Cp4.1LG09g09600 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG09g09600
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionProtein transport protein Sec61 subunit gamma
LocationCp4.1LG09 : 8563124 .. 8566128 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TACCGTACTTTAGCCCCAAAGAAGCCCACCGTAGCCGATGATTCAAGGGTATTTTCGGGAATTCAAATATTGCGACAGTCCATCAATTTTGACCCAATGAATCCCTAATCTTGCAGCGCGCGCCTCAAAGTATTTAATCCTCCACGCGGCCATAACCCCATCAAACGCGAAACCAAATTTCGGTGAACATTTCGATTGTTGTTCTGTTGACGTTCCCTTCGCAACGAGGAGTAATGGATGCCGTAGATTCTGTCGTTGATCCTCTCAGAGAGTTCGCCAAGGACAGCGTTCGTCTCGTTAAGAGATGTCATAAACCCGATCGGAAAGGTATGTTTCTTTCTTTGATATTGTATTGCATGGATCTGAATTCATCGAGGTCATAGATTTTGTTTTTTTGTTTCAATTTTACTTATTCAACGTTGTGGTGGTGTAGAATTCACTAAGGTTGCCGTCCGTACCGCCATCGGTTTCGTTGTGATGGGATTCGTAGGCTTCTTTGTGAAGCTAATCTTTATTCCGATCAACAACATCATCGTCGGATCTGGTTAGATTAGGTATGCATCCAATTTAATAGATCTATGTTTTTCCGTTTTCGATCTGGCTTGTATTTGTTCTCCATTGTGCTCGTACTGTCGACGTTGTTTGCTATTATCGGACGGATCGGCGAAAGAAGGTTGCTTCGTGAAATTTTTGGTTGATGAGCGTTACGATGAGATTATTCCTTCTTAAATTTTTGTTTGATCCACGCGCATGCAATGTTTATCGATTCTTATGAAATATCTTCGTGCATGACGGATCCAAACGATTGAAGATCGCACGACTCACATTGATGCCTTTTATATCTTATTGCTCCTAATGTTCAAGACGTTCTAGCTCTGGATTTGCGTTTGTTTCCCTTAGATTACTTTGGTTGCCATTGAGAATCGCTAGGAAACTTTATAGAAGCAGCATTCTGTTAGCTAACTCCTAGGCTTCTATCCCTGTTGGAATGAATCTTTCTTAGTGCCGTCCTTCAGATGATGTGGTTTCAATGTTTTAAATCTAGTTTGTTCCCTTATCTTCTTTGTATATTAAACTATTGACTTTGTAATTTTCTAACTTTCCTTGGTAGTTTGCTTCTTAACTTCCACTTCTTTGAAACTTTATGAACATCATAATTAGCGTATTGTCTGATATGGTTCTCGGAGAAACTTTGGAAAGGAATTATGTACCGGATAGCGGTGAGGTATCTATATTTTGAACTGGTTGTGGATGTTAGCATTTCATCTACTGCCCATCTCACTGCGTGCATGCACATTTATTCTTAGTCATTTGAAAAACATTTATTCTTAGTCATTTGAAAAACATTTGTTGATTAGAGGTGACAGCAGGCAAGCCAATATGGAAGGAGCAATTGCCCCTCTTAGTTTTTGTTAAAAGATTATATGTAAAGAACGTTAGGATGTAAAAATTTGCCCCTCTTAAGTAAGTTTTTCCAGCTCCGCCCATGTGAGGTGTACCATTTTTTTCCAGCTTCATTTCCTCTCTCATTCACCCCTTTATTCTTTTCATTTTTTACCCGTTCTTCATCTTCCACTGAAAGAATGAACAAGGTTTTTACTGTTTGTAGATACCTTCTGTAGCAACATGTCGCTAGAATCTAGCCATTCTATTGGTGTAGATAGTTTTTGAATGTTGGATCAAAATGACGTGGAGATGGAAAGTGGTGGAGGCTATAAGTGTAAGATATTGAAGCAGGGAGTATCTGTTAAAGTAGTGTTTAGTTTGCTAACAAACACCGAAACCAAAAGGTTGGAAGTGAGAAACTCCGGAAGTAGTGTGCAGGAATTGGAAGCCTGTGTTTGGAATTTACGAAACTGAAGGATTTAGTGGTGTAGTTATGTGAGAAAGAGATCAATATTAGTATACTATGCATTAAAATAAACAACCGTGGATTGATCTAGTTGTCTATAAGAGTCATGTATCTAAGTCGACTTAGAGAGGAATGATTTTTACCTTGGTAACTAAATGTAGTGGGCTTAGACAGGAACAATGAATAGTCAAGGTGTGCCCAAGCTTGCTGACCCAGAGACCTGCTCCTACAGACTCTTGCTTGATCAAATGCTCCTTTTGAGTAAATAGTTCCTTTAAAAAAGATCGAGTTAGCGAGTGTTCGTTCTGGAAATTAAGAACCTCTCTTTTTACTTAAAGCACTTCTTTCTAGTCCGTAGTGATAATTATAAAGGTGTAGCTTGCATGTTTACTGCATTATTTTGGGACCTTCAATTCCTCTTAATTTGTTCAAGTTGTGATTGTTTATTGATGTTCCGCACATTAGATCTGCTTGTCTTCCCTCCTTCAGCATCATTCATGAAAATTTGTTTTGGTGTTCTTATATGCCTTCAAGGGTAGAACAACCCCATCATTTCTTTTTCCCTTTCAGCCCCTGCACCGTTTCAATAAGTCAAATCGTGTTGAATGTTATCAAAAGCTTATGTCGTCGGTTAATTAGACCCTAATTTTGTTTTGCCAATGGATTTTCAGGTCACGATGAAGTACGTAGGTGATGGCGTCTAGCGGCTGGCAGTCACGGTTTAGTACAATCTGTGTTCATTGAGGAATACTTAGCATTAGCTCTCCTTTCGAACTTTAAATCTGCGTCGTAAATTTGAGTGAACCTTAGGATATGTGGAAACTTTTCTTTTCATATTAAAGAGCTTTATTTATATCTCAATGTTATAACATGTTCTTTTTCTCTACTTGGGTATGAAATTTCTAAACAATACTTAGCCTGTAGCAGAAATCTTCAACAATTTAATGGTGGTGTGGATAACAAATTTATGCATATGGATATGCAGCTGGGTATTGTTCTTTACAATATATCATCATTGTGGTTCAGGACGAGCATTATCATTGTGGTTCAAAATTATCGTCCTGATTACCAGCTTGATATTCATCACAATCCTAATGCAAACTATCCCCTTTTGCACTACCATCCTATTGAAGTAAAAGAACCATTTCTCAAC

