CsaV3_1G009580 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G009580
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionElongation factor 1 beta
Locationchr1 : 5938320 .. 5940974 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTTAGCCTTCTATTTACTACCAATTTGTGACTGAAGTAGAGCAGAATGAATTAAATAAAACCAAAATCGAAGACATGAAATCTCCACCGTTGATTTACGAGGACCTCCATTAACGGTTCATGTGCGGTGCAGCAGATCAAGCCTATCCTGTTGCTATAAATTTTGAAGCCGAAACCCTAAATTCGATCCCTTAGCTTCTTAACAACTTTCTCTGTGAGTTCTAGCGTTGCTGCCGGCGGTAAGCTACCGATCACTCATTTTTTATTTAGTTCGTATCATTAACGTATGAAAACTATGGTTTTTTAACTTGTTGAGTTTAATTTTTGAATAGAAAGAAATCACATCAGTTCGCAATGGCGGTCTCATTTAGCGATGTCAAGTCGGCAGCTGGTCTCCAAAAGCTCGACGAGTACCTGCTCAGTCGTAGTTACATTTCTGGGTTAGTTTATCATCTGAAATCTTCGATTTGAATTTGCTATTTGATTTGGCTTCTCTTCATTGGAAGACGATTGATTTATATCAAGGGCGGAGAGAAATGTTTGTTAGTAATAGTATTAACATTTAGTGTATGGAATCTGGTCTTTATATGTTCGACGAATGTTCATTCACAGGTATCAAGCTTCGAAAGATGATATCGCTGTTTACGAAGCTCTCTCCAAGCCCGTTTCCAGCGAATATGTCAACGTATCTAGATGGTATAATCATATCGCAGCACTCGTGAGAGCCTCGTAAGTCTCCAAATTGCTTATTTTTGCTGTTTAATTCCATGGTTAGTTTTGTTCTCGCTCCTAACTCATACTAATTGGCTTTTGTTATTGTTTTATAGTGCTAGTTTTGGAGAGGGTTCTGGCGTTAAGTTCGACTCAGATGCAATCGCTACCCCACCGGCTGCCGATGCTAAGGTGAAAATATTATGCAATATTTACCCCATTTTTGAGCTGTGTGACGTTATGGTGGTTTTCCTTGTGTTTACAATTTAATATTTACTCTGAAACACTTACCAGGCTAGTGCTGATGACGAGGATGATGACGACGATATGGATCTGTTTGGCGAAGAGACTGAAGAGGAGAAGAAGGCTGCTGAGGAGCGTGCAGCTGCCGTCAAGGCTTCTGCAAAGAAGAAAGAGAGTGAGTTTTATTTACCATCGATCTTGGTCGTTTTGTATTGTCCACTGATTTTAATAATGTGTGGTTCTTTCTCTTGGGTGCTTGTTTTTAGGTGGAAAATCATCAGTTTTGATGGATATCAAGCCTTGGGATGACGAAACTGACATGAAGAAACTTGAAGAGGCTGTAAGAAGCGTTCAGATGGAGGGATTGCTTTGGGGAGCATGTACGTTCTTATATCGATGCTATCAGTTTGTGGGAATTTTATTTTTTTCATAATGTTGGAAGCTGCAATTTTTTTTTTTTGGTTATTGTTACTTAATAATAATTATACCAGAGCCATCTGTCTCTCTACTGTCCTCAAATCTACTCAGATCTGTTAGTCCATTCAAGTTTTCATGACGTTATTTAGGGTCTCTCTTTCTTCTCATATATATTCTCTATCTTTATATTATATATGTATGTATATCATATATGTCTATATCTTGATTTGCTATGTAAAGCATTTTCTTGTTCTAGTATTATTCCTCATATTACCATGTGTATTGTTACATCTTACGATGATTTTTTTACTGTTGGTATTTAAATTGCAGCCAAACTCGTCCCTGTTGGATATGGTATTAAGAAACTACAGATAATGCTCACAATTGTTGATGACCTTGTGTCGGTCGACAATCTCATTGAGGAATACTTGACAGTTGAACCCATTAACGAGCATGTTCAGAGTTGCGATATTGTTGCCTTCAACAAAATCTAGTGAGTACCATATTTCATTTTGTTACACATAAGCTGGTTAGTAGTTACATAGTTTGAATTTGATGTGTTTAAGGGTCTACTTGGATCGACTTTAAATGTGCTTAAAAATCAACATTTTTGTCTCACTTATTAAGTTAAACTCAAACACTAAAGTCATTTGAGAACTTTTCACCAGATCTTGAATCTGCCATAATATTTTGACAATGGGCTGTTAATTTGTGCAGAGATTGAGCTTTTTGTCAAGTCCAAGATCCTGATCATCATTCAAAAGATGAGGTCTAGTAGTCTATGCAAGAATGAGTTTTGTTATTTGTTCAGGACTTTATCATGCCTATTTCTTGTCTTTACTTTTCAAACTTGATTTGGTTCAATTTGCCATGAAGTCATATATTTTTGGTGTTCCTTCATTTTGTCTTAATGACCTCTCGTGATACACTAAGGTTATGAACTTAATGATGATATGAAAATGAGAAGGAAAGATGGTCAAATAGAGTCAGTGCCCTTACTAAATGGTTTTAATGAACTGCATCATAGATTATTAGTTGTGAAATTAGTTACTGTCTTGGTGATGATCCATGATGACTATCCTTACTAATAATCTTCTAGAAGTTTTTTTCATCATTTAGAAGTTTTTTTTATCGTTTAAATGTTATAGGGCTAGATGAGTTGCATGTAATATGTGTGGGTCCATTTTACCTTTAATTAGTGTATAGTATTGTACAAAATGAATTTGTTTGAAATATTTCAAGTAAACAAACTAATAATGAATTTATAGTGAGTTGAACTTAAT

