CsaV3_1G006900 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G006900
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionAlcohol dehydrogenase 7
Locationchr1 : 4385665 .. 4386101 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACTTGCAGAGGCAGGGTTTCTGTTCCTTAATCTTAGAGCAACATAGCTTAGAAGGTGGAACTGAAGATGTTATTGCACTAACGCAGGAGCTTAGTTGCACTGGACTGCATGTCACTGCCATTGTGATCTCCACCGTCATAAACATCACTATGATACTTAGTGCAATCTGTGATGCCTTCATTTTCTTTCTTTTAAGGCAGTTGAACTTTAGGGGTGTGTGTGTGAAAGAGAAAGAGAGAAAGAGGTAGAGAGAGAGATAGAATTGAGAGATGTGGAATGTTGGGTGAAAATGGCTTAAGTTGCTTCTCAATTTATAGCCGCAAGGTGAAGGTCTTGAAAGCAAGAGATCATCATCAAGGGTCATGTTCACATTTCTGTTTTTGTAGGTTATCAAAGAAAAGGGACAGTAGCAGCGGAAGAGAAAATGTCCTGA

mRNA sequence

ATGTACTTGCAGAGGCAGGGTTTCTGTTCCTTAATCTTAGAGCAACATAGCTTAGAAGGTGGAACTGAAGATGTTATTGCACTAACGCAGGAGCTTAGTTGCACTGGACTGCATGTCACTGCCATTGTGATCTCCACCGTCATAAACATCACTATGATACTTAGTGCAATCTGTGATGCCTTCATTTTCTTTCTTTTAAGGCAGTTGAACTTTAGGGGTTATCAAAGAAAAGGGACAGTAGCAGCGGAAGAGAAAATGTCCTGA

Coding sequence (CDS)

ATGTACTTGCAGAGGCAGGGTTTCTGTTCCTTAATCTTAGAGCAACATAGCTTAGAAGGTGGAACTGAAGATGTTATTGCACTAACGCAGGAGCTTAGTTGCACTGGACTGCATGTCACTGCCATTGTGATCTCCACCGTCATAAACATCACTATGATACTTAGTGCAATCTGTGATGCCTTCATTTTCTTTCTTTTAAGGCAGTTGAACTTTAGGGGTTATCAAAGAAAAGGGACAGTAGCAGCGGAAGAGAAAATGTCCTGA

Protein sequence

MYLQRQGFCSLILEQHSLEGGTEDVIALTQELSCTGLHVTAIVISTVINITMILSAICDAFIFFLLRQLNFRGYQRKGTVAAEEKMS
Homology
[Close]
BLAST of CsaV3_1G006900 vs. NCBI nr
Match: AAF44336.1 (alcohol dehydrogenase 7 [Vitis vinifera])

HSP 1 Score: 65.9 bits (159), Expect = 8.1e-08
Identity = 40/66 (60.61%), Postives = 46/66 (69.70%), Query Frame = 0 

Query: 2  YLQRQGFCSLILEQHSLEGGTEDVIALTQELSCTGLHVTAIVI--STVINITMILSAICD 61
          Y QR GFCSLIL QHSL+GG +DVIA TQELS  GLHVTA V+  S   + +   +AI D
Sbjct: 27 YWQRHGFCSLILLQHSLDGGVDDVIAPTQELSSVGLHVTATVMCASARSSTSTAQTAIYD 86

Query: 62 AFIFFL 66
           FIF L
Sbjct: 87 TFIFAL 92

[Close]
BLAST of CsaV3_1G006900 vs. TrEMBL
Match: tr|Q9M6B4|Q9M6B4_VITVI (Alcohol dehydrogenase 7 OS=Vitis vinifera OX=29760 GN=ADH7 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 5.3e-08
Identity = 40/66 (60.61%), Postives = 46/66 (69.70%), Query Frame = 0 

