Carg13727 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg13727
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Transcription factor, putative
Location	Cucurbita_argyrosperma_scaffold_058 : 246130 .. 248247 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGGGGTTTCCAATATGGCAGAGGATTTTCAGGCTGCTATTTGCGGCGATAATTGGTGGAGCTCTTCCCGGACCATGTTGGTGGCTGTCGGTGGATTGTCGCCGTGTTCTATGGGGATCGGGGACTTAGCTTGGCCGCCGGCCGATGATTTTTCCGACATCAAACCCAAATCCACCGCTAATTATTCCGACAATCAGAACTCCATGTTTTTTCAAGATTATTCCACCTCCGATCATTGGAATCAACCCCATGATTTGCTGTAAGTGACCCACAAACAAAAACAAAAAAAGATTCGATTTTTATTAATCAATTTTGCTTAATTTTTGTTGTTGTGGAAACAGGTTGAAGCGAGGAGATTATTTGTTGGAACAAAATGGGGTGAATTGTATGAACTGTTGTTCTTCCACTAGCCAGGGTTTGTTTCCTCTTGACTCAGCTTTATATGGATACCCTTCCCCTTCAACTAAGCTGCTCCATGGCTTATACAATAATGATGATGATGATGATGATCATCATCATCCTGACCCTCACTCCCTTTTCAACGCCGCCACCACTTCAATTAACACTAATTATCCTTCTAATTACCTTATTAAACCCTCTCTCCCAATCCCGCCGCCCTCTCAGCCTGTTTCACCGGCCTTGCACTTCACAAACAACACGCCCTTTTGGAATGCCTCGCACGCACCTCCTTCCATTGAAATTCCACAGAATAGTAGGCTTGGTTTCAAGGTATGATTTTGATTGGTATGATTGGGTTTTGGGTGTCACTTGATTGATTTTGATTGTTTTTCTTTAGGCTATGAATAATGGTAATTGTGAAGATGGTGAAGAAGCAAGGAAAGGGGATAAAAATGAGCCGCCGGTGTCGAAAAGGCCTCGAATTGAAACTCCTTCGCCATTGCCAACATTTAAGGTGAAGGATCCCAAAAAAAAAAAAAAAAAAGTTTGAAGAATCTTGGGTTATAAAAAGGACAAAAACTAATGGGTTTGCTATCAGGTGCGGAAAGAGAAGCTAGGGGACCGTGTCACTGCCCTTCAACAACTGGTTTCACCCTTTGGAAAGGTGAGTTTTTGGATTTCATCCCAAAAAAAATATATATCCGAGGTGAACGAAACATTCTTTATGAGTTATAAGTATAAGGGTGTGGAAATCTTTTCTTTGTAGTTTTAAAATTGTGAGGTTGACAACTATATATAACGAGTCAAAACGAACAATATTTGTTAGTGGTGGGTTGGTTATGTGCCAACGAGAACCCTAGGCCTTAAAGGGTGGATTGTGAGATCCCACTTCGGTTGAAAAGGGAAACAAAACATTCCTTATAACGGTGTGTAAACCTCTCCCTAGTAGTTTTAAAATCATGAGGCTGACGATGATATATAATGAGACAAACCGAACAGTATTTACTAGCAGTGGGTTTGAGCGGTAATAAATGGTATCAGAGCTAGACACTGAACGATGTGCTAGTAAGAACGTTGGGCCCCAAGAGAGGTGGATTATGAGATCCCACATCAGTTGGAGAAGAAAATGAAACATTCCTTATAAGAGTGTGGAAGTCTATACTTAGTAGACACGTTTTAAAATCGTGAGGCTGACGATAATTCTCGTCTCTTTTTCCTCCAGACTGATACAGCCTCAGTTCTTCATGAAGCCATTGAGTACATCAAGTTCCTCCACGATCAAGTCAGTGTACGTTCCATTATTTACATAAATTTCATCTTTAATTTCCTTTTAAAACCCAAATTAGTTCATTCATTACTTGAAATTTTCAGCTGTTAAGCACTCCATATATGAAGAACAACAACGGAATAACACCCCTTCAACAACAACAGGTAAAAAAAAATATGAACTTTCTTCAAATTACCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTTATAAACTTTACAGTTGCTTGAATTCCAGGTATCAGAAAAAGCAGACCCAAAACAAGATCTGAAAAGCCGAGGCCTTTGTTTGGTGCCGATCTCAAGCACATTCCCAGTGACAAATGCAACAACGACGGATTTCTGGTCACCGACGTTCGGCGGAACATTCCGGTGAAGATATATATATATATATATGAATATAAGATTGAATTTGGTGTAATAATGAAGGG

mRNA sequence

TTGGGGTTTCCAATATGGCAGAGGATTTTCAGGCTGCTATTTGCGGCGATAATTGGTGGAGCTCTTCCCGGACCATGTTGGTGGCTGTCGGTGGATTGTCGCCGTGTTCTATGGGGATCGGGGACTTAGCTTGGCCGCCGGCCGATGATTTTTCCGACATCAAACCCAAATCCACCGCTAATTATTCCGACAATCAGAACTCCATGTTTTTTCAAGATTATTCCACCTCCGATCATTGGAATCAACCCCATGATTTGCTGTTGAAGCGAGGAGATTATTTGTTGGAACAAAATGGGGTGAATTGTATGAACTGTTGTTCTTCCACTAGCCAGGGTTTGTTTCCTCTTGACTCAGCTTTATATGGATACCCTTCCCCTTCAACTAAGCTGCTCCATGGCTTATACAATAATGATGATGATGATGATGATCATCATCATCCTGACCCTCACTCCCTTTTCAACGCCGCCACCACTTCAATTAACACTAATTATCCTTCTAATTACCTTATTAAACCCTCTCTCCCAATCCCGCCGCCCTCTCAGCCTGTTTCACCGGCCTTGCACTTCACAAACAACACGCCCTTTTGGAATGCCTCGCACGCACCTCCTTCCATTGAAATTCCACAGAATAGTAGGCTTGGTTTCAAGGCTATGAATAATGGTAATTGTGAAGATGGTGAAGAAGCAAGGAAAGGGGATAAAAATGAGCCGCCGGTGTCGAAAAGGCCTCGAATTGAAACTCCTTCGCCATTGCCAACATTTAAGGTGCGGAAAGAGAAGCTAGGGGACCGTGTCACTGCCCTTCAACAACTGGTTTCACCCTTTGGAAAGACTGATACAGCCTCAGTTCTTCATGAAGCCATTGAGTACATCAAGTTCCTCCACGATCAAGTCAGTCTGTTAAGCACTCCATATATGAAGAACAACAACGGAATAACACCCCTTCAACAACAACAGGTATCAGAAAAAGCAGACCCAAAACAAGATCTGAAAAGCCGAGGCCTTTGTTTGGTGCCGATCTCAAGCACATTCCCAGTGACAAATGCAACAACGACGGATTTCTGGTCACCGACGTTCGGCGGAACATTCCGGTGAAGATATATATATATATATATGAATATAAGATTGAATTTGGTGTAATAATGAAGGG

Coding sequence (CDS)

