CsaV3_1G004520 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G004520
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Thylakoid lumenal P17.1 protein
Location	chr1 : 2851729 .. 2853718 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAACATTGTAAACAATTCACCATAGTTTGATAAACCGTCGGTAAATAATTCAATTGAAATTTAAGGTAATTTTAAAATTTTTTAAATATACGTATAAATAATATTTAATGGGCCATAGAGAAAATTCTGTTATGTTGACGATTATCCGTTCATCAAAATTAGCAATTGGCCGACGAAGATTCTCGTCCGACCTCTCAGTCAGTACCCAAAATCTCTGTACCCACCGTGAGAATCAAACTCTTTTCTCCCTTCCATGGCTGCACTACCTTCTACGGCGGCTCTTCACGTTCTCCCACATCTCCCGTTGCTAAAACCTGAAGTTCCTCTTCTTTTTTGCTGTTCTTGTTCTTCAGCTGCAACCACTTCCTCCACTGTCTCCACTTCCGCGGCTGCGATTCACCCAATTGACCCTCTTATTCACCCCCTTTTGCTCTTCGACAGTTTCGATGCCCCAATTGACACCCAAACTTTTCTTGCTACTCTCAGTGTCTTGGTTGCCATTTCTCTTTCGCTCTTTCTTGGTCTTAAGGTATCACTTCTTTGAATTCTCTTTCGTGTTATGGTTATGGCCACTCCAGGGCTTTCTGATGAATGTAATAGTTTGAAAGTTGTGAGGATTTTGGTTTGATTCTAACGGTTGTTGGTTTGGATTTAATTCTGCAGGGTGGTCCGGTGCCTTGTGAACGTTGTGCTGGAAATGGTAAGTATAAACAGTATCCAATATCGATGGAAAGTGGCAAAGTTTACTGTGACCTAAACTGTATGCATTTTCACTTCTCAGATTCATATTAATTAGCAACATTTCAAGGAGTCTAGAATTTGCAAATCCCATTGAGTATAGAAGTAGCTATTAACTTCTACTTGATATAGTTGGTAATCTGTGGAGGCTAATTCCCTATAAGCCAATGCTTTAGTCTAAAAAGTTTCTTAAACATCTCCATTACTCAATAATGTAGCTAACTATGACAATGTGCAGGCGGCACAAAATGTGTTTTCTGTGACAGTGGTAAGATGCAGCAACAGTCAGGATTAATTGACTGCAAAGTGTGTAAAGGTGCAGGTATTTACTTCAAATTACTTCAAATTACTTCAAATTACATCAAGTATTCATTGTTTTTTTACCACATCTGATGACCAGCCTATGCCCTAAAAGATGTTGAATGTTGGGGAAAACACAATGCATTTGTGTAGAAGTTTTACTTTTAGTCCAATGACCACTTTTTGAGAGAGATATCAAAATTGACCTGTTTTTAAAAAAATTTCAAAATGGCTTGATCAAGCTGTCCATTTATTCTATAGAAGAAACTTCCCCTTACCCATTTCAAGCTTCAGCTTAAGAGATGGTATCATTTGGTTTCTAATTTTGTTATAAATTCCATTATTCTTGGCTTGGGTGCAAGTATGATTAATATTTAAACTTCTTTGCCTTTTTCTTTGAAACTTCTTTTCCTTTCAATTTCTTCATTATTTAATTTTCCCTCGTCGCAATTTAAATCTAAGACCGTAAGTTTTCCATTCATGTGTTAAAGGTATATTGATCTCACACATACATATATACATTTTTATATCTTGTATGTTTAAGGCTTTAGATATTCACTTGTTACGTTGAATAACCAATGTTTTAGAACAATTAAGTCCGTTTATTGAATGACTTTTTTTTCCATTCCCCTGTAGGATTGATCTTCTGCAAAAAGTGTGGGGGTTCTGGATATTCTAGACGGCTTTGAACCTTCGAGTGAAACATTTCTCCACGTGCAATGTAATTTTTAACATTGTCGAACATACTCAGTGTAACGATTCAATTTATTAATACCAATGAGACCTAAATGGTTTCTTCTTCATTAGGACGGTGTTCAATTGTTTGTTTCATTTTCTTGTGTAAATTAGTTTTCCTACAAGATGAAAATGGTATGAAAATGAATTAGGGGTATCGGTTCTCTCTGAAATACATATATATTTCAACAAACATATTTAGCATATAGTTTATTG