mRNA sequence

ATGGCGGTCTCATTTAGCGATGTCAAGTCGGCAGCTGGTCTCCAAAAGCTCGACGAGTACCTGCTCAGTCGTAGTTACATTTCTGGGTATCAAGCTTCGAAAGATGATATCGCTGTTTACGAAGCTCTCTCCAAGCCCGTTTCCAGCGAATATGTCAACGTATCTAGATGGTATAATCATATCGCAGCACTCGTGAGAGCCTCTGCTAGTTTTGGAGAGGGTTCTGGCGTTAAGTTCGACTCAGATGCAATCGCTACCCCACCGGCTGCCGATGCTAAGGCTAGTGCTGATGACGAGGATGATGACGACGATATGGATCTGTTTGGCGAAGAGACTGAAGAGGAGAAGAAGGCTGCTGAGGAGCGTGCAGCTGCCGTCAAGGCTTCTGCAAAGAAGAAAGAGAGTGGAAAATCATCAGTTTTGATGGATATCAAGCCTTGGGATGACGAAACTGACATGAAGAAACTTGAAGAGGCTGTAAGAAGCGTTCAGATGGAGGGATTGCTTTGGGGAGCATCCAAACTCGTCCCTGTTGGATATGGTATTAAGAAACTACAGATAATGCTCACAATTGTTGATGACCTTGTGTCGGTCGACAATCTCATTGAGGAATACTTGACAGTTGAACCCATTAACGAGCATGTTCAGAGTTGCGATATTGTTGCCTTCAACAAAATCTAA

Coding sequence (CDS)

ATGGCGGTCTCATTTAGCGATGTCAAGTCGGCAGCTGGTCTCCAAAAGCTCGACGAGTACCTGCTCAGTCGTAGTTACATTTCTGGGTATCAAGCTTCGAAAGATGATATCGCTGTTTACGAAGCTCTCTCCAAGCCCGTTTCCAGCGAATATGTCAACGTATCTAGATGGTATAATCATATCGCAGCACTCGTGAGAGCCTCTGCTAGTTTTGGAGAGGGTTCTGGCGTTAAGTTCGACTCAGATGCAATCGCTACCCCACCGGCTGCCGATGCTAAGGCTAGTGCTGATGACGAGGATGATGACGACGATATGGATCTGTTTGGCGAAGAGACTGAAGAGGAGAAGAAGGCTGCTGAGGAGCGTGCAGCTGCCGTCAAGGCTTCTGCAAAGAAGAAAGAGAGTGGAAAATCATCAGTTTTGATGGATATCAAGCCTTGGGATGACGAAACTGACATGAAGAAACTTGAAGAGGCTGTAAGAAGCGTTCAGATGGAGGGATTGCTTTGGGGAGCATCCAAACTCGTCCCTGTTGGATATGGTATTAAGAAACTACAGATAATGCTCACAATTGTTGATGACCTTGTGTCGGTCGACAATCTCATTGAGGAATACTTGACAGTTGAACCCATTAACGAGCATGTTCAGAGTTGCGATATTGTTGCCTTCAACAAAATCTAA

Protein sequence

MAVSFSDVKSAAGLQKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNHIAALVRASASFGEGSGVKFDSDAIATPPAADAKASADDEDDDDDMDLFGEETEEEKKAAEERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI
Homology
[Close]
BLAST of CsaV3_1G009580 vs. NCBI nr
Match: XP_011652056.1 (PREDICTED: elongation factor 1-delta isoform X1 [Cucumis sativus] >XP_011652060.1 PREDICTED: elongation factor 1-delta isoform X1 [Cucumis sativus] >XP_011652065.1 PREDICTED: elongation factor 1-delta isoform X2 [Cucumis sativus] >KGN64403.1 hypothetical protein Csa_1G050420 [Cucumis sativus])

HSP 1 Score: 318.9 bits (816), Expect = 1.4e-83
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0 

Query: 1   MAVSFSDVKSAAGLQKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH 60
           MAVSFSDVKSAAGLQKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH
Sbjct: 1   MAVSFSDVKSAAGLQKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH 60

Query: 61  IAALVRASASFGEGSGVKFDSDAIATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           IAALVRASASFGEGSGVKFDSDAIATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  IAALVRASASFGEGSGVKFDSDAIATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY 180
           XXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY
Sbjct: 121 XXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY 180

Query: 181 GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 227
           GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI
Sbjct: 181 GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 226

[Close]
BLAST of CsaV3_1G009580 vs. NCBI nr
Match: XP_008439640.1 (PREDICTED: elongation factor 1-delta-like isoform X1 [Cucumis melo] >XP_008439648.1 PREDICTED: elongation factor 1-delta-like isoform X1 [Cucumis melo] >XP_008439655.1 PREDICTED: elongation factor 1-delta-like isoform X2 [Cucumis melo])

