CSPI01G09470 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G09470
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionElongation factor 1 beta
LocationChr1 : 5928916 .. 5931292 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCGATCCCTTAGCTTCTTAACAACTTTCTCTGTGAGTTCTAGCGTTGCTGCCGGCGGTAAGCTACCGATCACTCATTTTTTATTTAGTTCGTATCATTAACGTATGAAAACTATGGTTTTTTAACTTGTTGAGTTTAATTTTTGAATAGAAAGAAATCACATCAGTTCGCAATGGCGGTCTCATTTAGCGATGTCAAGTCGGCAGCTGGTCTCAAAAAGCTCGACGAGTACCTGCTCAGTCGTAGTTACATTTCTGGGTTAGTTTATCATCTGAAATCTTCGATTTGAATTTGCTATTTGATTTGGCTTCTCTTCATTGGAAGACGATTGATTTATATCAAGGGCGGAGAGAAATGTTTGTTAGTAATGGTATTAACATTTAGTGTATGGAATCTGGTCTTTTATATGTTCGACGAATGTTCATTCACAGGTATCAAGCTTCGAAAGATGATATCGCTGTTTACGAAGCTCTCTCCAAGCCCGTTTCCAGCGAATATGTCAACGTATCTAGATGGTATAATCATATCGCAGCACTCGTGAGAGCCTCGTAAGTCTCCAAATTGCTTATTTTTGCTGTTCAATTCCATGGTTAGTTTTGTTCTCGCTCCTAACTCATACTAATTGGCTTTTGTTATTGTTTTATAGTGCTAGTTTTGGAGAGGGTTCTGGCGTTAAGTTCGACTCAGATGCAATCGCTACCCCACCGGCTGCCGATGCTAAGGTGAAAATATTATGCAATATTTACCCCATTTTTGAGTTGTGTGACGTTATGGTGGTTTTCCTTGTGTTTACAATTTAATATTTACTCTGAAACACTTACCAGGCTAGTGCTGATGACGAGGATGATGACGACGATATGGATCTGTTTGGCGAAGAGACTGAAGAGGAGAAGAAGGCTGCTGAGGAGCGTGCAGCTGCCGTCAAGGCTTCTGCAAAGAAGAAAGAGAGTGAGTTTTATTTACCATCGATCTTGGTCGTCTTGTATTGTCCACTGATTTTAATAATGTGTGGTTCTTTCTCTTGGGTGCTTGTTTTTAGGTGGAAAATCATCAGTTTTGATGGATATCAAGCCTTGGGATGACGAAACTGACATGAAGAAACTTGAAGAGGCTGTAAGAAGCGTTCAGATGGAGGGATTGCTTTGGGGAGCATGTACGTTCTTATATCGATGCTATCAGTTTGTGGGAATTTTATTTTTTTCATAATGTTGGAAGCTGCAATTTTTTTTTTTTTTTGGTTATTGTTAATAATAATTATACCAGAGCCATCGGTCTCTCTACTGTCCTCAAATCTACTCAGATCTGTTAGTCCATTCAAGTTTTCATGACGTTATTTAGGGTCTCTCTTTCTTCTCATATATATTCTCTATCTTTATATTATATATGTATGTATATCATATATGTCTATATCTTGATTTGCTATGTAAAGCATTTTCTTGTTCTAGTATTATTCCTCATATTACCATGTGTATTGTTACATCTGACCATGATTTTTTTACTGTTGGTATTTAAATTGCAGCCAAGCTCGTCCCTGTTGGATATGGTATTAAGAAACTACAGATAATGCTCACAATTGTTGATGACCTTGTGTCGGTCGACAATCTCATTGAGGAATACTTGACAGTTGAACCCATTAACGAGCATGTTCAGAGTTGCGATATTGTTGCCTTCAACAAAATCTAGTGAGTACCATATTTCATTTTGTTACACATAAGCTGGTTAGTAGTTACATAGTTTGAATTTGATGTGTTCAAGGGTCTACTTGGATCGACTTTAAATGTGCTTAAAAATCAACATTTTTGTCTCATTTATTAAGTTAAACTCAAACACTAAAGTCATTTGAGAACTTTTCACCAGATCTTGAATCTGCCATAATATTTTGACAATGGGCTGTTAATTTGTGCAGAGATTGAGCTTTTTGTCAAGTCCAAGATCCTGATCATCATTCAAAAGATGAGGTCTAGTAGTCTATGCAAGAATGAGTTTTGTTATTTGTTCAGGACTTTATCATGCCTATTTCTCGTCTTTACTTTTCAAACTTGATTTGGTTCAATTTGCTATGAAGTCATATATTTTTGGTGTTCCTTCATTTTGTCTTAATGACCTCTCGTGATACACTAAGGTTATGAACTTAATGATGATATGAAAATGAGAATGAAAGATGGTCAAATAGAGTCAGTGCCCTTACTAAATGGTTTTAATGAACTGCATCTTAGATTATTAGTTGTGAAATTAGTTACTGTCTTGGTGACGATCCATGATGACTATCCTTACTAATAATCTTCTAGAAGTTTTTTTCATCATTTAGAAGTTTTTTTATCGTTTAAATGTTATAGGGCTAGATGAGTTGCATGTAATATGTGTGGTCCATTTTACC