mRNA sequence

ATGGCTGCACTACCTTCTACGGCGGCTCTTCACGTTCTCCCACATCTCCCGTTGCTAAAACCTGAAGTTCCTCTTCTTTTTTGCTGTTCTTGTTCTTCAGCTGCAACCACTTCCTCCACTGTCTCCACTTCCGCGGCTGCGATTCACCCAATTGACCCTCTTATTCACCCCCTTTTGCTCTTCGACAGTTTCGATGCCCCAATTGACACCCAAACTTTTCTTGCTACTCTCAGTGTCTTGGTTGCCATTTCTCTTTCGCTCTTTCTTGGTCTTAAGGGTGGTCCGGTGCCTTGTGAACGTTGTGCTGGAAATGGCGGCACAAAATGTGTTTTCTGTGACAGTGGTAAGATGCAGCAACAGTCAGGATTAATTGACTGCAAAGTGTGTAAAGGTGCAGGATTGATCTTCTGCAAAAAGTGTGGGGGTTCTGGATATTCTAGACGGCTTTGA

Coding sequence (CDS)

ATGGCTGCACTACCTTCTACGGCGGCTCTTCACGTTCTCCCACATCTCCCGTTGCTAAAACCTGAAGTTCCTCTTCTTTTTTGCTGTTCTTGTTCTTCAGCTGCAACCACTTCCTCCACTGTCTCCACTTCCGCGGCTGCGATTCACCCAATTGACCCTCTTATTCACCCCCTTTTGCTCTTCGACAGTTTCGATGCCCCAATTGACACCCAAACTTTTCTTGCTACTCTCAGTGTCTTGGTTGCCATTTCTCTTTCGCTCTTTCTTGGTCTTAAGGGTGGTCCGGTGCCTTGTGAACGTTGTGCTGGAAATGGCGGCACAAAATGTGTTTTCTGTGACAGTGGTAAGATGCAGCAACAGTCAGGATTAATTGACTGCAAAGTGTGTAAAGGTGCAGGATTGATCTTCTGCAAAAAGTGTGGGGGTTCTGGATATTCTAGACGGCTTTGA

Protein sequence

MAALPSTAALHVLPHLPLLKPEVPLLFCCSCSSAATTSSTVSTSAAAIHPIDPLIHPLLLFDSFDAPIDTQTFLATLSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDSGKMQQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL

Homology

[Close]

BLAST of CsaV3_1G004520 vs. NCBI nr
Match: XP_004137357.1 (PREDICTED: uncharacterized protein LOC101204110 isoform X1 [Cucumis sativus] >KGN63893.1 hypothetical protein Csa_1G025260 [Cucumis sativus])

HSP 1 Score: 212.6 bits (540), Expect = 9.1e-52
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MAALPSTAALHVLPHLPLLKPEVPLLFXXXXXXXXXXXXXXXXXXXXXHPIDPLIHPLLL 60
           MAALPSTAALHVLPHLPLLKPEVPLLFXXXXXXXXXXXXXXXXXXXXXHPIDPLIHPLLL
Sbjct: 1   MAALPSTAALHVLPHLPLLKPEVPLLFXXXXXXXXXXXXXXXXXXXXXHPIDPLIHPLLL 60

Query: 61  FDSFDAPIDTQTFLATLSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDSGKMQQQ 120
           FDSFDAPIDTQTFLATLSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDSGKMQQQ
Sbjct: 61  FDSFDAPIDTQTFLATLSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDSGKMQQQ 120

Query: 121 SGLIDCKVXXXXXXXXXXXXXXXXYSRRL 150
           SGLIDCKVXXXXXXXXXXXXXXXXYSRRL
Sbjct: 121 SGLIDCKVXXXXXXXXXXXXXXXXYSRRL 149

[Close]

BLAST of CsaV3_1G004520 vs. NCBI nr
Match: XP_008453507.1 (PREDICTED: uncharacterized protein LOC103494197 isoform X1 [Cucumis melo])