ATGGCAGAGGATTTTCAGGCTGCTATTTGCGGCGATAATTGGTGGAGCTCTTCCCGGACCATGTTGGTGGCTGTCGGTGGATTGTCGCCGTGTTCTATGGGGATCGGGGACTTAGCTTGGCCGCCGGCCGATGATTTTTCCGACATCAAACCCAAATCCACCGCTAATTATTCCGACAATCAGAACTCCATGTTTTTTCAAGATTATTCCACCTCCGATCATTGGAATCAACCCCATGATTTGCTGTTGAAGCGAGGAGATTATTTGTTGGAACAAAATGGGGTGAATTGTATGAACTGTTGTTCTTCCACTAGCCAGGGTTTGTTTCCTCTTGACTCAGCTTTATATGGATACCCTTCCCCTTCAACTAAGCTGCTCCATGGCTTATACAATAATGATGATGATGATGATGATCATCATCATCCTGACCCTCACTCCCTTTTCAACGCCGCCACCACTTCAATTAACACTAATTATCCTTCTAATTACCTTATTAAACCCTCTCTCCCAATCCCGCCGCCCTCTCAGCCTGTTTCACCGGCCTTGCACTTCACAAACAACACGCCCTTTTGGAATGCCTCGCACGCACCTCCTTCCATTGAAATTCCACAGAATAGTAGGCTTGGTTTCAAGGCTATGAATAATGGTAATTGTGAAGATGGTGAAGAAGCAAGGAAAGGGGATAAAAATGAGCCGCCGGTGTCGAAAAGGCCTCGAATTGAAACTCCTTCGCCATTGCCAACATTTAAGGTGCGGAAAGAGAAGCTAGGGGACCGTGTCACTGCCCTTCAACAACTGGTTTCACCCTTTGGAAAGACTGATACAGCCTCAGTTCTTCATGAAGCCATTGAGTACATCAAGTTCCTCCACGATCAAGTCAGTCTGTTAAGCACTCCATATATGAAGAACAACAACGGAATAACACCCCTTCAACAACAACAGGTATCAGAAAAAGCAGACCCAAAACAAGATCTGAAAAGCCGAGGCCTTTGTTTGGTGCCGATCTCAAGCACATTCCCAGTGACAAATGCAACAACGACGGATTTCTGGTCACCGACGTTCGGCGGAACATTCCGGTGA

Protein sequence

MAEDFQAAICGDNWWSSSRTMLVAVGGLSPCSMGIGDLAWPPADDFSDIKPKSTANYSDNQNSMFFQDYSTSDHWNQPHDLLLKRGDYLLEQNGVNCMNCCSSTSQGLFPLDSALYGYPSPSTKLLHGLYNNDDDDDDHHHPDPHSLFNAATTSINTNYPSNYLIKPSLPIPPPSQPVSPALHFTNNTPFWNASHAPPSIEIPQNSRLGFKAMNNGNCEDGEEARKGDKNEPPVSKRPRIETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSLLSTPYMKNNNGITPLQQQQVSEKADPKQDLKSRGLCLVPISSTFPVTNATTTDFWSPTFGGTFR

Homology

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BLAST of Carg13727 vs. NCBI nr
Match: XP_022950200.1 (transcription factor bHLH112-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 699.1 bits (1803), Expect = 7.7e-198
Identity = 352/359 (98.05%), Postives = 353/359 (98.33%), Query Frame = 0


Query: 1   MAEDFQAAICGDNWWSSSRTMLVAVGGLSPCSMGIGDLAWPPADDFSDIKPKSTANYSDN 60
           MAEDFQAAICGDNWWSSSRTMLVAVGGLSPCSMGIGDLAWPPADDFSDIKPKSTANYSDN
Sbjct: 1   MAEDFQAAICGDNWWSSSRTMLVAVGGLSPCSMGIGDLAWPPADDFSDIKPKSTANYSDN 60

Query: 61  QNSMFFQDYSTSDHWNQPHDLLLKRGDYLLEQNGVNCMNCCSSTSQGLFPLDSALYGYPS 120
           QNSMFFQDYSTSDHWNQPHDLLLKRGDYLLEQNGVNCMNCCSSTSQGLFPLDSALYGYPS
Sbjct: 61  QNSMFFQDYSTSDHWNQPHDLLLKRGDYLLEQNGVNCMNCCSSTSQGLFPLDSALYGYPS 120

Query: 121 PSTKLLHGLYXXXXXXXXXXXXXPHSLFNAATTSINTNYPSNYLIKPSLPIPPPSQPVSP 180
           PSTKLLHGLY   XXXXXXXXXXPHSLFNAATT INTNYPSNYLIKPSLPIPPPSQPVSP
Sbjct: 121 PSTKLLHGLY-NNXXXXXXXXXXPHSLFNAATTPINTNYPSNYLIKPSLPIPPPSQPVSP 180

Query: 181 ALHFTNNTPFWNASHAPPSIEIPQNSRLGFKAMNNGNCEDGEEARKGDKNEPPVSKRPRI 240
           ALHFTNNTPFWNASHAPPSIEIPQNSRLGFKAMNNGNCEDGEEARKGDKNEPPV KRPRI
Sbjct: 181 ALHFTNNTPFWNASHAPPSIEIPQNSRLGFKAMNNGNCEDGEEARKGDKNEPPVLKRPRI 240

Query: 241 ETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSLLSTPY 300
           ETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSLLSTPY
Sbjct: 241 ETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSLLSTPY 300

Query: 301 MKNNNGITPLQQQQVSEKADPKQDLKSRGLCLVPISSTFPVTNATTTDFWSPTFGGTFR 360
           MKNNNGITP+QQQQVSEKADPKQDLKSRGLCLVPISSTFPVTNATT DFWSPTFGGTFR
Sbjct: 301 MKNNNGITPVQQQQVSEKADPKQDLKSRGLCLVPISSTFPVTNATTADFWSPTFGGTFR 358

[Close]

BLAST of Carg13727 vs. NCBI nr
Match: XP_022950201.1 (transcription factor bHLH112-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 691.0 bits (1782), Expect = 2.1e-195
Identity = 350/359 (97.49%), Postives = 351/359 (97.77%), Query Frame = 0


Query: 1   MAEDFQAAICGDNWWSSSRTMLVAVGGLSPCSMGIGDLAWPPADDFSDIKPKSTANYSDN 60
           MAEDFQAAICGDNWWSSSRTMLVAVGGLSPCSMGIGDLAWPPADDFSDIKPKSTANYSDN
Sbjct: 1   MAEDFQAAICGDNWWSSSRTMLVAVGGLSPCSMGIGDLAWPPADDFSDIKPKSTANYSDN 60

Query: 61  QNSMFFQDYSTSDHWNQPHDLLLKRGDYLLEQNGVNCMNCCSSTSQGLFPLDSALYGYPS 120
           QNSMFFQDYSTSDHWNQPHDLLLKRGDYLLEQNGVNCMNCCSSTSQGLFPLDSALYGYPS
Sbjct: 61  QNSMFFQDYSTSDHWNQPHDLLLKRGDYLLEQNGVNCMNCCSSTSQGLFPLDSALYGYPS 120

Query: 121 PSTKLLHGLYXXXXXXXXXXXXXPHSLFNAATTSINTNYPSNYLIKPSLPIPPPSQPVSP 180
           PSTKLLHGLY   XXXXXXXXXXPHSLFNAATT INTNYPSNYLIKPSLPIPPPSQPVSP
Sbjct: 121 PSTKLLHGLY-NNXXXXXXXXXXPHSLFNAATTPINTNYPSNYLIKPSLPIPPPSQPVSP 180

