CsaV3_1G006970 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G006970
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	DUF599 domain-containing protein
Location	chr1 : 4415106 .. 4416799 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTGAAAGGTCTTGAATATTTAATGGTTCCGCTTGGCTTTGCGGTGCTGGTGAGCTACCATCTTTGGCTCATAATCACCATTTACAGGAGGCCTAAAAGAACAGTAATCGGAATCAACGCTGAGTCTCGCAGACAATGGGTCTCCACCATGATTTCAGTGAGTGCCTCTCGTCACTCTTTTCTTCCATGTGTGTCAAATTGATGCGACCCCAGGCACGCGCCTAAGGTGAGAGGCGAGGCGAGGCGCCGAGGGGCCTATGAGCCTCTTGGAATGCCAAGGCGAGGCTCTTCAATCATGCAGTCGCCTTCGCCTTTGTGATTAAGTTTTCTTTATTATTTTCTTAGAAAACAAAATATTTGGCCACAGCCCACGTCAAGACTTTCAATTACTAAAACTTCAGAACTCGGTGGCTTCTTTCAAGTTCCACCGCTTCGATTTCTTCTTCTTCTTTTAGCTTCTATTTCTTCTCCTTCGTCGAAACATCAAGTTCTTTAATGTTTAGGTTGTTTCGCATTCAAGAGAGTGTGGCCTTGAGGTGACTCAATTCACTACAACAAATTCTTCTCTTATTTTATATCTGTTCATAAAATAAAAACGATACAAGTGAGTGAAAACTAGTATGAAATTCAAAATTTGAAACTGAGAACAACGTTTAGAGTTCTTGTTTATTTTTACAGGTCTTATGATATCTACGATGGCAATATTGTCTAGTTCTGAGGATTACAAACATTTTTTTGTCCTCTCTATAGATAGAGATTTAAGTGGTTCCATTTGTGTCAAGATGAAAGAACTTGTTTCATTACATTAAGCTTTCACATACACTTCTAAATGATAGACAACTTGTTAGTCCGGAAATTATATTGAATAAACTAATTAATACTCAGAAGGGTAGAATTTACTTTTAAATTTTATGGACTTGAGAAGTCATTTTGTCCTCTTCTCTCCTACTTCAGTGGAGGTGGAGGAGGAGAGAAACTTTCATGGCTGACTAAACTACTTGAGTGATCTTGTTTAGGACCCTGCAAAGAATGGTGTTCTTGCTGTTCAAACCATACGAAACAACATCATGGCTTCTACGCTTATGGCCACGACGACGATCACCATTGGCTCATTGATTAGTGTTTTTGTGAGCAGCACATCAAGTACTGGAAAGTACCGTTACATTGTTTTGTGTTTTCTCGTTGCCTTCCTTTGCAATGTGCAGTCTATTAGATACTATGCTCATGCCAGCTTCTTAGTCACTTTGCCTGATGGTGAAGGAAGAAAAGAGTATCTTGCTGCTATATTGAATCGAGGAAGTTTATTTTGGTCGCTCGGATTACGAGCTTTCTATTTCACAATTCCTCTCTTCCTCTGGATCTTTGGTCCTCTTTCAATGTTTGCGAGTTGTTATCTTATAACATTTGTTCTTTACTTCTTGGACTATACTGGAAGTTCCAACTACGATCCTTATGAATATGTACAAAAGGAAGAAGCGAACAACAGTGACATTGAATCTGTTGGTCAATCAAGGTGAGTGCTTTCATATGTGTAATTGATCTTAATATCTAGCTCTATGATTTTGCATATTGACCATGGTTTTCTAAATGGATGTTCTAAATTTTTTTCGGCTCAGGGGAATCAATTTTGCAGCAAACTCTTCTCTTCAATCTCCTCTACTTGCAAGTCACAATATGACATCAACATAA

mRNA sequence

ATGGAAGTGAAAGGTCTTGAATATTTAATGGTTCCGCTTGGCTTTGCGGTGCTGGTGAGCTACCATCTTTGGCTCATAATCACCATTTACAGGAGGCCTAAAAGAACAGTAATCGGAATCAACGCTGAGTCTCGCAGACAATGGGTCTCCACCATGATTTCAGACCCTGCAAAGAATGGTGTTCTTGCTGTTCAAACCATACGAAACAACATCATGGCTTCTACGCTTATGGCCACGACGACGATCACCATTGGCTCATTGATTAGTGTTTTTGTGAGCAGCACATCAAGTACTGGAAAGTACCGTTACATTGTTTTGTGTTTTCTCGTTGCCTTCCTTTGCAATGTGCAGTCTATTAGATACTATGCTCATGCCAGCTTCTTAGTCACTTTGCCTGATGGTGAAGGAAGAAAAGAGTATCTTGCTGCTATATTGAATCGAGGAAGTTTATTTTGGTCGCTCGGATTACGAGCTTTCTATTTCACAATTCCTCTCTTCCTCTGGATCTTTGGTCCTCTTTCAATGTTTGCGAGTTGTTATCTTATAACATTTGTTCTTTACTTCTTGGACTATACTGGAAGTTCCAACTACGATCCTTATGAATATGTACAAAAGGAAGAAGCGAACAACAGTGACATTGAATCTGTTGGTCAATCAAGGGGAATCAATTTTGCAGCAAACTCTTCTCTTCAATCTCCTCTACTTGCAAGTCACAATATGACATCAACATAA

Coding sequence (CDS)