HSP 1 Score: 194.1 bits (492), Expect = 3.4e-46
Identity = 141/149 (94.63%), Postives = 142/149 (95.30%), Query Frame = 0


Query: 1   MAALPSTAALHVLPHLPLLKPEVPLLFXXXXXXXXXXXXXXXXXXXXXHPIDPLIHPLLL 60
           MAALPSTAALHVLPHLPLLKPEVPLL XXXXXXXXXXXXXXXXXXXXX    PLIHPLLL
Sbjct: 1   MAALPSTAALHVLPHLPLLKPEVPLLXXXXXXXXXXXXXXXXXXXXXXXXXXPLIHPLLL 60

Query: 61  FDSFDAPIDTQTFLATLSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDSGKMQQQ 120
           FDSFDAPIDTQTFLAT SVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCD+GKMQQQ
Sbjct: 61  FDSFDAPIDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKMQQQ 120

Query: 121 SGLIDCKVXXXXXXXXXXXXXXXXYSRRL 150
           SGLIDCK XXXXXXXXXXXXXXXXYSRRL
Sbjct: 121 SGLIDCKXXXXXXXXXXXXXXXXXYSRRL 149

[Close]

BLAST of CsaV3_1G004520 vs. NCBI nr
Match: XP_022933994.1 (uncharacterized protein LOC111441233 [Cucurbita moschata])

HSP 1 Score: 175.3 bits (443), Expect = 1.6e-40
Identity = 126/152 (82.89%), Postives = 135/152 (88.82%), Query Frame = 0


Query: 1   MAALPSTAALHVLPHLPLLKPEVPLLF---XXXXXXXXXXXXXXXXXXXXXHPIDPLIHP 60
           M ALPSTAAL+VLP LPLLK EVPLL+        XXXXXXXXXXXXXXX H I  +IHP
Sbjct: 1   MYALPSTAALNVLPQLPLLKSEVPLLYCCSCASVSXXXXXXXXXXXXXXXIHSISSVIHP 60

Query: 61  LLLFDSFDAPIDTQTFLATLSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDSGKM 120
           +LLF+S+DAP+DTQTFLAT SVLVAISLSLFLGLKGGPVPCERCAGNGGTKC+FCD+GKM
Sbjct: 61  VLLFNSYDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCIFCDNGKM 120

Query: 121 QQQSGLIDCKVXXXXXXXXXXXXXXXXYSRRL 150
           QQQSGLIDCK XXXXXXXXXXXXXXXXYSRRL
Sbjct: 121 QQQSGLIDCKXXXXXXXXXXXXXXXXXYSRRL 152

[Close]

BLAST of CsaV3_1G004520 vs. NCBI nr
Match: XP_023531506.1 (uncharacterized protein LOC111793722 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 174.5 bits (441), Expect = 2.7e-40
Identity = 130/152 (85.53%), Postives = 140/152 (92.11%), Query Frame = 0


Query: 1   MAALPSTAALHVLPHLPLLKPEVPLLF---XXXXXXXXXXXXXXXXXXXXXHPIDPLIHP 60
           M ALPSTAAL+VLP +PLLK EVPLL+   XXXXXXXXXXXXXXXXXXXX H I  +IHP
Sbjct: 1   MYALPSTAALNVLPQIPLLKSEVPLLYCCXXXXXXXXXXXXXXXXXXXXXIHSISSVIHP 60

Query: 61  LLLFDSFDAPIDTQTFLATLSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDSGKM 120
           +LLF+S+DAP+DTQTFLAT SVLVAISLSLFLGLKGGPVPCERCAGNGGTKC+FCD+GKM
Sbjct: 61  VLLFNSYDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCIFCDNGKM 120

Query: 121 QQQSGLIDCKVXXXXXXXXXXXXXXXXYSRRL 150
           QQQSGLIDCK XXXXXXXXXXXXXXXXYSRRL
Sbjct: 121 QQQSGLIDCKXXXXXXXXXXXXXXXXXYSRRL 152

[Close]

BLAST of CsaV3_1G004520 vs. NCBI nr
Match: XP_022973600.1 (uncharacterized protein LOC111472182 [Cucurbita maxima])

