CsaV3_1G009720 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G009720
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionProtein transport protein Sec61 subunit gamma
Locationchr1 : 6012907 .. 6016113 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAATTATGATTTCCATATCTATTTAACTGGATGTCTCAAATATTCAACTCAATACACGTATGTTCAAAGTGGGTATAATTTAAAATTGACACAATTTTTGTATTAATGTCGTGGAAGTTTGATTTCTACACTCATATATGGTTAAAATATGAAAGAAGACAAACATGAGCAACACAGAACCATCAATATGAAATACAATGAAACTAACGAAAATGTGAAAGTAAAAGTGGAAATCTCATGGGATTTGCCCCATTATTATACCATAAACTTATCTATTCGTTATTCATATCAAGATAAAAATAATTAGGAATGTCTAACATATAATATATTTAGAGTCAAATTTTTAGAAAACGTTTCTTAAAATTTGATAACTAAAAACGAAACTCTAAATTTATCATTGATCAAATTTAAAGTAAAATTAAAACAAAAAATTAGGTGGCTGTGTTATTTACCATAGTTTAGCCTCAAGCAAGCACACCATGGTCGATGATTCAGGGGTATTTCCGATATTTCAGATATTGCGACGAGAGTCATCAATTTTGACCCAATCATCCCTAGTCGTGTAGCGCTCAAAGTATTTCTTCCATCCTTATTAACCCCCACGCGGCCACAATTCGTTCAAACCGGAAACCAAATTTCGCGATAAACATTTCTTTTGGTGACGCTTCCTTCCGATCTCGGACCCATGGATGCCGTAGATTCAGTCGTTGATCCTCTCAGAGAGTTCGCCAAGGATAGCGTTCGCCTCGTTAAGAGATGTCATAAACCCGATCGCAAGGGTATGTTTCTTGCTTTCACATTGTATTGCATAGATCTGATTCGATTCAGGTCTTGGATTTTTGTTTTTTTTTTCCTTTCAATTTGATTTAATTCAACGATTTGGTGATGTAGAATTCACCAAGGTTGCCGTTCGTACCGCTATCGGCTTCGTTGTGATGGGATTTGTAGGGTTCTTTGTCAAGCTAATCTTCATTCCGATCAACAATATCATCGTCGGATCTGGTTAGTTAGGTATGCATCCAAATTCAATAGATCTTCTATTATTTCTTTTCGATCTGACTTGTATTGGTTCTGCATAGCATCGTGGTCATACTGTTCAAGATCTCTGCAATTATGGAACGGATCGATAATTTTTTCTTAAATTTCCGTTCGATGCACGCGCATGCAATATCTTGAAATCCTTATGACATTTATATTCCATGCATGATTGATTCACACGATTACTATCGTACGACTAGCGTGTATGTTATGTAATCATAATGTTCCTAAAACTCAGGACGTTTTAGCTGCGAATTTAGGTTTTTTCCTTCCAAGATGACTCTGGTTGCGATTGCAAATCGTTATGAAATATTGTTGTAGAAGTACATTGATTTTTGAATCTTAAAACTATAGATTTTGTATTTTTCGAAATGCCTAAGGTATTTGCTTCCTGCCTTCATCGTCTTTGAACCTTAATTAGTATCTTAATAAGTTTTGTCTGCCATGCGTCTTGGATAAACTTAGAAAGGAAGTATTGTACCGGACAGCAATGACAAACTAGATGATGAACTGCCTGTGGACTGTTAGCATTTCCTCTACTTTGCCATCTCATAGTGTGCATGAACATTCGATCGTACTTGCATGAAGCACATTTGTTGCTTAGAATAAGAGCAGGGAAAAGCTCATTGAGAACGAGTTGGGCAGATTCCCTCTTATTTTGTTGTAAACCCAGAAGGCATATATCGAGAACTTTAAGTGTTTGTAATTTTTGTCTCATTTGGGTTATGGATAGTGATGGAGGCTTAAGTGTGAAGATATTAAAGCAGAGGGGTATCTATGAAAGGAGTGTTCAGTTTGCTAACAAACATTGGAACTGAAAAGTTGTAAGTGAGAAACTTTGGAACCATTGTGTAGGAACCGGATGCATGTTTGGATTGTACTAGGACTGAGGGATGTTATTGTAGATATGTGTGAATGAGATTAATAGTAGTATAATATGCATTTGAATTCCCATTAGGCAACCCAAAAGAAGAGCATTAGAATGATAAGTCAGAGAATAAACAATTAGGACTTTGGATGCTGTATTTTGGAATGGCATAGCAATACAACTGTGAAACCCGATCCTACAGAATCATGCTTGCTAATCAAATGCTCCTTTAGATTATCTAGTTTCTTTGTAAAAAAAAAAGAAAAATATATTGAGCAGGAGAGAGTTCCTTGGGTTGAATTTAGCATCTCTTTTTATGCTTTCCTTAAAGTATTTCAGTTCACAGTTTGCGTCCATATTTTGGGACTATCAGTTTCACTTAATTTGTCAAGGTTATGATTGCTGATTGATATTCCTCACCTAAGATCTGCTTGCTTTCCTTCTTTAGTGACATTCATGAAATTATGTCCATGAAAGTGATTACTGGTCTTATTATAAAATAAATGTACATTCAATACAGTGATTAAACCCATGGAAGTCAATCTATGATGTTCTCGTTGATTCTTGCTAGGGTAGAAATTTGTCCCTTTGTTTTTAATACCACGACACCCCCATCTTTTCAAGAAGAATATTGTCAAAAGCATACAATGGCAGTTAATTTATACCCTAATTTCTTTTTTTGCCAATGGATTTTCAGGTAATGACAAAGTACGTAGGTGACGGCTGGCGTTTACGTTTAGTGCAACCTGTTTTCATTGAGGAATACTGAGCTATATTAGGTCTCCTTTAGAACTTTTAAATCCGCGTGCGTAAATTGAGTAAACACCAGGATATATGGAAATTTTCCTGTCATATTGATGAACTCACTTTCTATTTATATTTCAATGTTATAACATGTTATTTTTATCAAATGTTCCTTCTGGAAATCTGTTCTTCGACAAGTGTCTGTATTCATGTTTATTGCATACCGCCAAATGATACGAATCCCGTATAGAAGGAGGATGATCGATCAAGGAATTATTGAAAGCTGAGTTCTCTTAAAATGAACTCGCCATTGTCATCTTAGCATCAAGATGGAGAGCTCTAAATTGGTTCTATATATAAAAAAAAAGATTGTATGACATGTTTTTGTAATTCACAAATTGTTAGGATTTTAAAAAATGTGTAATAATAAGGATTAAAATATCCTTTGGATGCAATAAAATTCAGTTTGATCAACCCTATAACAAGGAAAACAAGGATTAAAAAGCTCATTTTTGTAACCAACGATTCAAATGTATACCTTTTTGCAACACCG

