Carg04724 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAGTATATTGACTGCACGGTATAAAAATAGGTACAGTAGACGAAGTGTGTGGAACTTGTCGACTCGCGTTCAAGATTTAAGAACGTGAAGGCAAATATTGGAGGGAAAGAGTCGCGAATCTTAAGATCGAGATTTGGTTGGATGAACAGAAATTTGTAGGGTTCGGTTCCTTTCATCATGAATTCCGTAAACACAAAAGCTACGGCGGTGCTTTATCACTATCCATGTCCCGACGGCGCGTTCGCCGCTCTCGCCGCTCATCTCTACTTCTCCGCCGCTTCTCTACCCCCTCTCTTTTTCCCCAATACCGTCTACAATCCCCTCAGGTAGTCTTTTCTCCTGCATTTACCTTCAACCTTGTTGCTTAAACTCTGCACAAACACTAAACTTCACTTTTTAATTCTACTTTTTCTTTCAGAACGGACCAGCTTCCCCTGCATCAAATTGACGACGTTTATCTTTTGGATTTTGTGGGGCCGTTTGGATTTGTTGAGGACCTATCATCTAAAGTTAACAGGTGTTTTTGATGTTCCATGCCCCGTTCTTTATGGGTTTTTTTTTTTTGCTTTTGATGAACGTGTGATGTCTTTAGTGTGAGTGATTTTGAAATGATTAAAATTACTTTTCATGTGAGTGATTTTGAAATGATTAAAATTACTTTTCATGTGAGTGATTTTGAAATGATTAAAACTACTTTTCAGCTCCATTAAACCACTTTAAACATGCTTTCAATCGTATAAAAAATTGTGTTTGAACGGGATGTTAAACCTAATAATTAAAGATATGTTTTTGAGTAATTTTGTTAGGAATCACGGATCTCTACCGTGGTATGATATTGTCCACTTTAATCTTAAGCTTAAGCTGGCTTCCCAAAAGGCATGATATTGTCCACTTTGTTGGCTTCTCCAAAAGGCATTCCTAGTTTATAAATTCATGATCTTTCCTTAAATTAGCAAGATGCAAGATGTGACTCCATCCCACAATCAACTGTTAATTTGGTTAATGCTGCAACCTGGGATTAGGAGGGAAATGGTTGATGCAAATCCGATGTTTGTGTTGGTGTCTGTAACTTTGAATGTTATGAACTTTCGCGTCTAACTCTAATCTCCTTGAGTCATTTAGAAAATTTCTGTAGAACGAATCCTATGGATATCATGGAACAAGCTGAGCCTGTTCCAGTTCCATGGTGGGCTCTTCTTCTTAATGTTATTTATTAAGTTATTATGGTTGCTTAGAAATTAATGCTCTTTTTCCCTTTTATATATCTCCTCAAGAGTGATAATACTGGACCACCACAAGACGGCTCTTGAAAAGCTCAGCGATGAGTCTTCATTTGGTGAAAACGTGACTAAAGTTATAGATATTCAAAGAAGTGGAGCTACAATAGCTTTTGACTATTTCAAGCAAAAGCTAATACAAGATGCTTACGGGAATTTTGACGTTGGTTCTTCCAATTACAAAGTGCTAAATGAATTTGAGCGCATGAGGAGACTTTATGAATACATTGAGGATGGCGATCTTTGGAAGTGGAGTCTTCCAAATAGTAAAGCTCTTAGCAGTGGTTTCAAAGATTTGAATATTGAATATGATACGCTTTTGAATCCTAACTTATTTGATCAGGTAATTTCTCCATTTTCATTATCGGTTTTTGAGATTGTTCTCGCTCTGATAGTTATCTGATTTTCTGATACCTGAGGATGCGCGGCTGTTCAAGCTTGTTTGTCTAGACATCAAGTGTCTTCTTTATCGCTTATGTGTGTTTTTGCAGTTACTATCTCTGGATATGGAGACTATGATTAGTCGAGGAATAGCAAGTTTAGCACACAAACAAAAATTAATAGAGGATGCTCTTAATCAATCGTATAGCATTACACTCGGTGGTGGAGCTTTTGGACGTTGTCTGGTATGGCCACTAGTCCCACTCTCATTACCTTATATACATCTTTCTGGCAGAATTGAAATTTGTTATTTATCACGTTGTCTGACAATAAGTAGTCGTTTATGTTGGCTTGATTAAAACTTATAAAATAGTTGCTATGAATTCAAGCAACCAAATGTGTTTGAGGTCTTCGTTCTTGTCCACGAGCTTTATTTTTACTGAATTTTGCTTTTCAATAGGCTGAGTTCTTCTATATCAAATGAACAATCATCGGTTCATGCTGGTTGGTGCCCTTTAAGTTATTTAAGAGAGTGGAGCTGGAAATTGGAAAATAATTAAGGTTAAGAAATAGGCCAAAATGAAGAACCTTTACATTCTCTGATTTTGTTCCTCTCCTCTCCCAATAGGCTGTTGATGCAGATTCTATTTCAGAACTAAGGAGTGAATTAGGACACCAATTGGCTACTAAGAGTCAAAATTCAAATTTAAGGTAAGACAACTGTTCTGCTTATATGATCTTACCTGCGCTTAAACTTACATTATGATGGTATCGACATTGGTCATTGTTCCTTCACCTTTACTTCTGGAATGTCTTGTTTCCTTTCTTCTTTTTGTTATCTCTGGCTGTGTTCTTTATTGATTTTGTACTATGAAGGCTTCAAGTCTCACTTGTAATGGCCTTAAGTTCTTGTTCTTTAATGACAGGGAGGTTTAAACAAACAGCCTATCAACCCATCTTCTAAGACTAAAGATAAATGTTTTCAATTTCTCCTCAATTTAAAAGACAACTTTTGCAGTTTATTTCCGTTCACTTTGAATTCTTGCAGAGGCATTGGGGCTGTTGTATACCGAGTCCCGGCACTTGGGAATGACCAGATGTTGAAAATAAGTCTCAGAAGTGTTCGTGACGAGGACACAACTCGTATCTCACAGGTTGAATGCTTTGTCTTATCTATAGAAATCAAACATTTATCCAATGAGCTAATAATGGTGATGATTGTTGAGATCTCAACCTCTATGCTTCCAGGGATTCGGAGGTGGGGGCCATAAAAATGCGAGCTCCTTCATGTTAAGCTCAACAGAATTCCAGAAGTGGAAGATTTGAATGATGCACACAAGTATTTGCAGTCGTGAAGTAACTTAATGGGACTTTTCATTCAAGGTAATGTTACAGCCATGTGACATAACAGCAGCCAGCATCTGTGAAGATTGCTCATTATAACCCTTCCCTCATCTCAAAGATTTCATCCGGGCGGGATATGAAATAATGTTAATTTCTGAATTTATACGTGGAATGAATAAGTTGTTCTAAATTATACCTACACGGACCAATATCGGCAGCGTTCGAGATGGCTCAACCGTGAGGCAATCTTGTGAAACTGGACTATGGTTTCCTGTGAACTGCAGCTTTATAAAATTGAAAAAAATGGAAAGGAATCGGTATATATTGCTGTTCTTCTTATTGAAGTAAACACCGAGAGGTCAGAGATCAGATAAATCACCAAAATATATTCCATAGAGTCTTGTTCATATTTGATTGATTTGACCCTACAGAACTCACCCACCACACCCAGCATCCAAAATACATAATCTACATATGGAAATTGATAAGTCTGACCACCCTCGAGAGAGAGCTGGTTGGTATGGATTATTATAGTGAAGAAGAAAATTAAAGGTATATAAGTTATGTATGGTTTCAATGGGTGGTGAAAGTGA AAAGTATATTGACTGCACGGTATAAAAATAGGTACAGTAGACGAAGTGTGTGGAACTTGTCGACTCGCGTTCAAGATTTAAGAACGTGAAGGCAAATATTGGAGGGAAAGAGTCGCGAATCTTAAGATCGAGATTTGGTTGGATGAACAGAAATTTGTAGGGTTCGGTTCCTTTCATCATGAATTCCGTAAACACAAAAGCTACGGCGGTGCTTTATCACTATCCATGTCCCGACGGCGCGTTCGCCGCTCTCGCCGCTCATCTCTACTTCTCCGCCGCTTCTCTACCCCCTCTCTTTTTCCCCAATACCGTCTACAATCCCCTCAGAACGGACCAGCTTCCCCTGCATCAAATTGACGACGTTTATCTTTTGGATTTTGTGGGGCCGTTTGGATTTGTTGAGGACCTATCATCTAAAGTTAACAGAGTGATAATACTGGACCACCACAAGACGGCTCTTGAAAAGCTCAGCGATGAGTCTTCATTTGGTGAAAACGTGACTAAAGTTATAGATATTCAAAGAAGTGGAGCTACAATAGCTTTTGACTATTTCAAGCAAAAGCTAATACAAGATGCTTACGGGAATTTTGACGTTGGTTCTTCCAATTACAAAGTGCTAAATGAATTTGAGCGCATGAGGAGACTTTATGAATACATTGAGGATGGCGATCTTTGGAAGTGGAGTCTTCCAAATAGTAAAGCTCTTAGCAGTGGTTTCAAAGATTTGAATATTGAATATGATACGCTTTTGAATCCTAACTTATTTGATCAGTTACTATCTCTGGATATGGAGACTATGATTAGTCGAGGAATAGCAAGTTTAGCACACAAACAAAAATTAATAGAGGATGCTCTTAATCAATCGTATAGCATTACACTCGGTGGTGGAGCTTTTGGACGTTGTCTGGCTGTTGATGCAGATTCTATTTCAGAACTAAGGAGTGAATTAGGACACCAATTGGCTACTAAGAGTCAAAATTCAAATTTAAGAGGCATTGGGGCTGTTGTATACCGAGTCCCGGCACTTGGGAATGACCAGATGTTGAAAATAAGTCTCAGAAGTGTTCGTGACGAGGACACAACTCGTATCTCACAGGGATTCGGAGGTGGGGGCCATAAAAATGCGAGCTCCTTCATGTTAAGCTCAACAGAATTCCAGAAGTGGAAGATTTGAATGATGCACACAAGTATTTGCAGTCGTGAAGTAACTTAATGGGACTTTTCATTCAAGGTAATGTTACAGCCATGTGACATAACAGCAGCCAGCATCTGTGAAGATTGCTCATTATAACCCTTCCCTCATCTCAAAGATTTCATCCGGGCGGGATATGAAATAATGTTAATTTCTGAATTTATACGTGGAATGAATAAGTTGTTCTAAATTATACCTACACGGACCAATATCGGCAGCGTTCGAGATGGCTCAACCGTGAGGCAATCTTGTGAAACTGGACTATGGTTTCCTGTGAACTGCAGCTTTATAAAATTGAAAAAAATGGAAAGGAATCGGTATATATTGCTGTTCTTCTTATTGAAGTAAACACCGAGAGGTCAGAGATCAGATAAATCACCAAAATATATTCCATAGAGTCTTGTTCATATTTGATTGATTTGACCCTACAGAACTCACCCACCACACCCAGCATCCAAAATACATAATCTACATATGGAAATTGATAAGTCTGACCACCCTCGAGAGAGAGCTGGTTGGTATGGATTATTATAGTGAAGAAGAAAATTAAAGGTATATAAGTTATGTATGGTTTCAATGGGTGGTGAAAGTGA ATGAATTCCGTAAACACAAAAGCTACGGCGGTGCTTTATCACTATCCATGTCCCGACGGCGCGTTCGCCGCTCTCGCCGCTCATCTCTACTTCTCCGCCGCTTCTCTACCCCCTCTCTTTTTCCCCAATACCGTCTACAATCCCCTCAGAACGGACCAGCTTCCCCTGCATCAAATTGACGACGTTTATCTTTTGGATTTTGTGGGGCCGTTTGGATTTGTTGAGGACCTATCATCTAAAGTTAACAGAGTGATAATACTGGACCACCACAAGACGGCTCTTGAAAAGCTCAGCGATGAGTCTTCATTTGGTGAAAACGTGACTAAAGTTATAGATATTCAAAGAAGTGGAGCTACAATAGCTTTTGACTATTTCAAGCAAAAGCTAATACAAGATGCTTACGGGAATTTTGACGTTGGTTCTTCCAATTACAAAGTGCTAAATGAATTTGAGCGCATGAGGAGACTTTATGAATACATTGAGGATGGCGATCTTTGGAAGTGGAGTCTTCCAAATAGTAAAGCTCTTAGCAGTGGTTTCAAAGATTTGAATATTGAATATGATACGCTTTTGAATCCTAACTTATTTGATCAGTTACTATCTCTGGATATGGAGACTATGATTAGTCGAGGAATAGCAAGTTTAGCACACAAACAAAAATTAATAGAGGATGCTCTTAATCAATCGTATAGCATTACACTCGGTGGTGGAGCTTTTGGACGTTGTCTGGCTGTTGATGCAGATTCTATTTCAGAACTAAGGAGTGAATTAGGACACCAATTGGCTACTAAGAGTCAAAATTCAAATTTAAGAGGCATTGGGGCTGTTGTATACCGAGTCCCGGCACTTGGGAATGACCAGATGTTGAAAATAAGTCTCAGAAGTGTTCGTGACGAGGACACAACTCGTATCTCACAGGGATTCGGAGGTGGGGGCCATAAAAATGCGAGCTCCTTCATGTTAAGCTCAACAGAATTCCAGAAGTGGAAGATTTGA MNSVNTKATAVLYHYPCPDGAFAALAAHLYFSAASLPPLFFPNTVYNPLRTDQLPLHQIDDVYLLDFVGPFGFVEDLSSKVNRVIILDHHKTALEKLSDESSFGENVTKVIDIQRSGATIAFDYFKQKLIQDAYGNFDVGSSNYKVLNEFERMRRLYEYIEDGDLWKWSLPNSKALSSGFKDLNIEYDTLLNPNLFDQLLSLDMETMISRGIASLAHKQKLIEDALNQSYSITLGGGAFGRCLAVDADSISELRSELGHQLATKSQNSNLRGIGAVVYRVPALGNDQMLKISLRSVRDEDTTRISQGFGGGGHKNASSFMLSSTEFQKWKI
BLAST of Carg04724 vs. NCBI nr
Match: XP_022923824.1 (uncharacterized protein LOC111431421 isoform X2 [Cucurbita moschata]) HSP 1 Score: 662.5 bits (1708), Expect = 7.3e-187 Identity = 331/331 (100.00%), Postives = 331/331 (100.00%), Query Frame = 0
BLAST of Carg04724 vs. NCBI nr
Match: XP_022923823.1 (uncharacterized protein LOC111431421 isoform X1 [Cucurbita moschata]) HSP 1 Score: 651.4 bits (1679), Expect = 1.7e-183 Identity = 331/349 (94.84%), Postives = 331/349 (94.84%), Query Frame = 0
BLAST of Carg04724 vs. NCBI nr
Match: XP_023519513.1 (uncharacterized protein LOC111782904 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 649.0 bits (1673), Expect = 8.4e-183 Identity = 324/331 (97.89%), Postives = 329/331 (99.40%), Query Frame = 0
BLAST of Carg04724 vs. NCBI nr
