATTGAGCTTTCCTTTAATTCAAAATAACTTTTTTTCTTCTCCAAAGGTTCGAAAAGAGAAGCTTGGCGACAAGATCACAGCTCTTCAACAACTTGTTTCCCCTTTTGGAAAGGTGAATTTCTTAATCTTCCACTATATTTTTTATAGTTGACAATGTTATAGAGAAAGTAATAGTACTAAATAGTTCTGTTGTTGTGGCCGTACGAATTAGAAGTGATAACAAGAGATTGGGCAAGGATTCTATTGTTTAATAAGTCTGTGAACAAAACATGTTAAAAAGGTTTAAAACTAGAACTTTTGTTCATATGATTATTGCAGCTAAAAAAATAAGTACATGTTTGGTACACAAAGGTTTTGATTACTCTGTCATTGAACTTCAAAATTGGTATTCATATAGTATGCCGAGTAGTTAGTTGACTTAGTAAAGTGATGATTTCCATTTACTAAAAGAGTTGAGTTGTATTTTTTATATTTATTGAAGAAATTAAAAACCTATTTCAAACATGTATGAGTGCCCAATTAATTAGAAATTAAATTCAAATGTTAAGAACCAAAAAGTGTTAGTTTTAAGAACTTAAGAATAAATTCGGATCCTACTACTGTCTCTAATATAATCATTTTTGTTATTCATATCCACATTTTAGACTGATACTGCCTCAGTTCTACATGAAGCAATTGAGTACATCAAGTTTCTTCACAACCAAATTCGTGTAAGTACATCTTATTGTCTTCTTCATTCCTTTACAACCAAGACCTAACCCAAAAAAGAAAAAACATGTAAACAAGCACATAAATAATTAATTAATTTGGACATGCTTGTAATCTTTTTGGGGGTTCTATTAATTGTCAAATATGCATTCAGGTTTTGAGTACTCCATATATGGAAATTGGAGACCAAAATCAAGAGCCAAAGGTAAAAAAAAAAAAACCATATTTCTATATTGTATACTAAGAAAAAAATACGGATTTTTTGAACATGTTTATAAAATTTTTTGATGACAAGCAGATTATTAGTGAGGAAGAATTGAAGAACACCAACGAGAATATGAAAGAAGATCTAAGAAGTCGAGGACTTTGTCTAGTGACAATTCCAAGTACAGTTGCATTAGCAAATGGTAATATACTTAATTTCTGGTCTCCCACATTTGGAGGTACTTTTAGATAAAGTAATGAAGCTGACACTAATAATGTGAGTCAAAAACTGACATTATAGGAGTACGATATCGGTTAGGTGTTCAACATTAAAGAATGTGGTATTAAAAGTGTTCAATGTCAATCACATGTAATGTCGGTTTCAACCAATATTGGACATTTTTAATAGTACTGTCTTCGATATCGGTCCAACTTTGGACATTTTAATTTTCTGAACTATATTTAAGCTGACATGAAATAGTTGGCAGCCAAAGTAGGGATGTGAATGCTTTAGTTTAACTGCTGAGCAAGAAAATTGGTGTGGACATACTATGTTTAATTTGCAGATTGTAATCTCAGTTTGAAAGATAGGCTTTGTGTTGGGCCAGCTACAAACGTAACCAACTTCAGCTTAGGATGATTTTGTTATTGATGAGGGTTATAGGCTACTATCACTATCTAAACTATGTTGACAGTTGAATTCAATTCACTGAGCCATCATACTTCGGGTTTAATATCTATGATTTTCAATAATATTTCAAGATCCTATCTTTTTT ATGGCCGATGAATATCCAGCCGGAAGCCTCTTCTCGCCGGCAGTTACCAATACCTCACCGTGTTCCGTCGGCAACTCCACCTTCTTGATTGATTCAACCATTACATCAGCTTCTAATTGGAACCAAAGTTTTCTTGGATGGAATGATGAACAAAGAGTTGACACCACTGTGGTGGTGGATTCAATGACGGTCACAAAATTAAATTATGATGATCAAGAAATTACTTGTGGATCCGAGGAGCAACAAAATCCTAACATGTTTTTCAAGTCCACCGATGATGATCATCACTCTTTGTTTTTAATGGAACAACCTTATAATATTCAAACCGCTACAAATCTTTACCATGATGTTGTCACAACTACAACTAGCCAAGTGTTACCAATGGCTTTCCCTTTTGAGGCCATTTCCATTGGGTATACTCCAACGTTGTTGCCATGTTCATCACTGGATCAACCAACACAATTTCTTGCCAACAATCGAACCATTAATAATTGTTGTTCCTTAACAAATCCGGATGAGTTGTTGTCTTGTCATCCTATGTTTCAAACACAGTTGTTACATCCTCCTCCCCTCAATTTCTCCAATGGAATTATACCCAAATGCCCAACAAAGTTGATGGGTTGTGATGAAGTTGTCGAAGATTGGAGTAGGGTTGAGAGGGAAAACGAAAGTAAAGAAATTGCAATAATCAAAAGGCCAAGAAGTGACAATTTGCCATCCCCATTACCCACTTTTAAGGTTCGAAAAGAGAAGCTTGGCGACAAGATCACAGCTCTTCAACAACTTGTTTCCCCTTTTGGAAAGACTGATACTGCCTCAGTTCTACATGAAGCAATTGAGTACATCAAGTTTCTTCACAACCAAATTCGTGTTTTGAGTACTCCATATATGGAAATTGGAGACCAAAATCAAGAGCCAAAGATTATTAGTGAGGAAGAATTGAAGAACACCAACGAGAATATGAAAGAAGATCTAAGAAGTCGAGGACTTTGTCTAGTGACAATTCCAAGTACAGTTGCATTAGCAAATGGTAATATACTTAATTTCTGGTCTCCCACATTTGGAGGTACTTTTAGATAA ATGGCCGATGAATATCCAGCCGGAAGCCTCTTCTCGCCGGCAGTTACCAATACCTCACCGTGTTCCGTCGGCAACTCCACCTTCTTGATTGATTCAACCATTACATCAGCTTCTAATTGGAACCAAAGTTTTCTTGGATGGAATGATGAACAAAGAGTTGACACCACTGTGGTGGTGGATTCAATGACGGTCACAAAATTAAATTATGATGATCAAGAAATTACTTGTGGATCCGAGGAGCAACAAAATCCTAACATGTTTTTCAAGTCCACCGATGATGATCATCACTCTTTGTTTTTAATGGAACAACCTTATAATATTCAAACCGCTACAAATCTTTACCATGATGTTGTCACAACTACAACTAGCCAAGTGTTACCAATGGCTTTCCCTTTTGAGGCCATTTCCATTGGGTATACTCCAACGTTGTTGCCATGTTCATCACTGGATCAACCAACACAATTTCTTGCCAACAATCGAACCATTAATAATTGTTGTTCCTTAACAAATCCGGATGAGTTGTTGTCTTGTCATCCTATGTTTCAAACACAGTTGTTACATCCTCCTCCCCTCAATTTCTCCAATGGAATTATACCCAAATGCCCAACAAAGTTGATGGGTTGTGATGAAGTTGTCGAAGATTGGAGTAGGGTTGAGAGGGAAAACGAAAGTAAAGAAATTGCAATAATCAAAAGGCCAAGAAGTGACAATTTGCCATCCCCATTACCCACTTTTAAGGTTCGAAAAGAGAAGCTTGGCGACAAGATCACAGCTCTTCAACAACTTGTTTCCCCTTTTGGAAAGACTGATACTGCCTCAGTTCTACATGAAGCAATTGAGTACATCAAGTTTCTTCACAACCAAATTCGTGTTTTGAGTACTCCATATATGGAAATTGGAGACCAAAATCAAGAGCCAAAGATTATTAGTGAGGAAGAATTGAAGAACACCAACGAGAATATGAAAGAAGATCTAAGAAGTCGAGGACTTTGTCTAGTGACAATTCCAAGTACAGTTGCATTAGCAAATGGTAATATACTTAATTTCTGGTCTCCCACATTTGGAGGTACTTTTAGATAA MADEYPAGSLFSPAVTNTSPCSVGNSTFLIDSTITSASNWNQSFLGWNDEQRVDTTVVVDSMTVTKLNYDDQEITCGSEEQQNPNMFFKSTDDDHHSLFLMEQPYNIQTATNLYHDVVTTTTSQVLPMAFPFEAISIGYTPTLLPCSSLDQPTQFLANNRTINNCCSLTNPDELLSCHPMFQTQLLHPPPLNFSNGIIPKCPTKLMGCDEVVEDWSRVERENESKEIAIIKRPRSDNLPSPLPTFKVRKEKLGDKITALQQLVSPFGKTDTASVLHEAIEYIKFLHNQIRVLSTPYMEIGDQNQEPKIISEEELKNTNENMKEDLRSRGLCLVTIPSTVALANGNILNFWSPTFGGTFR
BLAST of CsaV3_1G011460 vs. NCBI nr
Match: XP_011652899.1 (PREDICTED: uncharacterized protein LOC105435148 isoform X1 [Cucumis sativus] >KGN64594.1 hypothetical protein Csa_1G070590 [Cucumis sativus]) HSP 1 Score: 715.7 bits (1846), Expect = 7.9e-203 Identity = 359/359 (100.00%), Postives = 359/359 (100.00%), Query Frame = 0
BLAST of CsaV3_1G011460 vs. NCBI nr
Match: XP_008441703.1 (PREDICTED: transcription factor bHLH112-like isoform X1 [Cucumis melo]) HSP 1 Score: 649.4 bits (1674), Expect = 7.0e-183 Identity = 325/359 (90.53%), Postives = 331/359 (92.20%), Query Frame = 0