mRNA sequence

ATGGATGCCGTAGATTCAGTCGTTGATCCTCTCAGAGAGTTCGCCAAGGATAGCGTTCGCCTCGTTAAGAGATGTCATAAACCCGATCGCAAGGAATTCACCAAGGTTGCCGTTCGTACCGCTATCGGCTTCGTTGTGATGGGATTTGTAGGGTTCTTTGTCAAGCTAATCTTCATTCCGATCAACAATATCATCGTCGGATCTGGTTAG

Coding sequence (CDS)

ATGGATGCCGTAGATTCAGTCGTTGATCCTCTCAGAGAGTTCGCCAAGGATAGCGTTCGCCTCGTTAAGAGATGTCATAAACCCGATCGCAAGGAATTCACCAAGGTTGCCGTTCGTACCGCTATCGGCTTCGTTGTGATGGGATTTGTAGGGTTCTTTGTCAAGCTAATCTTCATTCCGATCAACAATATCATCGTCGGATCTGGTTAG

Protein sequence

MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Homology
[Close]
BLAST of CsaV3_1G009720 vs. NCBI nr
Match: XP_008439824.1 (PREDICTED: protein transport protein Sec61 subunit gamma [Cucumis melo] >XP_011652190.1 PREDICTED: protein transport protein Sec61 subunit gamma [Cucumis sativus] >XP_022955226.1 protein transport protein Sec61 subunit gamma [Cucurbita moschata] >XP_022924215.1 protein transport protein Sec61 subunit gamma isoform X1 [Cucurbita moschata] >XP_022994502.1 protein transport protein Sec61 subunit gamma [Cucurbita maxima] >XP_023000906.1 protein transport protein Sec61 subunit gamma isoform X2 [Cucurbita maxima] >XP_023542809.1 protein transport protein Sec61 subunit gamma [Cucurbita pepo subsp. pepo] >XP_023519526.1 protein transport protein Sec61 subunit gamma [Cucurbita pepo subsp. pepo])

HSP 1 Score: 136.3 bits (342), Expect = 3.9e-29
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0 

Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]
BLAST of CsaV3_1G009720 vs. NCBI nr
Match: XP_022137358.1 (uncharacterized protein LOC111008832 isoform X2 [Momordica charantia])

HSP 1 Score: 136.3 bits (342), Expect = 3.9e-29
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0 

Query: 1   MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
           MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 224 MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 283

Query: 61  INNIIVGSG 70
           INNIIVGSG
Sbjct: 284 INNIIVGSG 292

[Close]
BLAST of CsaV3_1G009720 vs. NCBI nr
Match: XP_022137357.1 (uncharacterized protein LOC111008832 isoform X1 [Momordica charantia])

HSP 1 Score: 136.3 bits (342), Expect = 3.9e-29
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0 

Query: 1   MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
           MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 227 MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 286

Query: 61  INNIIVGSG 70
           INNIIVGSG
Sbjct: 287 INNIIVGSG 295

[Close]
BLAST of CsaV3_1G009720 vs. NCBI nr
Match: XP_020163946.1 (protein transport protein Sec61 subunit gamma-like [Aegilops tauschii subsp. tauschii])

HSP 1 Score: 136.0 bits (341), Expect = 5.1e-29
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 0 

Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVA+RTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAIRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]
BLAST of CsaV3_1G009720 vs. NCBI nr
Match: XP_019703602.1 (PREDICTED: protein transport protein Sec61 subunit gamma [Elaeis guineensis])

HSP 1 Score: 135.2 bits (339), Expect = 8.6e-29
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 0 

Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDA+DSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDALDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]
BLAST of CsaV3_1G009720 vs. TAIR10
Match: AT4G24920.1 (secE/sec61-gamma protein transport protein)

HSP 1 Score: 130.6 bits (327), Expect = 3.9e-31
Identity = 64/68 (94.12%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDA+DSVVDPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGS 69
          INNIIVG+
Sbjct: 61 INNIIVGA 68

[Close]
BLAST of CsaV3_1G009720 vs. TAIR10
Match: AT5G50460.1 (secE/sec61-gamma protein transport protein)

HSP 1 Score: 130.6 bits (327), Expect = 3.9e-31
Identity = 64/68 (94.12%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDA+DSVVDPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGS 69
          INNIIVG+
Sbjct: 61 INNIIVGA 68

[Close]
BLAST of CsaV3_1G009720 vs. TAIR10
Match: AT3G48570.1 (secE/sec61-gamma protein transport protein)

HSP 1 Score: 124.4 bits (311), Expect = 2.8e-29
Identity = 60/68 (88.24%), Postives = 66/68 (97.06%), Query Frame = 0 

Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          M+A+DS +DPLR+FAK SVRLV+RCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKL+FIP
Sbjct: 1  MEAIDSAIDPLRDFAKSSVRLVQRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLVFIP 60

Query: 61 INNIIVGS 69
          INNIIVGS
Sbjct: 61 INNIIVGS 68

[Close]
BLAST of CsaV3_1G009720 vs. Swiss-Prot
Match: sp|P38385|SC61G_ORYSJ (Protein transport protein Sec61 subunit gamma OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0178400 PE=3 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 3.7e-31
Identity = 68/69 (98.55%), Postives = 68/69 (98.55%), Query Frame = 0 

Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVA RTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAARTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]
BLAST of CsaV3_1G009720 vs. Swiss-Prot
Match: sp|P0DI74|S61G1_ARATH (Protein transport protein Sec61 subunit gamma-1 OS=Arabidopsis thaliana OX=3702 GN=SEC61G1 PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 6.9e-30
Identity = 64/68 (94.12%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDA+DSVVDPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGS 69
          INNIIVG+
Sbjct: 61 INNIIVGA 68

[Close]
BLAST of CsaV3_1G009720 vs. Swiss-Prot
Match: sp|P0DI75|S61G2_ARATH (Protein transport protein Sec61 subunit gamma-2 OS=Arabidopsis thaliana OX=3702 GN=SEC61G2 PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 6.9e-30
Identity = 64/68 (94.12%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDA+DSVVDPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGS 69
          INNIIVG+
Sbjct: 61 INNIIVGA 68

[Close]
BLAST of CsaV3_1G009720 vs. Swiss-Prot
Match: sp|Q9SMP2|S61G3_ARATH (Protein transport protein Sec61 subunit gamma-3 OS=Arabidopsis thaliana OX=3702 GN=SEC61G3 PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 5.0e-28
Identity = 60/68 (88.24%), Postives = 66/68 (97.06%), Query Frame = 0 

Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          M+A+DS +DPLR+FAK SVRLV+RCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKL+FIP
Sbjct: 1  MEAIDSAIDPLRDFAKSSVRLVQRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLVFIP 60

Query: 61 INNIIVGS 69
          INNIIVGS
Sbjct: 61 INNIIVGS 68

[Close]
BLAST of CsaV3_1G009720 vs. Swiss-Prot
Match: sp|Q7Z1B8|S61G1_GRYOR (Protein transport protein Sec61 subunit gamma OS=Gryllotalpa orientalis OX=213494 GN=SEC61G PE=3 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 4.1e-22
Identity = 51/68 (75.00%), Postives = 58/68 (85.29%), Query Frame = 0 

Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MD V   ++P R+FAKDS+RLVKRC KPDRKEF K+AV TAIGF +MGF+GFFVKLI IP
Sbjct: 1  MDQVTKFIEPGRQFAKDSIRLVKRCTKPDRKEFQKIAVATAIGFCIMGFIGFFVKLIHIP 60

Query: 61 INNIIVGS 69
          INNIIVGS
Sbjct: 61 INNIIVGS 68

[Close]
BLAST of CsaV3_1G009720 vs. TrEMBL
Match: tr|A0A1S3B0A7|A0A1S3B0A7_CUCME (protein transport protein Sec61 subunit gamma OS=Cucumis melo OX=3656 GN=LOC103484504 PE=3 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.6e-29
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0 

Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]
BLAST of CsaV3_1G009720 vs. TrEMBL
Match: tr|M8CC86|M8CC86_AEGTA (Protein transport protein Sec61 subunit gamma OS=Aegilops tauschii OX=37682 GN=F775_31470 PE=3 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 3.3e-29
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 0 

Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVA+RTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAIRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]
BLAST of CsaV3_1G009720 vs. TrEMBL
Match: tr|A0A1D6AYG3|A0A1D6AYG3_WHEAT (Uncharacterized protein OS=Triticum aestivum OX=4565 PE=3 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 3.3e-29
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 0 

Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVA+RTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAIRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]
BLAST of CsaV3_1G009720 vs. TrEMBL
Match: tr|A0A287TRG3|A0A287TRG3_HORVV (Uncharacterized protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=3 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 3.3e-29
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 0 

Query: 1   MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
           MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVA+RTAIGFVVMGFVGFFVKLIFIP
Sbjct: 32  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAIRTAIGFVVMGFVGFFVKLIFIP 91