Query: 181 ALHFTNNTPFWNASHAPPSIEIPQNSRLGFKAMNNGNCEDGEEARKGDKNEPPVSKRPRI 240
           ALHFTNNTPFWNASHAPPSIEIPQNSRLGFKAMNNGNCEDGEEARKGDKNEPPV KRPRI
Sbjct: 181 ALHFTNNTPFWNASHAPPSIEIPQNSRLGFKAMNNGNCEDGEEARKGDKNEPPVLKRPRI 240

Query: 241 ETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSLLSTPY 300
           ETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQ  LLSTPY
Sbjct: 241 ETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQ--LLSTPY 300

Query: 301 MKNNNGITPLQQQQVSEKADPKQDLKSRGLCLVPISSTFPVTNATTTDFWSPTFGGTFR 360
           MKNNNGITP+QQQQVSEKADPKQDLKSRGLCLVPISSTFPVTNATT DFWSPTFGGTFR
Sbjct: 301 MKNNNGITPVQQQQVSEKADPKQDLKSRGLCLVPISSTFPVTNATTADFWSPTFGGTFR 356

[Close]

BLAST of Carg13727 vs. NCBI nr
Match: XP_023544490.1 (transcription factor bHLH112-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 690.6 bits (1781), Expect = 2.7e-195
Identity = 351/359 (97.77%), Postives = 352/359 (98.05%), Query Frame = 0


Query: 1   MAEDFQAAICGDNWWSSSRTMLVAVGGLSPCSMGIGDLAWPPADDFSDIKPKSTANYSDN 60
           MAEDFQAAICGDNWWSSSRTMLVAVGGLSPCSMGIGDLAWPPADDFSDIKPKSTANYSDN
Sbjct: 1   MAEDFQAAICGDNWWSSSRTMLVAVGGLSPCSMGIGDLAWPPADDFSDIKPKSTANYSDN 60

Query: 61  QNSMFFQDYSTSDHWNQPHDLLLKRGDYLLEQNGVNCMNCCSSTSQGLFPLDSALYGYPS 120
           QNSMFFQDYSTSDHWNQPHD LLKRGDYLLEQNGVNCMN CSSTSQGLFPLDS LYGYPS
Sbjct: 61  QNSMFFQDYSTSDHWNQPHDFLLKRGDYLLEQNGVNCMN-CSSTSQGLFPLDSGLYGYPS 120

Query: 121 PSTKLLHGLYXXXXXXXXXXXXXPHSLFNAATTSINTNYPSNYLIKPSLPIPPPSQPVSP 180
           PSTKLLHGLYXXXXXXXXXXXXXPHSLFNAATTSINTNYPSNYLIKPSLPIPPPSQPVSP
Sbjct: 121 PSTKLLHGLYXXXXXXXXXXXXXPHSLFNAATTSINTNYPSNYLIKPSLPIPPPSQPVSP 180

Query: 181 ALHFTNNTPFWNASHAPPSIEIPQNSRLGFKAMNNGNCEDGEEARKGDKNEPPVSKRPRI 240
           ALHFTNNTPFWNASHAPPSIEIPQN RLGFKAMNNGNCEDGEEARKGDKNEPPV KRPRI
Sbjct: 181 ALHFTNNTPFWNASHAPPSIEIPQNCRLGFKAMNNGNCEDGEEARKGDKNEPPVLKRPRI 240

Query: 241 ETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSLLSTPY 300
           ETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSLLSTPY
Sbjct: 241 ETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSLLSTPY 300

Query: 301 MKNNNGITPLQQQQVSEKADPKQDLKSRGLCLVPISSTFPVTNATTTDFWSPTFGGTFR 360
           MKNNNGITP+Q QQVSEKADPKQDLKSRGLCLVPISSTFPVTNATT DFWSPTFGGTFR
Sbjct: 301 MKNNNGITPIQHQQVSEKADPKQDLKSRGLCLVPISSTFPVTNATTADFWSPTFGGTFR 358

[Close]

BLAST of Carg13727 vs. NCBI nr
Match: XP_023544491.1 (transcription factor bHLH112-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 682.6 bits (1760), Expect = 7.4e-193
Identity = 349/359 (97.21%), Postives = 350/359 (97.49%), Query Frame = 0


Query: 1   MAEDFQAAICGDNWWSSSRTMLVAVGGLSPCSMGIGDLAWPPADDFSDIKPKSTANYSDN 60
           MAEDFQAAICGDNWWSSSRTMLVAVGGLSPCSMGIGDLAWPPADDFSDIKPKSTANYSDN
Sbjct: 1   MAEDFQAAICGDNWWSSSRTMLVAVGGLSPCSMGIGDLAWPPADDFSDIKPKSTANYSDN 60

Query: 61  QNSMFFQDYSTSDHWNQPHDLLLKRGDYLLEQNGVNCMNCCSSTSQGLFPLDSALYGYPS 120
           QNSMFFQDYSTSDHWNQPHD LLKRGDYLLEQNGVNCMN CSSTSQGLFPLDS LYGYPS
Sbjct: 61  QNSMFFQDYSTSDHWNQPHDFLLKRGDYLLEQNGVNCMN-CSSTSQGLFPLDSGLYGYPS 120

Query: 121 PSTKLLHGLYXXXXXXXXXXXXXPHSLFNAATTSINTNYPSNYLIKPSLPIPPPSQPVSP 180
           PSTKLLHGLYXXXXXXXXXXXXXPHSLFNAATTSINTNYPSNYLIKPSLPIPPPSQPVSP
Sbjct: 121 PSTKLLHGLYXXXXXXXXXXXXXPHSLFNAATTSINTNYPSNYLIKPSLPIPPPSQPVSP 180

Query: 181 ALHFTNNTPFWNASHAPPSIEIPQNSRLGFKAMNNGNCEDGEEARKGDKNEPPVSKRPRI 240
           ALHFTNNTPFWNASHAPPSIEIPQN RLGFKAMNNGNCEDGEEARKGDKNEPPV KRPRI
Sbjct: 181 ALHFTNNTPFWNASHAPPSIEIPQNCRLGFKAMNNGNCEDGEEARKGDKNEPPVLKRPRI 240

Query: 241 ETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSLLSTPY 300
           ETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQ  LLSTPY
Sbjct: 241 ETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQ--LLSTPY 300

Query: 301 MKNNNGITPLQQQQVSEKADPKQDLKSRGLCLVPISSTFPVTNATTTDFWSPTFGGTFR 360
           MKNNNGITP+Q QQVSEKADPKQDLKSRGLCLVPISSTFPVTNATT DFWSPTFGGTFR
Sbjct: 301 MKNNNGITPIQHQQVSEKADPKQDLKSRGLCLVPISSTFPVTNATTADFWSPTFGGTFR 356

[Close]

BLAST of Carg13727 vs. NCBI nr
Match: XP_022977366.1 (transcription factor bHLH112-like [Cucurbita maxima])

HSP 1 Score: 678.7 bits (1750), Expect = 1.1e-191
Identity = 341/359 (94.99%), Postives = 343/359 (95.54%), Query Frame = 0


Query: 1   MAEDFQAAICGDNWWSSSRTMLVAVGGLSPCSMGIGDLAWPPADDFSDIKPKSTANYSDN 60
           MAEDFQAAICGDNWWSSSRTMLVAVGGLSPCSMGIGDLAWPPADDFSDIKPKSTANYSDN
Sbjct: 1   MAEDFQAAICGDNWWSSSRTMLVAVGGLSPCSMGIGDLAWPPADDFSDIKPKSTANYSDN 60