HSP 1 Score: 304.7 bits (779), Expect = 2.7e-79
Identity = 218/226 (96.46%), Postives = 222/226 (98.23%), Query Frame = 0 

Query: 1   MAVSFSDVKSAAGLQKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH 60
           MAVS SDVKSAAGL+KLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRW+NH
Sbjct: 1   MAVSLSDVKSAAGLKKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWFNH 60

Query: 61  IAALVRASASFGEGSGVKFDSDAIATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           I ALVRASASFGEGSGVKFDS+AIATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  IEALVRASASFGEGSGVKFDSEAIATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY 180
           XXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVR V MEGLLWGASKLVPVGY
Sbjct: 121 XXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRGVHMEGLLWGASKLVPVGY 180

Query: 181 GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 227
           GIKKLQIMLTIVDDLVSVDNLIEE+LTVEPINEHVQSCDIVAFNKI
Sbjct: 181 GIKKLQIMLTIVDDLVSVDNLIEEHLTVEPINEHVQSCDIVAFNKI 226

[Close]
BLAST of CsaV3_1G009580 vs. NCBI nr
Match: XP_023000996.1 (elongation factor 1-delta-like isoform X1 [Cucurbita maxima] >XP_023000997.1 elongation factor 1-delta-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 285.8 bits (730), Expect = 1.3e-73
Identity = 212/227 (93.39%), Postives = 218/227 (96.04%), Query Frame = 0 

Query: 1   MAVSFSDVKSAAGLQKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH 60
           MAVS SDVKSAAGL+KLD+YLLSRSYISGYQASKDDIAVYEALSKPVSS+YVNVSRW NH
Sbjct: 1   MAVSLSDVKSAAGLKKLDDYLLSRSYISGYQASKDDIAVYEALSKPVSSDYVNVSRWSNH 60

Query: 61  IAALVRASASFGEGSGVKFDS-DAIATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           I AL+R SA FGEGSGVKFDS +AIATP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  IEALLRVSAVFGEGSGVKFDSAEAIATP-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVG 180
           XXXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVG
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVG 180

Query: 181 YGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 227
           YGIKKLQIMLTIVDDLVSVD LIEEYLT EPINE+VQSCDIVAFNKI
Sbjct: 181 YGIKKLQIMLTIVDDLVSVDTLIEEYLTAEPINEYVQSCDIVAFNKI 226

[Close]
BLAST of CsaV3_1G009580 vs. NCBI nr
Match: XP_022924212.1 (elongation factor 1-delta-like isoform X1 [Cucurbita moschata] >XP_022924213.1 elongation factor 1-delta-like isoform X1 [Cucurbita moschata] >XP_022924214.1 elongation factor 1-delta-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 283.9 bits (725), Expect = 4.9e-73
Identity = 211/227 (92.95%), Postives = 217/227 (95.59%), Query Frame = 0 

Query: 1   MAVSFSDVKSAAGLQKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH 60
           MAVS SDVKS AGL+KLD+YLLSRSYISGYQASKDDIAVYEALSKPVSS+YVNVSRW NH
Sbjct: 1   MAVSLSDVKSEAGLKKLDDYLLSRSYISGYQASKDDIAVYEALSKPVSSDYVNVSRWSNH 60

Query: 61  IAALVRASASFGEGSGVKFDS-DAIATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           I AL+R SA FGEGSGVKFDS +AIATP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  IEALLRVSAVFGEGSGVKFDSAEAIATP-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVG 180
           XXXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVG
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVG 180

Query: 181 YGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 227
           YGIKKLQIMLTIVDDLVSVD LIEEYLT EPINE+VQSCDIVAFNKI
Sbjct: 181 YGIKKLQIMLTIVDDLVSVDTLIEEYLTAEPINEYVQSCDIVAFNKI 226

[Close]
BLAST of CsaV3_1G009580 vs. NCBI nr
Match: XP_023519039.1 (elongation factor 1-delta-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023519040.1 elongation factor 1-delta-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023519041.1 elongation factor 1-delta-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 283.5 bits (724), Expect = 6.4e-73
Identity = 211/227 (92.95%), Postives = 217/227 (95.59%), Query Frame = 0 

Query: 1   MAVSFSDVKSAAGLQKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH 60
           MAVS SDVKSAAGL+KLD+YLLSRSYISGYQASKDDIAVYEALSKPVSS+YVNVSRW NH
Sbjct: 1   MAVSLSDVKSAAGLKKLDDYLLSRSYISGYQASKDDIAVYEALSKPVSSDYVNVSRWSNH 60

Query: 61  IAALVRASASFGEGSGVKFDS-DAIATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           I AL+R SA FGEGSGVKFDS +AIATP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  IEALLRVSAVFGEGSGVKFDSAEAIATP-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVG 180
           XXXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGL WGASKLVPVG
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLFWGASKLVPVG 180

Query: 181 YGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 227
           YGIKKLQIMLTIVDDLVSVD LIEEYLT EPINE+VQSCDIVAFNKI
Sbjct: 181 YGIKKLQIMLTIVDDLVSVDALIEEYLTAEPINEYVQSCDIVAFNKI 226

[Close]
BLAST of CsaV3_1G009580 vs. TAIR10
Match: AT1G30230.2 (Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6)

HSP 1 Score: 228.4 bits (581), Expect = 4.4e-60
Identity = 179/229 (78.17%), Postives = 199/229 (86.90%), Query Frame = 0 

Query: 4   SFSDVKSAAGLQKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNHIAA 63
           +F ++ S AGL+KLDE+LL+RSYI+GYQASKDDI V+ AL+KP +S+YVN SRWYNHI A
Sbjct: 3   AFPNLNSDAGLKKLDEHLLTRSYITGYQASKDDITVFAALAKPPTSQYVNASRWYNHIDA 62

Query: 64  LVRASASFGEGSGVKFDSDAIAT------PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 123
           L+R S    EGSGV  +  A  T       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 63  LLRISGVSAEGSGVIVEGSAPITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 122

Query: 124 XXXXXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVP 183
           XXXXXXXXXXXXXXXXXXXXXXVL+DIKPWDDETDMKKLEEAV+S+QMEGL WGASKLVP
Sbjct: 123 XXXXXXXXXXXXXXXXXXXXXXVLIDIKPWDDETDMKKLEEAVKSIQMEGLFWGASKLVP 182

Query: 184 VGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 227
           VGYGIKKLQI+ TIVDDLVS+D +IEE LTVEPINE+VQSCDIVAFNKI
Sbjct: 183 VGYGIKKLQILCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231

[Close]
BLAST of CsaV3_1G009580 vs. TAIR10
Match: AT2G18110.1 (Translation elongation factor EF1B/ribosomal protein S6 family protein)

HSP 1 Score: 227.3 bits (578), Expect = 9.8e-60
Identity = 179/229 (78.17%), Postives = 197/229 (86.03%), Query Frame = 0 

Query: 4   SFSDVKSAAGLQKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNHIAA 63
           +F ++ S +GL+KLDE+LL+RSYI+GYQASKDDI V+ ALSKP +SE+VNVSRW+NHI A
Sbjct: 3   AFPNLNSGSGLKKLDEHLLTRSYITGYQASKDDITVFTALSKPPTSEFVNVSRWFNHIDA 62

Query: 64  LVRASASFGEGSGVKFDSD------AIATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 123
           L+R S    EGSGV  +             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 63  LLRISGVSAEGSGVIVEGSXPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 122

Query: 124 XXXXXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVP 183
           XXXXXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRS+QMEGL WGASKLVP
Sbjct: 123 XXXXXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSIQMEGLFWGASKLVP 182

Query: 184 VGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 227
           VGYGIKKL IM TIVDDLVS+D +IEE LTVEPINE+VQSCDIVAFNKI
Sbjct: 183 VGYGIKKLHIMCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231

[Close]
BLAST of CsaV3_1G009580 vs. TAIR10
Match: AT5G19510.1 (Translation elongation factor EF1B/ribosomal protein S6 family protein)

HSP 1 Score: 179.9 bits (455), Expect = 1.8e-45
Identity = 151/226 (66.81%), Postives = 177/226 (78.32%), Query Frame = 0 

Query: 1   MAVSFSDVKSAAGLQKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH 60
           MAV+FSD+ +  G++ ++E+L  ++YISG Q S DD+ VY A+    S  + N S+WY  
Sbjct: 1   MAVTFSDLHTEEGVKSVEEHLAGKTYISGDQLSVDDVKVYAAVPVKPSDAFPNASKWYES 60

Query: 61  IAALVRASASFGEGSGVKFDSDAIATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           +A+ + A +  G+  GV+F        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  VASQL-AKSFPGKAVGVQF-GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY 180
           XXXXXXXXXXXXXX     VLMD+KPWDDETDMKKLEEAVR V+M GL WGASKLVPVGY
Sbjct: 121 XXXXXXXXXXXXXXSGKSSVLMDVKPWDDETDMKKLEEAVRGVEMPGLFWGASKLVPVGY 180

Query: 181 GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 227
           GIKKL IM TIVDDLVS DNLIE++LT EP NE++QSCDIVAFNKI
Sbjct: 181 GIKKLTIMFTIVDDLVSPDNLIEDFLTSEPNNEYIQSCDIVAFNKI 224

[Close]
BLAST of CsaV3_1G009580 vs. TAIR10
Match: AT5G12110.1 (Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6)

HSP 1 Score: 178.3 bits (451), Expect = 5.2e-45
Identity = 145/230 (63.04%), Postives = 174/230 (75.65%), Query Frame = 0 

Query: 1   MAVSFSDVKSAAGLQKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH 60
           MAV+FSD+ +  GL+ L+E+L  ++YISG Q S DD+ VY A+ +     + N S+WY+ 
Sbjct: 1   MAVTFSDLHTERGLKTLEEHLAGKTYISGDQLSVDDVKVYAAVLENPGDGFPNASKWYDS 60

Query: 61  IAALVRASASFGEGSGVKFDSDAIATP----XXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           +A+ + A +  G+  GV+     +A P     XXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  VASHL-AKSFPGKADGVRV-GGGVAPPSEAHPXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLV 180
           XXXXXXXXXXX            VL+++KPWDDETDMKKLEEAVRSVQM GL WGASKLV
Sbjct: 121 XXXXXXXXXXXDTKKTKESGKSSVLLEVKPWDDETDMKKLEEAVRSVQMPGLTWGASKLV 180

Query: 181 PVGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 227
           PVGYGIKKL IM+TIVDDLVSVDNLIE++LT EP NE++QS DIVAFNKI
Sbjct: 181 PVGYGIKKLTIMMTIVDDLVSVDNLIEDHLTSEPNNEYIQSVDIVAFNKI 228