mRNA sequence

TACCGTACTTTAGCCCCAAAGAAGCCCACCGTAGCCGATGATTCAAGGGTATTTTCGGGAATTCAAATATTGCGACAGTCCATCAATTTTGACCCAATGAATCCCTAATCTTGCAGCGCGCGCCTCAAAGTATTTAATCCTCCACGCGGCCATAACCCCATCAAACGCGAAACCAAATTTCGGTGAACATTTCGATTGTTGTTCTGTTGACGTTCCCTTCGCAACGAGGAGTAATGGATGCCGTAGATTCTGTCGTTGATCCTCTCAGAGAGTTCGCCAAGGACAGCGTTCGTCTCGTTAAGAGATGTCATAAACCCGATCGGAAAGAATTCACTAAGGTTGCCGTCCGTACCGCCATCGGTTTCGTTGTGATGGGATTCGTAGGCTTCTTTGTGAAGCTAATCTTTATTCCGATCAACAACATCATCGTCGGATCTGGTTAGATTAGGTCACGATGAAGTACGTAGGTGATGGCGTCTAGCGGCTGGCAGTCACGGTTTAGTACAATCTGTGTTCATTGAGGAATACTTAGCATTAGCTCTCCTTTCGAACTTTAAATCTGCGTCGTAAATTTGAGTGAACCTTAGGATATGTGGAAACTTTTCTTTTCATATTAAAGAGCTTTATTTATATCTCAATGTTATAACATGTTCTTTTTCTCTACTTGGGTATGAAATTTCTAAACAATACTTAGCCTGTAGCAGAAATCTTCAACAATTTAATGGTGGTGTGGATAACAAATTTATGCATATGGATATGCAGCTGGGTATTGTTCTTTACAATATATCATCATTGTGGTTCAGGACGAGCATTATCATTGTGGTTCAAAATTATCGTCCTGATTACCAGCTTGATATTCATCACAATCCTAATGCAAACTATCCCCTTTTGCACTACCATCCTATTGAAGTAAAAGAACCATTTCTCAAC