Query: 61  INNIIVGSG 70
           INNIIVGSG
Sbjct: 92  INNIIVGSG 100

[Close]
BLAST of CsaV3_1G009720 vs. TrEMBL
Match: tr|M7Y9U8|M7Y9U8_TRIUA (Protein transport protein Sec61 subunit gamma OS=Triticum urartu OX=4572 GN=TRIUR3_04207 PE=3 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 7.4e-29
Identity = 68/69 (98.55%), Postives = 68/69 (98.55%), Query Frame = 0 

Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVA RTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAARTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

The following BLAST results are available for this feature:
BLAST of CsaV3_1G009720 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008439824.13.9e-29100.00PREDICTED: protein transport protein Sec61 subunit gamma [Cucumis melo] >XP_0116... [more]
XP_022137358.13.9e-29100.00uncharacterized protein LOC111008832 isoform X2 [Momordica charantia][more]
XP_022137357.13.9e-29100.00uncharacterized protein LOC111008832 isoform X1 [Momordica charantia][more]
XP_020163946.15.1e-2998.55protein transport protein Sec61 subunit gamma-like [Aegilops tauschii subsp. tau... [more]
XP_019703602.18.6e-2998.55PREDICTED: protein transport protein Sec61 subunit gamma [Elaeis guineensis][more]
BLAST of CsaV3_1G009720 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G24920.13.9e-3194.12secE/sec61-gamma protein transport protein[more]
AT5G50460.13.9e-3194.12secE/sec61-gamma protein transport protein[more]
AT3G48570.12.8e-2988.24secE/sec61-gamma protein transport protein[more]
BLAST of CsaV3_1G009720 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P38385|SC61G_ORYSJ3.7e-3198.55Protein transport protein Sec61 subunit gamma OS=Oryza sativa subsp. japonica OX... [more]
sp|P0DI74|S61G1_ARATH6.9e-3094.12Protein transport protein Sec61 subunit gamma-1 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|P0DI75|S61G2_ARATH6.9e-3094.12Protein transport protein Sec61 subunit gamma-2 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|Q9SMP2|S61G3_ARATH5.0e-2888.24Protein transport protein Sec61 subunit gamma-3 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|Q7Z1B8|S61G1_GRYOR4.1e-2275.00Protein transport protein Sec61 subunit gamma OS=Gryllotalpa orientalis OX=21349... [more]
BLAST of CsaV3_1G009720 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3B0A7|A0A1S3B0A7_CUCME2.6e-29100.00protein transport protein Sec61 subunit gamma OS=Cucumis melo OX=3656 GN=LOC1034... [more]
tr|M8CC86|M8CC86_AEGTA3.3e-2998.55Protein transport protein Sec61 subunit gamma OS=Aegilops tauschii OX=37682 GN=F... [more]
tr|A0A1D6AYG3|A0A1D6AYG3_WHEAT3.3e-2998.55Uncharacterized protein OS=Triticum aestivum OX=4565 PE=3 SV=1[more]
tr|A0A287TRG3|A0A287TRG3_HORVV3.3e-2998.55Uncharacterized protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=3 SV=1[more]
tr|M7Y9U8|M7Y9U8_TRIUA7.4e-2998.55Protein transport protein Sec61 subunit gamma OS=Triticum urartu OX=4572 GN=TRIU... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006605protein targeting
GO:0006886intracellular protein transport
GO:0015031protein transport
Vocabulary: Molecular Function
TermDefinition
GO:0015450P-P-bond-hydrolysis-driven protein transmembrane transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR022943SecE
IPR023391Prot_translocase_SecE_dom_sf
IPR001901Translocase_SecE/Sec61-g
IPR008158Translocase_Sec61-g
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006605 protein targeting
biological_process GO:0071806 protein transmembrane transport
biological_process GO:0015031 protein transport
biological_process GO:0006886 intracellular protein transport
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0016020 membrane
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
cellular_component GO:0005622 intracellular
molecular_function GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G009720.1CsaV3_1G009720.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008158Protein translocase SEC61 complex, gamma subunitTIGRFAMTIGR00327TIGR00327coord: 8..66
e-value: 9.2E-17
score: 58.6
IPR001901Protein translocase complex, SecE/Sec61-gamma subunitPFAMPF00584SecEcoord: 13..65
e-value: 1.1E-13
score: 50.8
IPR001901Protein translocase complex, SecE/Sec61-gamma subunitPROSITEPS01067SECE_SEC61Gcoord: 14..42
IPR023391Protein translocase SecE domain superfamilyGENE3DG3DSA:1.20.5.820coord: 7..68
e-value: 3.7E-34
score: 118.1
IPR023391Protein translocase SecE domain superfamilySUPERFAMILYSSF103456Preprotein translocase SecE subunitcoord: 5..65
NoneNo IPR availablePANTHERPTHR12309SEC61 GAMMA SUBUNITcoord: 1..69
NoneNo IPR availablePANTHERPTHR12309:SF19SUBFAMILY NOT NAMEDcoord: 1..69
IPR022943Preprotein translocase subunit SecEHAMAPMF_00422SecEcoord: 9..64
score: 12.907