HSP 1 Score: 171.8 bits (434), Expect = 1.8e-39
Identity = 128/150 (85.33%), Postives = 137/150 (91.33%), Query Frame = 0


Query: 1   MAALPSTAALH-VLPHLPLLKPEVPLLFXXXXXXXXXXXXXXXXXXXXXHPIDPLIHPLL 60
           M ALPSTAAL+ VLP LPLLK EVPLL+    XXXXXXXXXXXXXXXXXH I  +IHP+L
Sbjct: 1   MYALPSTAALNVVLPQLPLLKSEVPLLY-CCSXXXXXXXXXXXXXXXXXHSISSVIHPVL 60

Query: 61  LFDSFDAPIDTQTFLATLSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDSGKMQQ 120
           LF+S+DAP+DTQTFLAT SVLVAISLSLFLGLKGGPVPCERCAGNGGTKC+FCD+GKMQQ
Sbjct: 61  LFNSYDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCIFCDNGKMQQ 120

Query: 121 QSGLIDCKVXXXXXXXXXXXXXXXXYSRRL 150
           QSGLIDCK XXXXXXXXXXXXXXXXYSRRL
Sbjct: 121 QSGLIDCKXXXXXXXXXXXXXXXXXYSRRL 149

[Close]

BLAST of CsaV3_1G004520 vs. TAIR10
Match: AT3G44020.1 (thylakoid lumenal P17.1 protein)

HSP 1 Score: 112.8 bits (281), Expect = 1.8e-25
Identity = 74/106 (69.81%), Postives = 87/106 (82.08%), Query Frame = 0


Query: 49  HPIDPLIHPLLLF--DSFDAP---IDTQTFLATLSVLVAISLSLFLGLKGGPVPCERCAG 108
           H  + +IHP +LF   +FD     IDTQTF+ T+S++VAI+LSLFLG KG PVPCERC G
Sbjct: 54  HSANLIIHPSVLFLSSAFDGGGGFIDTQTFIVTISLVVAIALSLFLGFKGDPVPCERCGG 113

Query: 109 NGGTKCVFCDSGKMQQQSGLIDCKVXXXXXXXXXXXXXXXXYSRRL 150
           NGGTKCVFC  GKM+ +SG++DCKVXXXXXXXXXXXXXXXXYSRRL
Sbjct: 114 NGGTKCVFCLEGKMKVESGMVDCKVXXXXXXXXXXXXXXXXYSRRL 159

[Close]

BLAST of CsaV3_1G004520 vs. TrEMBL
Match: tr|A0A0A0LQ07|A0A0A0LQ07_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025260 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 6.0e-52
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MAALPSTAALHVLPHLPLLKPEVPLLFXXXXXXXXXXXXXXXXXXXXXHPIDPLIHPLLL 60
           MAALPSTAALHVLPHLPLLKPEVPLLFXXXXXXXXXXXXXXXXXXXXXHPIDPLIHPLLL
Sbjct: 1   MAALPSTAALHVLPHLPLLKPEVPLLFXXXXXXXXXXXXXXXXXXXXXHPIDPLIHPLLL 60

Query: 61  FDSFDAPIDTQTFLATLSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDSGKMQQQ 120
           FDSFDAPIDTQTFLATLSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDSGKMQQQ
Sbjct: 61  FDSFDAPIDTQTFLATLSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDSGKMQQQ 120

Query: 121 SGLIDCKVXXXXXXXXXXXXXXXXYSRRL 150
           SGLIDCKVXXXXXXXXXXXXXXXXYSRRL
Sbjct: 121 SGLIDCKVXXXXXXXXXXXXXXXXYSRRL 149

[Close]

BLAST of CsaV3_1G004520 vs. TrEMBL
Match: tr|A0A1S3BXK6|A0A1S3BXK6_CUCME (uncharacterized protein LOC103494197 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494197 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 2.2e-46
Identity = 141/149 (94.63%), Postives = 142/149 (95.30%), Query Frame = 0


Query: 1   MAALPSTAALHVLPHLPLLKPEVPLLFXXXXXXXXXXXXXXXXXXXXXHPIDPLIHPLLL 60
           MAALPSTAALHVLPHLPLLKPEVPLL XXXXXXXXXXXXXXXXXXXXX    PLIHPLLL
Sbjct: 1   MAALPSTAALHVLPHLPLLKPEVPLLXXXXXXXXXXXXXXXXXXXXXXXXXXPLIHPLLL 60