Coding sequence (CDS)

ATGGATGCCGTAGATTCTGTCGTTGATCCTCTCAGAGAGTTCGCCAAGGACAGCGTTCGTCTCGTTAAGAGATGTCATAAACCCGATCGGAAAGAATTCACTAAGGTTGCCGTCCGTACCGCCATCGGTTTCGTTGTGATGGGATTCGTAGGCTTCTTTGTGAAGCTAATCTTTATTCCGATCAACAACATCATCGTCGGATCTGGTTAG

Protein sequence

MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Homology
[Close]
BLAST of Cp4.1LG09g09600 vs. Swiss-Prot
Match: SC61G_ORYSJ (Protein transport protein Sec61 subunit gamma OS=Oryza sativa subsp. japonica GN=Os02g0178400 PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 8.0e-31
Identity = 68/69 (98.55%), Postives = 68/69 (98.55%), Query Frame = 1 

Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVA RTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAARTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]
BLAST of Cp4.1LG09g09600 vs. Swiss-Prot
Match: S61G1_ARATH (Protein transport protein Sec61 subunit gamma-1 OS=Arabidopsis thaliana GN=SEC61G1 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.1e-29
Identity = 64/68 (94.12%), Postives = 68/68 (100.00%), Query Frame = 1 

Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDA+DSVVDPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGS 69
          INNIIVG+
Sbjct: 61 INNIIVGA 68

[Close]
BLAST of Cp4.1LG09g09600 vs. Swiss-Prot
Match: S61G2_ARATH (Protein transport protein Sec61 subunit gamma-2 OS=Arabidopsis thaliana GN=SEC61G2 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.1e-29
Identity = 64/68 (94.12%), Postives = 68/68 (100.00%), Query Frame = 1 

Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDA+DSVVDPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGS 69
          INNIIVG+
Sbjct: 61 INNIIVGA 68

[Close]
BLAST of Cp4.1LG09g09600 vs. Swiss-Prot
Match: S61G3_ARATH (Protein transport protein Sec61 subunit gamma-3 OS=Arabidopsis thaliana GN=SEC61G3 PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 8.2e-28
Identity = 60/68 (88.24%), Postives = 66/68 (97.06%), Query Frame = 1 

Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          M+A+DS +DPLR+FAK SVRLV+RCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKL+FIP
Sbjct: 1  MEAIDSAIDPLRDFAKSSVRLVQRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLVFIP 60

Query: 61 INNIIVGS 69
          INNIIVGS
Sbjct: 61 INNIIVGS 68

[Close]
BLAST of Cp4.1LG09g09600 vs. Swiss-Prot
Match: S61G1_GRYOR (Protein transport protein Sec61 subunit gamma OS=Gryllotalpa orientalis GN=SEC61G PE=3 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 6.8e-22
Identity = 51/68 (75.00%), Postives = 58/68 (85.29%), Query Frame = 1 

Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MD V   ++P R+FAKDS+RLVKRC KPDRKEF K+AV TAIGF +MGF+GFFVKLI IP
Sbjct: 1  MDQVTKFIEPGRQFAKDSIRLVKRCTKPDRKEFQKIAVATAIGFCIMGFIGFFVKLIHIP 60

Query: 61 INNIIVGS 69
          INNIIVGS
Sbjct: 61 INNIIVGS 68

[Close]
BLAST of Cp4.1LG09g09600 vs. TrEMBL
Match: W5H5A3_WHEAT (Uncharacterized protein OS=Triticum aestivum PE=3 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 4.0e-29
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1 

Query: 1   MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
           MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVA+RTAIGFVVMGFVGFFVKLIFIP
Sbjct: 73  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAIRTAIGFVVMGFVGFFVKLIFIP 132