mRNA sequence

ATGGCGGTCTCATTTAGCGATGTCAAGTCGGCAGCTGGTCTCAAAAAGCTCGACGAGTACCTGCTCAGTCGTAGTTACATTTCTGGGTATCAAGCTTCGAAAGATGATATCGCTGTTTACGAAGCTCTCTCCAAGCCCGTTTCCAGCGAATATGTCAACGTATCTAGATGGTATAATCATATCGCAGCACTCGTGAGAGCCTCTGCTAGTTTTGGAGAGGGTTCTGGCGTTAAGTTCGACTCAGATGCAATCGCTACCCCACCGGCTGCCGATGCTAAGGCTAGTGCTGATGACGAGGATGATGACGACGATATGGATCTGTTTGGCGAAGAGACTGAAGAGGAGAAGAAGGCTGCTGAGGAGCGTGCAGCTGCCGTCAAGGCTTCTGCAAAGAAGAAAGAGAGTGGAAAATCATCAGTTTTGATGGATATCAAGCCTTGGGATGACGAAACTGACATGAAGAAACTTGAAGAGGCTGTAAGAAGCGTTCAGATGGAGGGATTGCTTTGGGGAGCATCCAAGCTCGTCCCTGTTGGATATGGTATTAAGAAACTACAGATAATGCTCACAATTGTTGATGACCTTGTGTCGGTCGACAATCTCATTGAGGAATACTTGACAGTTGAACCCATTAACGAGCATGTTCAGAGTTGCGATATTGTTGCCTTCAACAAAATCTAA

Coding sequence (CDS)

ATGGCGGTCTCATTTAGCGATGTCAAGTCGGCAGCTGGTCTCAAAAAGCTCGACGAGTACCTGCTCAGTCGTAGTTACATTTCTGGGTATCAAGCTTCGAAAGATGATATCGCTGTTTACGAAGCTCTCTCCAAGCCCGTTTCCAGCGAATATGTCAACGTATCTAGATGGTATAATCATATCGCAGCACTCGTGAGAGCCTCTGCTAGTTTTGGAGAGGGTTCTGGCGTTAAGTTCGACTCAGATGCAATCGCTACCCCACCGGCTGCCGATGCTAAGGCTAGTGCTGATGACGAGGATGATGACGACGATATGGATCTGTTTGGCGAAGAGACTGAAGAGGAGAAGAAGGCTGCTGAGGAGCGTGCAGCTGCCGTCAAGGCTTCTGCAAAGAAGAAAGAGAGTGGAAAATCATCAGTTTTGATGGATATCAAGCCTTGGGATGACGAAACTGACATGAAGAAACTTGAAGAGGCTGTAAGAAGCGTTCAGATGGAGGGATTGCTTTGGGGAGCATCCAAGCTCGTCCCTGTTGGATATGGTATTAAGAAACTACAGATAATGCTCACAATTGTTGATGACCTTGTGTCGGTCGACAATCTCATTGAGGAATACTTGACAGTTGAACCCATTAACGAGCATGTTCAGAGTTGCGATATTGTTGCCTTCAACAAAATCTAA
Homology
[Close]
BLAST of CSPI01G09470 vs. Swiss-Prot
Match: EF1D_PIMBR (Elongation factor 1-delta OS=Pimpinella brachycarpa PE=2 SV=3)

HSP 1 Score: 339.3 bits (869), Expect = 3.1e-92
Identity = 176/226 (77.88%), Postives = 202/226 (89.38%), Query Frame = 1 

Query: 1   MAVSFSDVKSAAGLKKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH 60
           MAV+F D+ S AGL+KLDEYLLSRSYISGYQASKDD+AV+ AL+KP SS+YVNVSRWYNH
Sbjct: 1   MAVTFYDLSSEAGLEKLDEYLLSRSYISGYQASKDDLAVHAALAKPPSSKYVNVSRWYNH 60

Query: 61  IAALVRASASFGEGSGVKFDSDAIATPPAADAKASADDEDDDDDMDLFGEETEEEKKAAE 120
           + AL+R S    EG GV  +  ++ATPP AD KASA ++DDDDD+DLFGEETEEEKKA+E
Sbjct: 61  VEALLRISGVSAEGCGVTVEGSSVATPPVADTKASAAEDDDDDDVDLFGEETEEEKKASE 120

Query: 121 ERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY 180
           ERAAAVKAS KKKESGKSSVL+D+KPWDDETDM KLEEAVRS++M+GLLWGASKLV VGY
Sbjct: 121 ERAAAVKASGKKKESGKSSVLLDVKPWDDETDMTKLEEAVRSIKMDGLLWGASKLVAVGY 180

Query: 181 GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 227
           GIKKLQIMLTIVDDLVSVD+L+E+YLT EP NE++QSCDIVAFNKI
Sbjct: 181 GIKKLQIMLTIVDDLVSVDDLVEDYLTAEPANEYIQSCDIVAFNKI 226

[Close]
BLAST of CSPI01G09470 vs. Swiss-Prot
Match: EF1D2_ARATH (Elongation factor 1-delta 2 OS=Arabidopsis thaliana GN=At2g18110 PE=1 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 1.6e-88
Identity = 175/229 (76.42%), Postives = 200/229 (87.34%), Query Frame = 1 

Query: 4   SFSDVKSAAGLKKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNHIAA 63
           +F ++ S +GLKKLDE+LL+RSYI+GYQASKDDI V+ ALSKP +SE+VNVSRW+NHI A
Sbjct: 3   AFPNLNSGSGLKKLDEHLLTRSYITGYQASKDDITVFTALSKPPTSEFVNVSRWFNHIDA 62

Query: 64  LVRASASFGEGSGVKFDS------DAIATPPAADAKASADDEDDDDDMDLFGEETEEEKK 123
           L+R S    EGSGV  +       +A+ATPPAAD+K +A +E+DDDD+DLFGEETEEEKK
Sbjct: 63  LLRISGVSAEGSGVIVEGSSPITEEAVATPPAADSKDTAAEEEDDDDVDLFGEETEEEKK 122

Query: 124 AAEERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVP 183
           AAEERAA+VKAS KKKESGKSSVLMDIKPWDDETDMKKLEEAVRS+QMEGL WGASKLVP
Sbjct: 123 AAEERAASVKASTKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSIQMEGLFWGASKLVP 182

Query: 184 VGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 227
           VGYGIKKL IM TIVDDLVS+D +IEE LTVEPINE+VQSCDIVAFNKI
Sbjct: 183 VGYGIKKLHIMCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231

[Close]
BLAST of CSPI01G09470 vs. Swiss-Prot
Match: EF1D1_ARATH (Elongation factor 1-delta 1 OS=Arabidopsis thaliana GN=At1g30230 PE=1 SV=2)

HSP 1 Score: 326.2 bits (835), Expect = 2.8e-88
Identity = 174/229 (75.98%), Postives = 200/229 (87.34%), Query Frame = 1 

Query: 4   SFSDVKSAAGLKKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNHIAA 63
           +F ++ S AGLKKLDE+LL+RSYI+GYQASKDDI V+ AL+KP +S+YVN SRWYNHI A
Sbjct: 3   AFPNLNSDAGLKKLDEHLLTRSYITGYQASKDDITVFAALAKPPTSQYVNASRWYNHIDA 62

Query: 64  LVRASASFGEGSGVKFDS------DAIATPPAADAKASADDEDDDDDMDLFGEETEEEKK 123
           L+R S    EGSGV  +       +A+ATPPAAD+K +A DE+DDDD+DLFGEETEEEKK
Sbjct: 63  LLRISGVSAEGSGVIVEGSAPITEEAVATPPAADSKDAAADEEDDDDVDLFGEETEEEKK 122

Query: 124 AAEERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVP 183
           AAEERAA+VKAS KKKESGKSSVL+DIKPWDDETDMKKLEEAV+S+QMEGL WGASKLVP
Sbjct: 123 AAEERAASVKASTKKKESGKSSVLIDIKPWDDETDMKKLEEAVKSIQMEGLFWGASKLVP 182

Query: 184 VGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 227
           VGYGIKKLQI+ TIVDDLVS+D +IEE LTVEPINE+VQSCDIVAFNKI
Sbjct: 183 VGYGIKKLQILCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231

[Close]
BLAST of CSPI01G09470 vs. Swiss-Prot
Match: EF1D1_ORYSJ (Elongation factor 1-delta 1 OS=Oryza sativa subsp. japonica GN=Os07g0614500 PE=2 SV=3)

HSP 1 Score: 324.3 bits (830), Expect = 1.0e-87
Identity = 174/229 (75.98%), Postives = 196/229 (85.59%), Query Frame = 1 

Query: 1   MAVSFSDVKSAAGLKKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH 60
           MAVSF++V S AGLKKLDEYLL+RSYISGYQAS DD+AVY A S   SS Y NV+RW+ H
Sbjct: 1   MAVSFTNVSSEAGLKKLDEYLLTRSYISGYQASNDDLAVYSAFSTAPSSSYTNVARWFTH 60

Query: 61  IAALVRASASFGEGSGVKFDSDAI---ATPPAADAKASADDEDDDDDMDLFGEETEEEKK 120
           I AL+R S    +G GVK +S A+   +TP  ADAKA A D+DDDDD+DLFGEETEEEKK
Sbjct: 61  IDALLRLSGVTADGQGVKVESTAVPSASTPDVADAKAPAADDDDDDDVDLFGEETEEEKK 120

Query: 121 AAEERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVP 180
           AAEERAAAVKAS KKKESGKSSVL+D+KPWDDETDM KLEEAVR+V+MEGLLWGASKLVP
Sbjct: 121 AAEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMTKLEEAVRNVKMEGLLWGASKLVP 180

Query: 181 VGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 227
           VGYGIKKLQIM+TIVDDLVSVD+LIE+Y   EP NE++QSCDIVAFNKI
Sbjct: 181 VGYGIKKLQIMMTIVDDLVSVDSLIEDYFYTEPANEYIQSCDIVAFNKI 229

[Close]
BLAST of CSPI01G09470 vs. Swiss-Prot
Match: EF1D_BETVU (Elongation factor 1-delta OS=Beta vulgaris PE=2 SV=3)

HSP 1 Score: 322.4 bits (825), Expect = 4.0e-87
Identity = 178/231 (77.06%), Postives = 197/231 (85.28%), Query Frame = 1 

Query: 1   MAVSFSDVKSAAGLKKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH 60
           MAV+FSD+ S AGL  LD YLLSRSYI+GYQASKDD+ V+ A+ K   + YVNVSRWY H
Sbjct: 1   MAVTFSDLSSPAGLDSLDAYLLSRSYITGYQASKDDLTVFSAVPKASLASYVNVSRWYKH 60

Query: 61  IAALVRASASFGEGSGVKFDSDA----IATPPAADAKASADDEDDDDDMDLFGEETEEEK 120
           I AL+R S   GEGSGV  + +A    +ATPPAAD+KASA D+DDDDD+DLFGEETEEEK
Sbjct: 61  IDALLRISGVSGEGSGVTVEGNAPASDVATPPAADSKASAADDDDDDDVDLFGEETEEEK 120

Query: 121 KAAEERAAAVKAS-AKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKL 180
           KAAEERAAA  A  AKKKESGKSSVL+D+KPWDDETDMKKLEEAVRSVQ EGL  GASKL
Sbjct: 121 KAAEERAAAAAAKPAKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVQQEGLTLGASKL 180

Query: 181 VPVGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 227
           VPVGYGIKKL IM+TIVDDLVSVDNLIE+YLTVEPINE+VQSCDIVAFNKI
Sbjct: 181 VPVGYGIKKLTIMMTIVDDLVSVDNLIEDYLTVEPINEYVQSCDIVAFNKI 231

[Close]
BLAST of CSPI01G09470 vs. TrEMBL
Match: A0A0A0LRI8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050420 PE=3 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 3.5e-114
Identity = 225/226 (99.56%), Postives = 226/226 (100.00%), Query Frame = 1 