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_1G009720CSPI01G09610Wild cucumber (PI 183967)cpicucB001
CsaV3_1G009720Cucsa.157310Cucumber (Gy14) v1cgycucB237
CsaV3_1G009720CmaCh18G003140Cucurbita maxima (Rimu)cmacucB0474
CsaV3_1G009720CmaCh13G008110Cucurbita maxima (Rimu)cmacucB0235
CsaV3_1G009720CmoCh18G002220Cucurbita moschata (Rifu)cmocucB0457
CsaV3_1G009720CmoCh13G008410Cucurbita moschata (Rifu)cmocucB0222
CsaV3_1G009720Cp4.1LG09g09600Cucurbita pepo (Zucchini)cpecucB0031
CsaV3_1G009720Cp4.1LG20g03020Cucurbita pepo (Zucchini)cpecucB0634
CsaV3_1G009720CsGy1G009660Cucumber (Gy14) v2cgybcucB002
CsaV3_1G009720Carg07607Silver-seed gourdcarcucB1046
CsaV3_1G009720Carg06800Silver-seed gourdcarcucB0529
CsaV3_1G009720Cla019278Watermelon (97103) v1cucwmB098
CsaV3_1G009720Cla002625Watermelon (97103) v1cucwmB013
CsaV3_1G009720MELO3C002366Melon (DHL92) v3.5.1cucmeB024
CsaV3_1G009720ClCG03G003820Watermelon (Charleston Gray)cucwcgB038
CsaV3_1G009720ClCG06G017920Watermelon (Charleston Gray)cucwcgB080
CsaV3_1G009720Lsi02G005100Bottle gourd (USVL1VR-Ls)cuclsiB022
CsaV3_1G009720Lsi06G016440Bottle gourd (USVL1VR-Ls)cuclsiB077
CsaV3_1G009720MELO3C002366.2Melon (DHL92) v3.6.1cucmedB022
CsaV3_1G009720Cla97C03G054950Watermelon (97103) v2cucwmbB030
CsaV3_1G009720Cla97C06G127660Watermelon (97103) v2cucwmbB071
CsaV3_1G009720Bhi08G001233Wax gourdcucwgoB035
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CsaV3_1G009720CsaV3_1G000530Cucumber (Chinese Long) v3cuccucB003
The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_1G009720Silver-seed gourdcarcucB0397
CsaV3_1G009720Cucumber (Gy14) v2cgybcucB011
CsaV3_1G009720Cucumber (Gy14) v1cgycucB592
CsaV3_1G009720Cucurbita maxima (Rimu)cmacucB0078
CsaV3_1G009720Cucurbita maxima (Rimu)cmacucB0124
CsaV3_1G009720Cucurbita moschata (Rifu)cmocucB0066
CsaV3_1G009720Cucurbita moschata (Rifu)cmocucB0110
CsaV3_1G009720Cucurbita pepo (Zucchini)cpecucB0439
CsaV3_1G009720Cucurbita pepo (Zucchini)cpecucB0808
CsaV3_1G009720Wild cucumber (PI 183967)cpicucB015
CsaV3_1G009720Melon (DHL92) v3.5.1cucmeB051
CsaV3_1G009720Melon (DHL92) v3.6.1cucmedB048