[Close]
BLAST of CsaV3_1G009580 vs. Swiss-Prot
Match: sp|P93447|EF1D_PIMBR (Elongation factor 1-delta OS=Pimpinella brachycarpa OX=45043 PE=2 SV=3)

HSP 1 Score: 251.1 bits (640), Expect = 1.1e-65
Identity = 181/226 (80.09%), Postives = 203/226 (89.82%), Query Frame = 0 

Query: 1   MAVSFSDVKSAAGLQKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH 60
           MAV+F D+ S AGL+KLDEYLLSRSYISGYQASKDD+AV+ AL+KP SS+YVNVSRWYNH
Sbjct: 1   MAVTFYDLSSEAGLEKLDEYLLSRSYISGYQASKDDLAVHAALAKPPSSKYVNVSRWYNH 60

Query: 61  IAALVRASASFGEGSGVKFDSDAIATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           + AL+R S    EG GV  +  ++ATP   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  VEALLRISGVSAEGCGVTVEGSSVATPPVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY 180
           XXXXXXXXXXXXXXXXXXXVL+D+KPWDDETDM KLEEAVRS++M+GLLWGASKLV VGY
Sbjct: 121 XXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMTKLEEAVRSIKMDGLLWGASKLVAVGY 180

Query: 181 GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 227
           GIKKLQIMLTIVDDLVSVD+L+E+YLT EP NE++QSCDIVAFNKI
Sbjct: 181 GIKKLQIMLTIVDDLVSVDDLVEDYLTAEPANEYIQSCDIVAFNKI 226

[Close]
BLAST of CsaV3_1G009580 vs. Swiss-Prot
Match: sp|Q40680|EF1D1_ORYSJ (Elongation factor 1-delta 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0614500 PE=2 SV=3)

HSP 1 Score: 235.0 bits (598), Expect = 8.5e-61
Identity = 172/229 (75.11%), Postives = 193/229 (84.28%), Query Frame = 0 

Query: 1   MAVSFSDVKSAAGLQKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH 60
           MAVSF++V S AGL+KLDEYLL+RSYISGYQAS DD+AVY A S   SS Y NV+RW+ H
Sbjct: 1   MAVSFTNVSSEAGLKKLDEYLLTRSYISGYQASNDDLAVYSAFSTAPSSSYTNVARWFTH 60

Query: 61  IAALVRASASFGEGSGVKFDSDAI---ATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           I AL+R S    +G GVK +S A+   +TP        XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  IDALLRLSGVTADGQGVKVESTAVPSASTPDVADAKAPXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVP 180
           XXXXXXXXXXXXXXXXXXXXXXVL+D+KPWDDETDM KLEEAVR+V+MEGLLWGASKLVP
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMTKLEEAVRNVKMEGLLWGASKLVP 180

Query: 181 VGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 227
           VGYGIKKLQIM+TIVDDLVSVD+LIE+Y   EP NE++QSCDIVAFNKI
Sbjct: 181 VGYGIKKLQIMMTIVDDLVSVDSLIEDYFYTEPANEYIQSCDIVAFNKI 229

[Close]
BLAST of CsaV3_1G009580 vs. Swiss-Prot
Match: sp|Q40682|EF1D2_ORYSJ (Elongation factor 1-delta 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0406200 PE=2 SV=3)

HSP 1 Score: 232.6 bits (592), Expect = 4.2e-60
Identity = 170/226 (75.22%), Postives = 194/226 (85.84%), Query Frame = 0 

Query: 1   MAVSFSDVKSAAGLQKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH 60
           MA++ S+V S AGLQKLDEYLL+RSYISGYQASKDD+ V+ +L    ++ YVNV+RWY+H
Sbjct: 1   MAITLSNVNSEAGLQKLDEYLLTRSYISGYQASKDDMTVFTSLPSAPAASYVNVTRWYDH 60

Query: 61  IAALVRASASFGEGSGVKFDSDAIATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           I+AL+R+S    EG GVK +S A +        XXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  ISALLRSSGVTAEGEGVKVESTACSVSPTADQKXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY 180
           XXXXXXXXXXXXXXXXXXXVL+D+KPWDDETDM KLEEAVR+V+MEGLLWGASKLVPVGY
Sbjct: 121 XXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMAKLEEAVRNVKMEGLLWGASKLVPVGY 180

Query: 181 GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 227
           GIKKLQIM+TIVDDLVSVD+LIE+Y   EP NE +QSCDIVAFNKI
Sbjct: 181 GIKKLQIMMTIVDDLVSVDSLIEDYFYTEPANEFIQSCDIVAFNKI 226

[Close]
BLAST of CsaV3_1G009580 vs. Swiss-Prot
Match: sp|O81918|EF1D_BETVU (Elongation factor 1-delta OS=Beta vulgaris OX=161934 PE=2 SV=3)

HSP 1 Score: 231.1 bits (588), Expect = 1.2e-59
Identity = 183/231 (79.22%), Postives = 197/231 (85.28%), Query Frame = 0 

Query: 1   MAVSFSDVKSAAGLQKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH 60
           MAV+FSD+ S AGL  LD YLLSRSYI+GYQASKDD+ V+ A+ K   + YVNVSRWY H
Sbjct: 1   MAVTFSDLSSPAGLDSLDAYLLSRSYITGYQASKDDLTVFSAVPKASLASYVNVSRWYKH 60