ATGGAAGTGAAAGGTCTTGAATATTTAATGGTTCCGCTTGGCTTTGCGGTGCTGGTGAGCTACCATCTTTGGCTCATAATCACCATTTACAGGAGGCCTAAAAGAACAGTAATCGGAATCAACGCTGAGTCTCGCAGACAATGGGTCTCCACCATGATTTCAGACCCTGCAAAGAATGGTGTTCTTGCTGTTCAAACCATACGAAACAACATCATGGCTTCTACGCTTATGGCCACGACGACGATCACCATTGGCTCATTGATTAGTGTTTTTGTGAGCAGCACATCAAGTACTGGAAAGTACCGTTACATTGTTTTGTGTTTTCTCGTTGCCTTCCTTTGCAATGTGCAGTCTATTAGATACTATGCTCATGCCAGCTTCTTAGTCACTTTGCCTGATGGTGAAGGAAGAAAAGAGTATCTTGCTGCTATATTGAATCGAGGAAGTTTATTTTGGTCGCTCGGATTACGAGCTTTCTATTTCACAATTCCTCTCTTCCTCTGGATCTTTGGTCCTCTTTCAATGTTTGCGAGTTGTTATCTTATAACATTTGTTCTTTACTTCTTGGACTATACTGGAAGTTCCAACTACGATCCTTATGAATATGTACAAAAGGAAGAAGCGAACAACAGTGACATTGAATCTGTTGGTCAATCAAGGGGAATCAATTTTGCAGCAAACTCTTCTCTTCAATCTCCTCTACTTGCAAGTCACAATATGACATCAACATAA

Protein sequence

MEVKGLEYLMVPLGFAVLVSYHLWLIITIYRRPKRTVIGINAESRRQWVSTMISDPAKNGVLAVQTIRNNIMASTLMATTTITIGSLISVFVSSTSSTGKYRYIVLCFLVAFLCNVQSIRYYAHASFLVTLPDGEGRKEYLAAILNRGSLFWSLGLRAFYFTIPLFLWIFGPLSMFASCYLITFVLYFLDYTGSSNYDPYEYVQKEEANNSDIESVGQSRGINFAANSSLQSPLLASHNMTST

Homology

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BLAST of CsaV3_1G006970 vs. NCBI nr
Match: XP_004137490.1 (PREDICTED: uncharacterized protein LOC101217102 [Cucumis sativus] >KGN64154.1 hypothetical protein Csa_1G042630 [Cucumis sativus])

HSP 1 Score: 466.5 bits (1199), Expect = 5.7e-128
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 1   MEVKGLEYLMVPLGFAVLVSYHLWLIITIYRRPKRTVIGINAESRRQWVSTMISDPAKNG 60
           MEVKGLEYLMVPLGFAVLVSYHLWLIITIYRRPKRTVIGINAESRRQWVSTMISDPAKNG
Sbjct: 1   MEVKGLEYLMVPLGFAVLVSYHLWLIITIYRRPKRTVIGINAESRRQWVSTMISDPAKNG 60

Query: 61  VLAVQTIRNNIMASTLMATTTITIGSLISVFVSSTSSTGKYRYIVLCFLVAFLCNVQSIR 120
           VLAVQTIRNNIMASTLMATTTITIGSLISVFVSSTSSTGKYRYIVLCFLVAFLCNVQSIR
Sbjct: 61  VLAVQTIRNNIMASTLMATTTITIGSLISVFVSSTSSTGKYRYIVLCFLVAFLCNVQSIR 120

Query: 121 YYAHASFLVTLPDGEGRKEYLAAILNRGSLFWSLGLRAFYFTIPLFLWIFGPLSMFASCY 180
           YYAHASFLVTLPDGEGRKEYLAAILNRGSLFWSLGLRAFYFTIPLFLWIFGPLSMFASCY
Sbjct: 121 YYAHASFLVTLPDGEGRKEYLAAILNRGSLFWSLGLRAFYFTIPLFLWIFGPLSMFASCY 180

Query: 181 LITFVLYFLDYTGSSNYDPYEYVQKEEANNSDIESVGQSRGINFAANSSLQSPLLASHNM 240
           LITFVLYFLDYTGSSNYDPYEYVQKEEANNSDIESVGQSRGINFAANSSLQSPLLASHNM
Sbjct: 181 LITFVLYFLDYTGSSNYDPYEYVQKEEANNSDIESVGQSRGINFAANSSLQSPLLASHNM 240

Query: 241 TST 244
           TST
Sbjct: 241 TST 243

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BLAST of CsaV3_1G006970 vs. NCBI nr
Match: XP_008461857.1 (PREDICTED: uncharacterized protein LOC103500327 [Cucumis melo])

HSP 1 Score: 446.8 bits (1148), Expect = 4.7e-122
Identity = 231/242 (95.45%), Postives = 236/242 (97.52%), Query Frame = 0


Query: 1   MEVKGLEYLMVPLGFAVLVSYHLWLIITIYRRPKRTVIGINAESRRQWVSTMISDPAKNG 60
           MEVK LE+ MVPLGFAVLVSYHLWLIITIYRRPKRTVIG+NAESRRQWVSTMISDPAKNG
Sbjct: 1   MEVKDLEFFMVPLGFAVLVSYHLWLIITIYRRPKRTVIGVNAESRRQWVSTMISDPAKNG 60

Query: 61  VLAVQTIRNNIMASTLMATTTITIGSLISVFVSSTSSTGKYRYIVLCFLVAFLCNVQSIR 120
           VLAVQTIRNNIMASTLMATTTITIGSLISVFVSSTSSTGKYRYIVLCFLVAFLCNVQSIR
Sbjct: 61  VLAVQTIRNNIMASTLMATTTITIGSLISVFVSSTSSTGKYRYIVLCFLVAFLCNVQSIR 120

Query: 121 YYAHASFLVTLPDGEGRKEYLAAILNRGSLFWSLGLRAFYFTIPLFLWIFGPLSMFASCY 180
           YYAHASFLVTLPDGEGRKEYLAAILNRGSLFWSLGLRAFYFTIPLFLWIFGPLSMFASCY
Sbjct: 121 YYAHASFLVTLPDGEGRKEYLAAILNRGSLFWSLGLRAFYFTIPLFLWIFGPLSMFASCY 180

Query: 181 LITFVLYFLDYTGSSNYDPYEYVQKEEANNSDIESVGQSRGINFAANSSLQSPLLASHNM 240
           LITFVLYFLDYTGSS YDPYEYVQKEEANN+DIESVGQSRG+N   NSSLQSPLLASH+M
Sbjct: 181 LITFVLYFLDYTGSSKYDPYEYVQKEEANNNDIESVGQSRGVNLVENSSLQSPLLASHSM 240

Query: 241 TS 243
           TS
Sbjct: 241 TS 242

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BLAST of CsaV3_1G006970 vs. NCBI nr
Match: XP_023520400.1 (uncharacterized protein LOC111783713 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 397.1 bits (1019), Expect = 4.2e-107
Identity = 204/242 (84.30%), Postives = 217/242 (89.67%), Query Frame = 0


Query: 1   MEVKGLEYLMVPLGFAVLVSYHLWLIITIYRRPKRTVIGINAESRRQWVSTMISDPAKNG 60
           ME+K LEY+MVPLGF VLV YHLWLIITIYR PKRTVIGINAESRRQWV+T++SDP KN 
Sbjct: 1   MEMKHLEYVMVPLGFTVLVGYHLWLIITIYRSPKRTVIGINAESRRQWVATIVSDPEKNA 60

Query: 61  VLAVQTIRNNIMASTLMATTTITIGSLISVFVSSTSSTGKYRYIVLCFLVAFLCNVQSIR 120
           VL VQTIRNNIMASTLMATTTIT+GSLISVFV STSSTGKYRYI+LCFLVAFLCNVQSIR
Sbjct: 61  VLGVQTIRNNIMASTLMATTTITVGSLISVFVGSTSSTGKYRYILLCFLVAFLCNVQSIR 120

Query: 121 YYAHASFLVTLPDGEGRKEYLAAILNRGSLFWSLGLRAFYFTIPLFLWIFGPLSMFASCY 180
           YYAHASFLVTLP GEGRK+YLAAILNRGSLFWS+GLRAFYF IP FLWIFGPLSMF SCY
Sbjct: 121 YYAHASFLVTLPAGEGRKDYLAAILNRGSLFWSIGLRAFYFAIPFFLWIFGPLSMFFSCY 180

Query: 181 LITFVLYFLDYTGSSNYDPYEYVQKEEANNSDIESVGQSRGINFAANSSLQSPLLASHNM 240
           LI FVLYFLD+T +S+YDPY YVQKEE NN DIESVGQS G NF ANS + SPLL  H M
Sbjct: 181 LIVFVLYFLDFTRTSSYDPYGYVQKEEVNNKDIESVGQSGGNNFVANSCIHSPLLEGHIM 240

Query: 241 TS 243
           TS
Sbjct: 241 TS 242

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BLAST of CsaV3_1G006970 vs. NCBI nr
Match: XP_023001060.1 (uncharacterized protein LOC111495313 [Cucurbita maxima])

HSP 1 Score: 394.8 bits (1013), Expect = 2.1e-106
Identity = 203/242 (83.88%), Postives = 217/242 (89.67%), Query Frame = 0


Query: 1   MEVKGLEYLMVPLGFAVLVSYHLWLIITIYRRPKRTVIGINAESRRQWVSTMISDPAKNG 60
           ME+K LEY+MVPLGF VLV YHLWLIITIYR PKRTVIGINAESRRQWV+T++SDP KN 
Sbjct: 1   MEMKHLEYVMVPLGFTVLVGYHLWLIITIYRSPKRTVIGINAESRRQWVATIVSDPEKNA 60

Query: 61  VLAVQTIRNNIMASTLMATTTITIGSLISVFVSSTSSTGKYRYIVLCFLVAFLCNVQSIR 120
           VL VQTIRNNIMASTLMATTTIT+GSLISVFV S+SSTGKYRYI+LCFLVAFLCNVQSIR
Sbjct: 61  VLGVQTIRNNIMASTLMATTTITVGSLISVFVGSSSSTGKYRYILLCFLVAFLCNVQSIR 120

Query: 121 YYAHASFLVTLPDGEGRKEYLAAILNRGSLFWSLGLRAFYFTIPLFLWIFGPLSMFASCY 180
           YYAHASFLVTLP GEGRK+YLAAILNRGSLFWS+GLRAFYF IP FLWIFGPLSMF SCY
Sbjct: 121 YYAHASFLVTLPAGEGRKDYLAAILNRGSLFWSIGLRAFYFAIPFFLWIFGPLSMFFSCY 180

Query: 181 LITFVLYFLDYTGSSNYDPYEYVQKEEANNSDIESVGQSRGINFAANSSLQSPLLASHNM 240
           LI FVLYFLD+T +S+YDPY YVQKEEANN DIESVGQS G NF ANS + SPLL  H  
Sbjct: 181 LIVFVLYFLDFTRTSSYDPYGYVQKEEANNKDIESVGQSGGNNFVANSCIHSPLLEGHIT 240

Query: 241 TS 243
           TS
Sbjct: 241 TS 242

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BLAST of CsaV3_1G006970 vs. NCBI nr
Match: XP_022994262.1 (uncharacterized protein LOC111490049 [Cucurbita maxima])

HSP 1 Score: 393.7 bits (1010), Expect = 4.7e-106
Identity = 206/242 (85.12%), Postives = 219/242 (90.50%), Query Frame = 0


Query: 1   MEVKGLEYLMVPLGFAVLVSYHLWLIITIYRRPKRTVIGINAESRRQWVSTMISDPAKNG 60
           ME K LEY++VPLGFAVLVSYHLWL +TIY RPKRTVIGINAESRRQWVSTMISDP KNG
Sbjct: 1   MERKHLEYVLVPLGFAVLVSYHLWLAVTIYWRPKRTVIGINAESRRQWVSTMISDPMKNG 60

Query: 61  VLAVQTIRNNIMASTLMATTTITIGSLISVFVSSTSSTGKYRYIVLCFLVAFLCNVQSIR 120
           VLAVQ IRNNIMASTLMATTTITIGSL+S FVSSTSSTGKY YIVLCFLVAFLCNVQSIR
Sbjct: 61  VLAVQIIRNNIMASTLMATTTITIGSLLSAFVSSTSSTGKYHYIVLCFLVAFLCNVQSIR 120

Query: 121 YYAHASFLVTLPDGEGRKEYLAAILNRGSLFWSLGLRAFYFTIPLFLWIFGPLSMFASCY 180
           YYAHASFLVTLP GE R +Y A ILNRGSLFWSLGLRAFYF IPLFLWIFGPLSMF S  
Sbjct: 121 YYAHASFLVTLPAGESRMDYFAGILNRGSLFWSLGLRAFYFAIPLFLWIFGPLSMFLSSC 180

Query: 181 LITFVLYFLDYTGSSNYDPYEYVQKEEANNSDIESVGQSRGINFAANSSLQSPLLASHNM 240
           LITFVLYFLD+T +S+YDPYEY+QKEE NN+DIESVGQSRG NFA +S L SPLLAS++M
Sbjct: 181 LITFVLYFLDFTRTSSYDPYEYLQKEEVNNNDIESVGQSRGNNFAVSSRLHSPLLASYSM 240

Query: 241 TS 243
           TS
Sbjct: 241 TS 242

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BLAST of CsaV3_1G006970 vs. TAIR10
Match: AT3G18215.1 (Protein of unknown function, DUF599)

HSP 1 Score: 212.6 bits (540), Expect = 2.7e-55
Identity = 120/232 (51.72%), Postives = 154/232 (66.38%), Query Frame = 0


Query: 4   KGLEYLMVPLGFAVLVSYHLWLIITIYRRPKRTVIGINAESRRQWVSTMISDPAKNGVLA 63
           + L+ ++VP G  V+V+YH+WL+  I  RPK TVI +NAESRRQWV +M+++P KNG LA
Sbjct: 5   ESLDLVLVPTGLVVMVAYHVWLVYAILHRPKLTVIALNAESRRQWVFSMMTEPLKNGTLA 64

Query: 64  VQTIRNNIMASTLMATTTITIGSLISVFVSSTSSTG------------------KYRYIV 123
           VQTIRNNIMASTL+ATT IT+ S+I VFVS++SS+                   K   I+
Sbjct: 65  VQTIRNNIMASTLLATTAITLCSIIGVFVSNSSSSKSTATNLIYGSKSPRLASFKNFAIL 124

Query: 124 LCFLVAFLCNVQSIRYYAHASFLVTLPDGEGRK---EYLAAILNRGSLFWSLGLRAFYFT 183
           +CFL+AFLCN+QSIRYYAH SFLVT+P   G++   EY++  LNR S FWSLGLRAFYF+
Sbjct: 125 ICFLMAFLCNIQSIRYYAHVSFLVTVPVSRGKREHCEYVSRNLNRASYFWSLGLRAFYFS 184

Query: 184 IPLFLWIFGPLSMFASCYLITFVLYFLDYTGSSNYDPYEYVQKEEANNSDIE 215
            PLFLW FGP+ MF           FLD T S     +    +E A++ D E
Sbjct: 185 FPLFLWTFGPIPMFVCXXXXXXXXXFLDTTTSFTRHLHSQSFRETADSMDGE 236

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BLAST of CsaV3_1G006970 vs. TAIR10
Match: AT5G24600.1 (Protein of unknown function, DUF599)

HSP 1 Score: 204.1 bits (518), Expect = 9.6e-53
Identity = 118/228 (51.75%), Postives = 152/228 (66.67%), Query Frame = 0


Query: 1   MEVKGLEYLMVPLGFAVLVSYHLWLIITIYRRPKRTVIGINAESRRQWVSTMISDPAKNG 60
           M+ + L+Y +VPLG A++V YHLWL+  I  RP  TV+G+NA +RR WV  M+ D +KNG
Sbjct: 1   MKREYLDYTLVPLGLALMVFYHLWLLYRIIHRPSSTVVGLNAFNRRLWVQAMMEDSSKNG 60

Query: 61  VLAVQTIRNNIMASTLMATTTITIGSLISVFVSSTSSTG------------------KYR 120
           VLAVQT+RNNIMASTL+A+T I + SLI+V +  TS+TG                  K+ 
Sbjct: 61  VLAVQTLRNNIMASTLLASTAIMLCSLIAVLM--TSATGERSVWFVFGDKSDRAFSLKFF 120

Query: 121 YIVLCFLVAFLCNVQSIRYYAHASFLVTLP---------DGEG------RKEYLAAILNR 180
            I++CFLVAFL NVQSIRYY+HAS L+ +P          G G       ++Y+AA +NR
Sbjct: 121 AILVCFLVAFLLNVQSIRYYSHASILINVPFKQLMAVSSGGRGNGSLMINQDYVAATVNR 180

Query: 181 GSLFWSLGLRAFYFTIPLFLWIFGPLSMFASCYLITFVLYFLDYTGSS 196
           GS FWSLGLRAFYF+ PLFLWIFGP+ MF +C ++   LYFLD T  S
Sbjct: 181 GSYFWSLGLRAFYFSSPLFLWIFGPIPMFITCCVLVCSLYFLDLTFDS 226

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BLAST of CsaV3_1G006970 vs. TAIR10
Match: AT4G31330.1 (Protein of unknown function, DUF599)

HSP 1 Score: 114.4 bits (285), Expect = 1.0e-25
Identity = 78/213 (36.62%), Postives = 119/213 (55.87%), Query Frame = 0


Query: 6   LEYLMVPLGFAVLVSYHLWLIITIYRRPKRTVIGINAESRRQWVSTMISDPAKNGVLAVQ 65
           L+ ++VPLG  V  SYH++L   +  +P  T+IG NA +RR WV+++I D  K  +LAVQ
Sbjct: 8   LDVILVPLGLMVYASYHVYLWHKLRTQPLTTIIGTNARARRFWVASIIKDNDKKNILAVQ 67

Query: 66  TIRNNIMASTLMATTTITIGSLISVFVSSTSSTG------------------KYRYIVLC 125
           T+RN IM STLMATT+I + + ++  +SST +                    KY  I+  
Sbjct: 68  TLRNCIMGSTLMATTSILLCAGLAAVLSSTYAVKKPLNDAVFGARGEFMVALKYVTILTI 127

Query: 126 FLVAFLCNVQSIRYYAHASFLVTLP------DGE---GRKEYLAAILNRGSLFWSLGLRA 185
           FL +F  +  SIR+    + L+  P      + E     +EY+A +L RG +  ++G R 
Sbjct: 128 FLFSFFSHSLSIRFINQVNILINTPFPPEELEDEMMMTAEEYVAELLERGFILNTVGNRL 187

Query: 186 FYFTIPLFLWIFGPLSMFASCYLITFVLYFLDY 192
           FY  +PL LWIFGP+ +F    ++  +LY LD+
Sbjct: 188 FYAALPLMLWIFGPVLVFLCSVVMVPLLYNLDF 220

[Close]

BLAST of CsaV3_1G006970 vs. TAIR10
Match: AT5G24790.1 (Protein of unknown function, DUF599)

HSP 1 Score: 107.5 bits (267), Expect = 1.2e-23
Identity = 69/217 (31.80%), Postives = 115/217 (53.00%), Query Frame = 0


Query: 6   LEYLMVPLGFAVLVSYHLWLIITIYRRPKRTVIGINAESRRQWVSTMISDPAKNGVLAVQ 65
           L+ ++VPL   +++ YH++L   +   P  T++GIN+  RR W+S MI D  K  +LAVQ
Sbjct: 8   LDAILVPLALMMMICYHIYLSFMVRTNPFSTLLGINSHGRRIWISAMIKDNQKTNILAVQ 67

Query: 66  TIRNNIMASTLMATTTITIGSLISVFVSSTSS------------------TGKYRYIVLC 125
           T+RN +M +TLMATT + + + ++  +SST S                  + KY  I+  
Sbjct: 68  TLRNIVMGATLMATTCVLLCAGLAAVLSSTYSIKKPLNDAVFGAHGDFAISIKYLTILTI 127

Query: 126 FLVAFLCNVQSIRYYAHASFLVTLPDGEGR--------KEYLAAILNRGSLFWSLGLRAF 185
           F+ +F  +  SIR+    + LV +P+ +           E+++ +  +G    ++G R F
Sbjct: 128 FIFSFFFHSLSIRFLNQVAILVNIPNLDPNPSGCVFLTSEHVSEMFEKGIFLNTVGNRLF 187

Query: 186 YFTIPLFLWIFGPLSMFASCYLITFVLYFLDYTGSSN 197
           Y    L LWIFGP+ +F S  ++  VL  LD+   +N
Sbjct: 188 YAGFSLMLWIFGPILVFFSVLVMVLVLSHLDFVSRNN 224

[Close]

BLAST of CsaV3_1G006970 vs. TAIR10
Match: AT5G10580.1 (Protein of unknown function, DUF599)

HSP 1 Score: 106.7 bits (265), Expect = 2.1e-23
Identity = 75/215 (34.88%), Postives = 112/215 (52.09%), Query Frame = 0


Query: 6   LEYLMVPLGFAVLVSYHLWLIITIYRRPKRTVIGINAESRRQWVSTMISDPAKNGVLAVQ 65
           L+ ++VP    ++  YH++L   +   P  T++G N+ +RR WV+ ++ D  K  +LAVQ
Sbjct: 8   LDAVLVPSALLMMFGYHIYLWYKVRTDPFCTIVGTNSRARRSWVAAIMKDNEKKNILAVQ 67

Query: 66  TIRNNIMASTLMATTTITIGSLISVFVSSTSSTG------------------KYRYIVLC 125
           T+RN IM  TLMATT I + + ++  +SST S                    KY  I+  
Sbjct: 68  TLRNTIMGGTLMATTCILLCAGLAAVLSSTYSIKKPLNDAVYGAHGDFTVALKYVTILTI 127

Query: 126 FLVAFLCNVQSIRYYAHASFLVTLP-----DGEGR------KEYLAAILNRGSLFWSLGL 185
           FL AF  +  SIR+    + L+  P     D  G        EY++ +L +  L  ++G 
Sbjct: 128 FLFAFFSHSLSIRFINQVNILINAPQEPFSDDFGEIGSFVTPEYVSELLEKAFLLNTVGN 187

Query: 186 RAFYFTIPLFLWIFGPLSMFASCYLITFVLYFLDY 192
           R FY  +PL LWIFGP+ +F S  LI  VLY LD+
Sbjct: 188 RLFYMGLPLMLWIFGPVLVFLSSALIIPVLYNLDF 222

[Close]

BLAST of CsaV3_1G006970 vs. TrEMBL
Match: tr|A0A0A0LT21|A0A0A0LT21_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042630 PE=4 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 3.8e-128
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 1   MEVKGLEYLMVPLGFAVLVSYHLWLIITIYRRPKRTVIGINAESRRQWVSTMISDPAKNG 60
           MEVKGLEYLMVPLGFAVLVSYHLWLIITIYRRPKRTVIGINAESRRQWVSTMISDPAKNG
Sbjct: 1   MEVKGLEYLMVPLGFAVLVSYHLWLIITIYRRPKRTVIGINAESRRQWVSTMISDPAKNG 60

Query: 61  VLAVQTIRNNIMASTLMATTTITIGSLISVFVSSTSSTGKYRYIVLCFLVAFLCNVQSIR 120
           VLAVQTIRNNIMASTLMATTTITIGSLISVFVSSTSSTGKYRYIVLCFLVAFLCNVQSIR
Sbjct: 61  VLAVQTIRNNIMASTLMATTTITIGSLISVFVSSTSSTGKYRYIVLCFLVAFLCNVQSIR 120

Query: 121 YYAHASFLVTLPDGEGRKEYLAAILNRGSLFWSLGLRAFYFTIPLFLWIFGPLSMFASCY 180
           YYAHASFLVTLPDGEGRKEYLAAILNRGSLFWSLGLRAFYFTIPLFLWIFGPLSMFASCY
Sbjct: 121 YYAHASFLVTLPDGEGRKEYLAAILNRGSLFWSLGLRAFYFTIPLFLWIFGPLSMFASCY 180

Query: 181 LITFVLYFLDYTGSSNYDPYEYVQKEEANNSDIESVGQSRGINFAANSSLQSPLLASHNM 240
           LITFVLYFLDYTGSSNYDPYEYVQKEEANNSDIESVGQSRGINFAANSSLQSPLLASHNM
Sbjct: 181 LITFVLYFLDYTGSSNYDPYEYVQKEEANNSDIESVGQSRGINFAANSSLQSPLLASHNM 240

Query: 241 TST 244
           TST
Sbjct: 241 TST 243

[Close]

BLAST of CsaV3_1G006970 vs. TrEMBL
Match: tr|A0A1S3CFP7|A0A1S3CFP7_CUCME (uncharacterized protein LOC103500327 OS=Cucumis melo OX=3656 GN=LOC103500327 PE=4 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 3.1e-122
Identity = 231/242 (95.45%), Postives = 236/242 (97.52%), Query Frame = 0


Query: 1   MEVKGLEYLMVPLGFAVLVSYHLWLIITIYRRPKRTVIGINAESRRQWVSTMISDPAKNG 60
           MEVK LE+ MVPLGFAVLVSYHLWLIITIYRRPKRTVIG+NAESRRQWVSTMISDPAKNG
Sbjct: 1   MEVKDLEFFMVPLGFAVLVSYHLWLIITIYRRPKRTVIGVNAESRRQWVSTMISDPAKNG 60

Query: 61  VLAVQTIRNNIMASTLMATTTITIGSLISVFVSSTSSTGKYRYIVLCFLVAFLCNVQSIR 120
           VLAVQTIRNNIMASTLMATTTITIGSLISVFVSSTSSTGKYRYIVLCFLVAFLCNVQSIR
Sbjct: 61  VLAVQTIRNNIMASTLMATTTITIGSLISVFVSSTSSTGKYRYIVLCFLVAFLCNVQSIR 120

Query: 121 YYAHASFLVTLPDGEGRKEYLAAILNRGSLFWSLGLRAFYFTIPLFLWIFGPLSMFASCY 180
           YYAHASFLVTLPDGEGRKEYLAAILNRGSLFWSLGLRAFYFTIPLFLWIFGPLSMFASCY
Sbjct: 121 YYAHASFLVTLPDGEGRKEYLAAILNRGSLFWSLGLRAFYFTIPLFLWIFGPLSMFASCY 180

Query: 181 LITFVLYFLDYTGSSNYDPYEYVQKEEANNSDIESVGQSRGINFAANSSLQSPLLASHNM 240
           LITFVLYFLDYTGSS YDPYEYVQKEEANN+DIESVGQSRG+N   NSSLQSPLLASH+M
Sbjct: 181 LITFVLYFLDYTGSSKYDPYEYVQKEEANNNDIESVGQSRGVNLVENSSLQSPLLASHSM 240

Query: 241 TS 243
           TS
Sbjct: 241 TS 242

[Close]

BLAST of CsaV3_1G006970 vs. TrEMBL
Match: tr|A0A2P6P224|A0A2P6P224_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0179261 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.7e-67
Identity = 147/238 (61.76%), Postives = 177/238 (74.37%), Query Frame = 0


Query: 1   MEVKGLEYLMVPLGFAVLVSYHLWLIITIYRRPKRTVIGINAESRRQWVSTMISDPAKNG 60
           ME + L+Y++VPLG  VL +YH+WL+IT+ R P RTVIG+NA+SR QWV +M+SDP KNG
Sbjct: 1   MEEEALDYVLVPLGLFVLGTYHVWLLITVLRHPIRTVIGLNAQSRHQWVLSMMSDPLKNG 60

Query: 61  VLAVQTIRNNIMASTLMATTTITIGSLISVFVSSTSSTG-----------------KYRY 120
           VLAVQTIRNNIMASTL+ATT IT+ SLISVFVSSTS++G                 KY  
Sbjct: 61  VLAVQTIRNNIMASTLLATTAITLSSLISVFVSSTSNSGNTSKLIYGNKTATLSSIKYFS 120

Query: 121 IVLCFLVAFLCNVQSIRYYAHASFLVTLPDGEGRK---EYLAAILNRGSLFWSLGLRAFY 180
           I+LCFLVAFLCNVQSIRYYAH SFL T+P  +GRK   EY+A  LNRGS FWSLGLRAFY
Sbjct: 121 ILLCFLVAFLCNVQSIRYYAHVSFLATVPTWQGRKDCIEYVARNLNRGSYFWSLGLRAFY 180

Query: 181 FTIPLFLWIFGPLSMFASCYLITFVLYFLDYTGSSNYDPYEYVQKEEANNSDIESVGQ 219
           F+ PLFLWIFGP+ MFA   +I+ VLYFLD T S     + +  KE   ++D+ES+GQ
Sbjct: 181 FSFPLFLWIFGPIPMFACSCVISCVLYFLDTTTSFTRHLHSHSIKEVKTDNDLESLGQ 238

[Close]

BLAST of CsaV3_1G006970 vs. TrEMBL
Match: tr|V4UFS3|V4UFS3_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10009323mg PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.0e-65
Identity = 142/240 (59.17%), Postives = 172/240 (71.67%), Query Frame = 0


Query: 1   MEVKGLEYLMVPLGFAVLVSYHLWLIITIYRRPKRTVIGINAESRRQWVSTMISDPAKNG 60
           ME K L+Y+++P G  V+  YH+WL+ TI R P+R+VIG+NAESR QWV ++++DP KNG
Sbjct: 1   MEEKKLDYVLIPTGLLVMGVYHIWLLYTILRFPRRSVIGLNAESRHQWVHSIMTDPLKNG 60

Query: 61  VLAVQTIRNNIMASTLMATTTITIGSLISVFVSSTSSTG------------------KYR 120
            LAVQTIRNNIMASTL+ATT IT+ SLI VFVSSTSS+G                  KY 
Sbjct: 61  TLAVQTIRNNIMASTLLATTAITLSSLIGVFVSSTSSSGNTASEIIYGNKTSILSSIKYF 120

Query: 121 YIVLCFLVAFLCNVQSIRYYAHASFLVTLPDGEGRK---EYLAAILNRGSLFWSLGLRAF 180
            I+LCFLVAFLCNVQSIRYYAH SFLVTLP  +G +   EY+A  LNRGS FWSLGLRAF
Sbjct: 121 TILLCFLVAFLCNVQSIRYYAHVSFLVTLPTSKGNRNYIEYVARNLNRGSFFWSLGLRAF 180

Query: 181 YFTIPLFLWIFGPLSMFASCYLITFVLYFLDYTGSSNYDPYEYVQKEEANNSDIESVGQS 220
           Y + PLFLWIFGP+ MF  C  ++F+LYFLD T S   + + +  KEEA   D+ES  QS
Sbjct: 181 YLSFPLFLWIFGPIPMFVCCCTMSFLLYFLDTTSSFTRELHSHSFKEEAKLDDLESPVQS 240

[Close]

BLAST of CsaV3_1G006970 vs. TrEMBL
Match: tr|A0A2H5QG65|A0A2H5QG65_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_227170 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 4.5e-65
Identity = 142/240 (59.17%), Postives = 171/240 (71.25%), Query Frame = 0


Query: 1   MEVKGLEYLMVPLGFAVLVSYHLWLIITIYRRPKRTVIGINAESRRQWVSTMISDPAKNG 60
           ME K L+Y+++P G  V+  YH+WL+ TI R P+R+VIG+NAESR QWV ++++DP KNG
Sbjct: 1   MEEKKLDYVLIPTGLLVMGVYHIWLLYTILRFPRRSVIGLNAESRHQWVHSIMTDPLKNG 60

Query: 61  VLAVQTIRNNIMASTLMATTTITIGSLISVFVSSTSSTG------------------KYR 120
            LAVQTIRNNIMASTL+ATT IT+ SLI VFVSSTSS+G                  KY 
Sbjct: 61  TLAVQTIRNNIMASTLLATTAITLSSLIGVFVSSTSSSGNTASEIIYGNKTSILSSIKYF 120

Query: 121 YIVLCFLVAFLCNVQSIRYYAHASFLVTLPDGEGRK---EYLAAILNRGSLFWSLGLRAF 180
            I+LCFLVAFLCNVQSIRYYAH SFLVTLP  +G     EY+A  LNRGS FWSLGLRAF
Sbjct: 121 TILLCFLVAFLCNVQSIRYYAHVSFLVTLPTSKGNTNYIEYVARNLNRGSFFWSLGLRAF 180

Query: 181 YFTIPLFLWIFGPLSMFASCYLITFVLYFLDYTGSSNYDPYEYVQKEEANNSDIESVGQS 220
           Y + PLFLWIFGP+ MF  C  ++F+LYFLD T S   + + +  KEEA   D+ES  QS
Sbjct: 181 YLSFPLFLWIFGPIPMFVCCCTMSFLLYFLDTTSSFTRELHSHSFKEEAKLDDLESPVQS 240

The following BLAST results are available for this feature:

BLAST of CsaV3_1G006970 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137490.1	5.7e-128	100.00	PREDICTED: uncharacterized protein LOC101217102 [Cucumis sativus] >KGN64154.1 hy...	[more]
XP_008461857.1	4.7e-122	95.45	PREDICTED: uncharacterized protein LOC103500327 [Cucumis melo]	[more]
XP_023520400.1	4.2e-107	84.30	uncharacterized protein LOC111783713 [Cucurbita pepo subsp. pepo]	[more]
XP_023001060.1	2.1e-106	83.88	uncharacterized protein LOC111495313 [Cucurbita maxima]	[more]
XP_022994262.1	4.7e-106	85.12	uncharacterized protein LOC111490049 [Cucurbita maxima]	[more]

BLAST of CsaV3_1G006970 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G18215.1	2.7e-55	51.72	Protein of unknown function, DUF599	[more]
AT5G24600.1	9.6e-53	51.75	Protein of unknown function, DUF599	[more]
AT4G31330.1	1.0e-25	36.62	Protein of unknown function, DUF599	[more]
AT5G24790.1	1.2e-23	31.80	Protein of unknown function, DUF599	[more]
AT5G10580.1	2.1e-23	34.88	Protein of unknown function, DUF599	[more]

BLAST of CsaV3_1G006970 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_1G006970 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LT21\|A0A0A0LT21_CUCSA	3.8e-128	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042630 PE=4 SV=1	[more]
tr\|A0A1S3CFP7\|A0A1S3CFP7_CUCME	3.1e-122	95.45	uncharacterized protein LOC103500327 OS=Cucumis melo OX=3656 GN=LOC103500327 PE=...	[more]
tr\|A0A2P6P224\|A0A2P6P224_ROSCH	1.7e-67	61.76	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0179261 PE=4...	[more]
tr\|V4UFS3\|V4UFS3_9ROSI	2.0e-65	59.17	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10009323mg PE=4 ...	[more]
tr\|A0A2H5QG65\|A0A2H5QG65_CITUN	4.5e-65	59.17	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_227170 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006747	DUF599

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0048366	leaf development
biological_process	GO:0000278	mitotic cell cycle
biological_process	GO:0008285	negative regulation of cell proliferation
biological_process	GO:0045824	negative regulation of innate immune response
biological_process	GO:0048451	petal formation
biological_process	GO:0031123	RNA 3'-end processing
biological_process	GO:0043631	RNA polyadenylation
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0004652	polynucleotide adenylyltransferase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G006970.1	CsaV3_1G006970.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006747	Protein of unknown function DUF599	PFAM	PF04654	DUF599	coord: 10..192 e-value: 2.0E-62 score: 210.2
None	No IPR available	PANTHER	PTHR31168	FAMILY NOT NAMED	coord: 2..215
None	No IPR available	PANTHER	PTHR31168:SF1	SUBFAMILY NOT NAMED	coord: 2..215

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G006970	CSPI01G07030	Wild cucumber (PI 183967)	cpicucB001
CsaV3_1G006970	CSPI01G04090	Wild cucumber (PI 183967)	cpicucB004
CsaV3_1G006970	Cucsa.111290	Cucumber (Gy14) v1	cgycucB145
CsaV3_1G006970	Cucsa.121760	Cucumber (Gy14) v1	cgycucB163
CsaV3_1G006970	CmaCh18G000550	Cucurbita maxima (Rimu)	cmacucB0464
CsaV3_1G006970	CmaCh10G003140	Cucurbita maxima (Rimu)	cmacucB0065
CsaV3_1G006970	CmaCh13G010060	Cucurbita maxima (Rimu)	cmacucB0248
CsaV3_1G006970	CmoCh10G003370	Cucurbita moschata (Rifu)	cmocucB0052
CsaV3_1G006970	CmoCh13G010440	Cucurbita moschata (Rifu)	cmocucB0234
CsaV3_1G006970	Cp4.1LG18g06850	Cucurbita pepo (Zucchini)	cpecucB0449
CsaV3_1G006970	Cp4.1LG09g11290	Cucurbita pepo (Zucchini)	cpecucB0031
CsaV3_1G006970	Cp4.1LG20g01360	Cucurbita pepo (Zucchini)	cpecucB0623
CsaV3_1G006970	CsGy1G003980	Cucumber (Gy14) v2	cgybcucB004
CsaV3_1G006970	CsGy1G006850	Cucumber (Gy14) v2	cgybcucB002
CsaV3_1G006970	Carg04831	Silver-seed gourd	carcucB0418
CsaV3_1G006970	Carg22737	Silver-seed gourd	carcucB0548
CsaV3_1G006970	Carg15164	Silver-seed gourd	carcucB0825
CsaV3_1G006970	Cla018946	Watermelon (97103) v1	cucwmB107
CsaV3_1G006970	Cla018473	Watermelon (97103) v1	cucwmB070
CsaV3_1G006970	MELO3C002114	Melon (DHL92) v3.5.1	cucmeB024
CsaV3_1G006970	MELO3C017333	Melon (DHL92) v3.5.1	cucmeB056
CsaV3_1G006970	ClCG06G014520	Watermelon (Charleston Gray)	cucwcgB090
CsaV3_1G006970	ClCG04G010860	Watermelon (Charleston Gray)	cucwcgB063
CsaV3_1G006970	Lsi06G013080	Bottle gourd (USVL1VR-Ls)	cuclsiB083
CsaV3_1G006970	MELO3C017333.2	Melon (DHL92) v3.6.1	cucmedB053
CsaV3_1G006970	MELO3C002114.2	Melon (DHL92) v3.6.1	cucmedB022
CsaV3_1G006970	Cla97C04G077660	Watermelon (97103) v2	cucwmbB054
CsaV3_1G006970	Cla97C06G124010	Watermelon (97103) v2	cucwmbB078
CsaV3_1G006970	Bhi02G000070	Wax gourd	cucwgoB101

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CsaV3_1G006970	CsaV3_1G004070	Cucumber (Chinese Long) v3	cuccucB000

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G006970	Silver-seed gourd	carcucB0630
CsaV3_1G006970	Cucurbita maxima (Rimu)	cmacucB0102
CsaV3_1G006970	Cucurbita moschata (Rifu)	cmocucB0092
CsaV3_1G006970	Cucurbita moschata (Rifu)	cmocucB0457
CsaV3_1G006970	Cucurbita pepo (Zucchini)	cpecucB0816
CsaV3_1G006970	Bottle gourd (USVL1VR-Ls)	cuclsiB022
CsaV3_1G006970	Wax gourd	cucwgoB031