Query: 61  QNSMFFQDYSTSDHWNQPHDLLLKRGDYLLEQNGVNCMNCCSSTSQGLFPLDSALYGYPS 120
            NSM FQDYSTSDHWNQPHDLLLKRGDYLLEQNGVNCMNCCSSTSQGLFPLDSALYGYPS
Sbjct: 61  HNSMVFQDYSTSDHWNQPHDLLLKRGDYLLEQNGVNCMNCCSSTSQGLFPLDSALYGYPS 120

Query: 121 PSTKLLHGLYXXXXXXXXXXXXXPHSLFNAATTSINTNYPSNYLIKPSLPIPPPSQPVSP 180
           PSTKLLHGLY     XXXXXX  PHSLFN  TTSINTNYPSNYLIKPSLPIPPPSQPVSP
Sbjct: 121 PSTKLLHGLY---NDXXXXXXPDPHSLFN-TTTSINTNYPSNYLIKPSLPIPPPSQPVSP 180

Query: 181 ALHFTNNTPFWNASHAPPSIEIPQNSRLGFKAMNNGNCEDGEEARKGDKNEPPVSKRPRI 240
           ALHFTNNTPFWN SHAPPSIEIPQNSRLGFKAMNNGN EDGEEARKGDKNEPPV KRPRI
Sbjct: 181 ALHFTNNTPFWNTSHAPPSIEIPQNSRLGFKAMNNGNYEDGEEARKGDKNEPPVLKRPRI 240

Query: 241 ETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSLLSTPY 300
           ETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSLLSTPY
Sbjct: 241 ETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSLLSTPY 300

Query: 301 MKNNNGITPLQQQQVSEKADPKQDLKSRGLCLVPISSTFPVTNATTTDFWSPTFGGTFR 360
           MKNNNGITP+Q QQVSEKA+PKQDLKSRGLCLVPISSTFPVTNATT DFWSPTFGGTFR
Sbjct: 301 MKNNNGITPVQHQQVSEKANPKQDLKSRGLCLVPISSTFPVTNATTADFWSPTFGGTFR 355

[Close]

BLAST of Carg13727 vs. TAIR10
Match: AT1G61660.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 180.6 bits (457), Expect = 1.7e-45
Identity = 152/406 (37.44%), Postives = 198/406 (48.77%), Query Frame = 0


Query: 1   MAEDFQ--AAICGDN---WWSSSRTMLVAVGG-LSPCSMGIGDLAWPPADDFSDIKP--K 60
           MAE+F+  A+ICG     WW+S R+++      LSPC    G  A   ++DFS  +   K
Sbjct: 1   MAEEFKATASICGGGXGAWWNSPRSVMSPSDHFLSPC---FG--AAITSNDFSSQENHLK 60

Query: 61  STANYSDNQNSMFFQDYSTSDHWNQPHDLLLKRGDYLLEQNGVNCMNCCSSTSQGLFPLD 120
           S    +DN N +F Q  + SD       +     D  L+  G+   + CSS        +
Sbjct: 61  SRMTCTDNNNIVFGQREADSDSGGSTVTM-----DSTLQMMGLGFSSNCSSDWNQTILQE 120

Query: 121 SALYGYPSPSTKLLHGLYXXXXXXXXXXXXXPHSLFNAATTSINTNYPSNYLIKPSLPIP 180
                +   S    HG               P+ L  A ++S +T+  S+ +     P P
Sbjct: 121 DLNSSFIRSSQDQDHG------QGFLSTTTSPYILNPACSSSPSTSSSSSLIRTFYDPEP 180

Query: 181 PPSQPVS--------PALHFTNNT---------------------PFWNAS------HAP 240
            P   VS        P L + N T                     PFWN+S      +  
Sbjct: 181 SPYNFVSTTSGSINDPQLSWANKTNPHHQVAYGLINSFSNNANSRPFWNSSSTTNLNNTT 240

Query: 241 PS--IEIPQ--NSRLGFKAMNNGNCEDGEEARKGDKNEPPVSKRPRIETPSPLPTFKVRK 300
           PS  +  PQ  ++RL  K  N       E  ++   NE   +K+PR+ TPSPLPTFKVRK
Sbjct: 241 PSNFVTTPQIISTRLEDKTKNLKTRAQSESLKRAKDNE-SAAKKPRVTTPSPLPTFKVRK 300

Query: 301 EKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSLLSTPYMK---NNNGITPL 357
           E L D++T+LQQLVSPFGKTDTASVL EAIEYIKFLHDQV++LSTPYMK   +N      
Sbjct: 301 ENLRDQITSLQQLVSPFGKTDTASVLQEAIEYIKFLHDQVTVLSTPYMKQGASNQQXXXX 360

[Close]

BLAST of Carg13727 vs. TAIR10
Match: AT3G20640.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 179.5 bits (454), Expect = 3.7e-45
Identity = 107/220 (48.64%), Postives = 135/220 (61.36%), Query Frame = 0


Query: 160 PSNYLIKPSLPIPPPSQPVSPALHFTNNTPFWN---------------ASHAPPSIEIPQ 219
           PS + ++ S    PP +P SP L F+NN  FWN               +S+  P+++ PQ
Sbjct: 241 PSTWFLRSS----PPPKPHSP-LRFSNNATFWNPAAAGNAGAPPPHDASSNFFPALQPPQ 300

Query: 220 NSRLGF----KAMNNGNCEDGEEARKGDKNEPPVSKRPRIETPSPLPTFKVRKEKLGDRV 279
                F    K ++        E ++G  +  P +KR + E  SP P FK RKEK+GDR+
Sbjct: 301 IHPQSFDEQPKNISEIRDSSSNEVKRGGNDHQPAAKRAKSEAASPSPAFK-RKEKMGDRI 360

Query: 280 TALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSLLSTPYMKNNNGITPLQQQQVSE-KA 339
            ALQQLVSPFGKTD ASVL EAIEYIKFLH QVS LS PYMK+   +   Q    +E + 
Sbjct: 361 AALQQLVSPFGKTDAASVLSEAIEYIKFLHQQVSALSNPYMKSGASLQHQQSDHSTELEV 420

Query: 340 DPKQDLKSRGLCLVPISSTFPVTNATTTDFWSPTFGGTFR 360
             + DL+SRGLCLVP+SSTFPVT+ TT DFW+PTFGGTFR
Sbjct: 421 SEEPDLRSRGLCLVPVSSTFPVTHDTTVDFWTPTFGGTFR 454

[Close]

BLAST of Carg13727 vs. TAIR10
Match: AT4G05170.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 137.1 bits (344), Expect = 2.1e-32
Identity = 81/153 (52.94%), Postives = 101/153 (66.01%), Query Frame = 0


Query: 210 FKAMNNGNCEDGEEARKGDKNEPPVSKRPRIETPSPLPTFKVRKEKLGDRVTALQQLVSP 269
           +K + +   E+ EE    D+  P + KRPR+ET SPLP+FKVRKEKLGDR+TALQQLVSP
Sbjct: 75  YKNLTSKRSEELEE--NSDEYSPRLLKRPRLETLSPLPSFKVRKEKLGDRITALQQLVSP 134

Query: 270 FGKTDTASVLHEAIEYIKFLHDQVSLLSTPYMKNNNGITPLQQQQVSEK----------- 329
           FGKTDTASVL+EA+EYIKFL +QV++LS P     N I  +QQQQ S K           
Sbjct: 135 FGKTDTASVLNEAVEYIKFLQEQVTVLSNP---EQNTIGSVQQQQCSNKKXXXXXXXXXX 194