Query: 61  INNIIVGSG 70
           INNIIVGSG
Sbjct: 133 INNIIVGSG 141

[Close]
BLAST of Cp4.1LG09g09600 vs. TrEMBL
Match: M0VP35_HORVD (Uncharacterized protein OS=Hordeum vulgare var. distichum PE=3 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 4.0e-29
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1 

Query: 1   MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
           MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVA+RTAIGFVVMGFVGFFVKLIFIP
Sbjct: 68  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAIRTAIGFVVMGFVGFFVKLIFIP 127

Query: 61  INNIIVGSG 70
           INNIIVGSG
Sbjct: 128 INNIIVGSG 136

[Close]
BLAST of Cp4.1LG09g09600 vs. TrEMBL
Match: M8CC86_AEGTA (Protein transport protein Sec61 subunit gamma OS=Aegilops tauschii GN=F775_31470 PE=3 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 4.0e-29
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1 

Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVA+RTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAIRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]
BLAST of Cp4.1LG09g09600 vs. TrEMBL
Match: A0A0E0G2G7_ORYNI (Uncharacterized protein OS=Oryza nivara PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 8.9e-29
Identity = 68/69 (98.55%), Postives = 68/69 (98.55%), Query Frame = 1 

Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVA RTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAARTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]
BLAST of Cp4.1LG09g09600 vs. TrEMBL
Match: M7Y9U8_TRIUA (Protein transport protein Sec61 subunit gamma OS=Triticum urartu GN=TRIUR3_04207 PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 8.9e-29
Identity = 68/69 (98.55%), Postives = 68/69 (98.55%), Query Frame = 1 

Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVA RTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAARTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]
BLAST of Cp4.1LG09g09600 vs. TAIR10
Match: AT4G24920.1 (AT4G24920.1 secE/sec61-gamma protein transport protein)

HSP 1 Score: 129.8 bits (325), Expect = 6.5e-31
Identity = 64/68 (94.12%), Postives = 68/68 (100.00%), Query Frame = 1 

Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDA+DSVVDPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGS 69
          INNIIVG+
Sbjct: 61 INNIIVGA 68

[Close]
BLAST of Cp4.1LG09g09600 vs. TAIR10
Match: AT5G50460.1 (AT5G50460.1 secE/sec61-gamma protein transport protein)

HSP 1 Score: 129.8 bits (325), Expect = 6.5e-31
Identity = 64/68 (94.12%), Postives = 68/68 (100.00%), Query Frame = 1 

Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDA+DSVVDPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGS 69
          INNIIVG+
Sbjct: 61 INNIIVGA 68

[Close]
BLAST of Cp4.1LG09g09600 vs. TAIR10
Match: AT3G48570.1 (AT3G48570.1 secE/sec61-gamma protein transport protein)

HSP 1 Score: 123.6 bits (309), Expect = 4.6e-29
Identity = 60/68 (88.24%), Postives = 66/68 (97.06%), Query Frame = 1 

Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          M+A+DS +DPLR+FAK SVRLV+RCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKL+FIP
Sbjct: 1  MEAIDSAIDPLRDFAKSSVRLVQRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLVFIP 60

Query: 61 INNIIVGS 69
          INNIIVGS
Sbjct: 61 INNIIVGS 68

[Close]
BLAST of Cp4.1LG09g09600 vs. NCBI nr
Match: gi|659067519|ref|XP_008439824.1| (PREDICTED: protein transport protein Sec61 subunit gamma [Cucumis melo])

HSP 1 Score: 135.2 bits (339), Expect = 4.4e-29
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 1 

Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]
BLAST of Cp4.1LG09g09600 vs. NCBI nr
Match: gi|475622103|gb|EMT31743.1| (Protein transport protein Sec61 subunit gamma [Aegilops tauschii])

HSP 1 Score: 134.8 bits (338), Expect = 5.7e-29
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1 

Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVA+RTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAIRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]
BLAST of Cp4.1LG09g09600 vs. NCBI nr
Match: gi|357123352|ref|XP_003563375.1| (PREDICTED: protein transport protein Sec61 subunit gamma [Brachypodium distachyon])