Query: 61  FDSFDAPIDTQTFLATLSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDSGKMQQQ 120
           FDSFDAPIDTQTFLAT SVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCD+GKMQQQ
Sbjct: 61  FDSFDAPIDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKMQQQ 120

Query: 121 SGLIDCKVXXXXXXXXXXXXXXXXYSRRL 150
           SGLIDCK XXXXXXXXXXXXXXXXYSRRL
Sbjct: 121 SGLIDCKXXXXXXXXXXXXXXXXXYSRRL 149

[Close]

BLAST of CsaV3_1G004520 vs. TrEMBL
Match: tr|A0A1S3BVU9|A0A1S3BVU9_CUCME (uncharacterized protein LOC103494197 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494197 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 3.4e-31
Identity = 99/105 (94.29%), Postives = 99/105 (94.29%), Query Frame = 0


Query: 1   MAALPSTAALHVLPHLPLLKPEVPLLFXXXXXXXXXXXXXXXXXXXXXHPIDPLIHPLLL 60
           MAALPSTAALHVLPHLPLLKPEVPLL XXXXXXXXXXXXXXXXXXXXX    PLIHPLLL
Sbjct: 1   MAALPSTAALHVLPHLPLLKPEVPLLXXXXXXXXXXXXXXXXXXXXXXXXXXPLIHPLLL 60

Query: 61  FDSFDAPIDTQTFLATLSVLVAISLSLFLGLKGGPVPCERCAGNG 106
           FDSFDAPIDTQTFLAT SVLVAISLSLFLGLKGGPVPCERCAGNG
Sbjct: 61  FDSFDAPIDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNG 105

[Close]

BLAST of CsaV3_1G004520 vs. TrEMBL
Match: tr|M5WF60|M5WF60_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G149200 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.3e-30
Identity = 90/144 (62.50%), Postives = 101/144 (70.14%), Query Frame = 0


Query: 6   STAALHVLPHLPLLKPEVPLLFXXXXXXXXXXXXXXXXXXXXXHPIDPLIHPLLLFDSFD 65
           S  A H LP+ P  KPE+PLLF                      P    + P+LLF  FD
Sbjct: 22  SLTANHSLPYQPQTKPEIPLLF-------RCSATSAARPEVIIQPTRLFVQPILLFAGFD 81

Query: 66  APIDTQTFLATLSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDSGKMQQQSGLID 125
            P+DTQTFLAT+SVL AI+LSLFLGLKG PVPCERCAGNGGTKCVFC +GKM+ ++GLID
Sbjct: 82  KPLDTQTFLATISVLAAIALSLFLGLKGDPVPCERCAGNGGTKCVFCSNGKMKMETGLID 141

Query: 126 CKVXXXXXXXXXXXXXXXXYSRRL 150
           CKV  XXXXXXXXXXXXXXYSRRL
Sbjct: 142 CKVCKXXXXXXXXXXXXXXYSRRL 158

[Close]

BLAST of CsaV3_1G004520 vs. TrEMBL
Match: tr|A0A061GTU9|A0A061GTU9_THECC (Thylakoid lumenal P17.1 protein OS=Theobroma cacao OX=3641 GN=TCM_041203 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.9e-29
Identity = 84/143 (58.74%), Postives = 101/143 (70.63%), Query Frame = 0


Query: 7   TAALHVLPHLPLLKPEVPLLFXXXXXXXXXXXXXXXXXXXXXHPIDPLIHPLLLFDSFDA 66
           ++ +H  P L L K E+P LF                      P   L+HP+LLF  FD 
Sbjct: 20  SSTIHFFPQLSLTKQEIPTLF----------RYSSRRRKLFYQPTRLLLHPVLLFSGFDK 79

Query: 67  PIDTQTFLATLSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDSGKMQQQSGLIDC 126
           P+DTQTFLAT+SVL AI+LSL LGLKG PVPC+RCAGNGGTKCVFC++GKM+Q++GL+DC
Sbjct: 80  PLDTQTFLATISVLAAIALSLVLGLKGDPVPCDRCAGNGGTKCVFCENGKMKQETGLVDC 139