Query: 330 ----ADPKQDLKSRGLCLVPISSTFPVTNATTT 348
                    DL SRGLCL+PIS+++PV  A  +
Sbjct: 195 XXXXXXXXXDLSSRGLCLMPISASYPVAAAAAS 222

[Close]

BLAST of Carg13727 vs. TAIR10
Match: AT4G21340.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 135.2 bits (339), Expect = 8.0e-32
Identity = 74/129 (57.36%), Postives = 97/129 (75.19%), Query Frame = 0


Query: 236 KRPRIETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVS- 295
           KRPR+ETPS  P+FKVRKEKLGDR+TALQQLVSPFGKTDTASVLH+AI+YIKFL +Q++ 
Sbjct: 176 KRPRLETPSHFPSFKVRKEKLGDRITALQQLVSPFGKTDTASVLHDAIDYIKFLQEQITE 235

Query: 296 -LLSTPYMKNNNGITPLQQQQVSEKA---------DPKQDLKSRGLCLVPISSTF--PVT 352
            + ++P++   N I   +Q+Q S+K+          P+QDL+SRGLCL+PISSTF  P  
Sbjct: 236 KVSTSPHL---NSIGSGEQKQWSDKSSNNTHNQNCSPRQDLRSRGLCLMPISSTFSTPPQ 295

[Close]

BLAST of Carg13727 vs. TAIR10
Match: AT2G20100.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 123.2 bits (308), Expect = 3.2e-28
Identity = 70/159 (44.03%), Postives = 89/159 (55.97%), Query Frame = 0


Query: 235 SKRPRIETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVS 294
           +K+P+++ PS   T KVRKEKLG R+ +L QLVSPFGKTDTASVL EAI YI+FLH Q+ 
Sbjct: 204 NKKPKLQVPSSQSTLKVRKEKLGGRIASLHQLVSPFGKTDTASVLSEAIGYIRFLHSQIE 263

Query: 295 LLSTPY--------------MKNNNGITP--------------------LQQQQVSEKAD 354
            LS PY               +N NGI P                       Q+ +   +
Sbjct: 264 ALSLPYFGTPSRNNMMHQHAQRNMNGIFPEDPGQLVNEYCMKRGVSLSSTDNQKSNPNEE 323

Query: 355 PKQDLKSRGLCLVPISSTFPVTNATTTDFWSPTFGGTFR 360
           P +DL+SRGLCLVPIS T  V +    D+W+P FG T +
Sbjct: 324 PMKDLRSRGLCLVPISCTLQVGSDNGADYWAPAFGTTLQ 362

[Close]

BLAST of Carg13727 vs. Swiss-Prot
Match: sp|Q94JL3|BH112_ARATH (Transcription factor bHLH112 OS=Arabidopsis thaliana OX=3702 GN=BHLH112 PE=1 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.0e-44
Identity = 152/406 (37.44%), Postives = 198/406 (48.77%), Query Frame = 0


Query: 1   MAEDFQ--AAICGDN---WWSSSRTMLVAVGG-LSPCSMGIGDLAWPPADDFSDIKP--K 60
           MAE+F+  A+ICG     WW+S R+++      LSPC    G  A   ++DFS  +   K
Sbjct: 1   MAEEFKATASICGGGXGAWWNSPRSVMSPSDHFLSPC---FG--AAITSNDFSSQENHLK 60

Query: 61  STANYSDNQNSMFFQDYSTSDHWNQPHDLLLKRGDYLLEQNGVNCMNCCSSTSQGLFPLD 120
           S    +DN N +F Q  + SD       +     D  L+  G+   + CSS        +
Sbjct: 61  SRMTCTDNNNIVFGQREADSDSGGSTVTM-----DSTLQMMGLGFSSNCSSDWNQTILQE 120

Query: 121 SALYGYPSPSTKLLHGLYXXXXXXXXXXXXXPHSLFNAATTSINTNYPSNYLIKPSLPIP 180
                +   S    HG               P+ L  A ++S +T+  S+ +     P P
Sbjct: 121 DLNSSFIRSSQDQDHG------QGFLSTTTSPYILNPACSSSPSTSSSSSLIRTFYDPEP 180

Query: 181 PPSQPVS--------PALHFTNNT---------------------PFWNAS------HAP 240
            P   VS        P L + N T                     PFWN+S      +  
Sbjct: 181 SPYNFVSTTSGSINDPQLSWANKTNPHHQVAYGLINSFSNNANSRPFWNSSSTTNLNNTT 240

Query: 241 PS--IEIPQ--NSRLGFKAMNNGNCEDGEEARKGDKNEPPVSKRPRIETPSPLPTFKVRK 300
           PS  +  PQ  ++RL  K  N       E  ++   NE   +K+PR+ TPSPLPTFKVRK
Sbjct: 241 PSNFVTTPQIISTRLEDKTKNLKTRAQSESLKRAKDNE-SAAKKPRVTTPSPLPTFKVRK 300

Query: 301 EKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSLLSTPYMK---NNNGITPL 357
           E L D++T+LQQLVSPFGKTDTASVL EAIEYIKFLHDQV++LSTPYMK   +N      
Sbjct: 301 ENLRDQITSLQQLVSPFGKTDTASVLQEAIEYIKFLHDQVTVLSTPYMKQGASNQQXXXX 360

[Close]

BLAST of Carg13727 vs. Swiss-Prot
Match: sp|Q8GXT3|BH123_ARATH (Transcription factor bHLH123 OS=Arabidopsis thaliana OX=3702 GN=BHLH123 PE=1 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 6.7e-44
Identity = 107/220 (48.64%), Postives = 135/220 (61.36%), Query Frame = 0


Query: 160 PSNYLIKPSLPIPPPSQPVSPALHFTNNTPFWN---------------ASHAPPSIEIPQ 219
           PS + ++ S    PP +P SP L F+NN  FWN               +S+  P+++ PQ
Sbjct: 241 PSTWFLRSS----PPPKPHSP-LRFSNNATFWNPAAAGNAGAPPPHDASSNFFPALQPPQ 300

Query: 220 NSRLGF----KAMNNGNCEDGEEARKGDKNEPPVSKRPRIETPSPLPTFKVRKEKLGDRV 279
                F    K ++        E ++G  +  P +KR + E  SP P FK RKEK+GDR+
Sbjct: 301 IHPQSFDEQPKNISEIRDSSSNEVKRGGNDHQPAAKRAKSEAASPSPAFK-RKEKMGDRI 360

Query: 280 TALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSLLSTPYMKNNNGITPLQQQQVSE-KA 339
            ALQQLVSPFGKTD ASVL EAIEYIKFLH QVS LS PYMK+   +   Q    +E + 
Sbjct: 361 AALQQLVSPFGKTDAASVLSEAIEYIKFLHQQVSALSNPYMKSGASLQHQQSDHSTELEV 420

Query: 340 DPKQDLKSRGLCLVPISSTFPVTNATTTDFWSPTFGGTFR 360
             + DL+SRGLCLVP+SSTFPVT+ TT DFW+PTFGGTFR
Sbjct: 421 SEEPDLRSRGLCLVPVSSTFPVTHDTTVDFWTPTFGGTFR 454

[Close]

BLAST of Carg13727 vs. Swiss-Prot
Match: sp|Q9M0X8|BH114_ARATH (Transcription factor bHLH114 OS=Arabidopsis thaliana OX=3702 GN=BHLH114 PE=2 SV=2)

HSP 1 Score: 137.1 bits (344), Expect = 3.8e-31
Identity = 81/153 (52.94%), Postives = 101/153 (66.01%), Query Frame = 0


Query: 210 FKAMNNGNCEDGEEARKGDKNEPPVSKRPRIETPSPLPTFKVRKEKLGDRVTALQQLVSP 269
           +K + +   E+ EE    D+  P + KRPR+ET SPLP+FKVRKEKLGDR+TALQQLVSP
Sbjct: 135 YKNLTSKRSEELEE--NSDEYSPRLLKRPRLETLSPLPSFKVRKEKLGDRITALQQLVSP 194

Query: 270 FGKTDTASVLHEAIEYIKFLHDQVSLLSTPYMKNNNGITPLQQQQVSEK----------- 329
           FGKTDTASVL+EA+EYIKFL +QV++LS P     N I  +QQQQ S K           
Sbjct: 195 FGKTDTASVLNEAVEYIKFLQEQVTVLSNP---EQNTIGSVQQQQCSNKKXXXXXXXXXX 254

Query: 330 ----ADPKQDLKSRGLCLVPISSTFPVTNATTT 348
                    DL SRGLCL+PIS+++PV  A  +
Sbjct: 255 XXXXXXXXXDLSSRGLCLMPISASYPVAAAAAS 282

[Close]

BLAST of Carg13727 vs. Swiss-Prot
Match: sp|Q8VZ22|BH103_ARATH (Transcription factor bHLH103 OS=Arabidopsis thaliana OX=3702 GN=BHLH103 PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.4e-30
Identity = 74/129 (57.36%), Postives = 97/129 (75.19%), Query Frame = 0


Query: 236 KRPRIETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVS- 295
           KRPR+ETPS  P+FKVRKEKLGDR+TALQQLVSPFGKTDTASVLH+AI+YIKFL +Q++ 
Sbjct: 176 KRPRLETPSHFPSFKVRKEKLGDRITALQQLVSPFGKTDTASVLHDAIDYIKFLQEQITE 235

Query: 296 -LLSTPYMKNNNGITPLQQQQVSEKA---------DPKQDLKSRGLCLVPISSTF--PVT 352
            + ++P++   N I   +Q+Q S+K+          P+QDL+SRGLCL+PISSTF  P  
Sbjct: 236 KVSTSPHL---NSIGSGEQKQWSDKSSNNTHNQNCSPRQDLRSRGLCLMPISSTFSTPPQ 295

[Close]

BLAST of Carg13727 vs. Swiss-Prot
Match: sp|Q7XHI5|BH133_ARATH (Transcription factor bHLH133 OS=Arabidopsis thaliana OX=3702 GN=BHLH133 PE=1 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 5.7e-27
Identity = 70/159 (44.03%), Postives = 89/159 (55.97%), Query Frame = 0


Query: 235 SKRPRIETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVS 294
           +K+P+++ PS   T KVRKEKLG R+ +L QLVSPFGKTDTASVL EAI YI+FLH Q+ 
Sbjct: 204 NKKPKLQVPSSQSTLKVRKEKLGGRIASLHQLVSPFGKTDTASVLSEAIGYIRFLHSQIE 263

Query: 295 LLSTPY--------------MKNNNGITP--------------------LQQQQVSEKAD 354
            LS PY               +N NGI P                       Q+ +   +
Sbjct: 264 ALSLPYFGTPSRNNMMHQHAQRNMNGIFPEDPGQLVNEYCMKRGVSLSSTDNQKSNPNEE 323

Query: 355 PKQDLKSRGLCLVPISSTFPVTNATTTDFWSPTFGGTFR 360
           P +DL+SRGLCLVPIS T  V +    D+W+P FG T +
Sbjct: 324 PMKDLRSRGLCLVPISCTLQVGSDNGADYWAPAFGTTLQ 362

[Close]

BLAST of Carg13727 vs. TrEMBL
Match: tr|A0A0A0KHH2|A0A0A0KHH2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516730 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 7.8e-98
Identity = 231/422 (54.74%), Postives = 260/422 (61.61%), Query Frame = 0


Query: 1   MAEDFQAAICGDNWWSSSRTMLVAVGGLSPCSMGIGDLAWPPADDFSDIKPKSTANYSDN 60
           MAEDFQA +CGDNWW+SSR+MLVAVGGLSPCS+GI DL+WPP       +P S A  S N
Sbjct: 1   MAEDFQAPVCGDNWWNSSRSMLVAVGGLSPCSVGIADLSWPP-------QPPSAATDSVN 60

Query: 61  QN-SMFFQDYS-------------TSDHWNQPHDLLLKRG-------DYLLEQ--NGVNC 120
            N SM FQDYS             TS+HWNQ  DLL   G       +  L+Q  +G + 
Sbjct: 61  NNSSMLFQDYSTFQMMGFALSSSTTSEHWNQSQDLLNSNGIPTNFSSENGLKQGNDGDDY 120

Query: 121 MNCCSSTSQ----GLFPLDSALYGYPSPSTKLLH-GLYXXXXXXXXXXXXXPHSLFN--- 180
           +NC S+ +     GLFP++S+LYGY SPSTKLL   LY             PHSLFN   
Sbjct: 121 LNCSSTNTTNCQGGLFPVESSLYGYSSPSTKLLQTNLY-------EDDNSDPHSLFNXXX 180

Query: 181 -----------AATTSINTNYPSNYLIKPSLPIPPPSQPVSPALHFTNNTPFWNASHA-- 240
                                                             PFWNAS +  
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFWNASSSNS 240

Query: 241 -PPSIEI---------PQNSRLGFKAMNNGNCEDG-EEARKGDKN-----EPPVSKRPRI 300
            P  I            QN+ L FK++N    EDG ++ +KGDKN     EP V KRPRI
Sbjct: 241 IPQGIASLLEDKNNPKSQNNTLAFKSVN----EDGQDQVKKGDKNSAITTEPTVFKRPRI 300

Query: 301 ETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSLLSTPY 360
           ETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVS+LSTPY
Sbjct: 301 ETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSVLSTPY 360

[Close]

BLAST of Carg13727 vs. TrEMBL
Match: tr|A0A1S3AZI8|A0A1S3AZI8_CUCME (transcription factor bHLH112-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484572 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 5.6e-96
Identity = 232/423 (54.85%), Postives = 261/423 (61.70%), Query Frame = 0


Query: 1   MAEDFQAAICGDNWWSSSRTMLVAVGGLSPCSMGIGDLAWPPADDFSDIKPKSTANYSDN 60
           MAEDFQA ICGDNWW+SSR+MLVAVGGLSPCS+GI DL+WPP       +P S A  S N
Sbjct: 1   MAEDFQAPICGDNWWNSSRSMLVAVGGLSPCSVGIADLSWPP-------QPPSAATDSVN 60

Query: 61  QN-SMFFQDYS-------------TSDHWNQPHDLLLKRG-------DYLLEQ--NGVNC 120
            N SM FQDYS             TS+HWNQ  DLL   G       +  L+Q  +G + 
Sbjct: 61  NNSSMLFQDYSTFQMMGFALSSSTTSEHWNQSQDLLNSNGIPTNFSSENGLKQGNDGDDY 120

Query: 121 MNCCSSTSQ----GLFPLDSALYGYPSPSTKLLH-GLYXXXXXXXXXXXXXPHSLFNAAT 180
           +NC S+ +     GLFP++S+LYGY SPSTKLL   LY             P SLFN +T
Sbjct: 121 LNCSSTNTTNCQGGLFPVESSLYGYSSPSTKLLQTNLY-------EDDNSDPRSLFN-ST 180

Query: 181 TSI---------------NTNYPSNYLIKPSLPIPPPSQPVSPALHFTNNTPFWNASHA- 240
            SI                                                PFWNAS + 
Sbjct: 181 PSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFWNASSSN 240

Query: 241 --PPSIEI---------PQNSRLGFKAMNNGNCEDG-EEARKGDKN-----EPPVSKRPR 300
             P  I            QN+ L FK+MN    EDG ++ +K DKN     EP V KRPR
Sbjct: 241 SIPQGIASLLEDKNNPKSQNNTLAFKSMN----EDGQDQVKKVDKNSAITTEPTVFKRPR 300

Query: 301 IETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSLLSTP 360
           IETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVS+LSTP
Sbjct: 301 IETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSVLSTP 360

[Close]

BLAST of Carg13727 vs. TrEMBL
Match: tr|A0A1S3AZZ2|A0A1S3AZZ2_CUCME (transcription factor bHLH112-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484572 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 6.8e-94
Identity = 231/423 (54.61%), Postives = 259/423 (61.23%), Query Frame = 0


Query: 1   MAEDFQAAICGDNWWSSSRTMLVAVGGLSPCSMGIGDLAWPPADDFSDIKPKSTANYSDN 60
           MAEDFQA ICGDNWW+SSR+MLVAVGGLSPCS+GI DL+WPP       +P S A  S N
Sbjct: 1   MAEDFQAPICGDNWWNSSRSMLVAVGGLSPCSVGIADLSWPP-------QPPSAATDSVN 60

Query: 61  QN-SMFFQDYS-------------TSDHWNQPHDLLLKRG-------DYLLEQ--NGVNC 120
            N SM FQDYS             TS+HWNQ  DLL   G       +  L+Q  +G + 
Sbjct: 61  NNSSMLFQDYSTFQMMGFALSSSTTSEHWNQSQDLLNSNGIPTNFSSENGLKQGNDGDDY 120

Query: 121 MNCCSSTSQ----GLFPLDSALYGYPSPSTKLLH-GLYXXXXXXXXXXXXXPHSLFNAAT 180
           +NC S+ +     GLFP++S+LYGY SPSTKLL   LY             P SLFN +T
Sbjct: 121 LNCSSTNTTNCQGGLFPVESSLYGYSSPSTKLLQTNLY-------EDDNSDPRSLFN-ST 180

Query: 181 TSI---------------NTNYPSNYLIKPSLPIPPPSQPVSPALHFTNNTPFWNASHA- 240
            SI                                                PFWNAS + 
Sbjct: 181 PSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFWNASSSN 240

Query: 241 --PPSIEI---------PQNSRLGFKAMNNGNCEDG-EEARKGDKN-----EPPVSKRPR 300
             P  I            QN+ L FK+MN    EDG ++ +K DKN     EP V KRPR
Sbjct: 241 SIPQGIASLLEDKNNPKSQNNTLAFKSMN----EDGQDQVKKVDKNSAITTEPTVFKRPR 300

Query: 301 IETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSLLSTP 360
           IETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQV  LSTP
Sbjct: 301 IETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQV--LSTP 360

[Close]

BLAST of Carg13727 vs. TrEMBL
Match: tr|A0A2C9U833|A0A2C9U833_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_16G015400 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 9.3e-67
Identity = 205/491 (41.75%), Postives = 241/491 (49.08%), Query Frame = 0


Query: 1   MAEDFQAAICGDNWWSSSRTMLVAVGGLSPCS--------MGIGDLAWPPADDFSDIKPK 60
           MAE+FQ  ICG NWW+ S T L   GG SPCS        MG    +W  A D  D+KP+
Sbjct: 1   MAEEFQTGICGGNWWNLS-TSLFMGGGSSPCSTTGINAADMGNTYGSW-MATDVMDLKPR 60

Query: 61  STANYSD-----NQNSMFFQD---------------------------------YSTSDH 120
           S    S+     N  S F Q+                                  S+S  
Sbjct: 61  SCKLDSNNIINCNSISEFLQENSQKPQQTDSDSVGSSILMDSSLQMMGFGLSSSSSSSTD 120

Query: 121 WNQ----------PHDLLLK----------------------------RGDYLLEQNGVN 180
           W+Q           ++ +L+                              D+ LEQ  VN
Sbjct: 121 WSQTLLRGNGRAESYNSILQEEMNSSSQIQKDWSPTVEDSSINGFKAINQDFSLEQQSVN 180

Query: 181 CM----NCCSSTSQGL---FPLDSALYGYPSPSTKLLHGLYXXXXXXXXXXXXXPHSLFN 240
            +    N  ++T +GL   F + SA YGYPS    L+  L+               SLFN
Sbjct: 181 PLSSSGNSTATTCEGLSIGFSMGSASYGYPS---TLIQNLF-------DSDPQPQQSLFN 240

Query: 241 AATTSINTNYPSNY----------------LIKPSLP--IPPPSQPVSPALHFTNNTPFW 300
             T  IN +  SNY                 ++PSLP   PPP QP    LHF+NNTPFW
Sbjct: 241 NRT--INCSSTSNYGTIFNEPSPTWPKLAPFLEPSLPKQQPPPPQPAG-GLHFSNNTPFW 300

Query: 301 NA-------------SHAPPSIEIP------QNSRLGFKAMNNGNCEDGEEARKGDKNEP 360
           N+             S + P   +P          L  K  N    + G   +KG +   
Sbjct: 301 NSSATAINDIRPSFVSSSQPQFLVPTFEEKRSCPNLNTKTNNEEVRDSGSVVKKGSE--- 360

[Close]

BLAST of Carg13727 vs. TrEMBL
Match: tr|D7SSM5|D7SSM5_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0274g00070 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.8e-65
Identity = 195/480 (40.62%), Postives = 231/480 (48.12%), Query Frame = 0


Query: 1   MAEDFQAAICGDNWWSSSRTMLVAVGGLSPCSMGI---GDLAWPPADDFSDIKPKS---T 60
           MA++FQ  +CG  WW+ +R     +GG SPCS  +   G   WP   +  DIK +S   +
Sbjct: 1   MADEFQTGVCGGTWWNPARNSF--IGGPSPCSTALNDTGSFGWP--TEMVDIKARSCEES 60

Query: 61  ANYSDNQNSMFFQDY-------------------------------STSDHWNQP----- 120
           A+ SD  +S+ FQD                                ST+  WN       
Sbjct: 61  ASVSD--SSIVFQDIQKPQQPDSASGGGSMLMESTLQMMGFGLSSSSTTTDWNPALIRGS 120

Query: 121 -------HDLL---------------------------------------LKRGDYLLEQ 180
                  H +L                                       + +G + L+Q
Sbjct: 121 GRAESNYHSMLQDDMSSRLNGMDSPQIQKDWSPKNFSTGGEDSSICALKPMNQG-FALDQ 180

Query: 181 NGVNCMN-------CCSSTSQGLFPLDSALYGYPSPSTKLLHGLYXXXXXXXXXXXXXPH 240
             +N +N        C   S G FP+ SA YGYPS    LL GLY               
Sbjct: 181 QRLNSINSSGDSTVTCQGFSSG-FPMGSASYGYPS---TLLQGLYDPDPQPQQYLFDNRS 240

