CsaV3_1G004660 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G004660
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Descriptiontranscription factor TCP2-like
Locationchr1 : 2961631 .. 2963469 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCTCTCTCTTAAGAGTAAAAAAAAGTATAATGGAATCCACTGTGTTGTAACCATAGGTCAAAAGAGGATGTTGTTTTTGTATAATTAGTCTTTGTTTCAGAAAGGAATGAAAGTGGTATGGAGGTGCTGGATATTCAAGAACAAGCCTGTAGGTTTCCACGAATTGGTAATGGTAGAAATGATTCCAACAAGTTAGGGCAAAAGGGTATTGTTCAATACACCCCAGATGATGAAGAAGACAAGGAATTTTCGAAAAGGGTCGCTGTTGTTACTTCTGCTACTGTTAATCCCACCGGACGATGTGAACCAGGTGGCATCGGTGGAGTTGGTGCTAATCGTCTTCATGGATGGCATCACTCGTCTCGTATTATTAGGGTTGCTCGAGCTTCTGGTGGTAAAGATCGGCACAGTAAAGTTTGGACATCGAAAGGGCTCAGAGATCGACGAGTTCGGCTTTCTGTCGCTACTGCGATTCAGTTCTACGATCTTCAAGATCGGCTTGGTTTCGAACAACCCAGCAAAGCTGTTGAGTGGCTGATCGAAGCAGCTTCCGACGCCATCGCTGAACTTCCGTCTCTGAGTGGCTCTTTCCCTGAAACTCCCAGGCAACTCAGTGACGAGAAAATGGGTAGCGATGGGGCCGACCAAGGGTTTGATTCCCCGGAAATGGAGCTCGACGGTGACCCAAAAAAACACCAACAGAATCCGAGACAGCAGCTTTCATTGGCGAGGTCTGCTTGTAGTAGTAACTCAGAGACGAGCAAGGGCTCGGGATTGTCTCTCTCCCGCTCTGAAATCCTAGTGAATCGAGCGAAGGCACGTGACAGAGCAAGAGAGAGAACTGCGAAAGAGAAGGAAAGAGAGCAAGAATCTCGCGATGCTCATTGCATTCCCAACAACCCATCTTTCACTGAGCTTCTCACCGGCGGTATCAACAATAACGGCGCCAATAACACCACCAATCGGACGAATTCAGCCTCGCAAAACAATGTAGTGGAGCCGAATTTGTTCGACAAGGCAACGGCCATGGATTACTTAGCCTCTTCTGGGATTATAGCCCAACAACCGTCGTCGTCTTCATCTTCACGGCCTGGCCATAATCAATCTGCGGGATTTTCAGGGCAAATCTTTTTGGGGAATCCACACCAATTGCCAGTGTCGATTCCACAATTTAACATCTCAGCCGCTGAAAATACTCAACAAGATCGGCTTCAACATTTCTCGTTCGTCCCAGATAATTTGAACGACTATAATCTTAACTTCACCATCTCTGCCGGCCTTGCTGGTTGCAATAGGGGGACCCTTCAGTCCAATATTTCACCGTCTTTTTTGCCTTACCTCCAGAGGTTTCCTCACTTAGAGGGATCAAACGTACCCTTTTTCATCGGAGCTGCATCGCCAACGACGGCGACGACTCCCGTACAGTTGGAAAATCACCATCAGTTGACACCAGCATTGTTTGATGGTAGCTGGCAACTCTGTTATGCTGATGGAAGCCATCACTCAGATCAAAAGGGTAAAGGAAAGAACTGATGAGTTCTCAGAAAGCACATTTCTTCCACCCCATTTCCAGGTATTTCAAATACCCTTCACCCATTGTTCATCTTTAATAAAAAAAAATTATTTCCATCCCATTTTAATTAAACTTCATCATCTATGATCCTGTTCCTGTTCCTGACTTCCTGTCTGTTTCTTTTCTTCATTCATCGACATGGTTTCCTTATTGCTGGAATTCTTGACATTTTGGATTCATGTGCTGCTGCTGTGTTGTGTATATCTGATTTGTTTTCTTGATAGTCACAAGAACAAGAATTATTGGGCATATACTTTTGTGGGTT

mRNA sequence

ATGGAGGTGCTGGATATTCAAGAACAAGCCTGTAGGTTTCCACGAATTGGTAATGGTAGAAATGATTCCAACAAGTTAGGGCAAAAGGGTATTGTTCAATACACCCCAGATGATGAAGAAGACAAGGAATTTTCGAAAAGGGTCGCTGTTGTTACTTCTGCTACTGTTAATCCCACCGGACGATGTGAACCAGGTGGCATCGGTGGAGTTGGTGCTAATCGTCTTCATGGATGGCATCACTCGTCTCGTATTATTAGGGTTGCTCGAGCTTCTGGTGGTAAAGATCGGCACAGTAAAGTTTGGACATCGAAAGGGCTCAGAGATCGACGAGTTCGGCTTTCTGTCGCTACTGCGATTCAGTTCTACGATCTTCAAGATCGGCTTGGTTTCGAACAACCCAGCAAAGCTGTTGAGTGGCTGATCGAAGCAGCTTCCGACGCCATCGCTGAACTTCCGTCTCTGAGTGGCTCTTTCCCTGAAACTCCCAGGCAACTCAGTGACGAGAAAATGGGTAGCGATGGGGCCGACCAAGGGTTTGATTCCCCGGAAATGGAGCTCGACGGTGACCCAAAAAAACACCAACAGAATCCGAGACAGCAGCTTTCATTGGCGAGGTCTGCTTGTAGTAGTAACTCAGAGACGAGCAAGGGCTCGGGATTGTCTCTCTCCCGCTCTGAAATCCTAGTGAATCGAGCGAAGGCACGTGACAGAGCAAGAGAGAGAACTGCGAAAGAGAAGGAAAGAGAGCAAGAATCTCGCGATGCTCATTGCATTCCCAACAACCCATCTTTCACTGAGCTTCTCACCGGCGGTATCAACAATAACGGCGCCAATAACACCACCAATCGGACGAATTCAGCCTCGCAAAACAATGTAGTGGAGCCGAATTTGTTCGACAAGGCAACGGCCATGGATTACTTAGCCTCTTCTGGGATTATAGCCCAACAACCGTCGTCGTCTTCATCTTCACGGCCTGGCCATAATCAATCTGCGGGATTTTCAGGGCAAATCTTTTTGGGGAATCCACACCAATTGCCAGTGTCGATTCCACAATTTAACATCTCAGCCGCTGAAAATACTCAACAAGATCGGCTTCAACATTTCTCGTTCGTCCCAGATAATTTGAACGACTATAATCTTAACTTCACCATCTCTGCCGGCCTTGCTGGTTGCAATAGGGGGACCCTTCAGTCCAATATTTCACCGTCTTTTTTGCCTTACCTCCAGAGGTTTCCTCACTTAGAGGGATCAAACGTACCCTTTTTCATCGGAGCTGCATCGCCAACGACGGCGACGACTCCCGTACAGTTGGAAAATCACCATCAGTTGACACCAGCATTGTTTGATGGTAGCTGGCAACTCTGTTATGCTGATGGAAGCCATCACTCAGATCAAAAGGGTAAAGGAAAGAACTGA