Query: 1   MAVSFSDVKSAAGLKKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH 60
           MAVSFSDVKSAAGL+KLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH
Sbjct: 1   MAVSFSDVKSAAGLQKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH 60

Query: 61  IAALVRASASFGEGSGVKFDSDAIATPPAADAKASADDEDDDDDMDLFGEETEEEKKAAE 120
           IAALVRASASFGEGSGVKFDSDAIATPPAADAKASADDEDDDDDMDLFGEETEEEKKAAE
Sbjct: 61  IAALVRASASFGEGSGVKFDSDAIATPPAADAKASADDEDDDDDMDLFGEETEEEKKAAE 120

Query: 121 ERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY 180
           ERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY
Sbjct: 121 ERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY 180

Query: 181 GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 227
           GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI
Sbjct: 181 GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 226

[Close]
BLAST of CSPI01G09470 vs. TrEMBL
Match: A0A0A0KDI4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014660 PE=3 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 1.2e-103
Identity = 209/226 (92.48%), Postives = 215/226 (95.13%), Query Frame = 1 

Query: 1   MAVSFSDVKSAAGLKKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH 60
           MAV+F DVKSA+GLKKLDEYLLSRSYISGYQ SKDD+ VYEALSKPVSSEYVNVSRW NH
Sbjct: 43  MAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNH 102

Query: 61  IAALVRASASFGEGSGVKFDSDAIATPPAADAKASADDEDDDDDMDLFGEETEEEKKAAE 120
           I AL+R SA FGEGSGVK D  A+ATPPAADAKA ADD+DDDDDMDLFGEETEEEKKAAE
Sbjct: 103 IEALLRVSAVFGEGSGVKLD--AVATPPAADAKA-ADDDDDDDDMDLFGEETEEEKKAAE 162

Query: 121 ERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY 180
           ERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY
Sbjct: 163 ERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY 222

Query: 181 GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 227
           GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI
Sbjct: 223 GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 265

[Close]
BLAST of CSPI01G09470 vs. TrEMBL
Match: A0A0D2RIZ3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G205500 PE=3 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 2.4e-91
Identity = 187/230 (81.30%), Postives = 205/230 (89.13%), Query Frame = 1 

Query: 1   MAVSFSDVKSAAGLKKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH 60
           MAV+F+D+ SAAGLKKLDEYLL+RSYISGYQASKDDI VY ALS   SS YVNVSRWY H
Sbjct: 49  MAVTFNDLGSAAGLKKLDEYLLTRSYISGYQASKDDITVYAALSGAPSSSYVNVSRWYKH 108

Query: 61  IAALVRASASFGEGSGVKFD----SDAIATPPAADAKASADDEDDDDDMDLFGEETEEEK 120
           I AL+R S    EG GV  +    ++A+ATPP AD+KA+A ++DDDDD+DLFGEETEEEK
Sbjct: 109 IDALLRISGVSEEGCGVTVEGFAPAEAVATPPVADSKAAAAEDDDDDDVDLFGEETEEEK 168

Query: 121 KAAEERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLV 180
           KAAEERAAAVKAS KKKESGKSSVL+DIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLV
Sbjct: 169 KAAEERAAAVKASGKKKESGKSSVLLDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLV 228

Query: 181 PVGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 227
           PVGYGIKKLQIM+TIVDDLVSVD LIEE+LTVEPINE+VQSCDIVAFNKI
Sbjct: 229 PVGYGIKKLQIMMTIVDDLVSVDTLIEEHLTVEPINEYVQSCDIVAFNKI 278

[Close]
BLAST of CSPI01G09470 vs. TrEMBL
Match: A0A0D2T3X4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G205500 PE=3 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 2.4e-91
Identity = 187/230 (81.30%), Postives = 205/230 (89.13%), Query Frame = 1 

Query: 1   MAVSFSDVKSAAGLKKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH 60
           MAV+F+D+ SAAGLKKLDEYLL+RSYISGYQASKDDI VY ALS   SS YVNVSRWY H
Sbjct: 1   MAVTFNDLGSAAGLKKLDEYLLTRSYISGYQASKDDITVYAALSGAPSSSYVNVSRWYKH 60

Query: 61  IAALVRASASFGEGSGVKFD----SDAIATPPAADAKASADDEDDDDDMDLFGEETEEEK 120
           I AL+R S    EG GV  +    ++A+ATPP AD+KA+A ++DDDDD+DLFGEETEEEK
Sbjct: 61  IDALLRISGVSEEGCGVTVEGFAPAEAVATPPVADSKAAAAEDDDDDDVDLFGEETEEEK 120

Query: 121 KAAEERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLV 180
           KAAEERAAAVKAS KKKESGKSSVL+DIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLV
Sbjct: 121 KAAEERAAAVKASGKKKESGKSSVLLDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLV 180

Query: 181 PVGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 227
           PVGYGIKKLQIM+TIVDDLVSVD LIEE+LTVEPINE+VQSCDIVAFNKI
Sbjct: 181 PVGYGIKKLQIMMTIVDDLVSVDTLIEEHLTVEPINEYVQSCDIVAFNKI 230

[Close]
BLAST of CSPI01G09470 vs. TrEMBL
Match: A0A0D2PYK4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G205500 PE=3 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 2.4e-91
Identity = 187/230 (81.30%), Postives = 205/230 (89.13%), Query Frame = 1 

Query: 1   MAVSFSDVKSAAGLKKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH 60
           MAV+F+D+ SAAGLKKLDEYLL+RSYISGYQASKDDI VY ALS   SS YVNVSRWY H
Sbjct: 48  MAVTFNDLGSAAGLKKLDEYLLTRSYISGYQASKDDITVYAALSGAPSSSYVNVSRWYKH 107