Query: 2  YLQRQGFCSLILEQHSLEGGTEDVIALTQELSCTGLHVTAIVI--STVINITMILSAICD 61
          Y QR GFCSLIL QHSL+GG +DVIA TQELS  GLHVTA V+  S   + +   +AI D
Sbjct: 27 YWQRHGFCSLILLQHSLDGGVDDVIAPTQELSSVGLHVTATVMCASARSSTSTAQTAIYD 86

Query: 62 AFIFFL 66
           FIF L
Sbjct: 87 TFIFAL 92

The following BLAST results are available for this feature:
BLAST of CsaV3_1G006900 vs. NCBI nr
Match NameE-valueIdentityDescription
AAF44336.18.1e-0860.61alcohol dehydrogenase 7 [Vitis vinifera][more]
BLAST of CsaV3_1G006900 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G006900 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G006900 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|Q9M6B4|Q9M6B4_VITVI5.3e-0860.61Alcohol dehydrogenase 7 OS=Vitis vinifera OX=29760 GN=ADH7 PE=2 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G006900.1CsaV3_1G006900.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_1G006900Cucumber (Chinese Long) v3cuccucB000
CsaV3_1G006900Silver-seed gourdcarcucB0418
CsaV3_1G006900Silver-seed gourdcarcucB0548
CsaV3_1G006900Silver-seed gourdcarcucB0630
CsaV3_1G006900Silver-seed gourdcarcucB0825
CsaV3_1G006900Cucumber (Gy14) v2cgybcucB002
CsaV3_1G006900Cucumber (Gy14) v2cgybcucB004
CsaV3_1G006900Cucumber (Gy14) v1cgycucB145
CsaV3_1G006900Cucumber (Gy14) v1cgycucB163
CsaV3_1G006900Cucumber (Gy14) v1cgycucB434
CsaV3_1G006900Cucurbita maxima (Rimu)cmacucB0065
CsaV3_1G006900Cucurbita maxima (Rimu)cmacucB0102
CsaV3_1G006900Cucurbita maxima (Rimu)cmacucB0248
CsaV3_1G006900Cucurbita maxima (Rimu)cmacucB0464
CsaV3_1G006900Cucurbita maxima (Rimu)cmacucB0485
CsaV3_1G006900Cucurbita moschata (Rifu)cmocucB0052
CsaV3_1G006900Cucurbita moschata (Rifu)cmocucB0092
CsaV3_1G006900Cucurbita moschata (Rifu)cmocucB0234
CsaV3_1G006900Cucurbita moschata (Rifu)cmocucB0457
CsaV3_1G006900Cucurbita moschata (Rifu)cmocucB0466
CsaV3_1G006900Cucurbita pepo (Zucchini)cpecucB0031
CsaV3_1G006900Cucurbita pepo (Zucchini)cpecucB0449
CsaV3_1G006900Cucurbita pepo (Zucchini)cpecucB0623
CsaV3_1G006900Cucurbita pepo (Zucchini)cpecucB0816
CsaV3_1G006900Wild cucumber (PI 183967)cpicucB001
CsaV3_1G006900Wild cucumber (PI 183967)cpicucB004
CsaV3_1G006900Bottle gourd (USVL1VR-Ls)cuclsiB022
CsaV3_1G006900Bottle gourd (USVL1VR-Ls)cuclsiB063
CsaV3_1G006900Bottle gourd (USVL1VR-Ls)cuclsiB083
CsaV3_1G006900Melon (DHL92) v3.5.1cucmeB024
CsaV3_1G006900Melon (DHL92) v3.5.1cucmeB056
CsaV3_1G006900Melon (DHL92) v3.6.1cucmedB022
CsaV3_1G006900Melon (DHL92) v3.6.1cucmedB053
CsaV3_1G006900Watermelon (Charleston Gray)cucwcgB063
CsaV3_1G006900Watermelon (Charleston Gray)cucwcgB090
CsaV3_1G006900Watermelon (97103) v1cucwmB070
CsaV3_1G006900Watermelon (97103) v1cucwmB107
CsaV3_1G006900Watermelon (97103) v2cucwmbB054
CsaV3_1G006900Watermelon (97103) v2cucwmbB078
CsaV3_1G006900Wax gourdcucwgoB031