Coding sequence (CDS)

ATGGAGGTGCTGGATATTCAAGAACAAGCCTGTAGGTTTCCACGAATTGGTAATGGTAGAAATGATTCCAACAAGTTAGGGCAAAAGGGTATTGTTCAATACACCCCAGATGATGAAGAAGACAAGGAATTTTCGAAAAGGGTCGCTGTTGTTACTTCTGCTACTGTTAATCCCACCGGACGATGTGAACCAGGTGGCATCGGTGGAGTTGGTGCTAATCGTCTTCATGGATGGCATCACTCGTCTCGTATTATTAGGGTTGCTCGAGCTTCTGGTGGTAAAGATCGGCACAGTAAAGTTTGGACATCGAAAGGGCTCAGAGATCGACGAGTTCGGCTTTCTGTCGCTACTGCGATTCAGTTCTACGATCTTCAAGATCGGCTTGGTTTCGAACAACCCAGCAAAGCTGTTGAGTGGCTGATCGAAGCAGCTTCCGACGCCATCGCTGAACTTCCGTCTCTGAGTGGCTCTTTCCCTGAAACTCCCAGGCAACTCAGTGACGAGAAAATGGGTAGCGATGGGGCCGACCAAGGGTTTGATTCCCCGGAAATGGAGCTCGACGGTGACCCAAAAAAACACCAACAGAATCCGAGACAGCAGCTTTCATTGGCGAGGTCTGCTTGTAGTAGTAACTCAGAGACGAGCAAGGGCTCGGGATTGTCTCTCTCCCGCTCTGAAATCCTAGTGAATCGAGCGAAGGCACGTGACAGAGCAAGAGAGAGAACTGCGAAAGAGAAGGAAAGAGAGCAAGAATCTCGCGATGCTCATTGCATTCCCAACAACCCATCTTTCACTGAGCTTCTCACCGGCGGTATCAACAATAACGGCGCCAATAACACCACCAATCGGACGAATTCAGCCTCGCAAAACAATGTAGTGGAGCCGAATTTGTTCGACAAGGCAACGGCCATGGATTACTTAGCCTCTTCTGGGATTATAGCCCAACAACCGTCGTCGTCTTCATCTTCACGGCCTGGCCATAATCAATCTGCGGGATTTTCAGGGCAAATCTTTTTGGGGAATCCACACCAATTGCCAGTGTCGATTCCACAATTTAACATCTCAGCCGCTGAAAATACTCAACAAGATCGGCTTCAACATTTCTCGTTCGTCCCAGATAATTTGAACGACTATAATCTTAACTTCACCATCTCTGCCGGCCTTGCTGGTTGCAATAGGGGGACCCTTCAGTCCAATATTTCACCGTCTTTTTTGCCTTACCTCCAGAGGTTTCCTCACTTAGAGGGATCAAACGTACCCTTTTTCATCGGAGCTGCATCGCCAACGACGGCGACGACTCCCGTACAGTTGGAAAATCACCATCAGTTGACACCAGCATTGTTTGATGGTAGCTGGCAACTCTGTTATGCTGATGGAAGCCATCACTCAGATCAAAAGGGTAAAGGAAAGAACTGA

Protein sequence

MEVLDIQEQACRFPRIGNGRNDSNKLGQKGIVQYTPDDEEDKEFSKRVAVVTSATVNPTGRCEPGGIGGVGANRLHGWHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQFYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQLSDEKMGSDGADQGFDSPEMELDGDPKKHQQNPRQQLSLARSACSSNSETSKGSGLSLSRSEILVNRAKARDRARERTAKEKEREQESRDAHCIPNNPSFTELLTGGINNNGANNTTNRTNSASQNNVVEPNLFDKATAMDYLASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPVSIPQFNISAAENTQQDRLQHFSFVPDNLNDYNLNFTISAGLAGCNRGTLQSNISPSFLPYLQRFPHLEGSNVPFFIGAASPTTATTPVQLENHHQLTPALFDGSWQLCYADGSHHSDQKGKGKN
Homology
[Close]
BLAST of CsaV3_1G004660 vs. NCBI nr
Match: XP_011649359.1 (PREDICTED: transcription factor TCP2 [Cucumis sativus] >XP_011649361.1 PREDICTED: transcription factor TCP2 [Cucumis sativus] >XP_011649362.1 PREDICTED: transcription factor TCP2 [Cucumis sativus])

HSP 1 Score: 799.7 bits (2064), Expect = 5.5e-228
Identity = 471/471 (100.00%), Postives = 471/471 (100.00%), Query Frame = 0 

Query: 1   MEVLDIQEQACRFPRIGNGRNDSNKLGQKGIVQYTPDDEEDKEFSKRVAVVTSATVNPTG 60
           MEVLDIQEQACRFPRIGNGRNDSNKLGQKGIVQYTPDDEEDKEFSKRVAVVTSATVNPTG
Sbjct: 1   MEVLDIQEQACRFPRIGNGRNDSNKLGQKGIVQYTPDDEEDKEFSKRVAVVTSATVNPTG 60

Query: 61  RCEPGGIGGVGANRLHGWHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQ 120
           RCEPGGIGGVGANRLHGWHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQ
Sbjct: 61  RCEPGGIGGVGANRLHGWHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQ 120

Query: 121 FYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQLSDEKMGSDGADQGFD 180
           FYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQLSDEKMGSDGADQGFD
Sbjct: 121 FYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQLSDEKMGSDGADQGFD 180

Query: 181 SPEMELDGDPKKHQQNPRQQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           SPEMELDGDPKKHQQNPRQQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 SPEMELDGDPKKHQQNPRQQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXDAHCIPNNPSFTELLTGGINNNXXXXXXXXXXXXXXNNVVEPNLFDK 300
           XXXXXXXXXXXXXDAHCIPNNPSFTELLTGGINNNXXXXXXXXXXXXXXNNVVEPNLFDK
Sbjct: 241 XXXXXXXXXXXXXDAHCIPNNPSFTELLTGGINNNXXXXXXXXXXXXXXNNVVEPNLFDK 300

Query: 301 ATAMDYLASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPVSIPQFNISAAENT 360
           ATAMDYLASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPVSIPQFNISAAENT
Sbjct: 301 ATAMDYLASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPVSIPQFNISAAENT 360

Query: 361 QQDRLQHFSFVPDNLNDYNLNFTISAGLAGCNRGTLQSNISPSFLPYLQRFPHLEGSNVP 420
           QQDRLQHFSFVPDNLNDYNLNFTISAGLAGCNRGTLQSNISPSFLPYLQRFPHLEGSNVP
Sbjct: 361 QQDRLQHFSFVPDNLNDYNLNFTISAGLAGCNRGTLQSNISPSFLPYLQRFPHLEGSNVP 420

Query: 421 FFIGAASPTTATTPVQLENHHQLTPALFDGSWQLCYADGSHHSDQKGKGKN 472
           FFIGAASPTTATTPVQLENHHQLTPALFDGSWQLCYADGSHHSDQKGKGKN
Sbjct: 421 FFIGAASPTTATTPVQLENHHQLTPALFDGSWQLCYADGSHHSDQKGKGKN 471