Query: 61  IAALVRASASFGEGSGVKFD----SDAIATPPAADAKASADDEDDDDDMDLFGEETEEEK 120
           I AL+R S    EG GV  +    ++A+ATPP AD+KA+A ++DDDDD+DLFGEETEEEK
Sbjct: 108 IDALLRISGVSEEGCGVTVEGFAPAEAVATPPVADSKAAAAEDDDDDDVDLFGEETEEEK 167

Query: 121 KAAEERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLV 180
           KAAEERAAAVKAS KKKESGKSSVL+DIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLV
Sbjct: 168 KAAEERAAAVKASGKKKESGKSSVLLDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLV 227

Query: 181 PVGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 227
           PVGYGIKKLQIM+TIVDDLVSVD LIEE+LTVEPINE+VQSCDIVAFNKI
Sbjct: 228 PVGYGIKKLQIMMTIVDDLVSVDTLIEEHLTVEPINEYVQSCDIVAFNKI 277

[Close]
BLAST of CSPI01G09470 vs. TAIR10
Match: AT2G18110.1 (AT2G18110.1 Translation elongation factor EF1B/ribosomal protein S6 family protein)

HSP 1 Score: 327.0 bits (837), Expect = 9.1e-90
Identity = 175/229 (76.42%), Postives = 200/229 (87.34%), Query Frame = 1 

Query: 4   SFSDVKSAAGLKKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNHIAA 63
           +F ++ S +GLKKLDE+LL+RSYI+GYQASKDDI V+ ALSKP +SE+VNVSRW+NHI A
Sbjct: 3   AFPNLNSGSGLKKLDEHLLTRSYITGYQASKDDITVFTALSKPPTSEFVNVSRWFNHIDA 62

Query: 64  LVRASASFGEGSGVKFDS------DAIATPPAADAKASADDEDDDDDMDLFGEETEEEKK 123
           L+R S    EGSGV  +       +A+ATPPAAD+K +A +E+DDDD+DLFGEETEEEKK
Sbjct: 63  LLRISGVSAEGSGVIVEGSSPITEEAVATPPAADSKDTAAEEEDDDDVDLFGEETEEEKK 122

Query: 124 AAEERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVP 183
           AAEERAA+VKAS KKKESGKSSVLMDIKPWDDETDMKKLEEAVRS+QMEGL WGASKLVP
Sbjct: 123 AAEERAASVKASTKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSIQMEGLFWGASKLVP 182

Query: 184 VGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 227
           VGYGIKKL IM TIVDDLVS+D +IEE LTVEPINE+VQSCDIVAFNKI
Sbjct: 183 VGYGIKKLHIMCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231

[Close]
BLAST of CSPI01G09470 vs. TAIR10
Match: AT1G30230.2 (AT1G30230.2 Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6)

HSP 1 Score: 326.2 bits (835), Expect = 1.6e-89
Identity = 174/229 (75.98%), Postives = 200/229 (87.34%), Query Frame = 1 

Query: 4   SFSDVKSAAGLKKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNHIAA 63
           +F ++ S AGLKKLDE+LL+RSYI+GYQASKDDI V+ AL+KP +S+YVN SRWYNHI A
Sbjct: 3   AFPNLNSDAGLKKLDEHLLTRSYITGYQASKDDITVFAALAKPPTSQYVNASRWYNHIDA 62

Query: 64  LVRASASFGEGSGVKFDS------DAIATPPAADAKASADDEDDDDDMDLFGEETEEEKK 123
           L+R S    EGSGV  +       +A+ATPPAAD+K +A DE+DDDD+DLFGEETEEEKK
Sbjct: 63  LLRISGVSAEGSGVIVEGSAPITEEAVATPPAADSKDAAADEEDDDDVDLFGEETEEEKK 122

Query: 124 AAEERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVP 183
           AAEERAA+VKAS KKKESGKSSVL+DIKPWDDETDMKKLEEAV+S+QMEGL WGASKLVP
Sbjct: 123 AAEERAASVKASTKKKESGKSSVLIDIKPWDDETDMKKLEEAVKSIQMEGLFWGASKLVP 182

Query: 184 VGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 227
           VGYGIKKLQI+ TIVDDLVS+D +IEE LTVEPINE+VQSCDIVAFNKI
Sbjct: 183 VGYGIKKLQILCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231

[Close]
BLAST of CSPI01G09470 vs. TAIR10
Match: AT5G19510.1 (AT5G19510.1 Translation elongation factor EF1B/ribosomal protein S6 family protein)

HSP 1 Score: 259.6 bits (662), Expect = 1.8e-69
Identity = 145/226 (64.16%), Postives = 173/226 (76.55%), Query Frame = 1 

Query: 1   MAVSFSDVKSAAGLKKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH 60
           MAV+FSD+ +  G+K ++E+L  ++YISG Q S DD+ VY A+    S  + N S+WY  
Sbjct: 1   MAVTFSDLHTEEGVKSVEEHLAGKTYISGDQLSVDDVKVYAAVPVKPSDAFPNASKWYES 60

Query: 61  IAALVRASASFGEGSGVKFDSDAIATPPAADAKASADDEDDDDDMDLFGEETEEEKKAAE 120
           +A+ +  S   G+  GV+F   A A P A +A+A A   DDDDDMDLFG+ETEEEKKAAE
Sbjct: 61  VASQLAKSFP-GKAVGVQFGGSAAAAP-AVEAEAPAAAADDDDDMDLFGDETEEEKKAAE 120

Query: 121 ERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY 180
           ER AA K + K KESGKSSVLMD+KPWDDETDMKKLEEAVR V+M GL WGASKLVPVGY
Sbjct: 121 EREAAKKDTKKPKESGKSSVLMDVKPWDDETDMKKLEEAVRGVEMPGLFWGASKLVPVGY 180