Query: 127 KVXXXXXXXXXXXXXXXXYSRRL 150
           +V   XXXXXXXXXXXXXYSRRL
Sbjct: 140 RVCKGXXXXXXXXXXXXXYSRRL 152

The following BLAST results are available for this feature:

BLAST of CsaV3_1G004520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137357.1	9.1e-52	100.00	PREDICTED: uncharacterized protein LOC101204110 isoform X1 [Cucumis sativus] >KG...	[more]
XP_008453507.1	3.4e-46	94.63	PREDICTED: uncharacterized protein LOC103494197 isoform X1 [Cucumis melo]	[more]
XP_022933994.1	1.6e-40	82.89	uncharacterized protein LOC111441233 [Cucurbita moschata]	[more]
XP_023531506.1	2.7e-40	85.53	uncharacterized protein LOC111793722 [Cucurbita pepo subsp. pepo]	[more]
XP_022973600.1	1.8e-39	85.33	uncharacterized protein LOC111472182 [Cucurbita maxima]	[more]

BLAST of CsaV3_1G004520 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G44020.1	1.8e-25	69.81	thylakoid lumenal P17.1 protein	[more]

BLAST of CsaV3_1G004520 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_1G004520 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LQ07\|A0A0A0LQ07_CUCSA	6.0e-52	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025260 PE=4 SV=1	[more]
tr\|A0A1S3BXK6\|A0A1S3BXK6_CUCME	2.2e-46	94.63	uncharacterized protein LOC103494197 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3BVU9\|A0A1S3BVU9_CUCME	3.4e-31	94.29	uncharacterized protein LOC103494197 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|M5WF60\|M5WF60_PRUPE	1.3e-30	62.50	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G149200 PE=4 SV=1	[more]
tr\|A0A061GTU9\|A0A061GTU9_THECC	1.9e-29	58.74	Thylakoid lumenal P17.1 protein OS=Theobroma cacao OX=3641 GN=TCM_041203 PE=4 SV...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0031072	heat shock protein binding
molecular_function	GO:0051082	unfolded protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G004520.1	CsaV3_1G004520.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR15852	FAMILY NOT NAMED	coord: 34..149
None	No IPR available	PANTHER	PTHR15852:SF25	SUBFAMILY NOT NAMED	coord: 34..149

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G004520	CSPI01G04520	Wild cucumber (PI 183967)	cpicucB001
CsaV3_1G004520	Cucsa.111730	Cucumber (Gy14) v1	cgycucB143
CsaV3_1G004520	CmaCh11G003230	Cucurbita maxima (Rimu)	cmacucB0101
CsaV3_1G004520	CmoCh11G003280	Cucurbita moschata (Rifu)	cmocucB0091
CsaV3_1G004520	Cp4.1LG04g13630	Cucurbita pepo (Zucchini)	cpecucB0815
CsaV3_1G004520	CsGy1G004420	Cucumber (Gy14) v2	cgybcucB002
CsaV3_1G004520	Carg09090	Silver-seed gourd	carcucB0629
CsaV3_1G004520	Cla018907	Watermelon (97103) v1	cucwmB106
CsaV3_1G004520	MELO3C017379	Melon (DHL92) v3.5.1	cucmeB055
CsaV3_1G004520	ClCG06G014160	Watermelon (Charleston Gray)	cucwcgB089
CsaV3_1G004520	Lsi06G012650	Bottle gourd (USVL1VR-Ls)	cuclsiB082
CsaV3_1G004520	MELO3C017379.2	Melon (DHL92) v3.6.1	cucmedB051
CsaV3_1G004520	Cla97C06G123620	Watermelon (97103) v2	cucwmbB077
CsaV3_1G004520	Bhi02G000118	Wax gourd	cucwgoB085

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G004520	Silver-seed gourd	carcucB0824
CsaV3_1G004520	Cucurbita maxima (Rimu)	cmacucB0060
CsaV3_1G004520	Cucurbita moschata (Rifu)	cmocucB0046
CsaV3_1G004520	Cucurbita pepo (Zucchini)	cpecucB0444