[Close]
BLAST of CsaV3_1G004660 vs. NCBI nr
Match: XP_008444530.1 (PREDICTED: transcription factor TCP2-like [Cucumis melo] >XP_016899575.1 PREDICTED: transcription factor TCP2-like [Cucumis melo])

HSP 1 Score: 794.7 bits (2051), Expect = 1.8e-226
Identity = 468/471 (99.36%), Postives = 470/471 (99.79%), Query Frame = 0 

Query: 1   MEVLDIQEQACRFPRIGNGRNDSNKLGQKGIVQYTPDDEEDKEFSKRVAVVTSATVNPTG 60
           MEV+DIQEQACRFPRIGNGRNDSNKLGQKGIVQY+PDDEEDKEFSKRVAVVTSATVNPTG
Sbjct: 1   MEVVDIQEQACRFPRIGNGRNDSNKLGQKGIVQYSPDDEEDKEFSKRVAVVTSATVNPTG 60

Query: 61  RCEPGGIGGVGANRLHGWHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQ 120
           RCEPGGIGGVGANRLHGWHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQ
Sbjct: 61  RCEPGGIGGVGANRLHGWHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQ 120

Query: 121 FYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQLSDEKMGSDGADQGFD 180
           FYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQLSDEKMGSDGADQGFD
Sbjct: 121 FYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQLSDEKMGSDGADQGFD 180

Query: 181 SPEMELDGDPKKHQQNPRQQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           SPEMELDGDPKKHQQNPRQQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 SPEMELDGDPKKHQQNPRQQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXDAHCIPNNPSFTELLTGGINNNXXXXXXXXXXXXXXNNVVEPNLFDK 300
           XXXXXXXXXXXXXDAHCIPNNPSFTELLTGGINNNXXXXXXXXXXXXXXNNVVEPNLFDK
Sbjct: 241 XXXXXXXXXXXXXDAHCIPNNPSFTELLTGGINNNXXXXXXXXXXXXXXNNVVEPNLFDK 300

Query: 301 ATAMDYLASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPVSIPQFNISAAENT 360
           ATAMDYLASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPVSIPQFNISAAENT
Sbjct: 301 ATAMDYLASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPVSIPQFNISAAENT 360

Query: 361 QQDRLQHFSFVPDNLNDYNLNFTISAGLAGCNRGTLQSNISPSFLPYLQRFPHLEGSNVP 420
           QQDRLQHFSFVPDNLNDYNLNFTISAGLAGCNRGTLQSNISPS LPYLQRFPHLEGSNVP
Sbjct: 361 QQDRLQHFSFVPDNLNDYNLNFTISAGLAGCNRGTLQSNISPSLLPYLQRFPHLEGSNVP 420

Query: 421 FFIGAASPTTATTPVQLENHHQLTPALFDGSWQLCYADGSHHSDQKGKGKN 472
           FFIGAASPTTATTPVQLENHHQLTPALFDGSWQLCYADGSHHSDQKGKGKN
Sbjct: 421 FFIGAASPTTATTPVQLENHHQLTPALFDGSWQLCYADGSHHSDQKGKGKN 471

[Close]
BLAST of CsaV3_1G004660 vs. NCBI nr
Match: KGN63911.1 (hypothetical protein Csa_1G025920 [Cucumis sativus])

HSP 1 Score: 623.6 bits (1607), Expect = 5.4e-175
Identity = 389/389 (100.00%), Postives = 389/389 (100.00%), Query Frame = 0 

Query: 1   MEVLDIQEQACRFPRIGNGRNDSNKLGQKGIVQYTPDDEEDKEFSKRVAVVTSATVNPTG 60
           MEVLDIQEQACRFPRIGNGRNDSNKLGQKGIVQYTPDDEEDKEFSKRVAVVTSATVNPTG
Sbjct: 16  MEVLDIQEQACRFPRIGNGRNDSNKLGQKGIVQYTPDDEEDKEFSKRVAVVTSATVNPTG 75

Query: 61  RCEPGGIGGVGANRLHGWHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQ 120
           RCEPGGIGGVGANRLHGWHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQ
Sbjct: 76  RCEPGGIGGVGANRLHGWHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQ 135

Query: 121 FYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQLSDEKMGSDGADQGFD 180
           FYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQLSDEKMGSDGADQGFD
Sbjct: 136 FYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQLSDEKMGSDGADQGFD 195

Query: 181 SPEMELDGDPKKHQQNPRQQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           SPEMELDGDPKKHQQNPRQQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 196 SPEMELDGDPKKHQQNPRQQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 255

Query: 241 XXXXXXXXXXXXXDAHCIPNNPSFTELLTGGINNNXXXXXXXXXXXXXXNNVVEPNLFDK 300
           XXXXXXXXXXXXXDAHCIPNNPSFTELLTGGINNNXXXXXXXXXXXXXXNNVVEPNLFDK
Sbjct: 256 XXXXXXXXXXXXXDAHCIPNNPSFTELLTGGINNNXXXXXXXXXXXXXXNNVVEPNLFDK 315

Query: 301 ATAMDYLASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPVSIPQFNISAAENT 360
           ATAMDYLASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPVSIPQFNISAAENT
Sbjct: 316 ATAMDYLASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPVSIPQFNISAAENT 375

Query: 361 QQDRLQHFSFVPDNLNDYNLNFTISAGLA 390
           QQDRLQHFSFVPDNLNDYNLNFTISAGLA
Sbjct: 376 QQDRLQHFSFVPDNLNDYNLNFTISAGLA 404

[Close]
BLAST of CsaV3_1G004660 vs. NCBI nr
Match: XP_022954533.1 (transcription factor TCP2-like [Cucurbita moschata] >XP_022954534.1 transcription factor TCP2-like [Cucurbita moschata])

HSP 1 Score: 588.6 bits (1516), Expect = 1.9e-164
Identity = 378/475 (79.58%), Postives = 394/475 (82.95%), Query Frame = 0 

Query: 1   MEVLDIQEQACRFPRIGNGRNDSNKLGQKGIVQYTPDDEEDKEFSKRVAVVTSATVNPT- 60
           MEV++IQEQ CRF RIGN  N+SNKLGQKGIV ++PDDEE KEFS RVAVV SA+V+ T 
Sbjct: 1   MEVVEIQEQPCRFSRIGNRGNESNKLGQKGIV-HSPDDEEIKEFSARVAVVASASVSATA 60

Query: 61  GRCEPGGIG---GVGANRLHGWHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVA 120
           G  EPGG G     G NRL GWHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSV 
Sbjct: 61  GGVEPGGCGXXXXXGVNRLRGWHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVP 120

Query: 121 TAIQFYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQLSDEKMGSDGAD 180
           TAIQFYDLQDRLGFEQPSKAVEWLIEAA+DAIAELPSL G+F       SDEKMGSDG D
Sbjct: 121 TAIQFYDLQDRLGFEQPSKAVEWLIEAAADAIAELPSLHGAF-------SDEKMGSDGTD 180

Query: 181 QGFDSPEMELDGDPKKHQQNPRQQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           QGFDSPEMELDGD K          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 QGFDSPEMELDGDTK-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXDAHCIPNNPSFTELLTGGINNNXXXXXXXXXXXXXXNNVVEPN 300
           XXXXXXXXXXXXXXXXX    IPNN SFTELLTGG                  N  VEPN
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXIPNNQSFTELLTGG------GATTNRTSSAPENTAVEPN 300