Query: 181 GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 227
           GIKKL IM TIVDDLVS DNLIE++LT EP NE++QSCDIVAFNKI
Sbjct: 181 GIKKLTIMFTIVDDLVSPDNLIEDFLTSEPNNEYIQSCDIVAFNKI 224

[Close]
BLAST of CSPI01G09470 vs. TAIR10
Match: AT5G12110.1 (AT5G12110.1 Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6)

HSP 1 Score: 245.4 bits (625), Expect = 3.5e-65
Identity = 140/230 (60.87%), Postives = 173/230 (75.22%), Query Frame = 1 

Query: 1   MAVSFSDVKSAAGLKKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH 60
           MAV+FSD+ +  GLK L+E+L  ++YISG Q S DD+ VY A+ +     + N S+WY+ 
Sbjct: 1   MAVTFSDLHTERGLKTLEEHLAGKTYISGDQLSVDDVKVYAAVLENPGDGFPNASKWYDS 60

Query: 61  IAALVRASASFGEGSGVKFDSDAIATP----PAADAKASADDEDDDDDMDLFGEETEEEK 120
           +A+ +  S   G+  GV+     +A P    P  +  A+  D DDDDD+DLF +ETE+EK
Sbjct: 61  VASHLAKSFP-GKADGVRVGG-GVAPPSEAHPHTEEPAADGDGDDDDDIDLFADETEDEK 120

Query: 121 KAAEERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLV 180
           KAAEER AA K + K KESGKSSVL+++KPWDDETDMKKLEEAVRSVQM GL WGASKLV
Sbjct: 121 KAAEEREAAKKDTKKTKESGKSSVLLEVKPWDDETDMKKLEEAVRSVQMPGLTWGASKLV 180

Query: 181 PVGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 227
           PVGYGIKKL IM+TIVDDLVSVDNLIE++LT EP NE++QS DIVAFNKI
Sbjct: 181 PVGYGIKKLTIMMTIVDDLVSVDNLIEDHLTSEPNNEYIQSVDIVAFNKI 228

[Close]
BLAST of CSPI01G09470 vs. NCBI nr
Match: gi|778658084|ref|XP_011652056.1| (PREDICTED: elongation factor 1-delta isoform X1 [Cucumis sativus])

HSP 1 Score: 419.1 bits (1076), Expect = 5.0e-114
Identity = 225/226 (99.56%), Postives = 226/226 (100.00%), Query Frame = 1 

Query: 1   MAVSFSDVKSAAGLKKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH 60
           MAVSFSDVKSAAGL+KLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH
Sbjct: 1   MAVSFSDVKSAAGLQKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH 60

Query: 61  IAALVRASASFGEGSGVKFDSDAIATPPAADAKASADDEDDDDDMDLFGEETEEEKKAAE 120
           IAALVRASASFGEGSGVKFDSDAIATPPAADAKASADDEDDDDDMDLFGEETEEEKKAAE
Sbjct: 61  IAALVRASASFGEGSGVKFDSDAIATPPAADAKASADDEDDDDDMDLFGEETEEEKKAAE 120

Query: 121 ERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY 180
           ERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY
Sbjct: 121 ERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY 180

Query: 181 GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 227
           GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI
Sbjct: 181 GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 226

[Close]
BLAST of CSPI01G09470 vs. NCBI nr
Match: gi|659067479|ref|XP_008439640.1| (PREDICTED: elongation factor 1-delta-like isoform X1 [Cucumis melo])

HSP 1 Score: 406.8 bits (1044), Expect = 2.6e-110
Identity = 218/226 (96.46%), Postives = 222/226 (98.23%), Query Frame = 1 

Query: 1   MAVSFSDVKSAAGLKKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH 60
           MAVS SDVKSAAGLKKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRW+NH
Sbjct: 1   MAVSLSDVKSAAGLKKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWFNH 60

Query: 61  IAALVRASASFGEGSGVKFDSDAIATPPAADAKASADDEDDDDDMDLFGEETEEEKKAAE 120
           I ALVRASASFGEGSGVKFDS+AIATPPAADAKASADD+DDDDDMDLFGEETEEEKKAAE
Sbjct: 61  IEALVRASASFGEGSGVKFDSEAIATPPAADAKASADDDDDDDDMDLFGEETEEEKKAAE 120

Query: 121 ERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY 180
           ERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVR V MEGLLWGASKLVPVGY
Sbjct: 121 ERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRGVHMEGLLWGASKLVPVGY 180

Query: 181 GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 227
           GIKKLQIMLTIVDDLVSVDNLIEE+LTVEPINEHVQSCDIVAFNKI
Sbjct: 181 GIKKLQIMLTIVDDLVSVDNLIEEHLTVEPINEHVQSCDIVAFNKI 226

[Close]
BLAST of CSPI01G09470 vs. NCBI nr
Match: gi|700190642|gb|KGN45846.1| (hypothetical protein Csa_6G014660 [Cucumis sativus])

HSP 1 Score: 384.0 bits (985), Expect = 1.8e-103
Identity = 209/226 (92.48%), Postives = 215/226 (95.13%), Query Frame = 1 

Query: 1   MAVSFSDVKSAAGLKKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH 60
           MAV+F DVKSA+GLKKLDEYLLSRSYISGYQ SKDD+ VYEALSKPVSSEYVNVSRW NH
Sbjct: 43  MAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNH 102

Query: 61  IAALVRASASFGEGSGVKFDSDAIATPPAADAKASADDEDDDDDMDLFGEETEEEKKAAE 120
           I AL+R SA FGEGSGVK D  A+ATPPAADAKA ADD+DDDDDMDLFGEETEEEKKAAE
Sbjct: 103 IEALLRVSAVFGEGSGVKLD--AVATPPAADAKA-ADDDDDDDDMDLFGEETEEEKKAAE 162

Query: 121 ERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY 180
           ERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY
Sbjct: 163 ERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY 222

