CsaV3_1G005210 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTTAAGTTTAGTTAGGGGAGGGGTTTAAGATTATATTAAGATTTAGATTGGTTTGATGAAGTGAAAGTTGTGGGTTTTACTTCTCTTCCATCATGAATTCGGTAATCACAAAATCTACGGCGGTGCTATATCACTATCCATGTCCCGACGGCGCTTTCGCCGCTCTGGCAGCTCATCTCTACTTCTCCACTGTTTCTAAAAACCAATCACCTCTTCTCTTTTTCCCCAATACTGTCTATAATCCCCTCAGGTTAACGTTTTTTGCTCACTTCGTTTACATTTACCTTCCACCTTCTTAAAACTCTGAACTTTACCTTTGATTTATTTTCTTTCAGACCCGACCAGCTTCCCCTCCATCAAATTGCCGACGTTTACCTTTTGGACTATGTGGGTCCTTTTGGATTTGTGCAGGACATCTCTTCTAAAGTTAACAGGTCTTTTGTGGTTTTATATTATCAATGGAATTTTTAAATTTACTATGGTTGCTTGGAAATTGTGTCTGATATCTCTTTTTTTCTTCACTTCTTTATATATGGTTAGAGTGATTATACTGGACCACCACAAGACGGCTCTTGAAAAGCTCACTCATGATTGTTCAATTGGTGAAAATGTGATTAAAGTTATTGATATTCAGAGAAGTGGAGCTACTATTGCTTTTGACTATTTCAAGCAAAAGCTTGTACAAGATGCTGTCGCCAACTTTGATGTTGATGTTGGTTCTTCTTCCCAACACAAAGTGCTGAATGAATTTGAACGTATGAGGAAACTTTATGAATATATTGAGGATGGGGATCTTTGGAAGTGGAGTCTTCCAAATAGTAAAGCTCTAAGCAGCGGTTTGAAAGATTTGAATATTGAGTTTGATGCTCTCTTGAATCCTAATTTATTTAATCAGGTGATTTCTCCGGGGTCATTGAGAGTTGTGTGAGATTGTTCTTGCTTTGCTGATTTTCAAACTTGTTTGTCTACTCATCAAGTATCTTCTTTGTGCTTGGTTGTTCCATGAAAATATTCAATTACTTAAACAATGCACCACAATGTTGAATAATCTTAATGGCTTCTAGGTAACATGGATGGTTTTACAGTTCATTTGATCGCTTTCATGCAGCAAGATTGATTAGAAAGACACCAAGTTGCAAAAATGCATAGCTTTTCAAACTCTTGAGCATATCACATTACATCCTTCTCGTTTCTCTTGTAAAATGTCACCGTTCTCTTGGATGACTACAATATAGCAATAGCACTGAAGATGATTAAGGAGTATGTGTTTTTGCAGTTACTATCTCTGGATATGGAGACTATGATTAGTCAAGGAATAGTGAGTTTATCTCACAAACAAAAATTAATAGACGGTGTTCTGAATCAATCATATAGCATTACACTCGGTGGTGGAGCTTTTGGACGTTGTCTGGTATGTCCACTAGTCTCACTTTTGTTCCCTTTTATCCATCTTTCTAACTGAACCAAAATTTGAAACTAATTGTTACTCACCATATTGTATAATTGTTATGTTGGCTTGATTAATTTTTTTTTTCAAGTAGTTGTTTTTAATTCAAGTAACTAAATGTATTTAAGGTCTTTGGTCATGACTCATGAGCTTCATTTTTACTGAATTTTTCTTTGCAAAATGGTCATCTTCTTAATCAAATGAATAAGCATTGATTTACAGTCCATGCTAGTCTTTGCCCATTAAATTATTTAATAGAATGGAGCTAAAAATTGGAAAATAATGAAGATTGAGAAATAGTCCAAAATTAATCTTTTATATTCTCTAATTTTGTTTGTCCCCCAATAGGCTGTTGATGCAGATTCTGTTTCAGAACTAAGAAGTGAATTAGGACACCAATTGGCTACTAAGAGTCAAAACTTAAACTTCAGGTATGTCAATTTTTCTACTTATATACCTTTGGGATATTTAGGGTGAAAAGAACAAGAGAGTTTTTAGAGGTTATGAGAAGGACCCTTATGAGGTTTGGTTTTTAGCGAGGTTCCATACTTCTTTTTCGGCTTTGCTTTTGAAGTTTCTTTTCTTTCTTTTTTTTAACTATTCCCTTGGTAACATCTTACTGAGTTGGAAGCACTTCTTGTACAAGACTTATTGTTTGTTTTTGGTGGGCTTGTGTTTTTTATTTGTCTCTTGTATTCTTTCATTCTTTCTCAATGAAAGTTGTCTATTTCATAAAAAAAATTATCCAAGAAAAGAAATGGTTGTTTCTTATTTGTATATTTTTAAATCATTTTTTTCATCTCATTGTCCTATGGATGTACGGAGATATAGTATGAATAGTTCTTTGGCCAGGAAAGTCGGTAGCTCTTCTTCTCTAGTTTCTTTTCTTGTATTTTGTCTAGTATGATGGTATCTGCACTGATCATTAATACATCCCTTGAACTTTTTGCAACGTATTTTCTCCTTTTCTTCTTTTTATTAGCTCCTGCTGTGATTTTGGTAATTTTATTGTTAGAAGGTTTTGAATCACGCTCTTAAATTCTTGTCCGTTGGGCTGACCTTCTATGTGTACCTTATTGATTGTTAGTATGAAAGCTTATGTACCCCCCACTCCCAATAAGGTTGTTTTGTCTTGGTGGTTGTTCAGTAATTTGCAATCGTAACTTATAGAAGTTATACAACGTATTTGTAATCATAACTAAGACCGTCCGAAGTGACTATTCAAGTACTTAAAGATATACCTTTTTTCGCTTAAAAATACTTTCATAAACACTTAAAAAATCATTTTGAACAGGCTCTAGCTTCATTTAAATGATAGAGATATTTAAAAAATTAACCCTTCAATCCATCTCTGTCTTGAATTCTCGACAATTTGTCTGGTTTATTTTCATTCCCTTGTATTCTTGTAGAGGCATTGGGGCTGTTGTATACCGAGTCCCTGAACTTGGGAATGACCAGATGTTGAAAATAAGTCTTAGAAGTGTGAACGAAGAAGACACAACTCCCATCTCACAGGTTCAATGCTTCCTCTGATCTTTTGAAATCAAACATTAAGTCATTAATGAGCTGATAATGGCAATGGTTTTTTGAGATCTCAACCTCTTTGCTTCCATTTCTCAGGAATTTGGAGGTGGTGGCCATAGAAATGCAAGCTCCTTCATGTTAAGCTCTACAGAATTCCAGAAATGGAAGATTTGAACACACAGAAGTAAGCAAAAGGCTGATTTCATGTGCGCTAGTCTTTCATTGAAGGTAACGTTATATCCTTGGGACATATCAGCATTATGGGAGGTGAAATGAGTAAGTTGTTATACTCTAAATTATAGAAGGTGTGCTAAAGCTTGGAATAAATCTCAAGGATTTCATGTGGGTAGGATGTGAGATAGTGTTAATGGCTGAACTTATATGTGAAATGAATACGTTGTCATGAATTGAATTCTATCTACACAGACCAATCTTGGCAGTGTTCGAGATGGGTGGTGGAGGATCTTGTGAAACTTATCGATAATGGCTTCCTGTCAACTTATCAATAAGTAAGTGTGTTTATTGCTTGTGGATATTATGGATAGCTTTAGAAAGTATATATATGGTGTTTTTAATGAAGTAAGCCAGAGATGAGATAATTCACCAAGAAAAGGTGAAACCAAAATATATTCCATAGAGGTCTTGTTTCTACTTGATTTGATTAAATTTGACCCTACAGAAGTCACCAACCACACCCACAATCCAAAATACATAATCTACAGATGGAAATTGACAAATATCACCACCCTTCTCCTCTGCTCTTTCTTCCCAATCCCATCAACTTGTATGTATATATGTATATATATGTAGAGAGAGAGAGAGATACACGTCGTTCGTATAAATTATTATAATAAAGAAAAAATATAGGGACCATTAAATCTATAAAATTATTAGGAACCAATATGAGTTTCAATTGGTGAAAGTCAGGTGAGAGAGGTCATCGAGGCCGATGGCTGATGAATTGGAAGCACACCATGCATCTTCTGTAATGAATTGCATCCATGAATCATCCTTTTCCTCTTCTTCCACACAAGAAGATGAAGCTGCCATCAGAATATCAGGTGATAGAGTTTCGTAATCATTGACTAAAGTTTGTGATGTTGAGTTTGAGTTCTCCATAAATGACAAGCTGCTGCTGCTGCTTTGCCCA ATGAATTCGGTAATCACAAAATCTACGGCGGTGCTATATCACTATCCATGTCCCGACGGCGCTTTCGCCGCTCTGGCAGCTCATCTCTACTTCTCCACTGTTTCTAAAAACCAATCACCTCTTCTCTTTTTCCCCAATACTGTCTATAATCCCCTCAGACCCGACCAGCTTCCCCTCCATCAAATTGCCGACGTTTACCTTTTGGACTATGTGGGTCCTTTTGGATTTGTGCAGGACATCTCTTCTAAAGTTAACAGAGTGATTATACTGGACCACCACAAGACGGCTCTTGAAAAGCTCACTCATGATTGTTCAATTGGTGAAAATGTGATTAAAGTTATTGATATTCAGAGAAGTGGAGCTACTATTGCTTTTGACTATTTCAAGCAAAAGCTTGTACAAGATGCTGTCGCCAACTTTGATGTTGATGTTGGTTCTTCTTCCCAACACAAAGTGCTGAATGAATTTGAACGTATGAGGAAACTTTATGAATATATTGAGGATGGGGATCTTTGGAAGTGGAGTCTTCCAAATAGTAAAGCTCTAAGCAGCGGTTTGAAAGATTTGAATATTGAGTTTGATGCTCTCTTGAATCCTAATTTATTTAATCAGTTACTATCTCTGGATATGGAGACTATGATTAGTCAAGGAATAGTGAGTTTATCTCACAAACAAAAATTAATAGACGGTGTTCTGAATCAATCATATAGCATTACACTCGGTGGTGGAGCTTTTGGACGTTGTCTGGCTGTTGATGCAGATTCTGTTTCAGAACTAAGAAGTGAATTAGGACACCAATTGGCTACTAAGAGTCAAAACTTAAACTTCAGAGGCATTGGGGCTGTTGTATACCGAGTCCCTGAACTTGGGAATGACCAGATGTTGAAAATAAGTCTTAGAAGTGTGAACGAAGAAGACACAACTCCCATCTCACAGGAATTTGGAGGTGGTGGCCATAGAAATGCAAGCTCCTTCATGTTAAGCTCTACAGAATTCCAGAAATGGAAGATTTGA