Query: 301 LFDKATAMDYLASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPVSIPQFNISA 360
           LFDKATAMDY  SSGII Q+PSSSSSSRPGHNQSAGFSGQIFLGNPHQLP+S+PQFN+SA
Sbjct: 301 LFDKATAMDYFTSSGIIGQEPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPMSVPQFNVSA 360

Query: 361 AENTQQDRLQHFSFVPDNLNDYNLNFTISAGLAGCNRGTLQSNISPSFLPYLQRFPHLEG 420
            ENTQQDRLQHFSFVPDNLNDYNLNFTISAGLAGCNRGTLQSNISPS LPYLQRFPH +G
Sbjct: 361 GENTQQDRLQHFSFVPDNLNDYNLNFTISAGLAGCNRGTLQSNISPSLLPYLQRFPH-DG 420

Query: 421 SNVPFFIGAASPTTATTPVQLENHHQLTPALFDGSWQLCYADGSHHSDQKGKGKN 472
           SN+PFFIGA SP  ATTPVQLENH      LFDGSWQLCYADG+HHSDQKGKGKN
Sbjct: 421 SNLPFFIGAPSP--ATTPVQLENHQH----LFDGSWQLCYADGTHHSDQKGKGKN 449

[Close]
BLAST of CsaV3_1G004660 vs. NCBI nr
Match: XP_022994806.1 (transcription factor TCP2-like [Cucurbita maxima])

HSP 1 Score: 586.3 bits (1510), Expect = 9.5e-164
Identity = 378/474 (79.75%), Postives = 394/474 (83.12%), Query Frame = 0 

Query: 1   MEVLDIQEQACRFPRIGNGRNDSNKLGQKGIVQYTPDDEEDKEFSKRVAVVTSATVNPT- 60
           MEV++IQEQ CRF RIGN  N+SNKLGQKGIV ++PDDEE KEFSKRVAVV SA+V+ T 
Sbjct: 1   MEVVEIQEQPCRFSRIGNRGNESNKLGQKGIV-HSPDDEEIKEFSKRVAVVASASVSATA 60

Query: 61  GRCEPG--GIGGVGANRLHGWHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVAT 120
           G  EPG  G GG G NRL GWHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSV T
Sbjct: 61  GGVEPGDCGGGGGGVNRLRGWHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVPT 120

Query: 121 AIQFYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQLSDEKMGSDGADQ 180
           AIQFYDLQDRLGFEQPSKAVEWLIEAA+DAIAELPSL G+F       SDEKMGSDG DQ
Sbjct: 121 AIQFYDLQDRLGFEQPSKAVEWLIEAAADAIAELPSLHGAF-------SDEKMGSDGTDQ 180

Query: 181 GFDSPEMELDGDPKKHQQNPRQQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           GFDSPEMELD              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 GFDSPEMELD-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXDAHCIPNNPSFTELLTGGINNNXXXXXXXXXXXXXXNNVVEPNL 300
           XXXXXXXXXXXXXXXX    IPNN SFTELLTGG                  N  VEPNL
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXIPNNQSFTELLTGG------GATTNRTSSAPENTAVEPNL 300

Query: 301 FDKATAMDYLASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPVSIPQFNISAA 360
           +DKATAMDYL SSGII Q+PSSSSSSRPGHNQSAGFSGQIFLGNPHQLP+S+PQFN+SA 
Sbjct: 301 YDKATAMDYLTSSGIIGQEPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPMSVPQFNVSAG 360

Query: 361 ENTQQDRLQHFSFVPDNLNDYNLNFTISAGLAGCNRGTLQSNISPSFLPYLQRFPHLEGS 420
           ENTQQDRLQHFSFVPDNLNDYNLNFTISAGLAGCNRGTLQSNISPS LPYLQRFPH +GS
Sbjct: 361 ENTQQDRLQHFSFVPDNLNDYNLNFTISAGLAGCNRGTLQSNISPSLLPYLQRFPH-DGS 420

Query: 421 NVPFFIGAASPTTATTPVQLENHHQLTPALFDGSWQLCYADGSHHSDQKGKGKN 472
           NVPFFIGA SP  ATTPVQLENH      LFDGSWQLCYADG+HHSDQKGKGKN
Sbjct: 421 NVPFFIGAPSP--ATTPVQLENHQH----LFDGSWQLCYADGTHHSDQKGKGKN 448

[Close]
BLAST of CsaV3_1G004660 vs. TAIR10
Match: AT4G18390.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2)

HSP 1 Score: 149.4 bits (376), Expect = 5.4e-36
Identity = 177/409 (43.28%), Postives = 212/409 (51.83%), Query Frame = 0 

Query: 73  NRLHGWHH-SSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQFYDLQDRLGFE 132
           NRL  WHH SSRIIRV+RASGGKDRHSKV TSKG RDRRVRLSV+TA+QFYDLQDRLG++
Sbjct: 21  NRLSRWHHNSSRIIRVSRASGGKDRHSKVLTSKGPRDRRVRLSVSTALQFYDLQDRLGYD 80

Query: 133 QPSKAVEWLIEAASDAIAELPSLSGSFPETPRQLSDEKMGSDGADQGFDSPEMELDGDPK 192
           QPSKAVEWLI+AA D+I+ELPSL+ +   T                           D +
Sbjct: 81  QPSKAVEWLIKAAEDSISELPSLNNTHFPT---------------------------DDE 140

Query: 193 KHQQNPRQQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 252
            HQ    Q L            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 141 NHQ---NQTLTTVAANSLSKSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 200

Query: 253 XXDAHCIPNNPSFTELLTGG---INNNXXXXXXXXXXXXXXNNVVEPNLFDKATAMDYLA 312
           XXD     N+ SFT+LL  G   +N+N                         ++ M+Y +
Sbjct: 201 XXD----HNHTSFTDLLNSGSDPVNSNRQWMASA----------------PSSSPMEYFS 260

Query: 313 SSGII--AQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPVSIPQFNISAAENTQQDRLQ 372
           S  I+   QQ     S+      S                  +P   IS AE+       
Sbjct: 261 SGLILGSGQQTHFPISTNSHPFSSISXXXXXXXXXXXXXXSFVPDHLISPAESNGGAFNL 320

Query: 373 HFSFVPDNLNDYNLNFTISAGLAGCNRGTLQSNIS---PSFLPYLQRFPHLEGSNVPFFI 432
            F+    +     ++     G +G NRGTLQSN +    SFL  LQRFP  E    P F+
Sbjct: 321 DFNMSTPSGAGAAVSAASGGGFSGFNRGTLQSNSTNQHQSFLANLQRFPTSESGGGPQFL 365

Query: 433 GAASPTTATTPVQLENHHQLTPALFDGSWQLCYADGSHH-SDQKGKGKN 472
             A P         ENHH       +  +QL Y +G  + S+ KGKGKN
Sbjct: 381 FGALPA--------ENHHH------NHQFQLYYENGCRNSSEHKGKGKN 365

[Close]
BLAST of CsaV3_1G004660 vs. TAIR10
Match: AT1G30210.1 (TEOSINTE BRANCHED 1, cycloidea, and PCF family 24)

HSP 1 Score: 133.7 bits (335), Expect = 3.1e-31
Identity = 67/85 (78.82%), Postives = 77/85 (90.59%), Query Frame = 0 