BLAST of CsaV3_1G011460 vs. NCBI nr
Match: XP_011652903.1 (PREDICTED: uncharacterized protein LOC105435148 isoform X2 [Cucumis sativus]) HSP 1 Score: 610.5 bits (1573), Expect = 3.6e-171 Identity = 317/359 (88.30%), Postives = 317/359 (88.30%), Query Frame = 0
BLAST of CsaV3_1G011460 vs. NCBI nr
Match: XP_008441707.1 (PREDICTED: transcription factor bHLH133-like isoform X2 [Cucumis melo]) HSP 1 Score: 549.7 bits (1415), Expect = 7.5e-153 Identity = 285/359 (79.39%), Postives = 291/359 (81.06%), Query Frame = 0
BLAST of CsaV3_1G011460 vs. NCBI nr
Match: XP_023519613.1 (transcription factor bHLH112-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 361.7 bits (927), Expect = 2.9e-96 Identity = 220/370 (59.46%), Postives = 255/370 (68.92%), Query Frame = 0
BLAST of CsaV3_1G011460 vs. TAIR10
Match: AT1G61660.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 141.4 bits (355), Expect = 1.1e-33 Identity = 80/137 (58.39%), Postives = 92/137 (67.15%), Query Frame = 0
BLAST of CsaV3_1G011460 vs. TAIR10
Match: AT3G20640.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 141.0 bits (354), Expect = 1.5e-33 Identity = 88/185 (47.57%), Postives = 113/185 (61.08%), Query Frame = 0
BLAST of CsaV3_1G011460 vs. TAIR10
Match: AT4G21340.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 114.0 bits (284), Expect = 1.9e-25 Identity = 67/113 (59.29%), Postives = 83/113 (73.45%), Query Frame = 0
BLAST of CsaV3_1G011460 vs. TAIR10
Match: AT2G20100.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 112.8 bits (281), Expect = 4.3e-25 Identity = 69/159 (43.40%), Postives = 92/159 (57.86%), Query Frame = 0
BLAST of CsaV3_1G011460 vs. TAIR10
Match: AT4G29100.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 110.5 bits (275), Expect = 2.1e-24 Identity = 68/155 (43.87%), Postives = 91/155 (58.71%), Query Frame = 0
BLAST of CsaV3_1G011460 vs. Swiss-Prot
Match: sp|Q94JL3|BH112_ARATH (Transcription factor bHLH112 OS=Arabidopsis thaliana OX=3702 GN=BHLH112 PE=1 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 2.0e-32 Identity = 80/137 (58.39%), Postives = 92/137 (67.15%), Query Frame = 0
BLAST of CsaV3_1G011460 vs. Swiss-Prot
Match: sp|Q8GXT3|BH123_ARATH (Transcription factor bHLH123 OS=Arabidopsis thaliana OX=3702 GN=BHLH123 PE=1 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 2.6e-32 Identity = 88/185 (47.57%), Postives = 113/185 (61.08%), Query Frame = 0