Query: 241 SLFNAAT---TSINTNYPSNYLIKPSLPIPPPSQPVSPALHFTNNTPFWNASHA------ 300
             +++     TS+N   PS     P +    P Q  +  LHFTNNTPFWNAS A      
Sbjct: 241 MNYSSMANYRTSMNELSPSWPKYSPYMKPSLPKQQPNSHLHFTNNTPFWNASAAALNDIR 300

Query: 301 -------------PPSIEIPQNSRLGFKAMNNGNCEDGEEARKGDKNEPPVSKRPRIETP 360
                        P   E P  S+L  K +N     D     K    E P  KRPRIETP
Sbjct: 301 ASFFPSPQSQFLTPTFEEKPNCSKLTTK-LNTEEVRDSGSVLKKSSAE-PAFKRPRIETP 360

The following BLAST results are available for this feature:

BLAST of Carg13727 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022950200.1	7.7e-198	98.05	transcription factor bHLH112-like isoform X1 [Cucurbita moschata]	[more]
XP_022950201.1	2.1e-195	97.49	transcription factor bHLH112-like isoform X2 [Cucurbita moschata]	[more]
XP_023544490.1	2.7e-195	97.77	transcription factor bHLH112-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023544491.1	7.4e-193	97.21	transcription factor bHLH112-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022977366.1	1.1e-191	94.99	transcription factor bHLH112-like [Cucurbita maxima]	[more]

BLAST of Carg13727 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G61660.1	1.7e-45	37.44	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G20640.1	3.7e-45	48.64	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G05170.1	2.1e-32	52.94	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G21340.1	8.0e-32	57.36	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G20100.1	3.2e-28	44.03	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

BLAST of Carg13727 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q94JL3\|BH112_ARATH	3.0e-44	37.44	Transcription factor bHLH112 OS=Arabidopsis thaliana OX=3702 GN=BHLH112 PE=1 SV=...	[more]
sp\|Q8GXT3\|BH123_ARATH	6.7e-44	48.64	Transcription factor bHLH123 OS=Arabidopsis thaliana OX=3702 GN=BHLH123 PE=1 SV=...	[more]
sp\|Q9M0X8\|BH114_ARATH	3.8e-31	52.94	Transcription factor bHLH114 OS=Arabidopsis thaliana OX=3702 GN=BHLH114 PE=2 SV=...	[more]
sp\|Q8VZ22\|BH103_ARATH	1.4e-30	57.36	Transcription factor bHLH103 OS=Arabidopsis thaliana OX=3702 GN=BHLH103 PE=1 SV=...	[more]
sp\|Q7XHI5\|BH133_ARATH	5.7e-27	44.03	Transcription factor bHLH133 OS=Arabidopsis thaliana OX=3702 GN=BHLH133 PE=1 SV=...	[more]

BLAST of Carg13727 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KHH2\|A0A0A0KHH2_CUCSA	7.8e-98	54.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516730 PE=4 SV=1	[more]
tr\|A0A1S3AZI8\|A0A1S3AZI8_CUCME	5.6e-96	54.85	transcription factor bHLH112-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC10348...	[more]
tr\|A0A1S3AZZ2\|A0A1S3AZZ2_CUCME	6.8e-94	54.61	transcription factor bHLH112-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC10348...	[more]
tr\|A0A2C9U833\|A0A2C9U833_MANES	9.3e-67	41.75	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_16G015400 PE=4 SV=...	[more]
tr\|D7SSM5\|D7SSM5_VITVI	1.8e-65	40.63	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0274g00070 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity

Vocabulary: **INTERPRO**
Term	Definition
IPR011598	bHLH_dom
IPR036638	HLH_DNA-bd_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13727-RA	Carg13727-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	G3DSA:4.10.280.10		coord: 250..305 e-value: 1.4E-5 score: 26.9
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 250..307
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 212..247
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 218..236
None	No IPR available	PANTHER	PTHR16223:SF106	SUBFAMILY NOT NAMED	coord: 1..70 coord: 88..357
None	No IPR available	PANTHER	PTHR16223	FAMILY NOT NAMED	coord: 1..70 coord: 88..357
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 240..289 score: 11.668
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	CDD	cd00083	HLH	coord: 250..294 e-value: 3.23293E-5 score: 40.2751

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg13727	Cla001331	Watermelon (97103) v1	carwmB0931
Carg13727	Csa1G070590	Cucumber (Chinese Long) v2	carcuB0945
Carg13727	Csa6G516730	Cucumber (Chinese Long) v2	carcuB0948
Carg13727	MELO3C007341	Melon (DHL92) v3.5.1	carmeB0918
Carg13727	MELO3C002522	Melon (DHL92) v3.5.1	carmeB0914
Carg13727	ClCG03G005260	Watermelon (Charleston Gray)	carwcgB0908
Carg13727	ClCG01G022330	Watermelon (Charleston Gray)	carwcgB0906
Carg13727	CSPI01G11370	Wild cucumber (PI 183967)	carcpiB0968
Carg13727	CSPI06G34010	Wild cucumber (PI 183967)	carcpiB0971
Carg13727	Cucsa.045680	Cucumber (Gy14) v1	carcgyB1047
Carg13727	CmaCh03G005080	Cucurbita maxima (Rimu)	carcmaB1276
Carg13727	CmaCh13G006970	Cucurbita maxima (Rimu)	carcmaB1274
Carg13727	CmaCh07G002910	Cucurbita maxima (Rimu)	carcmaB1279
Carg13727	CmoCh03G005290	Cucurbita moschata (Rifu)	carcmoB1246
Carg13727	CmoCh07G002810	Cucurbita moschata (Rifu)	carcmoB1250
Carg13727	CmoCh13G007170	Cucurbita moschata (Rifu)	carcmoB1244
Carg13727	Lsi01G003750	Bottle gourd (USVL1VR-Ls)	carlsiB846
Carg13727	Cp4.1LG10g09470	Cucurbita pepo (Zucchini)	carcpeB1288
Carg13727	Cp4.1LG19g07670	Cucurbita pepo (Zucchini)	carcpeB1289
Carg13727	Cp4.1LG20g03900	Cucurbita pepo (Zucchini)	carcpeB1291
Carg13727	CsGy1G011300	Cucumber (Gy14) v2	carcgybB0919
Carg13727	CsGy6G033610	Cucumber (Gy14) v2	carcgybB0922
Carg13727	MELO3C007341.2	Melon (DHL92) v3.6.1	carmedB0925
Carg13727	MELO3C002522.2	Melon (DHL92) v3.6.1	carmedB0921
Carg13727	CsaV3_6G049510	Cucumber (Chinese Long) v3	carcucB0972
Carg13727	CsaV3_1G011460	Cucumber (Chinese Long) v3	carcucB0969
Carg13727	Cla97C01G022210	Watermelon (97103) v2	carwmbB0972
Carg13727	Cla97C03G056500	Watermelon (97103) v2	carwmbB0976
Carg13727	Bhi03G000391	Wax gourd	carwgoB1075

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg13727	Carg07823	Silver-seed gourd	carcarB563

The following block(s) are covering this gene:


Gene	Organism	Block
Carg13727	Silver-seed gourd	carcarB037
Carg13727	Silver-seed gourd	carcarB637
Carg13727	Cucurbita moschata (Rifu)	carcmoB1245
Carg13727	Bottle gourd (USVL1VR-Ls)	carlsiB848
Carg13727	Watermelon (97103) v1	carwmB0930
Carg13727	Watermelon (97103) v2	carwmbB0974
Carg13727	Wax gourd	carwgoB1077