Query: 75  LHGWHH-SSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQFYDLQDRLGFEQP 134
           +  W++ SSRIIRV+RASGGKDRHSKV TSKGLRDRR+RLSVATAIQFYDLQDRLGF+QP
Sbjct: 31  MRNWNNPSSRIIRVSRASGGKDRHSKVLTSKGLRDRRIRLSVATAIQFYDLQDRLGFDQP 90

Query: 135 SKAVEWLIEAASDAIAELPSLSGSF 159
           SKAVEWLI AASD+I +LP L+ +F
Sbjct: 91  SKAVEWLINAASDSITDLPLLNTNF 115

[Close]
BLAST of CsaV3_1G004660 vs. TAIR10
Match: AT3G02150.2 (plastid transcription factor 1)

HSP 1 Score: 109.0 bits (271), Expect = 8.1e-24
Identity = 56/84 (66.67%), Postives = 66/84 (78.57%), Query Frame = 0 

Query: 83  RIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQFYDLQDRLGFEQPSKAVEWLIE 142
           RI+RV+RA GGKDRHSKV T +GLRDRRVRLSV TAIQ YDLQ+RLG +QPSKAV+WL++
Sbjct: 64  RIVRVSRAFGGKDRHSKVCTLRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLD 123

Query: 143 AASDAIAELPSLSGSFPETPRQLS 167
           AA + I ELP L    P +P   S
Sbjct: 124 AAKEEIDELPPL----PISPENFS 143

[Close]
BLAST of CsaV3_1G004660 vs. TAIR10
Match: AT5G60970.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5)

HSP 1 Score: 107.1 bits (266), Expect = 3.1e-23
Identity = 53/83 (63.86%), Postives = 63/83 (75.90%), Query Frame = 0 

Query: 83  RIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQFYDLQDRLGFEQPSKAVEWLIE 142
           RI+RV+R  GGKDRHSKV T +GLRDRR+RLSV TAIQ YDLQDRLG  QPSK ++WL+E
Sbjct: 53  RIVRVSRTFGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVIDWLLE 112

Query: 143 AASDAIAELPSLSGSFPETPRQL 166
           AA D + +LP L   FP    Q+
Sbjct: 113 AAKDDVDKLPPL--QFPHGFNQM 133

[Close]
BLAST of CsaV3_1G004660 vs. TAIR10
Match: AT5G08070.1 (TCP domain protein 17)

HSP 1 Score: 103.2 bits (256), Expect = 4.4e-22
Identity = 53/92 (57.61%), Postives = 66/92 (71.74%), Query Frame = 0 

Query: 80  HSSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQFYDLQDRLGFEQPSKAVEW 139
           ++ RI+RV+RA GGKDRHSKV T +GLRDRR+RLSV TAIQ YDLQ+RLG  QPSK ++W
Sbjct: 20  NNPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQERLGLSQPSKVIDW 79

Query: 140 LIEAASDAIAELPSLSGSFPETPRQLSDEKMG 172
           L+E A + +  LP L   FP    QL+    G
Sbjct: 80  LLEVAKNDVDLLPPL--QFPPGFHQLNPNLTG 109

[Close]
BLAST of CsaV3_1G004660 vs. Swiss-Prot
Match: sp|Q93V43|TCP2_ARATH (Transcription factor TCP2 OS=Arabidopsis thaliana OX=3702 GN=TCP2 PE=1 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 9.7e-35
Identity = 177/409 (43.28%), Postives = 212/409 (51.83%), Query Frame = 0 

Query: 73  NRLHGWHH-SSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQFYDLQDRLGFE 132
           NRL  WHH SSRIIRV+RASGGKDRHSKV TSKG RDRRVRLSV+TA+QFYDLQDRLG++
Sbjct: 21  NRLSRWHHNSSRIIRVSRASGGKDRHSKVLTSKGPRDRRVRLSVSTALQFYDLQDRLGYD 80

Query: 133 QPSKAVEWLIEAASDAIAELPSLSGSFPETPRQLSDEKMGSDGADQGFDSPEMELDGDPK 192
           QPSKAVEWLI+AA D+I+ELPSL+ +   T                           D +
Sbjct: 81  QPSKAVEWLIKAAEDSISELPSLNNTHFPT---------------------------DDE 140

Query: 193 KHQQNPRQQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 252
            HQ    Q L            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 141 NHQ---NQTLTTVAANSLSKSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 200

Query: 253 XXDAHCIPNNPSFTELLTGG---INNNXXXXXXXXXXXXXXNNVVEPNLFDKATAMDYLA 312
           XXD     N+ SFT+LL  G   +N+N                         ++ M+Y +
Sbjct: 201 XXD----HNHTSFTDLLNSGSDPVNSNRQWMASA----------------PSSSPMEYFS 260

Query: 313 SSGII--AQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPVSIPQFNISAAENTQQDRLQ 372
           S  I+   QQ     S+      S                  +P   IS AE+       
Sbjct: 261 SGLILGSGQQTHFPISTNSHPFSSISXXXXXXXXXXXXXXSFVPDHLISPAESNGGAFNL 320

Query: 373 HFSFVPDNLNDYNLNFTISAGLAGCNRGTLQSNIS---PSFLPYLQRFPHLEGSNVPFFI 432
            F+    +     ++     G +G NRGTLQSN +    SFL  LQRFP  E    P F+
Sbjct: 321 DFNMSTPSGAGAAVSAASGGGFSGFNRGTLQSNSTNQHQSFLANLQRFPTSESGGGPQFL 365

Query: 433 GAASPTTATTPVQLENHHQLTPALFDGSWQLCYADGSHH-SDQKGKGKN 472
             A P         ENHH       +  +QL Y +G  + S+ KGKGKN
Sbjct: 381 FGALPA--------ENHHH------NHQFQLYYENGCRNSSEHKGKGKN 365

[Close]
BLAST of CsaV3_1G004660 vs. Swiss-Prot
Match: sp|Q9C758|TCP24_ARATH (Transcription factor TCP24 OS=Arabidopsis thaliana OX=3702 GN=TCP24 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 5.5e-30
Identity = 67/85 (78.82%), Postives = 77/85 (90.59%), Query Frame = 0 

Query: 75  LHGWHH-SSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQFYDLQDRLGFEQP 134
           +  W++ SSRIIRV+RASGGKDRHSKV TSKGLRDRR+RLSVATAIQFYDLQDRLGF+QP
Sbjct: 31  MRNWNNPSSRIIRVSRASGGKDRHSKVLTSKGLRDRRIRLSVATAIQFYDLQDRLGFDQP 90

Query: 135 SKAVEWLIEAASDAIAELPSLSGSF 159
           SKAVEWLI AASD+I +LP L+ +F
Sbjct: 91  SKAVEWLINAASDSITDLPLLNTNF 115

[Close]
BLAST of CsaV3_1G004660 vs. Swiss-Prot
Match: sp|A2XMN1|PCF6_ORYSI (Transcription factor PCF6 OS=Oryza sativa subsp. indica OX=39946 GN=PCF6 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 8.3e-26
Identity = 61/74 (82.43%), Postives = 68/74 (91.89%), Query Frame = 0 