HSP 1 Score: 133.7 bits (335), Expect = 1.3e-28
Identity = 68/69 (98.55%), Postives = 68/69 (98.55%), Query Frame = 1 

Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVA RTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAARTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]
BLAST of Cp4.1LG09g09600 vs. NCBI nr
Match: gi|695069213|ref|XP_009381577.1| (PREDICTED: protein transport protein Sec61 subunit gamma [Musa acuminata subsp. malaccensis])

HSP 1 Score: 133.7 bits (335), Expect = 1.3e-28
Identity = 67/69 (97.10%), Postives = 69/69 (100.00%), Query Frame = 1 

Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDA+DSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVA+RTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDALDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAIRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]
BLAST of Cp4.1LG09g09600 vs. NCBI nr
Match: gi|242060722|ref|XP_002451650.1| (hypothetical protein SORBIDRAFT_04g005280 [Sorghum bicolor])

HSP 1 Score: 133.3 bits (334), Expect = 1.7e-28
Identity = 67/69 (97.10%), Postives = 68/69 (98.55%), Query Frame = 1 

Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAVDSVVDPLREFAKDS+RLVKRCHKPDRKEFTKVA RTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAVDSVVDPLREFAKDSIRLVKRCHKPDRKEFTKVAARTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

The following BLAST results are available for this feature:
BLAST of Cp4.1LG09g09600 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SC61G_ORYSJ8.0e-3198.55Protein transport protein Sec61 subunit gamma OS=Oryza sativa subsp. japonica GN... [more]
S61G1_ARATH1.1e-2994.12Protein transport protein Sec61 subunit gamma-1 OS=Arabidopsis thaliana GN=SEC61... [more]
S61G2_ARATH1.1e-2994.12Protein transport protein Sec61 subunit gamma-2 OS=Arabidopsis thaliana GN=SEC61... [more]
S61G3_ARATH8.2e-2888.24Protein transport protein Sec61 subunit gamma-3 OS=Arabidopsis thaliana GN=SEC61... [more]
S61G1_GRYOR6.8e-2275.00Protein transport protein Sec61 subunit gamma OS=Gryllotalpa orientalis GN=SEC61... [more]
BLAST of Cp4.1LG09g09600 vs. TrEMBL
Match NameE-valueIdentityDescription
W5H5A3_WHEAT4.0e-2998.55Uncharacterized protein OS=Triticum aestivum PE=3 SV=1[more]
M0VP35_HORVD4.0e-2998.55Uncharacterized protein OS=Hordeum vulgare var. distichum PE=3 SV=1[more]
M8CC86_AEGTA4.0e-2998.55Protein transport protein Sec61 subunit gamma OS=Aegilops tauschii GN=F775_31470... [more]
A0A0E0G2G7_ORYNI8.9e-2998.55Uncharacterized protein OS=Oryza nivara PE=3 SV=1[more]
M7Y9U8_TRIUA8.9e-2998.55Protein transport protein Sec61 subunit gamma OS=Triticum urartu GN=TRIUR3_04207... [more]
BLAST of Cp4.1LG09g09600 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G24920.16.5e-3194.12 secE/sec61-gamma protein transport protein[more]
AT5G50460.16.5e-3194.12 secE/sec61-gamma protein transport protein[more]
AT3G48570.14.6e-2988.24 secE/sec61-gamma protein transport protein[more]
BLAST of Cp4.1LG09g09600 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659067519|ref|XP_008439824.1|4.4e-29100.00PREDICTED: protein transport protein Sec61 subunit gamma [Cucumis melo][more]
gi|475622103|gb|EMT31743.1|5.7e-2998.55Protein transport protein Sec61 subunit gamma [Aegilops tauschii][more]
gi|357123352|ref|XP_003563375.1|1.3e-2898.55PREDICTED: protein transport protein Sec61 subunit gamma [Brachypodium distachyo... [more]
gi|695069213|ref|XP_009381577.1|1.3e-2897.10PREDICTED: protein transport protein Sec61 subunit gamma [Musa acuminata subsp. ... [more]
gi|242060722|ref|XP_002451650.1|1.7e-2897.10hypothetical protein SORBIDRAFT_04g005280 [Sorghum bicolor][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0015450P-P-bond-hydrolysis-driven protein transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0015031protein transport
GO:0006886intracellular protein transport
GO:0006605protein targeting
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR023391Prot_translocase_SecE_dom_sf
IPR022943SecE
IPR008158Translocase_Sec61-g
IPR001901Translocase_SecE/Sec61-g
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006605 protein targeting
biological_process GO:0071806 protein transmembrane transport
biological_process GO:0015031 protein transport
biological_process GO:0006886 intracellular protein transport
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
cellular_component GO:0016020 membrane
cellular_component GO:0005622 intracellular
molecular_function GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG09g09600.1Cp4.1LG09g09600.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001901Protein translocase complex, SecE/Sec61-gamma subunitPFAMPF00584SecEcoord: 13..65
score: 1.1
IPR001901Protein translocase complex, SecE/Sec61-gamma subunitPROSITEPS01067SECE_SEC61Gcoord: 14..42
scor
IPR008158Protein translocase SEC61 complex, gamma subunitTIGRFAMsTIGR00327TIGR00327coord: 8..66
score: 9.2
IPR022943Preprotein translocase subunit SecEHAMAPMF_00422SecEcoord: 9..64
score: 12
IPR023391Protein translocase SecE domainGENE3DG3DSA:1.20.5.820coord: 6..58
score: 2.
IPR023391Protein translocase SecE domainunknownSSF103456Preprotein translocase SecE subunitcoord: 5..65
score: 1.14
NoneNo IPR availablePANTHERPTHR12309SEC61 GAMMA SUBUNITcoord: 1..69
score: 5.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG09g09600Cucsa.157310Cucumber (Gy14) v1cgycpeB0419
Cp4.1LG09g09600CmaCh13G008110Cucurbita maxima (Rimu)cmacpeB214
Cp4.1LG09g09600CmaCh18G003140Cucurbita maxima (Rimu)cmacpeB414
Cp4.1LG09g09600CmoCh18G002220Cucurbita moschata (Rifu)cmocpeB377
Cp4.1LG09g09600CmoCh13G008410Cucurbita moschata (Rifu)cmocpeB184
Cp4.1LG09g09600Cla002625Watermelon (97103) v1cpewmB025
Cp4.1LG09g09600Cla019278Watermelon (97103) v1cpewmB061
Cp4.1LG09g09600Csa1G050560Cucumber (Chinese Long) v2cpecuB029
Cp4.1LG09g09600MELO3C002366Melon (DHL92) v3.5.1cpemeB026
Cp4.1LG09g09600ClCG03G003820Watermelon (Charleston Gray)cpewcgB036
Cp4.1LG09g09600ClCG06G017920Watermelon (Charleston Gray)cpewcgB051
Cp4.1LG09g09600CSPI01G09610Wild cucumber (PI 183967)cpecpiB025
Cp4.1LG09g09600Lsi02G005100Bottle gourd (USVL1VR-Ls)cpelsiB026
Cp4.1LG09g09600MELO3C002366.2Melon (DHL92) v3.6.1cpemedB031
Cp4.1LG09g09600CsaV3_1G009720Cucumber (Chinese Long) v3cpecucB0031
Cp4.1LG09g09600CsaV3_1G000530Cucumber (Chinese Long) v3cpecucB0029
Cp4.1LG09g09600Bhi08G001233Wax gourdcpewgoB0048
Cp4.1LG09g09600CsGy1G009660Cucumber (Gy14) v2cgybcpeB018
Cp4.1LG09g09600Carg07607Silver-seed gourdcarcpeB1396
Cp4.1LG09g09600Carg06800Silver-seed gourdcarcpeB0694
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG09g09600Cp4.1LG20g03020Cucurbita pepo (Zucchini)cpecpeB045
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG09g09600Cucurbita pepo (Zucchini)cpecpeB029
Cp4.1LG09g09600Cucumber (Gy14) v1cgycpeB1034
Cp4.1LG09g09600Cucurbita moschata (Rifu)cmocpeB045
Cp4.1LG09g09600Cucumber (Gy14) v2cgybcpeB015
Cp4.1LG09g09600Melon (DHL92) v3.6.1cpemedB041
Cp4.1LG09g09600Silver-seed gourdcarcpeB0507