Query: 181 GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 227
           GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI
Sbjct: 223 GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 265

[Close]
BLAST of CSPI01G09470 vs. NCBI nr
Match: gi|449441238|ref|XP_004138389.1| (PREDICTED: elongation factor 1-delta 2-like [Cucumis sativus])

HSP 1 Score: 384.0 bits (985), Expect = 1.8e-103
Identity = 209/226 (92.48%), Postives = 215/226 (95.13%), Query Frame = 1 

Query: 1   MAVSFSDVKSAAGLKKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH 60
           MAV+F DVKSA+GLKKLDEYLLSRSYISGYQ SKDD+ VYEALSKPVSSEYVNVSRW NH
Sbjct: 1   MAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNH 60

Query: 61  IAALVRASASFGEGSGVKFDSDAIATPPAADAKASADDEDDDDDMDLFGEETEEEKKAAE 120
           I AL+R SA FGEGSGVK D  A+ATPPAADAKA ADD+DDDDDMDLFGEETEEEKKAAE
Sbjct: 61  IEALLRVSAVFGEGSGVKLD--AVATPPAADAKA-ADDDDDDDDMDLFGEETEEEKKAAE 120

Query: 121 ERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY 180
           ERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY
Sbjct: 121 ERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY 180

Query: 181 GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 227
           GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI
Sbjct: 181 GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 223

[Close]
BLAST of CSPI01G09470 vs. NCBI nr
Match: gi|659113881|ref|XP_008456796.1| (PREDICTED: elongation factor 1-delta 2-like isoform X1 [Cucumis melo])

HSP 1 Score: 364.8 bits (935), Expect = 1.1e-97
Identity = 197/226 (87.17%), Postives = 208/226 (92.04%), Query Frame = 1 

Query: 1   MAVSFSDVKSAAGLKKLDEYLLSRSYISGYQASKDDIAVYEALSKPVSSEYVNVSRWYNH 60
           MAV+F DVKSA+GLK+LDEYLLSRSYISGYQ SKDD+ VYEALSKPV SEYVNVSRW NH
Sbjct: 1   MAVAFPDVKSASGLKELDEYLLSRSYISGYQPSKDDVTVYEALSKPVYSEYVNVSRWSNH 60

Query: 61  IAALVRASASFGEGSGVKFDSDAIATPPAADAKASADDEDDDDDMDLFGEETEEEKKAAE 120
           I AL+R SA FGEGSGVK D  A+ATPPAADAK +     DDDDMDLFGEETEEEKKAAE
Sbjct: 61  IEALLRVSAVFGEGSGVKLD--AVATPPAADAKVA-----DDDDMDLFGEETEEEKKAAE 120

Query: 121 ERAAAVKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY 180
           ERAA++KAS+KKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY
Sbjct: 121 ERAASIKASSKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGY 180

Query: 181 GIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEHVQSCDIVAFNKI 227
           GIKKLQIMLTIVDDLVSVDNLIEE+LT EPINEHVQSCDIVAFNKI
Sbjct: 181 GIKKLQIMLTIVDDLVSVDNLIEEHLTAEPINEHVQSCDIVAFNKI 219