BLAST of CsaV3_1G011460 vs. Swiss-Prot
Match: sp|Q8VZ22|BH103_ARATH (Transcription factor bHLH103 OS=Arabidopsis thaliana OX=3702 GN=BHLH103 PE=1 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 3.5e-24 Identity = 67/113 (59.29%), Postives = 83/113 (73.45%), Query Frame = 0
BLAST of CsaV3_1G011460 vs. Swiss-Prot
Match: sp|Q7XHI5|BH133_ARATH (Transcription factor bHLH133 OS=Arabidopsis thaliana OX=3702 GN=BHLH133 PE=1 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 7.7e-24 Identity = 69/159 (43.40%), Postives = 92/159 (57.86%), Query Frame = 0
BLAST of CsaV3_1G011460 vs. Swiss-Prot
Match: sp|Q8S3D1|BH068_ARATH (Transcription factor bHLH68 OS=Arabidopsis thaliana OX=3702 GN=BHLH68 PE=1 SV=2) HSP 1 Score: 110.5 bits (275), Expect = 3.8e-23 Identity = 68/155 (43.87%), Postives = 91/155 (58.71%), Query Frame = 0
BLAST of CsaV3_1G011460 vs. TrEMBL
Match: tr|A0A0A0LUD2|A0A0A0LUD2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G070590 PE=4 SV=1) HSP 1 Score: 715.7 bits (1846), Expect = 5.3e-203 Identity = 359/359 (100.00%), Postives = 359/359 (100.00%), Query Frame = 0
BLAST of CsaV3_1G011460 vs. TrEMBL
Match: tr|A0A1S3B4S8|A0A1S3B4S8_CUCME (transcription factor bHLH112-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485775 PE=4 SV=1) HSP 1 Score: 649.4 bits (1674), Expect = 4.6e-183 Identity = 325/359 (90.53%), Postives = 331/359 (92.20%), Query Frame = 0
BLAST of CsaV3_1G011460 vs. TrEMBL
Match: tr|A0A1S3B415|A0A1S3B415_CUCME (transcription factor bHLH133-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485775 PE=4 SV=1) HSP 1 Score: 549.7 bits (1415), Expect = 5.0e-153 Identity = 285/359 (79.39%), Postives = 291/359 (81.06%), Query Frame = 0
BLAST of CsaV3_1G011460 vs. TrEMBL
Match: tr|A0A067JLF7|A0A067JLF7_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_21311 PE=4 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 3.7e-47 Identity = 152/394 (38.58%), Postives = 198/394 (50.25%), Query Frame = 0
BLAST of CsaV3_1G011460 vs. TrEMBL
Match: tr|A0A2P4JT77|A0A2P4JT77_QUESU (Transcription factor OS=Quercus suber OX=58331 GN=CFP56_37008 PE=4 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 2.9e-44 Identity = 147/397 (37.03%), Postives = 201/397 (50.63%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |