CmoCh13G010440 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh13G010440
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	TRP-like ion channel pkd2
Location	Cmo_Chr13 : 8755688 .. 8757227 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATGAAACATCTTGAATATGTGATGGTTCCGCTTGGTTTTACGGTGCTGGTGGGATACCATCTTTGGCTGATAATCACCATTTACCGGAGTCCTAAAAGAACTGTCATTGGAATCAACGCTGAATCCCGCCGGCAATGGGTCGCCACCATTGTTTCAGTGAGTGTCTCTCCTCTCCGACTCTCTTTTCTTCCATTTTGTGTGTCAACTCATTTCAAGGATTGTTTCTGTCGTTTGATATCTGATTTCTTGTTCGGAAAAAGCATCTGCAAGTGAGACAAAACTAATATCTGATTTCATCTCATTTCAAGGACCGTTTCCTAGTCTTGTTGATATCTCTGATAGCATTATTGTGTAGCTTTGAGGATTTTGGTTTGTCATGATCTTTCTTCATTCATTTTCATCTAAAATCGTCTACTAACCAACACCTGTCGAATTGCAAACATTCATTCCTCTATGGATAGAGATTTAAGCTGTTCACTTCGTGTCTAGATGAAGAATTCGAGTCATCTCATTAAGATTCCACATGTACTTCTAATCGTGTTCCCTCCCTCATGTTGAGAAACTTATTCTGCCTCGTGCCTTCTAAATCATATACAATTGATTAGTTCAGAAGGTATAGTGAATGAATCAATTGAGAAGTCATCTTGTCCCCTCCTCCCATTTCAGTGGAGGTGGAGAAGGAGAGAGAGAAAACCTCCATGGCTGACTACATTACGAGTGATCATGTTCAGGACCCCGAGAAGAATGCTGTTCTTGGAGTCCAAACCATACGAAACAACATCATGGCTTCGACGCTTATGGCTACGACGACGATCACCGTCGGCTCATTGATCAGTGTTTTTGTGGGCAGCTCATCAAGTACTGGAAAGTACCGTTACATTTTGCTGTGTTTCCTCGTTGCATTTCTTTGCAATGTGCAATCTATTAGATACTATGCTCATGCTAGCTTCTTAGTCACATTGCCTGCTGGTGAAGGCAGAAAGGACTATCTTTCTGCAATCTTGAATCGAGGAAGCTTATTTTGGTCGATCGGATTGCGAGCTTTCTATTTCGCAATTCCTTTCTTCCTCTGGATCTTTGGACCTCTATCAATGTTTTTCAGTTGCTACCTGATAGTTTTTGTTCTTTACTTCTTGGACTTTACAAGAACTTCCAGCTATGATCCTTATGGACTTTACAAGGACATTGAATCTGTTGGTCAGTCAGGGTGAGTACTCTGTTACTTTCATACACTTGACTGATTTTTTTTTCTTTCTATCTGTCCTTATGATTTTGCATATTCATCATGGTTTTCTGAATGAGTGTTCTGAATCGATTCGGGTCAGGGGAAACAATTTCGTCGCGAACTCATGCATTCGCTCTCCTCTACTTGAAGATCACATTATAGCCTCCCATTGAAATGGCTCTGCATACTCAATATTTTGAGCTATTGGTTGCGTTGAGAATTGTGTTTAGGAAGAGATTGAAAGAGAATTTTCATTTGTATTTAATCCACAGGCATTACCTGAATGTGTGCAAGTATTTACTTAAATGA

mRNA sequence

ATGGAAATGAAACATCTTGAATATGTGATGGTTCCGCTTGGTTTTACGGTGCTGGTGGGATACCATCTTTGGCTGATAATCACCATTTACCGGAGTCCTAAAAGAACTGTCATTGGAATCAACGCTGAATCCCGCCGGCAATGGGTCGCCACCATTGTTTCAGACCCCGAGAAGAATGCTGTTCTTGGAGTCCAAACCATACGAAACAACATCATGGCTTCGACGCTTATGGCTACGACGACGATCACCGTCGGCTCATTGATCAGTGTTTTTGTGGGCAGCTCATCAAGTACTGGAAAGTACCGTTACATTTTGCTGTGTTTCCTCGTTGCATTTCTTTGCAATGTGCAATCTATTAGATACTATGCTCATGCTAGCTTCTTAGTCACATTGCCTGCTGGTGAAGGCAGAAAGGACTATCTTTCTGCAATCTTGAATCGAGGAAGCTTATTTTGGTCGATCGGATTGCGAGCTTTCTATTTCGCAATTCCTTTCTTCCTCTGGATCTTTGGACCTCTATCAATGTTTTTCAGTTGCTACCTGATAGTTTTTGTTCTTTACTTCTTGGACTTTACAAGAACTTCCAGCTATGATCCTTATGGACTTTACAAGGACATTGAATCTGTTGGTCAGTCAGGGCATTACCTGAATGTGTGCAAGTATTTACTTAAATGA

Coding sequence (CDS)

ATGGAAATGAAACATCTTGAATATGTGATGGTTCCGCTTGGTTTTACGGTGCTGGTGGGATACCATCTTTGGCTGATAATCACCATTTACCGGAGTCCTAAAAGAACTGTCATTGGAATCAACGCTGAATCCCGCCGGCAATGGGTCGCCACCATTGTTTCAGACCCCGAGAAGAATGCTGTTCTTGGAGTCCAAACCATACGAAACAACATCATGGCTTCGACGCTTATGGCTACGACGACGATCACCGTCGGCTCATTGATCAGTGTTTTTGTGGGCAGCTCATCAAGTACTGGAAAGTACCGTTACATTTTGCTGTGTTTCCTCGTTGCATTTCTTTGCAATGTGCAATCTATTAGATACTATGCTCATGCTAGCTTCTTAGTCACATTGCCTGCTGGTGAAGGCAGAAAGGACTATCTTTCTGCAATCTTGAATCGAGGAAGCTTATTTTGGTCGATCGGATTGCGAGCTTTCTATTTCGCAATTCCTTTCTTCCTCTGGATCTTTGGACCTCTATCAATGTTTTTCAGTTGCTACCTGATAGTTTTTGTTCTTTACTTCTTGGACTTTACAAGAACTTCCAGCTATGATCCTTATGGACTTTACAAGGACATTGAATCTGTTGGTCAGTCAGGGCATTACCTGAATGTGTGCAAGTATTTACTTAAATGA

Homology

[Close]

BLAST of CmoCh13G010440 vs. TrEMBL
Match: A0A0A0LT21_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042630 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 9.7e-93
Identity = 180/219 (82.19%), Postives = 195/219 (89.04%), Query Frame = 1


Query: 1   MEMKHLEYVMVPLGFTVLVGYHLWLIITIYRSPKRTVIGINAESRRQWVATIVSDPEKNA 60
           ME+K LEY+MVPLGF VLV YHLWLIITIYR PKRTVIGINAESRRQWV+T++SDP KN 
Sbjct: 1   MEVKGLEYLMVPLGFAVLVSYHLWLIITIYRRPKRTVIGINAESRRQWVSTMISDPAKNG 60

Query: 61  VLGVQTIRNNIMASTLMATTTITVGSLISVFVGSSSSTGKYRYILLCFLVAFLCNVQSIR 120
           VL VQTIRNNIMASTLMATTTIT+GSLISVFV S+SSTGKYRYI+LCFLVAFLCNVQSIR
Sbjct: 61  VLAVQTIRNNIMASTLMATTTITIGSLISVFVSSTSSTGKYRYIVLCFLVAFLCNVQSIR 120

Query: 121 YYAHASFLVTLPAGEGRKDYLSAILNRGSLFWSIGLRAFYFAIPFFLWIFGPLSMFFSCY 180
           YYAHASFLVTLP GEGRK+YL+AILNRGSLFWS+GLRAFYF IP FLWIFGPLSMF SCY
Sbjct: 121 YYAHASFLVTLPDGEGRKEYLAAILNRGSLFWSLGLRAFYFTIPLFLWIFGPLSMFASCY 180

Query: 181 LIVFVLYFLDFTRTSSYDPYGLYK-------DIESVGQS 213
           LI FVLYFLD+T +S+YDPY   +       DIESVGQS
Sbjct: 181 LITFVLYFLDYTGSSNYDPYEYVQKEEANNSDIESVGQS 219

[Close]

BLAST of CmoCh13G010440 vs. TrEMBL
Match: D7SJ44_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g03130 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 7.5e-61
Identity = 131/213 (61.50%), Postives = 159/213 (74.65%), Query Frame = 1


Query: 1   MEMKHLEYVMVPLGFTVLVGYHLWLIITIYRSPKRTVIGINAESRRQWVATIVSDPEKNA 60
           M+ +HL+YV+VPLG  V+  YH+WL ITI RSP RTVIGINA+SRRQWV ++++DP KN 
Sbjct: 1   MKEEHLDYVVVPLGLAVMGAYHVWLFITILRSPSRTVIGINAQSRRQWVFSLMADPLKNG 60

Query: 61  VLGVQTIRNNIMASTLMATTTITVGSLISVFVGSSS------------------STGKYR 120
           VL VQTIRNNIMA+TL+ATT IT+ SLISVFV S+S                  S+ KY 
Sbjct: 61  VLAVQTIRNNIMAATLLATTAITLSSLISVFVSSTSKSSSTASVLVYGNKTSLVSSIKYF 120

Query: 121 YILLCFLVAFLCNVQSIRYYAHASFLVTLPAGEGRKD---YLSAILNRGSLFWSIGLRAF 180
            ILLCFLVAFLCNVQSIRYYAH SFLVTLP   G++D   Y++  L+RGS+FWS+GLRAF
Sbjct: 121 SILLCFLVAFLCNVQSIRYYAHVSFLVTLPTSMGKRDSIEYVARNLDRGSIFWSLGLRAF 180

Query: 181 YFAIPFFLWIFGPLSMFFSCYLIVFVLYFLDFT 193
           Y + P FLWIFGP+ MF  C ++ F+LYFLD T
Sbjct: 181 YLSFPLFLWIFGPIPMFVCCCIMSFMLYFLDTT 213

[Close]

BLAST of CmoCh13G010440 vs. TrEMBL
Match: A0A067KTK1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10693 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 6.3e-60
Identity = 132/213 (61.97%), Postives = 154/213 (72.30%), Query Frame = 1


Query: 1   MEMKHLEYVMVPLGFTVLVGYHLWLIITIYRSPKRTVIGINAESRRQWVATIVSDPEKNA 60
           ME + L+YV+VP+G  V+  YH+WL+ TI +SP RTVIGINAESR QWV  I+SDP KN 
Sbjct: 1   MEEEDLDYVLVPVGLLVMGIYHIWLLFTIIKSPSRTVIGINAESRHQWVLAIMSDPLKNG 60

Query: 61  VLGVQTIRNNIMASTLMATTTITVGSLISVFVGSSSSTG------------------KYR 120
           VL VQTIRNNIMASTL+ATT IT+ SLISVFV S+SS+G                  KY 
Sbjct: 61  VLAVQTIRNNIMASTLLATTAITLTSLISVFVSSTSSSGNTASKLVYGNKTSIVSSIKYF 120

Query: 121 YILLCFLVAFLCNVQSIRYYAHASFLVTLPAGEGRK---DYLSAILNRGSLFWSIGLRAF 180
            ILLCFLVAFLCNVQSIRYYAH SFL T+P   G+K   +Y +  LNRGSLFWS+GLRAF
Sbjct: 121 SILLCFLVAFLCNVQSIRYYAHVSFLATVPTSVGKKEAIEYAARNLNRGSLFWSLGLRAF 180

Query: 181 YFAIPFFLWIFGPLSMFFSCYLIVFVLYFLDFT 193
           Y + P FLW FGP+ MF  C ++ FVLYFLD T
Sbjct: 181 YVSFPLFLWTFGPIPMFVCCCIMSFVLYFLDTT 213

[Close]

BLAST of CmoCh13G010440 vs. TrEMBL
Match: V4UFS3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009323mg PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 8.3e-60
Identity = 135/240 (56.25%), Postives = 164/240 (68.33%), Query Frame = 1


Query: 1   MEMKHLEYVMVPLGFTVLVGYHLWLIITIYRSPKRTVIGINAESRRQWVATIVSDPEKNA 60
           ME K L+YV++P G  V+  YH+WL+ TI R P+R+VIG+NAESR QWV +I++DP KN 
Sbjct: 1   MEEKKLDYVLIPTGLLVMGVYHIWLLYTILRFPRRSVIGLNAESRHQWVHSIMTDPLKNG 60

Query: 61  VLGVQTIRNNIMASTLMATTTITVGSLISVFVGSSSSTG------------------KYR 120
            L VQTIRNNIMASTL+ATT IT+ SLI VFV S+SS+G                  KY 
Sbjct: 61  TLAVQTIRNNIMASTLLATTAITLSSLIGVFVSSTSSSGNTASEIIYGNKTSILSSIKYF 120

Query: 121 YILLCFLVAFLCNVQSIRYYAHASFLVTLPAGEGRKDYLSAI---LNRGSLFWSIGLRAF 180
            ILLCFLVAFLCNVQSIRYYAH SFLVTLP  +G ++Y+  +   LNRGS FWS+GLRAF
Sbjct: 121 TILLCFLVAFLCNVQSIRYYAHVSFLVTLPTSKGNRNYIEYVARNLNRGSFFWSLGLRAF 180

Query: 181 YFAIPFFLWIFGPLSMFFSCYLIVFVLYFLD----FTR---TSSYDPYGLYKDIESVGQS 213
           Y + P FLWIFGP+ MF  C  + F+LYFLD    FTR   + S+       D+ES  QS
Sbjct: 181 YLSFPLFLWIFGPIPMFVCCCTMSFLLYFLDTTSSFTRELHSHSFKEEAKLDDLESPVQS 240

[Close]

BLAST of CmoCh13G010440 vs. TrEMBL
Match: A0A0A0LUZ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G024290 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.8e-59
Identity = 128/213 (60.09%), Postives = 156/213 (73.24%), Query Frame = 1


Query: 1   MEMKHLEYVMVPLGFTVLVGYHLWLIITIYRSPKRTVIGINAESRRQWVATIVSDPEKNA 60
           ME   +++++VPLG  +LV YHLWL++TIYR+P+RTVIG+NAESRRQWV  +++DP KN 
Sbjct: 1   MEEAAIDFLLVPLGLCLLVVYHLWLVLTIYRNPRRTVIGLNAESRRQWVFCVMTDPLKNG 60

Query: 61  VLGVQTIRNNIMASTLMATTTITVGSLISVFVGSSSSTG------------------KYR 120
           VL VQTIRNNIMASTL+ATT IT+ SLI VFV SSS                     KY 
Sbjct: 61  VLAVQTIRNNIMASTLLATTAITLSSLIGVFVSSSSDMSNAKLHLIYGNKSALCTSIKYF 120

Query: 121 YILLCFLVAFLCNVQSIRYYAHASFLVTLPAGEGRKD---YLSAILNRGSLFWSIGLRAF 180
            ILLCFLVAFLCNVQSIRYYAH SFLVT+P    +K+   Y++  LNRGS FWS+GLRAF
Sbjct: 121 SILLCFLVAFLCNVQSIRYYAHVSFLVTVPTWRDQKESIQYVARNLNRGSHFWSVGLRAF 180

Query: 181 YFAIPFFLWIFGPLSMFFSCYLIVFVLYFLDFT 193
           YF+ P FLWIFGP+ MF  C +++ +LYFLD T
Sbjct: 181 YFSFPLFLWIFGPIPMFACCCIMLCILYFLDTT 213

[Close]

BLAST of CmoCh13G010440 vs. TAIR10
Match: AT3G18215.1 (AT3G18215.1 Protein of unknown function, DUF599)

HSP 1 Score: 210.3 bits (534), Expect = 1.2e-54
Identity = 114/208 (54.81%), Postives = 144/208 (69.23%), Query Frame = 1


Query: 6   LEYVMVPLGFTVLVGYHLWLIITIYRSPKRTVIGINAESRRQWVATIVSDPEKNAVLGVQ 65
           L+ V+VP G  V+V YH+WL+  I   PK TVI +NAESRRQWV +++++P KN  L VQ
Sbjct: 7   LDLVLVPTGLVVMVAYHVWLVYAILHRPKLTVIALNAESRRQWVFSMMTEPLKNGTLAVQ 66

Query: 66  TIRNNIMASTLMATTTITVGSLISVFVGSSSSTG------------------KYRYILLC 125
           TIRNNIMASTL+ATT IT+ S+I VFV +SSS+                   K   IL+C
Sbjct: 67  TIRNNIMASTLLATTAITLCSIIGVFVSNSSSSKSTATNLIYGSKSPRLASFKNFAILIC 126

Query: 126 FLVAFLCNVQSIRYYAHASFLVTLPAGEGRK---DYLSAILNRGSLFWSIGLRAFYFAIP 185
           FL+AFLCN+QSIRYYAH SFLVT+P   G++   +Y+S  LNR S FWS+GLRAFYF+ P
Sbjct: 127 FLMAFLCNIQSIRYYAHVSFLVTVPVSRGKREHCEYVSRNLNRASYFWSLGLRAFYFSFP 186

Query: 186 FFLWIFGPLSMFFSCYLIVFVLYFLDFT 193
            FLW FGP+ MF  C ++  +LYFLD T
Sbjct: 187 LFLWTFGPIPMFVCCCMMSSILYFLDTT 214

[Close]

BLAST of CmoCh13G010440 vs. TAIR10
Match: AT5G24600.1 (AT5G24600.1 Protein of unknown function, DUF599)

HSP 1 Score: 194.1 bits (492), Expect = 9.1e-50
Identity = 111/225 (49.33%), Postives = 147/225 (65.33%), Query Frame = 1


Query: 1   MEMKHLEYVMVPLGFTVLVGYHLWLIITIYRSPKRTVIGINAESRRQWVATIVSDPEKNA 60
           M+ ++L+Y +VPLG  ++V YHLWL+  I   P  TV+G+NA +RR WV  ++ D  KN 
Sbjct: 1   MKREYLDYTLVPLGLALMVFYHLWLLYRIIHRPSSTVVGLNAFNRRLWVQAMMEDSSKNG 60

Query: 61  VLGVQTIRNNIMASTLMATTTITVGSLISVFVGSSSSTG------------------KYR 120
           VL VQT+RNNIMASTL+A+T I + SLI+V +  +S+TG                  K+ 
Sbjct: 61  VLAVQTLRNNIMASTLLASTAIMLCSLIAVLM--TSATGERSVWFVFGDKSDRAFSLKFF 120

Query: 121 YILLCFLVAFLCNVQSIRYYAHASFLVTLP---------AGEG------RKDYLSAILNR 180
            IL+CFLVAFL NVQSIRYY+HAS L+ +P          G G       +DY++A +NR
Sbjct: 121 AILVCFLVAFLLNVQSIRYYSHASILINVPFKQLMAVSSGGRGNGSLMINQDYVAATVNR 180

Query: 181 GSLFWSIGLRAFYFAIPFFLWIFGPLSMFFSCYLIVFVLYFLDFT 193
           GS FWS+GLRAFYF+ P FLWIFGP+ MF +C ++V  LYFLD T
Sbjct: 181 GSYFWSLGLRAFYFSSPLFLWIFGPIPMFITCCVLVCSLYFLDLT 223

[Close]

BLAST of CmoCh13G010440 vs. TAIR10
Match: AT5G46060.1 (AT5G46060.1 Protein of unknown function, DUF599)

HSP 1 Score: 124.4 bits (311), Expect = 8.8e-29
Identity = 75/209 (35.89%), Postives = 116/209 (55.50%), Query Frame = 1


Query: 1   MEMKHLEYVMVPLGFTVLVGYHLWLIITIYRSPKRTVIGINAESRRQWVATIVSDPEKNA 60
           ++ ++L+ V+VP G  +++ YHL+L+  I   P  T+IG     +  WV  I+   +   
Sbjct: 5   VKKEYLDLVLVPFGLIIVLSYHLFLLYRILYFPYHTIIGFMNIDKSIWVDRIMQARKDEL 64

Query: 61  VLGVQTIRNNIMASTLMATTTITVGSLISVFVGSSSS-----TG--------------KY 120
              +  + ++I AST MA+  +T+ SLI  ++GSS       TG              KY
Sbjct: 65  GGALTVLSSSISASTFMASIALTLSSLIGAWIGSSPVSMTVFTGHFIYGDTSSITMVIKY 124

Query: 121 RYILLCFLVAFLCNVQSIRYYAHASFLVTLPAGEGRKDYLSAILNRGSLFWSIGLRAFYF 180
             +L+CFLVAF C +QS R + HA++L+T P  +   D +   + RG  +WS+GLRA Y 
Sbjct: 125 TSLLICFLVAFCCFIQSTRCFLHANYLITTPGEDIPPDMVKRFVLRGGNYWSLGLRALYL 184

Query: 181 AIPFFLWIFGPLSMFFSCYLIVFVLYFLD 191
           A+   LW+FGP+ MF +  L+V  LYFLD
Sbjct: 185 ALDLLLWLFGPVPMFINSVLMVICLYFLD 213

[Close]

BLAST of CmoCh13G010440 vs. TAIR10
Match: AT5G10580.1 (AT5G10580.1 Protein of unknown function, DUF599)

HSP 1 Score: 113.6 bits (283), Expect = 1.6e-25
Identity = 78/219 (35.62%), Postives = 112/219 (51.14%), Query Frame = 1


Query: 2   EMKHLEYVMVPLGFTVLVGYHLWLIITIYRSPKRTVIGINAESRRQWVATIVSDPEKNAV 61
           E  +L+ V+VP    ++ GYH++L   +   P  T++G N+ +RR WVA I+ D EK  +
Sbjct: 4   EKWYLDAVLVPSALLMMFGYHIYLWYKVRTDPFCTIVGTNSRARRSWVAAIMKDNEKKNI 63

Query: 62  LGVQTIRNNIMASTLMATTTITVGSLISVFVGSSSSTGK------------------YRY 121
           L VQT+RN IM  TLMATT I + + ++  + S+ S  K                  Y  
Sbjct: 64  LAVQTLRNTIMGGTLMATTCILLCAGLAAVLSSTYSIKKPLNDAVYGAHGDFTVALKYVT 123

Query: 122 ILLCFLVAFLCNVQSIRYYAHASFLVTLPAGEGRKD-----------YLSAILNRGSLFW 181
           IL  FL AF  +  SIR+    + L+  P      D           Y+S +L +  L  
Sbjct: 124 ILTIFLFAFFSHSLSIRFINQVNILINAPQEPFSDDFGEIGSFVTPEYVSELLEKAFLLN 183

Query: 182 SIGLRAFYFAIPFFLWIFGPLSMFFSCYLIVFVLYFLDF 192
           ++G R FY  +P  LWIFGP+ +F S  LI+ VLY LDF
Sbjct: 184 TVGNRLFYMGLPLMLWIFGPVLVFLSSALIIPVLYNLDF 222

[Close]

BLAST of CmoCh13G010440 vs. TAIR10
Match: AT4G31330.1 (AT4G31330.1 Protein of unknown function, DUF599)

HSP 1 Score: 112.8 bits (281), Expect = 2.7e-25
Identity = 75/214 (35.05%), Postives = 116/214 (54.21%), Query Frame = 1


Query: 5   HLEYVMVPLGFTVLVGYHLWLIITIYRSPKRTVIGINAESRRQWVATIVSDPEKNAVLGV 64
           +L+ ++VPLG  V   YH++L   +   P  T+IG NA +RR WVA+I+ D +K  +L V
Sbjct: 7   YLDVILVPLGLMVYASYHVYLWHKLRTQPLTTIIGTNARARRFWVASIIKDNDKKNILAV 66

Query: 65  QTIRNNIMASTLMATTTITVGSLISVFVGSSSSTG------------------KYRYILL 124
           QT+RN IM STLMATT+I + + ++  + S+ +                    KY  IL 
Sbjct: 67  QTLRNCIMGSTLMATTSILLCAGLAAVLSSTYAVKKPLNDAVFGARGEFMVALKYVTILT 126

Query: 125 CFLVAFLCNVQSIRYYAHASFLVTLPAGEGR---------KDYLSAILNRGSLFWSIGLR 184
            FL +F  +  SIR+    + L+  P              ++Y++ +L RG +  ++G R
Sbjct: 127 IFLFSFFSHSLSIRFINQVNILINTPFPPEELEDEMMMTAEEYVAELLERGFILNTVGNR 186

Query: 185 AFYFAIPFFLWIFGPLSMFFSCYLIVFVLYFLDF 192
            FY A+P  LWIFGP+ +F    ++V +LY LDF
Sbjct: 187 LFYAALPLMLWIFGPVLVFLCSVVMVPLLYNLDF 220

[Close]

BLAST of CmoCh13G010440 vs. NCBI nr
Match: gi|449439433|ref|XP_004137490.1| (PREDICTED: uncharacterized protein LOC101217102 [Cucumis sativus])

HSP 1 Score: 347.8 bits (891), Expect = 1.4e-92
Identity = 180/219 (82.19%), Postives = 195/219 (89.04%), Query Frame = 1


Query: 1   MEMKHLEYVMVPLGFTVLVGYHLWLIITIYRSPKRTVIGINAESRRQWVATIVSDPEKNA 60
           ME+K LEY+MVPLGF VLV YHLWLIITIYR PKRTVIGINAESRRQWV+T++SDP KN 
Sbjct: 1   MEVKGLEYLMVPLGFAVLVSYHLWLIITIYRRPKRTVIGINAESRRQWVSTMISDPAKNG 60

Query: 61  VLGVQTIRNNIMASTLMATTTITVGSLISVFVGSSSSTGKYRYILLCFLVAFLCNVQSIR 120
           VL VQTIRNNIMASTLMATTTIT+GSLISVFV S+SSTGKYRYI+LCFLVAFLCNVQSIR
Sbjct: 61  VLAVQTIRNNIMASTLMATTTITIGSLISVFVSSTSSTGKYRYIVLCFLVAFLCNVQSIR 120

Query: 121 YYAHASFLVTLPAGEGRKDYLSAILNRGSLFWSIGLRAFYFAIPFFLWIFGPLSMFFSCY 180
           YYAHASFLVTLP GEGRK+YL+AILNRGSLFWS+GLRAFYF IP FLWIFGPLSMF SCY
Sbjct: 121 YYAHASFLVTLPDGEGRKEYLAAILNRGSLFWSLGLRAFYFTIPLFLWIFGPLSMFASCY 180

Query: 181 LIVFVLYFLDFTRTSSYDPYGLYK-------DIESVGQS 213
           LI FVLYFLD+T +S+YDPY   +       DIESVGQS
Sbjct: 181 LITFVLYFLDYTGSSNYDPYEYVQKEEANNSDIESVGQS 219

[Close]

BLAST of CmoCh13G010440 vs. NCBI nr
Match: gi|659066798|ref|XP_008461857.1| (PREDICTED: uncharacterized protein LOC103500327 [Cucumis melo])

HSP 1 Score: 345.1 bits (884), Expect = 9.0e-92
Identity = 178/219 (81.28%), Postives = 193/219 (88.13%), Query Frame = 1


Query: 1   MEMKHLEYVMVPLGFTVLVGYHLWLIITIYRSPKRTVIGINAESRRQWVATIVSDPEKNA 60
           ME+K LE+ MVPLGF VLV YHLWLIITIYR PKRTVIG+NAESRRQWV+T++SDP KN 
Sbjct: 1   MEVKDLEFFMVPLGFAVLVSYHLWLIITIYRRPKRTVIGVNAESRRQWVSTMISDPAKNG 60

Query: 61  VLGVQTIRNNIMASTLMATTTITVGSLISVFVGSSSSTGKYRYILLCFLVAFLCNVQSIR 120
           VL VQTIRNNIMASTLMATTTIT+GSLISVFV S+SSTGKYRYI+LCFLVAFLCNVQSIR
Sbjct: 61  VLAVQTIRNNIMASTLMATTTITIGSLISVFVSSTSSTGKYRYIVLCFLVAFLCNVQSIR 120

Query: 121 YYAHASFLVTLPAGEGRKDYLSAILNRGSLFWSIGLRAFYFAIPFFLWIFGPLSMFFSCY 180
           YYAHASFLVTLP GEGRK+YL+AILNRGSLFWS+GLRAFYF IP FLWIFGPLSMF SCY
Sbjct: 121 YYAHASFLVTLPDGEGRKEYLAAILNRGSLFWSLGLRAFYFTIPLFLWIFGPLSMFASCY 180

Query: 181 LIVFVLYFLDFTRTSSYDPYGLYK-------DIESVGQS 213
           LI FVLYFLD+T +S YDPY   +       DIESVGQS
Sbjct: 181 LITFVLYFLDYTGSSKYDPYEYVQKEEANNNDIESVGQS 219

[Close]

BLAST of CmoCh13G010440 vs. NCBI nr
Match: gi|657966219|ref|XP_008374792.1| (PREDICTED: uncharacterized protein LOC103438037 [Malus domestica])

HSP 1 Score: 244.6 bits (623), Expect = 1.7e-61
Identity = 136/235 (57.87%), Postives = 165/235 (70.21%), Query Frame = 1


Query: 1   MEMKHLEYVMVPLGFTVLVGYHLWLIITIYRSPKRTVIGINAESRRQWVATIVSDPEKNA 60
           ME + ++YV+VPLG  VL  YH+WL+ITI+R P RTV+G+NA+SR QWV +I+SDP KN 
Sbjct: 1   MEAEQVDYVLVPLGLLVLGAYHVWLLITIHRHPIRTVVGLNAQSRHQWVLSIMSDPLKNG 60

Query: 61  VLGVQTIRNNIMASTLMATTTITVGSLISVFVGSSSSTG------------------KYR 120
           VL VQTIRNNIMASTL+ATT IT+ SLI VFV ++S +G                  KY 
Sbjct: 61  VLAVQTIRNNIMASTLLATTAITLSSLIGVFVSTTSDSGNTASRLIYGNKSPLLSSVKYF 120

Query: 121 YILLCFLVAFLCNVQSIRYYAHASFLVTLPAGEGRKDYLSAI---LNRGSLFWSIGLRAF 180
            ILLCFLVAFL NVQSIRYYAH SFL T+P  +G+KDYL  +   LNRGS FWS+GLRAF
Sbjct: 121 SILLCFLVAFLLNVQSIRYYAHVSFLATVPTWKGQKDYLEYVARNLNRGSYFWSLGLRAF 180

Query: 181 YFAIPFFLWIFGPLSMFFSCYLIVFVLYFLD----FTRTSSYDPYGLYKDIESVG 211
           Y + P FLWIFGP+ MF  C +++FVLYFLD    FTR    +      D+ESVG
Sbjct: 181 YLSFPLFLWIFGPIPMFVCCCIMLFVLYFLDTTTSFTRHLHTNSIRRTDDVESVG 235

[Close]

BLAST of CmoCh13G010440 vs. NCBI nr
Match: gi|694319569|ref|XP_009347590.1| (PREDICTED: uncharacterized protein LOC103939252 [Pyrus x bretschneideri])

HSP 1 Score: 243.4 bits (620), Expect = 3.7e-61
Identity = 136/235 (57.87%), Postives = 165/235 (70.21%), Query Frame = 1


Query: 1   MEMKHLEYVMVPLGFTVLVGYHLWLIITIYRSPKRTVIGINAESRRQWVATIVSDPEKNA 60
           ME++ ++YV+VPLG  VL  YH+WL+ITI+R P RTV+G+NA+SR QWV +I+SDP KN 
Sbjct: 1   MEVEQVDYVLVPLGLLVLGAYHVWLLITIHRHPIRTVVGLNAQSRHQWVLSIMSDPLKNG 60

Query: 61  VLGVQTIRNNIMASTLMATTTITVGSLISVFVGSSSSTG------------------KYR 120
           VL VQTIRNNIMASTL+ATT IT+ SLI VFV ++S +G                  KY 
Sbjct: 61  VLAVQTIRNNIMASTLLATTAITLSSLIGVFVSTTSDSGNTASRLVYGNKSPILSSVKYF 120

Query: 121 YILLCFLVAFLCNVQSIRYYAHASFLVTLPAGEGRKDYLSAI---LNRGSLFWSIGLRAF 180
            ILLCFLVAFL NVQSIRYYAH SFL T+P  +G+KDYL  +   LNRGS FWS+GLRAF
Sbjct: 121 SILLCFLVAFLLNVQSIRYYAHVSFLATVPTWKGQKDYLEYVARNLNRGSYFWSLGLRAF 180

Query: 181 YFAIPFFLWIFGPLSMFFSCYLIVFVLYFLD----FTRTSSYDPYGLYKDIESVG 211
           Y + P FLWIFGP+ MF  C ++ FVLYFLD    FTR    +      D+ESVG
Sbjct: 181 YLSFPLFLWIFGPIPMFVCCCIMSFVLYFLDTTTSFTRHLHTNSIRGTDDVESVG 235

[Close]

BLAST of CmoCh13G010440 vs. NCBI nr
Match: gi|470127203|ref|XP_004299565.1| (PREDICTED: uncharacterized protein LOC101293202 [Fragaria vesca subsp. vesca])

HSP 1 Score: 243.0 bits (619), Expect = 4.8e-61
Identity = 140/238 (58.82%), Postives = 167/238 (70.17%), Query Frame = 1


Query: 1   MEMKHLEYVMVPLGFTVLVGYHLWLIITIYRSPKRTVIGINAESRRQWVATIVSDPEKNA 60
           ME + L+YV+VPLG  VL  YH+WL+IT+ R P RTVIG+NA+SR QW  +++SDP KN 
Sbjct: 1   MEEEDLDYVLVPLGLCVLGTYHVWLLITVLRHPIRTVIGLNAQSRHQWALSMMSDPLKNG 60

Query: 61  VLGVQTIRNNIMASTLMATTTITVGSLISVFVGSSSSTG-----------------KYRY 120
           VL VQTIRNNIMASTL+ATT IT+ SLISVFV S+S++G                 KY  
Sbjct: 61  VLAVQTIRNNIMASTLLATTAITLSSLISVFVSSTSNSGNTSNLVYGNKTATLSSIKYFS 120

Query: 121 ILLCFLVAFLCNVQSIRYYAHASFLVTLPAGEGRKD---YLSAILNRGSLFWSIGLRAFY 180
           ILLCFLVAFLCNVQSIRYYAH SFL T+P  +GRKD   Y++  LNRGS FWS+GLRAFY
Sbjct: 121 ILLCFLVAFLCNVQSIRYYAHVSFLATVPTWQGRKDCIEYVARNLNRGSYFWSLGLRAFY 180

Query: 181 FAIPFFLWIFGPLSMFFSCYLIVFVLYFLD----FTR---TSSYDPYGLYKDIESVGQ 212
           F+ P FLWIFGP+ MF    +I FVLYFLD    FTR   + S        D+ES+GQ
Sbjct: 181 FSFPLFLWIFGPIPMFACSCVISFVLYFLDTTTSFTRLLHSHSVKEVKADHDLESLGQ 238

The following BLAST results are available for this feature:

BLAST of CmoCh13G010440 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh13G010440 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LT21_CUCSA	9.7e-93	82.19	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042630 PE=4 SV=1	[more]
D7SJ44_VITVI	7.5e-61	61.50	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g03130 PE=4 SV=...	[more]
A0A067KTK1_JATCU	6.3e-60	61.97	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10693 PE=4 SV=1	[more]
V4UFS3_9ROSI	8.3e-60	56.25	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009323mg PE=4 SV=1	[more]
A0A0A0LUZ8_CUCSA	1.8e-59	60.09	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G024290 PE=4 SV=1	[more]

BLAST of CmoCh13G010440 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G18215.1	1.2e-54	54.81	Protein of unknown function, DUF599	[more]
AT5G24600.1	9.1e-50	49.33	Protein of unknown function, DUF599	[more]
AT5G46060.1	8.8e-29	35.89	Protein of unknown function, DUF599	[more]
AT5G10580.1	1.6e-25	35.62	Protein of unknown function, DUF599	[more]
AT4G31330.1	2.7e-25	35.05	Protein of unknown function, DUF599	[more]

BLAST of CmoCh13G010440 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449439433\|ref\|XP_004137490.1\|	1.4e-92	82.19	PREDICTED: uncharacterized protein LOC101217102 [Cucumis sativus]	[more]
gi\|659066798\|ref\|XP_008461857.1\|	9.0e-92	81.28	PREDICTED: uncharacterized protein LOC103500327 [Cucumis melo]	[more]
gi\|657966219\|ref\|XP_008374792.1\|	1.7e-61	57.87	PREDICTED: uncharacterized protein LOC103438037 [Malus domestica]	[more]
gi\|694319569\|ref\|XP_009347590.1\|	3.7e-61	57.87	PREDICTED: uncharacterized protein LOC103939252 [Pyrus x bretschneideri]	[more]
gi\|470127203\|ref\|XP_004299565.1\|	4.8e-61	58.82	PREDICTED: uncharacterized protein LOC101293202 [Fragaria vesca subsp. vesca]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006747	DUF599

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh13G010440.1	CmoCh13G010440.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006747	Protein of unknown function DUF599	PFAM	PF04654	DUF599	coord: 9..193 score: 4.2
None	No IPR available	PANTHER	PTHR31168	FAMILY NOT NAMED	coord: 1..198 score: 3.8E
None	No IPR available	PANTHER	PTHR31168:SF1	DUF599 FAMILY PROTEIN	coord: 1..198 score: 3.8E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh13G010440	Cucsa.111290	Cucumber (Gy14) v1	cgycmoB0263
CmoCh13G010440	Cucsa.121760	Cucumber (Gy14) v1	cgycmoB0314
CmoCh13G010440	CmaCh13G010060	Cucurbita maxima (Rimu)	cmacmoB218
CmoCh13G010440	Cla018946	Watermelon (97103) v1	cmowmB202
CmoCh13G010440	Cla018473	Watermelon (97103) v1	cmowmB194
CmoCh13G010440	Csa1G042630	Cucumber (Chinese Long) v2	cmocuB202
CmoCh13G010440	Csa1G024290	Cucumber (Chinese Long) v2	cmocuB207
CmoCh13G010440	MELO3C002114	Melon (DHL92) v3.5.1	cmomeB180
CmoCh13G010440	MELO3C017333	Melon (DHL92) v3.5.1	cmomeB191
CmoCh13G010440	ClCG04G010860	Watermelon (Charleston Gray)	cmowcgB191
CmoCh13G010440	ClCG06G014520	Watermelon (Charleston Gray)	cmowcgB195
CmoCh13G010440	CSPI01G07030	Wild cucumber (PI 183967)	cmocpiB204
CmoCh13G010440	CSPI01G04090	Wild cucumber (PI 183967)	cmocpiB209
CmoCh13G010440	Lsi02G002140	Bottle gourd (USVL1VR-Ls)	cmolsiB198
CmoCh13G010440	Lsi06G013080	Bottle gourd (USVL1VR-Ls)	cmolsiB206
CmoCh13G010440	Cp4.1LG18g06850	Cucurbita pepo (Zucchini)	cmocpeB195
CmoCh13G010440	MELO3C002114.2	Melon (DHL92) v3.6.1	cmomedB202
CmoCh13G010440	MELO3C017333.2	Melon (DHL92) v3.6.1	cmomedB213
CmoCh13G010440	CsaV3_1G004070	Cucumber (Chinese Long) v3	cmocucB0238
CmoCh13G010440	CsaV3_1G006970	Cucumber (Chinese Long) v3	cmocucB0234
CmoCh13G010440	Cla97C04G077660	Watermelon (97103) v2	cmowmbB216
CmoCh13G010440	Cla97C06G124010	Watermelon (97103) v2	cmowmbB222
CmoCh13G010440	Bhi02G000070	Wax gourd	cmowgoB0278
CmoCh13G010440	CsGy1G003980	Cucumber (Gy14) v2	cgybcmoB071
CmoCh13G010440	Carg15164	Silver-seed gourd	carcmoB1065
CmoCh13G010440	Carg22737	Silver-seed gourd	carcmoB0698
CmoCh13G010440	Carg04831	Silver-seed gourd	carcmoB0526

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh13G010440	CmoCh10G003370	Cucurbita moschata (Rifu)	cmocmoB055

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh13G010440	Cucurbita pepo (Zucchini)	cmocpeB183
CmoCh13G010440	Cucurbita pepo (Zucchini)	cmocpeB201
CmoCh13G010440	Cucurbita pepo (Zucchini)	cmocpeB212
CmoCh13G010440	Cucumber (Gy14) v2	cgybcmoB067
CmoCh13G010440	Silver-seed gourd	carcmoB0810
CmoCh13G010440	Wax gourd	cmowgoB0258
CmoCh13G010440	Cucurbita moschata (Rifu)	cmocmoB089
CmoCh13G010440	Cucurbita moschata (Rifu)	cmocmoB171
CmoCh13G010440	Cucurbita maxima (Rimu)	cmacmoB399
CmoCh13G010440	Cucurbita maxima (Rimu)	cmacmoB125