The following BLAST results are available for this feature:
BLAST of CSPI01G09470 vs. Swiss-Prot
Match NameE-valueIdentityDescription
EF1D_PIMBR3.1e-9277.88Elongation factor 1-delta OS=Pimpinella brachycarpa PE=2 SV=3[more]
EF1D2_ARATH1.6e-8876.42Elongation factor 1-delta 2 OS=Arabidopsis thaliana GN=At2g18110 PE=1 SV=1[more]
EF1D1_ARATH2.8e-8875.98Elongation factor 1-delta 1 OS=Arabidopsis thaliana GN=At1g30230 PE=1 SV=2[more]
EF1D1_ORYSJ1.0e-8775.98Elongation factor 1-delta 1 OS=Oryza sativa subsp. japonica GN=Os07g0614500 PE=2... [more]
EF1D_BETVU4.0e-8777.06Elongation factor 1-delta OS=Beta vulgaris PE=2 SV=3[more]
BLAST of CSPI01G09470 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LRI8_CUCSA3.5e-11499.56Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050420 PE=3 SV=1[more]
A0A0A0KDI4_CUCSA1.2e-10392.48Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014660 PE=3 SV=1[more]
A0A0D2RIZ3_GOSRA2.4e-9181.30Uncharacterized protein OS=Gossypium raimondii GN=B456_008G205500 PE=3 SV=1[more]
A0A0D2T3X4_GOSRA2.4e-9181.30Uncharacterized protein OS=Gossypium raimondii GN=B456_008G205500 PE=3 SV=1[more]
A0A0D2PYK4_GOSRA2.4e-9181.30Uncharacterized protein OS=Gossypium raimondii GN=B456_008G205500 PE=3 SV=1[more]
BLAST of CSPI01G09470 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G18110.19.1e-9076.42 Translation elongation factor EF1B/ribosomal protein S6 family prot... [more]
AT1G30230.21.6e-8975.98 Glutathione S-transferase, C-terminal-like;Translation elongation f... [more]
AT5G19510.11.8e-6964.16 Translation elongation factor EF1B/ribosomal protein S6 family prot... [more]
AT5G12110.13.5e-6560.87 Glutathione S-transferase, C-terminal-like;Translation elongation f... [more]
BLAST of CSPI01G09470 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778658084|ref|XP_011652056.1|5.0e-11499.56PREDICTED: elongation factor 1-delta isoform X1 [Cucumis sativus][more]
gi|659067479|ref|XP_008439640.1|2.6e-11096.46PREDICTED: elongation factor 1-delta-like isoform X1 [Cucumis melo][more]
gi|700190642|gb|KGN45846.1|1.8e-10392.48hypothetical protein Csa_6G014660 [Cucumis sativus][more]
gi|449441238|ref|XP_004138389.1|1.8e-10392.48PREDICTED: elongation factor 1-delta 2-like [Cucumis sativus][more]
gi|659113881|ref|XP_008456796.1|1.1e-9787.17PREDICTED: elongation factor 1-delta 2-like isoform X1 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001326Transl_elong_EF1B_B/D_CS
IPR010987Glutathione-S-Trfase_C-like
IPR014038EF1B_bsu/dsu_GNE
IPR014717Transl_elong_EF1B/ribosomal_S6
Vocabulary: Molecular Function
TermDefinition
GO:0003746translation elongation factor activity
Vocabulary: Cellular Component
TermDefinition
GO:0005853eukaryotic translation elongation factor 1 complex
Vocabulary: Biological Process
TermDefinition
GO:0006414translational elongation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0006414 translational elongation
biological_process GO:0008150 biological_process
cellular_component GO:0005853 eukaryotic translation elongation factor 1 complex
cellular_component GO:0005840 ribosome
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0008568 microtubule-severing ATPase activity
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G09470.1CSPI01G09470.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001326Translation elongation factor EF1B, beta/delta chains, conserved sitePROSITEPS00824EF1BD_1coord: 101..109
scor
IPR001326Translation elongation factor EF1B, beta/delta chains, conserved sitePROSITEPS00825EF1BD_2coord: 215..226
scor
IPR010987Glutathione S-transferase, C-terminal-likeGENE3DG3DSA:1.20.1050.10coord: 12..64
score: 7.
IPR010987Glutathione S-transferase, C-terminal-likeunknownSSF47616GST C-terminal domain-likecoord: 9..65
score: 3.08
IPR014038Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domainPFAMPF00736EF1_GNEcoord: 139..226
score: 1.1
IPR014038Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domainSMARTSM00888EF1_GNE_2coord: 137..226
score: 7.4
IPR014038Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domainunknownSSF54984eEF-1beta-likecoord: 134..226
score: 1.03
IPR014717Translation elongation factor EF1B/ribosomal protein S6GENE3DG3DSA:3.30.70.60coord: 131..226
score: 1.7
NoneNo IPR availableunknownCoilCoilcoord: 109..129
scor
NoneNo IPR availablePANTHERPTHR11595ELONGATION FACTOR 1-BETAcoord: 1..226
score: 9.3E
NoneNo IPR availablePANTHERPTHR11595:SF27SUBFAMILY NOT NAMEDcoord: 1..226
score: 9.3E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI01G09470Cla002613Watermelon (97103) v1cpiwmB010
CSPI01G09470Csa1G050420Cucumber (Chinese Long) v2cpicuB000
CSPI01G09470MELO3C002355Melon (DHL92) v3.5.1cpimeB024
CSPI01G09470ClCG03G003700Watermelon (Charleston Gray)cpiwcgB038
CSPI01G09470Lsi02G004990Bottle gourd (USVL1VR-Ls)cpilsiB021
CSPI01G09470MELO3C002355.2Melon (DHL92) v3.6.1cpimedB023
CSPI01G09470CsaV3_1G009580Cucumber (Chinese Long) v3cpicucB001
CSPI01G09470Cla97C03G054840Watermelon (97103) v2cpiwmbB032
CSPI01G09470Bhi08G001222Wax gourdcpiwgoB032
CSPI01G09470Cucsa.392030Cucumber (Gy14) v1cgycpiB576
CSPI01G09470CmaCh18G003220Cucurbita maxima (Rimu)cmacpiB401
CSPI01G09470CmoCh18G002110Cucurbita moschata (Rifu)cmocpiB383
CSPI01G09470Cp4.1LG09g09650Cucurbita pepo (Zucchini)cpecpiB025
CSPI01G09470CsGy1G009520Cucumber (Gy14) v2cgybcpiB001
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI01G09470Wild cucumber (PI 183967)cpicpiB003
CSPI01G09470Wild cucumber (PI 183967)cpicpiB008
CSPI01G09470Cucumber (Gy14) v1cgycpiB230
CSPI01G09470Cucurbita maxima (Rimu)cmacpiB063
CSPI01G09470Cucurbita maxima (Rimu)cmacpiB103
CSPI01G09470Cucurbita maxima (Rimu)cmacpiB206
CSPI01G09470Cucurbita moschata (Rifu)cmocpiB056
CSPI01G09470Cucurbita moschata (Rifu)cmocpiB098
CSPI01G09470Cucurbita moschata (Rifu)cmocpiB193
CSPI01G09470Cucumber (Chinese Long) v2cpicuB010
CSPI01G09470Melon (DHL92) v3.5.1cpimeB052
CSPI01G09470Watermelon (Charleston Gray)cpiwcgB075
CSPI01G09470Watermelon (97103) v1cpiwmB094
CSPI01G09470Cucurbita pepo (Zucchini)cpecpiB359
CSPI01G09470Cucurbita pepo (Zucchini)cpecpiB517
CSPI01G09470Cucurbita pepo (Zucchini)cpecpiB652
CSPI01G09470Bottle gourd (USVL1VR-Ls)cpilsiB068
CSPI01G09470Melon (DHL92) v3.6.1cpimedB046
CSPI01G09470Cucumber (Gy14) v2cgybcpiB012
CSPI01G09470Cucumber (Gy14) v2cgybcpiB052
CSPI01G09470Silver-seed gourdcarcpiB0398
CSPI01G09470Silver-seed gourdcarcpiB0531
CSPI01G09470Silver-seed gourdcarcpiB1041
CSPI01G09470Cucumber (Chinese Long) v3cpicucB014
CSPI01G09470Cucumber (Chinese Long) v3cpicucB022
CSPI01G09470Watermelon (97103) v2cpiwmbB072