Query: 81  SSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQFYDLQDRLGFEQPSKAVEWL 140
           +SRI RV RA+GGKDRHSKV+T+KG+RDRRVRLSVATAIQFYDLQDRLGF+QPSKA+EWL
Sbjct: 41  ASRIYRV-RATGGKDRHSKVYTAKGIRDRRVRLSVATAIQFYDLQDRLGFDQPSKAIEWL 100

Query: 141 IEAASDAIAELPSL 155
           I AAS AI  LPSL
Sbjct: 101 INAASPAIDTLPSL 113

[Close]
BLAST of CsaV3_1G004660 vs. Swiss-Prot
Match: sp|Q10CE8|PCF6_ORYSJ (Transcription factor PCF6 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF6 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 8.3e-26
Identity = 61/74 (82.43%), Postives = 68/74 (91.89%), Query Frame = 0 

Query: 81  SSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQFYDLQDRLGFEQPSKAVEWL 140
           +SRI RV RA+GGKDRHSKV+T+KG+RDRRVRLSVATAIQFYDLQDRLGF+QPSKA+EWL
Sbjct: 41  ASRIYRV-RATGGKDRHSKVYTAKGIRDRRVRLSVATAIQFYDLQDRLGFDQPSKAIEWL 100

Query: 141 IEAASDAIAELPSL 155
           I AAS AI  LPSL
Sbjct: 101 INAASPAIDTLPSL 113

[Close]
BLAST of CsaV3_1G004660 vs. Swiss-Prot
Match: sp|A2ZMR9|PCF8_ORYSI (Transcription factor PCF8 OS=Oryza sativa subsp. indica OX=39946 GN=PCF8 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.5e-22
Identity = 58/77 (75.32%), Postives = 64/77 (83.12%), Query Frame = 0 

Query: 83  RIIRVAR-ASGGKDRHSKVWTSKGLRDRRVRLSVATAIQFYDLQDRLGFEQPSKAVEWLI 142
           R  RVAR A+GGKDRHSKV TS+GLRDRRVRLSV TAI FYD+QDRLG +QPSKA+EWLI
Sbjct: 35  RTSRVARAAAGGKDRHSKVVTSRGLRDRRVRLSVPTAIAFYDIQDRLGVDQPSKAIEWLI 94

Query: 143 EAASDAIAELPSLSGSF 159
            AA+ AI  LPSL  SF
Sbjct: 95  RAAAAAIDALPSLDCSF 111

[Close]
BLAST of CsaV3_1G004660 vs. TrEMBL
Match: tr|A0A1S4DV39|A0A1S4DV39_CUCME (transcription factor TCP2-like OS=Cucumis melo OX=3656 GN=LOC103487819 PE=4 SV=1)

HSP 1 Score: 794.7 bits (2051), Expect = 1.2e-226
Identity = 468/471 (99.36%), Postives = 470/471 (99.79%), Query Frame = 0 

Query: 1   MEVLDIQEQACRFPRIGNGRNDSNKLGQKGIVQYTPDDEEDKEFSKRVAVVTSATVNPTG 60
           MEV+DIQEQACRFPRIGNGRNDSNKLGQKGIVQY+PDDEEDKEFSKRVAVVTSATVNPTG
Sbjct: 1   MEVVDIQEQACRFPRIGNGRNDSNKLGQKGIVQYSPDDEEDKEFSKRVAVVTSATVNPTG 60

Query: 61  RCEPGGIGGVGANRLHGWHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQ 120
           RCEPGGIGGVGANRLHGWHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQ
Sbjct: 61  RCEPGGIGGVGANRLHGWHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQ 120

Query: 121 FYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQLSDEKMGSDGADQGFD 180
           FYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQLSDEKMGSDGADQGFD
Sbjct: 121 FYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQLSDEKMGSDGADQGFD 180

Query: 181 SPEMELDGDPKKHQQNPRQQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           SPEMELDGDPKKHQQNPRQQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 SPEMELDGDPKKHQQNPRQQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXDAHCIPNNPSFTELLTGGINNNXXXXXXXXXXXXXXNNVVEPNLFDK 300
           XXXXXXXXXXXXXDAHCIPNNPSFTELLTGGINNNXXXXXXXXXXXXXXNNVVEPNLFDK
Sbjct: 241 XXXXXXXXXXXXXDAHCIPNNPSFTELLTGGINNNXXXXXXXXXXXXXXNNVVEPNLFDK 300

Query: 301 ATAMDYLASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPVSIPQFNISAAENT 360
           ATAMDYLASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPVSIPQFNISAAENT
Sbjct: 301 ATAMDYLASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPVSIPQFNISAAENT 360

Query: 361 QQDRLQHFSFVPDNLNDYNLNFTISAGLAGCNRGTLQSNISPSFLPYLQRFPHLEGSNVP 420
           QQDRLQHFSFVPDNLNDYNLNFTISAGLAGCNRGTLQSNISPS LPYLQRFPHLEGSNVP
Sbjct: 361 QQDRLQHFSFVPDNLNDYNLNFTISAGLAGCNRGTLQSNISPSLLPYLQRFPHLEGSNVP 420

Query: 421 FFIGAASPTTATTPVQLENHHQLTPALFDGSWQLCYADGSHHSDQKGKGKN 472
           FFIGAASPTTATTPVQLENHHQLTPALFDGSWQLCYADGSHHSDQKGKGKN
Sbjct: 421 FFIGAASPTTATTPVQLENHHQLTPALFDGSWQLCYADGSHHSDQKGKGKN 471

[Close]
BLAST of CsaV3_1G004660 vs. TrEMBL
Match: tr|A0A0A0LV70|A0A0A0LV70_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025920 PE=4 SV=1)

HSP 1 Score: 623.6 bits (1607), Expect = 3.6e-175
Identity = 389/389 (100.00%), Postives = 389/389 (100.00%), Query Frame = 0 

Query: 1   MEVLDIQEQACRFPRIGNGRNDSNKLGQKGIVQYTPDDEEDKEFSKRVAVVTSATVNPTG 60
           MEVLDIQEQACRFPRIGNGRNDSNKLGQKGIVQYTPDDEEDKEFSKRVAVVTSATVNPTG
Sbjct: 16  MEVLDIQEQACRFPRIGNGRNDSNKLGQKGIVQYTPDDEEDKEFSKRVAVVTSATVNPTG 75

Query: 61  RCEPGGIGGVGANRLHGWHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQ 120
           RCEPGGIGGVGANRLHGWHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQ
Sbjct: 76  RCEPGGIGGVGANRLHGWHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQ 135

Query: 121 FYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQLSDEKMGSDGADQGFD 180
           FYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQLSDEKMGSDGADQGFD
Sbjct: 136 FYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQLSDEKMGSDGADQGFD 195

Query: 181 SPEMELDGDPKKHQQNPRQQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           SPEMELDGDPKKHQQNPRQQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 196 SPEMELDGDPKKHQQNPRQQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 255

Query: 241 XXXXXXXXXXXXXDAHCIPNNPSFTELLTGGINNNXXXXXXXXXXXXXXNNVVEPNLFDK 300
           XXXXXXXXXXXXXDAHCIPNNPSFTELLTGGINNNXXXXXXXXXXXXXXNNVVEPNLFDK
Sbjct: 256 XXXXXXXXXXXXXDAHCIPNNPSFTELLTGGINNNXXXXXXXXXXXXXXNNVVEPNLFDK 315