ATGAATTCGGTAATCACAAAATCTACGGCGGTGCTATATCACTATCCATGTCCCGACGGCGCTTTCGCCGCTCTGGCAGCTCATCTCTACTTCTCCACTGTTTCTAAAAACCAATCACCTCTTCTCTTTTTCCCCAATACTGTCTATAATCCCCTCAGACCCGACCAGCTTCCCCTCCATCAAATTGCCGACGTTTACCTTTTGGACTATGTGGGTCCTTTTGGATTTGTGCAGGACATCTCTTCTAAAGTTAACAGAGTGATTATACTGGACCACCACAAGACGGCTCTTGAAAAGCTCACTCATGATTGTTCAATTGGTGAAAATGTGATTAAAGTTATTGATATTCAGAGAAGTGGAGCTACTATTGCTTTTGACTATTTCAAGCAAAAGCTTGTACAAGATGCTGTCGCCAACTTTGATGTTGATGTTGGTTCTTCTTCCCAACACAAAGTGCTGAATGAATTTGAACGTATGAGGAAACTTTATGAATATATTGAGGATGGGGATCTTTGGAAGTGGAGTCTTCCAAATAGTAAAGCTCTAAGCAGCGGTTTGAAAGATTTGAATATTGAGTTTGATGCTCTCTTGAATCCTAATTTATTTAATCAGTTACTATCTCTGGATATGGAGACTATGATTAGTCAAGGAATAGTGAGTTTATCTCACAAACAAAAATTAATAGACGGTGTTCTGAATCAATCATATAGCATTACACTCGGTGGTGGAGCTTTTGGACGTTGTCTGGCTGTTGATGCAGATTCTGTTTCAGAACTAAGAAGTGAATTAGGACACCAATTGGCTACTAAGAGTCAAAACTTAAACTTCAGAGGCATTGGGGCTGTTGTATACCGAGTCCCTGAACTTGGGAATGACCAGATGTTGAAAATAAGTCTTAGAAGTGTGAACGAAGAAGACACAACTCCCATCTCACAGGAATTTGGAGGTGGTGGCCATAGAAATGCAAGCTCCTTCATGTTAAGCTCTACAGAATTCCAGAAATGGAAGATTTGA MNSVITKSTAVLYHYPCPDGAFAALAAHLYFSTVSKNQSPLLFFPNTVYNPLRPDQLPLHQIADVYLLDYVGPFGFVQDISSKVNRVIILDHHKTALEKLTHDCSIGENVIKVIDIQRSGATIAFDYFKQKLVQDAVANFDVDVGSSSQHKVLNEFERMRKLYEYIEDGDLWKWSLPNSKALSSGLKDLNIEFDALLNPNLFNQLLSLDMETMISQGIVSLSHKQKLIDGVLNQSYSITLGGGAFGRCLAVDADSVSELRSELGHQLATKSQNLNFRGIGAVVYRVPELGNDQMLKISLRSVNEEDTTPISQEFGGGGHRNASSFMLSSTEFQKWKI
BLAST of CsaV3_1G005210 vs. NCBI nr
Match: XP_004137397.1 (PREDICTED: uncharacterized protein LOC101214462 [Cucumis sativus] >KGN63972.1 hypothetical protein Csa_1G032420 [Cucumis sativus]) HSP 1 Score: 676.0 bits (1743), Expect = 6.6e-191 Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 0
BLAST of CsaV3_1G005210 vs. NCBI nr
Match: XP_008439353.1 (PREDICTED: uncharacterized protein LOC103484141 [Cucumis melo]) HSP 1 Score: 641.0 bits (1652), Expect = 2.3e-180 Identity = 319/337 (94.66%), Postives = 325/337 (96.44%), Query Frame = 0
BLAST of CsaV3_1G005210 vs. NCBI nr
Match: XP_022923824.1 (uncharacterized protein LOC111431421 isoform X2 [Cucurbita moschata]) HSP 1 Score: 572.0 bits (1473), Expect = 1.3e-159 Identity = 288/337 (85.46%), Postives = 305/337 (90.50%), Query Frame = 0
BLAST of CsaV3_1G005210 vs. NCBI nr
Match: XP_023001121.1 (uncharacterized protein LOC111495359 isoform X1 [Cucurbita maxima]) HSP 1 Score: 571.2 bits (1471), Expect = 2.3e-159 Identity = 289/337 (85.76%), Postives = 304/337 (90.21%), Query Frame = 0