Match: XP_023001121.1 (uncharacterized protein LOC111495359 isoform X1 [Cucurbita maxima]) HSP 1 Score: 647.5 bits (1669), Expect = 2.4e-182 Identity = 324/331 (97.89%), Postives = 328/331 (99.09%), Query Frame = 0
BLAST of Carg04724 vs. NCBI nr
Match: XP_022137680.1 (uncharacterized protein LOC111009057 isoform X1 [Momordica charantia]) HSP 1 Score: 588.2 bits (1515), Expect = 1.8e-164 Identity = 292/331 (88.22%), Postives = 312/331 (94.26%), Query Frame = 0
BLAST of Carg04724 vs. TAIR10
Match: AT1G53345.1 (unknown protein) HSP 1 Score: 419.1 bits (1076), Expect = 2.6e-117 Identity = 209/330 (63.33%), Postives = 257/330 (77.88%), Query Frame = 0
BLAST of Carg04724 vs. TAIR10
Match: AT5G09580.1 (unknown protein) HSP 1 Score: 148.7 bits (374), Expect = 6.5e-36 Identity = 100/325 (30.77%), Postives = 162/325 (49.85%), Query Frame = 0
BLAST of Carg04724 vs. Swiss-Prot
Match: sp|Q5UPH8|YR106_MIMIV (Uncharacterized protein R106 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_R106 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.4e-08 Identity = 77/339 (22.71%), Postives = 136/339 (40.12%), Query Frame = 0
BLAST of Carg04724 vs. TrEMBL
Match: tr|A0A0A0LT85|A0A0A0LT85_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G032420 PE=4 SV=1) HSP 1 Score: 570.5 bits (1469), Expect = 2.5e-159 Identity = 288/337 (85.46%), Postives = 305/337 (90.50%), Query Frame = 0
BLAST of Carg04724 vs. TrEMBL
Match: tr|A0A1S3AZ92|A0A1S3AZ92_CUCME (uncharacterized protein LOC103484141 OS=Cucumis melo OX=3656 GN=LOC103484141 PE=4 SV=1) HSP 1 Score: 566.6 bits (1459), Expect = 3.6e-158 Identity = 287/337 (85.16%), Postives = 305/337 (90.50%), Query Frame = 0
BLAST of Carg04724 vs. TrEMBL
Match: tr|A0A2K1XH81|A0A2K1XH81_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_015G030300v3 PE=4 SV=1) HSP 1 Score: 476.5 bits (1225), Expect = 4.9e-131 Identity = 231/330 (70.00%), Postives = 278/330 (84.24%), Query Frame = 0
BLAST of Carg04724 vs. TrEMBL
Match: tr|A0A2K1XH78|A0A2K1XH78_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa OX=3694 GN=POPTR_015G030300v3 PE=4 SV=1) HSP 1 Score: 469.5 bits (1207), Expect = 6.0e-129 Identity = 231/337 (68.55%), Postives = 278/337 (82.49%), Query Frame = 0
BLAST of Carg04724 vs. TrEMBL
Match: tr|A0A2I4EVB7|A0A2I4EVB7_9ROSI (uncharacterized protein LOC108993033 OS=Juglans regia OX=51240 GN=LOC108993033 PE=4 SV=1) HSP 1 Score: 463.0 bits (1190), Expect = 5.6e-127 Identity = 231/327 (70.64%), Postives = 273/327 (83.49%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|