Query: 301 ATAMDYLASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPVSIPQFNISAAENT 360
           ATAMDYLASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPVSIPQFNISAAENT
Sbjct: 316 ATAMDYLASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPVSIPQFNISAAENT 375

Query: 361 QQDRLQHFSFVPDNLNDYNLNFTISAGLA 390
           QQDRLQHFSFVPDNLNDYNLNFTISAGLA
Sbjct: 376 QQDRLQHFSFVPDNLNDYNLNFTISAGLA 404

[Close]
BLAST of CsaV3_1G004660 vs. TrEMBL
Match: tr|A0A2I4EJY3|A0A2I4EJY3_9ROSI (transcription factor TCP2-like OS=Juglans regia OX=51240 GN=LOC108990257 PE=4 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 2.9e-100
Identity = 287/491 (58.45%), Postives = 334/491 (68.02%), Query Frame = 0 

Query: 1   MEVLDIQE-QACRFPRIGNGRNDSNKLGQKGIVQYTPDDEEDKEFSKRVAVVTSATVNPT 60
           MEV DIQ+  AC+FPRIGNGRNDS K+G KG+  + PDDEED E +              
Sbjct: 1   MEVEDIQQATACKFPRIGNGRNDSGKIGSKGVPDHYPDDEEDGELN-------------- 60

Query: 61  GRCEPGGIGGVGANRLHGWHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAI 120
            R  PG   G   NRL GW+H SRIIRV RASGGKDRHSKVWTSKGLRDRRVRLSV TAI
Sbjct: 61  -RVGPGSDAGGNVNRLRGWNH-SRIIRVPRASGGKDRHSKVWTSKGLRDRRVRLSVTTAI 120

Query: 121 QFYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQLSDEKMGSDGADQGF 180
           QFYDLQDRLG +QPSKAVEWLI+AA+D+IAELPSL+ +FP+TP+QLSDEK  + G +QGF
Sbjct: 121 QFYDLQDRLGVDQPSKAVEWLIKAAADSIAELPSLN-TFPDTPKQLSDEKRANGGTEQGF 180

Query: 181 DSPEMELDGDPKKHQQNPRQQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           DS  +ELDGDP  + Q      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 DSAAVELDGDP--NFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXDAHCIPNNPSFTELLTGGI---NNNXXXXXXXXXXXXXXNNVVEPN 300
           XXXXXXXXX     + + I +N SFTELLTGGI   NNN              N   E N
Sbjct: 241 XXXXXXXXXSRIAQNVNQISHNASFTELLTGGISSVNNN----ANSPTRSAHQNPGCEAN 300

Query: 301 LFDKATAMDYLASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPVSIPQFNISA 360
           LF KA A  +  S+ +          S   H+ S+GFSGQI LGN   + +S+P FN+S 
Sbjct: 301 LFHKAAARQWTGSTPMDYFDSGLLGPSSRAHH-SSGFSGQIHLGNSLPMTMSVPAFNLSG 360

Query: 361 AENTQQDRLQHFSFVPDNL--------------NDYNLNFTISAG-LAGC-NRGTLQSNI 420
             +++   LQHFSFVPD L               DYNLNFTIS+G LAG  NRGTLQSN 
Sbjct: 361 DNHSE---LQHFSFVPDPLIPVASATSQPGGGPVDYNLNFTISSGQLAGYNNRGTLQSN- 420

Query: 421 SPSFLPYLQRFPHLEGSNVPFFIGAASPTTATTPVQLENHHQLTPALFDGSWQLCYADGS 472
           SPS LP+LQRF  ++G NVPFF+  AS  +A+  ++  +HHQ +P +FDG  QL Y D S
Sbjct: 421 SPSLLPHLQRFSPIDGPNVPFFM--ASAPSASLAMENHHHHQFSPGIFDGRLQLSYGDAS 461

[Close]
BLAST of CsaV3_1G004660 vs. TrEMBL
Match: tr|A0A0D2UNY1|A0A0D2UNY1_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_011G046000 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 2.4e-99
Identity = 304/497 (61.17%), Postives = 345/497 (69.42%), Query Frame = 0 

Query: 1   MEVLDIQEQACRFPRIGNGRNDSNKLGQKGIVQYTPDDEEDKEFSKRVAVVTSATVNPTG 60
           MEV +IQ Q C+F  +GNGRN+++K+GQKG     PDDEED E  KR A    A      
Sbjct: 1   MEVDEIQTQTCKFSTVGNGRNETSKIGQKGSDSNFPDDEEDGELIKRAAATAVAN----- 60

Query: 61  RCEPGGIGG-VGANRLHGWHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAI 120
               GG+   +G N L GWH+SSRIIRV+RASGGKDRHSKVWTSKGLRDRRVRLSV TAI
Sbjct: 61  ----GGVADTIGTNSLRGWHNSSRIIRVSRASGGKDRHSKVWTSKGLRDRRVRLSVTTAI 120

Query: 121 QFYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQLSDEKMGSDGADQGF 180
           QFYDLQDRLG++QPSKAVEWLI+AASDAIAELPSL+ SFP+TP+QLSDEK GS G +QGF
Sbjct: 121 QFYDLQDRLGYDQPSKAVEWLIKAASDAIAELPSLNTSFPDTPKQLSDEKRGSGGIEQGF 180

Query: 181 DSPEMELDGDPKKHQQNPRQQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           DS E+ELDGDP  +QQ      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 DSAEVELDGDPSNYQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXDAHCIPNNPSFTELLTGGINN---NXXXXXXXXXXXXXXNNVVEPN 300
           XXXXXXXXXX        I  N SFTELLT GI N    XXXXXXXXXXXXX +   E +
Sbjct: 241 XXXXXXXXXXVSP-----ISQNSSFTELLTSGIGNVSXXXXXXXXXXXXXXXQDPSAESD 300

Query: 301 LFDKA---------TAMDYLASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPV 360
            + KA         T MDY A SG++   PSSS     GH+ S    GQI L N  Q P+
Sbjct: 301 FYQKANSTARLWPVTPMDYFA-SGLLG--PSSSR----GHHSSGFPGGQIHLVNSLQQPM 360

Query: 361 SIPQFNISAAENTQQDRLQHFSFV--PDNL-----------NDYNLNFTISAGLAGCNRG 420
           + P F +S  EN Q+  +QHFSFV  PD+L            DYNLNFTIS+GLAG NRG
Sbjct: 361 TTPPFTVS-GENHQE--MQHFSFVPNPDHLIPVATTQPGQGVDYNLNFTISSGLAGFNRG 420

Query: 421 TLQSNISPSFLPYLQRFPHLEGSNVPFFIGAASPTTATTPVQLENHHQLTPALFDGSWQL 472
           TLQSN SP   P+LQRF  ++GS+ P +IG       T PV+  +HHQ T  L DG  QL
Sbjct: 421 TLQSN-SPFLPPHLQRFSSIDGSS-PLYIG-------TPPVENHHHHQFTAGL-DGRLQL 463

[Close]
BLAST of CsaV3_1G004660 vs. TrEMBL
Match: tr|A0A1U8K5Z2|A0A1U8K5Z2_GOSHI (transcription factor TCP2 OS=Gossypium hirsutum OX=3635 GN=LOC107913803 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.6e-98
Identity = 307/497 (61.77%), Postives = 348/497 (70.02%), Query Frame = 0 