Query: 61  IAALVRASASFGEGSGVKFD-----SDAIATPXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           I AL+R S   GEGSGV  +     SD     XXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  IDALLRISGVSGEGSGVTVEGNAPASDVATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKL 180
           XXXXXXXXXXXXXXXXXXXXXXXXVL+D+KPWDDETDMKKLEEAVRSVQ EGL  GASKL
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVQQEGLTLGASKL 180

Query: 181 VPVGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 227
           VPVGYGIKKL IM+TIVDDLVSVDNLIE+YLTVEPINE+VQSCDIVAFNKI
Sbjct: 181 VPVGYGIKKLTIMMTIVDDLVSVDNLIEDYLTVEPINEYVQSCDIVAFNKI 231

[Close]
BLAST of CsaV3_1G009580 vs. Swiss-Prot
Match: sp|P48006|EF1D1_ARATH (Elongation factor 1-delta 1 OS=Arabidopsis thaliana OX=3702 GN=At1g30230 PE=1 SV=2)

HSP 1 Score: 228.4 bits (581), Expect = 7.9e-59
Identity = 179/229 (78.17%), Postives = 199/229 (86.90%), Query Frame = 0 

Query: 4   SFSDVKSAAGLQKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNHIAA 63
           +F ++ S AGL+KLDE+LL+RSYI+GYQASKDDI V+ AL+KP +S+YVN SRWYNHI A
Sbjct: 3   AFPNLNSDAGLKKLDEHLLTRSYITGYQASKDDITVFAALAKPPTSQYVNASRWYNHIDA 62

Query: 64  LVRASASFGEGSGVKFDSDAIAT------PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 123
           L+R S    EGSGV  +  A  T       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 63  LLRISGVSAEGSGVIVEGSAPITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 122

Query: 124 XXXXXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVP 183
           XXXXXXXXXXXXXXXXXXXXXXVL+DIKPWDDETDMKKLEEAV+S+QMEGL WGASKLVP
Sbjct: 123 XXXXXXXXXXXXXXXXXXXXXXVLIDIKPWDDETDMKKLEEAVKSIQMEGLFWGASKLVP 182

Query: 184 VGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 227
           VGYGIKKLQI+ TIVDDLVS+D +IEE LTVEPINE+VQSCDIVAFNKI
Sbjct: 183 VGYGIKKLQILCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231

[Close]
BLAST of CsaV3_1G009580 vs. TrEMBL
Match: tr|A0A0A0LRI8|A0A0A0LRI8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050420 PE=3 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 9.0e-84
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0 

Query: 1   MAVSFSDVKSAAGLQKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH 60
           MAVSFSDVKSAAGLQKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH
Sbjct: 1   MAVSFSDVKSAAGLQKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH 60

Query: 61  IAALVRASASFGEGSGVKFDSDAIATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           IAALVRASASFGEGSGVKFDSDAIATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  IAALVRASASFGEGSGVKFDSDAIATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY 180
           XXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY
Sbjct: 121 XXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY 180

Query: 181 GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 227
           GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI
Sbjct: 181 GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 226

[Close]
BLAST of CsaV3_1G009580 vs. TrEMBL
Match: tr|A0A1S3AZ96|A0A1S3AZ96_CUCME (elongation factor 1-delta-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484370 PE=3 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 1.8e-79
Identity = 218/226 (96.46%), Postives = 222/226 (98.23%), Query Frame = 0 

Query: 1   MAVSFSDVKSAAGLQKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH 60
           MAVS SDVKSAAGL+KLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRW+NH
Sbjct: 1   MAVSLSDVKSAAGLKKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWFNH 60

Query: 61  IAALVRASASFGEGSGVKFDSDAIATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           I ALVRASASFGEGSGVKFDS+AIATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  IEALVRASASFGEGSGVKFDSEAIATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY 180
           XXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVR V MEGLLWGASKLVPVGY
Sbjct: 121 XXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRGVHMEGLLWGASKLVPVGY 180

Query: 181 GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 227
           GIKKLQIMLTIVDDLVSVDNLIEE+LTVEPINEHVQSCDIVAFNKI
Sbjct: 181 GIKKLQIMLTIVDDLVSVDNLIEEHLTVEPINEHVQSCDIVAFNKI 226

[Close]
BLAST of CsaV3_1G009580 vs. TrEMBL
Match: tr|A0A0A0KDI4|A0A0A0KDI4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014660 PE=3 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 4.6e-72
Identity = 209/226 (92.48%), Postives = 215/226 (95.13%), Query Frame = 0 

Query: 1   MAVSFSDVKSAAGLQKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH 60
           MAV+F DVKSA+GL+KLDEYLLSRSYISGYQ SKDD+ VYEALSKPVSSEYVNVSRW NH
Sbjct: 43  MAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNH 102

Query: 61  IAALVRASASFGEGSGVKFDSDAIATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           I AL+R SA FGEGSGVK   DA+AT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 103 IEALLRVSAVFGEGSGVKL--DAVAT-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 162

Query: 121 XXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY 180
           XXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY
Sbjct: 163 XXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY 222

Query: 181 GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 227
           GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI
Sbjct: 223 GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 265