BLAST of CsaV3_1G005210 vs. NCBI nr
Match: XP_023519513.1 (uncharacterized protein LOC111782904 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 569.7 bits (1467), Expect = 6.6e-159 Identity = 287/337 (85.16%), Postives = 305/337 (90.50%), Query Frame = 0
BLAST of CsaV3_1G005210 vs. TAIR10
Match: AT1G53345.1 (unknown protein) HSP 1 Score: 402.1 bits (1032), Expect = 3.3e-112 Identity = 204/332 (61.45%), Postives = 252/332 (75.90%), Query Frame = 0
BLAST of CsaV3_1G005210 vs. TAIR10
Match: AT5G09580.1 (unknown protein) HSP 1 Score: 140.2 bits (352), Expect = 2.3e-33 Identity = 100/331 (30.21%), Postives = 158/331 (47.73%), Query Frame = 0
BLAST of CsaV3_1G005210 vs. Swiss-Prot
Match: sp|Q5UPH8|YR106_MIMIV (Uncharacterized protein R106 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_R106 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 2.0e-10 Identity = 83/340 (24.41%), Postives = 143/340 (42.06%), Query Frame = 0
BLAST of CsaV3_1G005210 vs. TrEMBL
Match: tr|A0A0A0LT85|A0A0A0LT85_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G032420 PE=4 SV=1) HSP 1 Score: 676.0 bits (1743), Expect = 4.3e-191 Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 0
BLAST of CsaV3_1G005210 vs. TrEMBL
Match: tr|A0A1S3AZ92|A0A1S3AZ92_CUCME (uncharacterized protein LOC103484141 OS=Cucumis melo OX=3656 GN=LOC103484141 PE=4 SV=1) HSP 1 Score: 641.0 bits (1652), Expect = 1.5e-180 Identity = 319/337 (94.66%), Postives = 325/337 (96.44%), Query Frame = 0
BLAST of CsaV3_1G005210 vs. TrEMBL
Match: tr|A0A2K1XH81|A0A2K1XH81_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_015G030300v3 PE=4 SV=1) HSP 1 Score: 484.6 bits (1246), Expect = 1.9e-133 Identity = 239/336 (71.13%), Postives = 283/336 (84.23%), Query Frame = 0
BLAST of CsaV3_1G005210 vs. TrEMBL
Match: tr|A0A2K1XH78|A0A2K1XH78_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa OX=3694 GN=POPTR_015G030300v3 PE=4 SV=1) HSP 1 Score: 477.6 bits (1228), Expect = 2.3e-131 Identity = 239/343 (69.68%), Postives = 283/343 (82.51%), Query Frame = 0
BLAST of CsaV3_1G005210 vs. TrEMBL
Match: tr|A0A1S2Z551|A0A1S2Z551_CICAR (uncharacterized protein LOC101509715 OS=Cicer arietinum OX=3827 GN=LOC101509715 PE=4 SV=1) HSP 1 Score: 467.2 bits (1201), Expect = 3.1e-128 Identity = 241/334 (72.16%), Postives = 279/334 (83.53%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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