Query: 1   MEVLDIQEQACRFPRIGNGRNDSNKLGQKGIVQYTPDDEEDKEFSKRVAVVTSATVNPTG 60
           MEV +IQ Q C+F  +GNGRN+++K+GQKG     PDDEED E  KR A    A      
Sbjct: 1   MEVDEIQTQTCKFSTVGNGRNETSKIGQKGSDSNFPDDEEDGELIKRAAATAVAN----- 60

Query: 61  RCEPGGIGG-VGANRLHGWHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAI 120
               GG+   +G N L GWH+SSRIIRV+RASGGKDRHSKVWTSKGLRDRRVRLSV TAI
Sbjct: 61  ----GGVADTIGTNSLRGWHNSSRIIRVSRASGGKDRHSKVWTSKGLRDRRVRLSVTTAI 120

Query: 121 QFYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQLSDEKMGSDGADQGF 180
           QFYDLQDRLG++QPSKAVEWLI+AASDAIAELPSL+ SFP+TP+QLSDEK GS G +QGF
Sbjct: 121 QFYDLQDRLGYDQPSKAVEWLIKAASDAIAELPSLNTSFPDTPKQLSDEKRGSGGIEQGF 180

Query: 181 DSPEMELDGDPKKHQQNPRQQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           DS E+ELDGDP  +     QQ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 DSAEVELDGDPSNY-----QQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXDAHCIPNNPSFTELLTGGINN---NXXXXXXXXXXXXXXNNVVEPN 300
           XXXXXXXXXXXXXX    I  N SFTELLT GI N    XXXXXXXXXXXXX +   E +
Sbjct: 241 XXXXXXXXXXXXXXXXXXISQNSSFTELLTSGIGNXXXXXXXXXXXXXXXXXQDPSAESD 300

Query: 301 LFDKA---------TAMDYLASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPV 360
            + KA         T MDY A SG++   PSSS     GH+ S    GQI L N  Q P+
Sbjct: 301 FYQKANSTARLWPVTPMDYFA-SGLLG--PSSSR----GHHSSGFPGGQIHLVNSLQQPM 360

Query: 361 SIPQFNISAAENTQQDRLQHFSFV--PDNL-----------NDYNLNFTISAGLAGCNRG 420
           + P F +S  EN Q+  +QHFSFV  PD+L            DYNLNFTIS+GLAG NRG
Sbjct: 361 TTPPFTVS-GENHQE--MQHFSFVPNPDHLIPVATTQPGQGVDYNLNFTISSGLAGFNRG 420

Query: 421 TLQSNISPSFLPYLQRFPHLEGSNVPFFIGAASPTTATTPVQLENHHQLTPALFDGSWQL 472
           TLQSN SP    +LQRF  ++GS+ P +IG       T PV+  +HHQ T  L DG  QL
Sbjct: 421 TLQSN-SPFLPHHLQRFSSIDGSS-PLYIG-------TPPVENHHHHQFTAGL-DGRLQL 463

The following BLAST results are available for this feature:
BLAST of CsaV3_1G004660 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011649359.15.5e-228100.00PREDICTED: transcription factor TCP2 [Cucumis sativus] >XP_011649361.1 PREDICTED... [more]
XP_008444530.11.8e-22699.36PREDICTED: transcription factor TCP2-like [Cucumis melo] >XP_016899575.1 PREDICT... [more]
KGN63911.15.4e-175100.00hypothetical protein Csa_1G025920 [Cucumis sativus][more]
XP_022954533.11.9e-16479.58transcription factor TCP2-like [Cucurbita moschata] >XP_022954534.1 transcriptio... [more]
XP_022994806.19.5e-16479.75transcription factor TCP2-like [Cucurbita maxima][more]
BLAST of CsaV3_1G004660 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G18390.15.4e-3643.28TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2[more]
AT1G30210.13.1e-3178.82TEOSINTE BRANCHED 1, cycloidea, and PCF family 24[more]
AT3G02150.28.1e-2466.67plastid transcription factor 1[more]
AT5G60970.13.1e-2363.86TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5[more]
AT5G08070.14.4e-2257.61TCP domain protein 17[more]
BLAST of CsaV3_1G004660 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q93V43|TCP2_ARATH9.7e-3543.28Transcription factor TCP2 OS=Arabidopsis thaliana OX=3702 GN=TCP2 PE=1 SV=1[more]
sp|Q9C758|TCP24_ARATH5.5e-3078.82Transcription factor TCP24 OS=Arabidopsis thaliana OX=3702 GN=TCP24 PE=1 SV=1[more]
sp|A2XMN1|PCF6_ORYSI8.3e-2682.43Transcription factor PCF6 OS=Oryza sativa subsp. indica OX=39946 GN=PCF6 PE=4 SV... [more]
sp|Q10CE8|PCF6_ORYSJ8.3e-2682.43Transcription factor PCF6 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF6 PE=2 ... [more]
sp|A2ZMR9|PCF8_ORYSI1.5e-2275.32Transcription factor PCF8 OS=Oryza sativa subsp. indica OX=39946 GN=PCF8 PE=4 SV... [more]
BLAST of CsaV3_1G004660 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4DV39|A0A1S4DV39_CUCME1.2e-22699.36transcription factor TCP2-like OS=Cucumis melo OX=3656 GN=LOC103487819 PE=4 SV=1[more]
tr|A0A0A0LV70|A0A0A0LV70_CUCSA3.6e-175100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025920 PE=4 SV=1[more]
tr|A0A2I4EJY3|A0A2I4EJY3_9ROSI2.9e-10058.45transcription factor TCP2-like OS=Juglans regia OX=51240 GN=LOC108990257 PE=4 SV... [more]
tr|A0A0D2UNY1|A0A0D2UNY1_GOSRA2.4e-9961.17Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_011G046000 PE=4 ... [more]
tr|A0A1U8K5Z2|A0A1U8K5Z2_GOSHI1.6e-9861.77transcription factor TCP2 OS=Gossypium hirsutum OX=3635 GN=LOC107913803 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR017887TF_TCP_subgr
IPR017888CYC/TB1_R_domain
IPR005333Transcription_factor_TCP
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0016043 cellular component organization
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:0006952 defense response
biological_process GO:0048827 phyllome development
biological_process GO:0009791 post-embryonic development
biological_process GO:0044238 primary metabolic process
biological_process GO:0031323 regulation of cellular metabolic process
biological_process GO:0048608 reproductive structure development
biological_process GO:0007165 signal transduction
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003674 molecular_function
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G004660.1CsaV3_1G004660.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005333Transcription factor, TCPPFAMPF03634TCPcoord: 92..247
e-value: 1.1E-40
score: 139.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 314..337
NoneNo IPR availablePANTHERPTHR31072FAMILY NOT NAMEDcoord: 1..471
NoneNo IPR availablePANTHERPTHR31072:SF2TRANSCRIPTION FACTOR TCP24coord: 1..471
IPR017888CYC/TB1, R domainPROSITEPS51370Rcoord: 228..246
score: 9.148
IPR017887Transcription factor TCP subgroupPROSITEPS51369TCPcoord: 93..151
score: 30.385