[Close]
BLAST of CsaV3_1G009580 vs. TrEMBL
Match: tr|A0A1S3C5C6|A0A1S3C5C6_CUCME (elongation factor 1-delta 2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496637 PE=3 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 8.8e-71
Identity = 194/226 (85.84%), Postives = 202/226 (89.38%), Query Frame = 0 

Query: 1   MAVSFSDVKSAAGLQKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH 60
           MAV+F DVKSA+GL++LDEYLLSRSYISGYQ SKDD+ VYEALSKPV SEYVNVSRW NH
Sbjct: 1   MAVAFPDVKSASGLKELDEYLLSRSYISGYQPSKDDVTVYEALSKPVYSEYVNVSRWSNH 60

Query: 61  IAALVRASASFGEGSGVKFDSDAIATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           I AL+R SA FGEGSGVK   DA+ATP            XXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  IEALLRVSAVFGEGSGVKL--DAVATP-----PAADAKVXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY 180
           XXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY
Sbjct: 121 XXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY 180

Query: 181 GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 227
           GIKKLQIMLTIVDDLVSVDNLIEE+LT EPINEHVQSCDIVAFNKI
Sbjct: 181 GIKKLQIMLTIVDDLVSVDNLIEEHLTAEPINEHVQSCDIVAFNKI 219

[Close]
BLAST of CsaV3_1G009580 vs. TrEMBL
Match: tr|A0A1S3C464|A0A1S3C464_CUCME (elongation factor 1-delta 2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496637 PE=3 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 8.8e-71
Identity = 194/226 (85.84%), Postives = 202/226 (89.38%), Query Frame = 0 

Query: 1   MAVSFSDVKSAAGLQKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH 60
           MAV+F DVKSA+GL++LDEYLLSRSYISGYQ SKDD+ VYEALSKPV SEYVNVSRW NH
Sbjct: 1   MAVAFPDVKSASGLKELDEYLLSRSYISGYQPSKDDVTVYEALSKPVYSEYVNVSRWSNH 60

Query: 61  IAALVRASASFGEGSGVKFDSDAIATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           I AL+R SA FGEGSGVK   DA+ATP            XXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  IEALLRVSAVFGEGSGVKL--DAVATP-----PAADAKVXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY 180
           XXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY
Sbjct: 121 XXXXXXXXXXXXXXXXXXXVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY 180

Query: 181 GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 227
           GIKKLQIMLTIVDDLVSVDNLIEE+LT EPINEHVQSCDIVAFNKI
Sbjct: 181 GIKKLQIMLTIVDDLVSVDNLIEEHLTAEPINEHVQSCDIVAFNKI 219

The following BLAST results are available for this feature:
BLAST of CsaV3_1G009580 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011652056.11.4e-83100.00PREDICTED: elongation factor 1-delta isoform X1 [Cucumis sativus] >XP_011652060.... [more]
XP_008439640.12.7e-7996.46PREDICTED: elongation factor 1-delta-like isoform X1 [Cucumis melo] >XP_00843964... [more]
XP_023000996.11.3e-7393.39elongation factor 1-delta-like isoform X1 [Cucurbita maxima] >XP_023000997.1 elo... [more]
XP_022924212.14.9e-7392.95elongation factor 1-delta-like isoform X1 [Cucurbita moschata] >XP_022924213.1 e... [more]
XP_023519039.16.4e-7392.95elongation factor 1-delta-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_02351... [more]
BLAST of CsaV3_1G009580 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G30230.24.4e-6078.17Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/r... [more]
AT2G18110.19.8e-6078.17Translation elongation factor EF1B/ribosomal protein S6 family protein[more]
AT5G19510.11.8e-4566.81Translation elongation factor EF1B/ribosomal protein S6 family protein[more]
AT5G12110.15.2e-4563.04Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/r... [more]
BLAST of CsaV3_1G009580 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P93447|EF1D_PIMBR1.1e-6580.09Elongation factor 1-delta OS=Pimpinella brachycarpa OX=45043 PE=2 SV=3[more]
sp|Q40680|EF1D1_ORYSJ8.5e-6175.11Elongation factor 1-delta 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g061... [more]
sp|Q40682|EF1D2_ORYSJ4.2e-6075.22Elongation factor 1-delta 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g040... [more]
sp|O81918|EF1D_BETVU1.2e-5979.22Elongation factor 1-delta OS=Beta vulgaris OX=161934 PE=2 SV=3[more]
sp|P48006|EF1D1_ARATH7.9e-5978.17Elongation factor 1-delta 1 OS=Arabidopsis thaliana OX=3702 GN=At1g30230 PE=1 SV... [more]
BLAST of CsaV3_1G009580 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LRI8|A0A0A0LRI8_CUCSA9.0e-84100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050420 PE=3 SV=1[more]
tr|A0A1S3AZ96|A0A1S3AZ96_CUCME1.8e-7996.46elongation factor 1-delta-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC10348437... [more]
tr|A0A0A0KDI4|A0A0A0KDI4_CUCSA4.6e-7292.48Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014660 PE=3 SV=1[more]
tr|A0A1S3C5C6|A0A1S3C5C6_CUCME8.8e-7185.84elongation factor 1-delta 2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496... [more]
tr|A0A1S3C464|A0A1S3C464_CUCME8.8e-7185.84elongation factor 1-delta 2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005853eukaryotic translation elongation factor 1 complex
Vocabulary: Biological Process
TermDefinition
GO:0006414translational elongation
Vocabulary: Molecular Function
TermDefinition
GO:0003746translation elongation factor activity
Vocabulary: INTERPRO
TermDefinition
IPR036219eEF-1beta-like_sf
IPR036282Glutathione-S-Trfase_C_sf
IPR001326Transl_elong_EF1B_B/D_CS
IPR014717Transl_elong_EF1B/ribosomal_S6
IPR014038EF1B_bsu/dsu_GNE
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0008150 biological_process
biological_process GO:0006414 translational elongation
cellular_component GO:0005853 eukaryotic translation elongation factor 1 complex
cellular_component GO:0005840 ribosome
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0005524 ATP binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G009580.1CsaV3_1G009580.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 109..129
NoneNo IPR availableGENE3DG3DSA:1.20.1050.130coord: 2..74
e-value: 4.8E-10
score: 41.4
NoneNo IPR availablePANTHERPTHR11595:SF27SUBFAMILY NOT NAMEDcoord: 1..226
NoneNo IPR availablePANTHERPTHR11595ELONGATION FACTOR 1-BETAcoord: 1..226
IPR014038Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domainSMARTSM00888EF1_GNE_2coord: 137..226
e-value: 7.4E-37
score: 138.4
IPR014038Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domainPFAMPF00736EF1_GNEcoord: 139..226
e-value: 1.0E-33
score: 115.2
IPR014038Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domainCDDcd00292EF1Bcoord: 135..226
e-value: 1.36565E-37
score: 127.328
IPR014717Translation elongation factor EF1B/ribosomal protein S6GENE3DG3DSA:3.30.70.60coord: 130..226
e-value: 8.4E-44
score: 149.5
IPR001326Translation elongation factor EF1B, beta/delta chains, conserved sitePROSITEPS00824EF1BD_1coord: 101..109
IPR001326Translation elongation factor EF1B, beta/delta chains, conserved sitePROSITEPS00825EF1BD_2coord: 215..226
IPR036282Glutathione S-transferase, C-terminal domain superfamilySUPERFAMILYSSF47616GST C-terminal domain-likecoord: 10..65
IPR036219Translation elongation factor eEF-1beta-like superfamilySUPERFAMILYSSF54984eEF-1beta-likecoord: 134..226

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_1G009580CSPI01G09470Wild cucumber (PI 183967)cpicucB001
CsaV3_1G009580Cucsa.392030Cucumber (Gy14) v1cgycucB592
CsaV3_1G009580CmaCh18G003230Cucurbita maxima (Rimu)cmacucB0474
CsaV3_1G009580CmoCh18G002110Cucurbita moschata (Rifu)cmocucB0457
CsaV3_1G009580Cp4.1LG09g09650Cucurbita pepo (Zucchini)cpecucB0031
CsaV3_1G009580CsGy1G009520Cucumber (Gy14) v2cgybcucB002
CsaV3_1G009580Cla002613Watermelon (97103) v1cucwmB013
CsaV3_1G009580MELO3C002355Melon (DHL92) v3.5.1cucmeB024
CsaV3_1G009580ClCG03G003700Watermelon (Charleston Gray)cucwcgB038
CsaV3_1G009580MELO3C002355.2Melon (DHL92) v3.6.1cucmedB022
CsaV3_1G009580Cla97C03G054840Watermelon (97103) v2cucwmbB030
CsaV3_1G009580Bhi08G001222Wax gourdcucwgoB035
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_1G009580Cucumber (Chinese Long) v3cuccucB003
CsaV3_1G009580Cucumber (Chinese Long) v3cuccucB010
CsaV3_1G009580Silver-seed gourdcarcucB0397
CsaV3_1G009580Silver-seed gourdcarcucB0529
CsaV3_1G009580Silver-seed gourdcarcucB1046
CsaV3_1G009580Cucumber (Gy14) v2cgybcucB011
CsaV3_1G009580Cucumber (Gy14) v1cgycucB237
CsaV3_1G009580Cucurbita maxima (Rimu)cmacucB0078
CsaV3_1G009580Cucurbita maxima (Rimu)cmacucB0124
CsaV3_1G009580Cucurbita maxima (Rimu)cmacucB0235
CsaV3_1G009580Cucurbita moschata (Rifu)cmocucB0066
CsaV3_1G009580Cucurbita moschata (Rifu)cmocucB0110
CsaV3_1G009580Cucurbita moschata (Rifu)cmocucB0222
CsaV3_1G009580Cucurbita pepo (Zucchini)cpecucB0439
CsaV3_1G009580Cucurbita pepo (Zucchini)cpecucB0634
CsaV3_1G009580Cucurbita pepo (Zucchini)cpecucB0808
CsaV3_1G009580Wild cucumber (PI 183967)cpicucB015
CsaV3_1G009580Bottle gourd (USVL1VR-Ls)cuclsiB022
CsaV3_1G009580Bottle gourd (USVL1VR-Ls)cuclsiB077
CsaV3_1G009580Melon (DHL92) v3.5.1cucmeB051
CsaV3_1G009580Melon (DHL92) v3.6.1cucmedB048
CsaV3_1G009580Watermelon (Charleston Gray)cucwcgB080
CsaV3_1G009580Watermelon (97103) v1cucwmB098
CsaV3_1G009580Watermelon (97103) v2cucwmbB071