Cp4.1LG04g13630 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG04g13630
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Thylakoid lumenal P17.1 protein
Location	Cp4.1LG04 : 11068364 .. 11072720 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAAAGTGCAAAATTCAGTTGTGAATGGACGGTTATCCTTTCAGCATAATTAGGAGCTGGCAGACGCCCCTCATCCGCTCGCTGCTGCTTCACCGGGTTCGAGCGCTCCCAGAATCGCTGCTGCCGAGATAGACAACCACCAAACTCTCTCCCCATTTCCCATCGATGTATGCGCTACCTTCTACGGCCGCTCTTAACGTTCTCCCTCAGATTCCATTGCTAAAATCTGAAGTTCCTCTTCTCTATTGCTGTTCTTGTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGTTGCAACCACTTCTTCCGCCGCGGCGATACACTCAATCAGCTCTGTTATCCATCCCGTTTTGCTCTTTAATAGCTACGACGCGCCATTGGACACCCAAACTTTTCTTGCTACTTTCAGCGTTTTGGTCGCCATTTCTCTGTCCCTCTTTCTTGGTCTTAAGGTATCGCTTCTTTGCCCATTTCTCTGACGGTTTGCTTCTGAATTTATTGTTTGGAAGTTGTGAGGATGATTAAATTTTTTGGTTCGGGTTTTGCAGGGTGGTCCTGTGCCTTGTGAGCGATGTGCTGGAAATGGTAACTATAGTTTGCTTCAGAGTTGCGTTTAATTTAGTGCCTTCAGAATTAAATTTTACTTAGCCATGAATTATGAAGTAGCAATATTAAGGGATGAATTTAATACTAGTTCTGGTCGTCTCTTAGGATTGAGTTTATTTATTGAATAAATTGTTTTACAACACATGAGATCCATGCTTTCAAGTGATCGATGAACATTGCATTTTTGGATTGGCAATCCTCAAGCGATCTTGTCATTATAATCATAGTCTTGAACTGATCCATGCTTTCAAGTGATCGATGAACATTGCATTTTTGGATTGGCAATCCTCAAGCGATCTTGTCATTATAATCATAGTCTTGAACACGTTTGAATCGTTCTATACTCTGTTTTCAGTTCATCAAATTTTTTGTTTAGTTGGTTTTAAATGAACCTCGACATAACTTAGTTAGTTGAGGCGTATATCCTCAATCAAAAAGTAAAGGCGGAGGCTCGAATTTTCACCATTCATATGTTGCTAGTTAACCTTATACTATTAAATGGAGAAATGAGAGAAGGAATATTGCTTATCCTTCGCATATAGATAGGTTATGTGAATAGTTCATCTCATAACGTTAATAAGGTTGGATTGCATTCTGAGTATGGCATCTATACGGGAATCCCACATAAGGGCTGAGAAGCCTTCCTCCAAAGGAAACTTCTGGCTGTCCTTATGGTTCATTTTGAGGAGATTAGAGCACATATTTAGTCTCTTTAGAAATGTAGTATCGGTAGCAAACTTGCAGACTGTTATATCCAATGAATTTCCCTCTTTAATTCTTTCGGTAGCTACCGAGTTAACGAATGAAACGATTGGAGTTGTACCTAACATAGTTGTTGCCATTGACCTTTTCATCCCCTGGAAGCTCCAATCGTTTCATTCGTTAACGATCCACTAAATCTAGACTCTATCAAATGTTGCTAATCTGTTGAGGCTCGTTTTCCATAAATGAATGTTTTTGTCTCAAAATATATCTTAAACGACATTGCTAAAAGAGTTGGCAACAATGTCGATGTGCAGGTGGCACGAAATGCATCTTCTGTGACAACGGTAAGATGCAGCAACAGTCGGGATTAATTGACTGCAAAGTGTGCAAGGGTGCAGGTATGTACTCATCTTCTTATACTTTCAAATTACGTCAAGCATTCTTTGATACGGTTTGTTGATCGAAATCTCTACGTCAACTGATAACACGACTGATGACCACTTTTTAACCTGTTTCTAGTTTTTATTACCTAAACATTGGAGAAACTCTTGTATCAACTTGAAATTAAAGTTTAAAGAAGTGTTGTTAGTCTGTTATTAAAAAAAAACTGATCTTGTATGTTCGATTTTAGTTTTCGCTTGTTATCTCGAGTAATCAAAGCTTTTGATTGATCAAGAACTTTTATCTCATTTGAGTTTTCGTTTTCTTCGCAGGGTTGATATTCTGCAAAAAGTGTGGCGGTTCTGGATATTCCAGACGGCTATGAACCATTGAGTGATAAGTTTTCTCCACTTGCAATGTAACTTATGACATTGTGTCTCAACTCACTTAGTAAATAATTCAATTATTCAAGATCATCGAGTCTCAAATAGCTTCTTCTTCATCACATGGATGTCACTTGTTTAATTTTCTAATATAAATTAGCTTTCCTATAAGATGAAAATGGGATAAGTCCTTTTTTCTCAACAATCATATATTGAATAGTTTACTCAAAACAAGGGGATCCATCAATAAGGCATAATCAGCATAATCATCTTCACATGCACATATACAGAAATTGTGGCAACTGTTCAATGAAAACTTAACTGTGATGTAGATTTCCCTCTAGCAATAATTTTGCCTCCATAACTGAAGAGCGAATGCTTCTCATCTCTTCTTCCACTTTTTCGGATAAGAAGCATGAGTTATGCCTGTTATCGTCTAATAACCGGTTTGTCTTTTGGACGGCTACAGATTTTTCTGTTACCAATTCCTCCATCCTTTGATGCTCCATCTGCAGTTCTTCTTCCAAAATTCTTATCTCTGCCTCCTTCAGACCTGCTTCAAATAGGCACTCTTGGTACTCCAACATAATGTTCTCAAATTCTATCATTCCACTATTCCTCATTTCCAACAGTGTCTCCTTTTCACTGATTACCCCTTGAACTCCGGCCTCCATCTCGTCAACGGACCTTGAAGCTTTCTGTACCTCCAACTGAACAGCTTTGATTTCACTATCAGCCTTTCTAGACTTCCTTGTCAAATCTTCAAGTTCCTTTCTTATTGCCCCTAGTTTTTCTTTAGCTAGCTTCATCTCATTTTGCAACTTAGTTTTTTCCTCTGCAGACTTGAGTAAATCTGTGGCTCGACCAGTGAATTGCCAGCTCTTTGGTTGGGGATCTATTTTCTCGACATTATCTATTGCAAAGAGGACCTTGTCATTTTCTTGTTTTTGACTTTCTTCATCTAACTTGGATTTTAAGCTTGCAAGGTTGCTCCTCAGTTCCCCTTCAGATTGTTGAATCTTTACACATTGAGCCTCGATTTCTGCTTTGTGTGCTTGAAGGGAGGTCAGCTCGCTTTTCCTCTGGGCCAAATAAGACTTTGAAGCATCTGCCCTTGCTCTTGCCCTTGTTTCTCGTTGTTCAAAATAAATTACGGAAGAAGAAAAGTTAGTAAGAGAGTATCTCAGAGCGCAAAGCTTACTCTGTGCAAGATCTCTACTTTCTTGCTTTTTGGCTAAGACTAGTTTAAGGGATTCAACCTCCTCCTGCTTTAAGTGAACTTCATCTTCCACAACTTCAACCTGTTTTGAGAGTTTATCGGCCTCAAATATCATCTTTTCAAGTGAACTTAAAACACTGATATTCCTGGTTGAACCTGAAAGCTGTTCTTCTGCTGTTTCAAGCTTCTTTCTAATCATACTTAAATCTTCTGGCAACATTTCTACAATAAGAGCGGGTGGATCAGTTTCCATCTGTGTTTCAGATTGCATCTGTTTTGTATCGTCCACATTAGACGTACCTTTCTCTTCTACTAATTCGTCTGATTCATCCAACCCATTCCCTTCCTTTATATCAGAGTTTGTGTGGGAACATAATTCATCTGCAACAAGACCATCATTTTCTTCTTCAAGAGAATTTCTAAGTCTTGGGATGGACTCATTGCTCTCTCCCCCTCCATCGAGTATTTCCATTTCAGATGGTACAGATTGACAGACCAAATTTTGTGCTTCATTGGGGTTGAAAGGTTCAACGTATGCCTCGTTCTTCCCTTCATCAACTTCAACAAACTTCTCAATGCAATCAGATTCTCCTTTCGTGTCAGCTTTTGTGTTTTCTAAAGAAGAAAGCATCTTCTTGAACTCATCTTTCTCCTGCATGGCCCCTTCATACAAGCTCATTAACTTATCATTTTCCTCGTGCATTTCCACTAGCTGTTGCTGTAGCCGCTCAACCGCTTTCTCATGAGCCTCTTTTTCATCGGAAGTTTCGACCACTTTAGCATCATTCTGTGCAGTTTCAACTTTACTTCCATTTCCAAACTTACTTTCCGAAGCTGCTGTTTCATACAGTTCAATGAGTTTATTGTTATCCTCGATTAGAACTCTTAGCTTCATACGAAGTTCATCATTCTCTTTGGACAAGGCTATTGCCGTTTCATGAGCACTTGCTTCTCTTTGACTAGCAGCAGCAATGGCGTCAACCATTGTCTTTAACTCCATTTGGTCGCTAAAACTGATGGTGGACATGTCATTTGATGCCAAAGGAAGCTCAACTTGATTAGTTC

mRNA sequence

TGAAAGTGCAAAATTCAGTTGTGAATGGACGGTTATCCTTTCAGCATAATTAGGAGCTGGCAGACGCCCCTCATCCGCTCGCTGCTGCTTCACCGGGTTCGAGCGCTCCCAGAATCGCTGCTGCCGAGATAGACAACCACCAAACTCTCTCCCCATTTCCCATCGATGTATGCGCTACCTTCTACGGCCGCTCTTAACGTTCTCCCTCAGATTCCATTGCTAAAATCTGAAGTTCCTCTTCTCTATTGCTGTTCTTGTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGTTGCAACCACTTCTTCCGCCGCGGCGATACACTCAATCAGCTCTGTTATCCATCCCGTTTTGCTCTTTAATAGCTACGACGCGCCATTGGACACCCAAACTTTTCTTGCTACTTTCAGCGTTTTGGTCGCCATTTCTCTGTCCCTCTTTCTTGGTCTTAAGGGTGGTCCTGTGCCTTGTGAGCGATGTGCTGGAAATGGTGGCACGAAATGCATCTTCTGTGACAACGGTAAGATGCAGCAACAGTCGGGATTAATTGACTGCAAAGTGTGCAAGGGTGCAGGGTTGATATTCTGCAAAAAGTGTGGCGGTTCTGGATATTCCAGACGGCTATGAACCATTGAGTGATAAGTTTTCTCCACTTGCAATGTAACTTATGACATTGTGTCTCAACTCACTTAGTAAATAATTCAATTATTCAAGATCATCGAGTCTCAAATAGCTTCTTCTTCATCACATGGATGTCACTTGTTTAATTTTCTAATATAAATTAGCTTTCCTATAAGATGAAAATGGGATAAGTCCTTTTTTCTCAACAATCATATATTGAATAGTTTACTCAAAACAAGGGGATCCATCAATAAGGCATAATCAGCATAATCATCTTCACATGCACATATACAGAAATTGTGGCAACTGTTCAATGAAAACTTAACTGTGATGTAGATTTCCCTCTAGCAATAATTTTGCCTCCATAACTGAAGAGCGAATGCTTCTCATCTCTTCTTCCACTTTTTCGGATAAGAAGCATGAGTTATGCCTGTTATCGTCTAATAACCGGTTTGTCTTTTGGACGGCTACAGATTTTTCTGTTACCAATTCCTCCATCCTTTGATGCTCCATCTGCAGTTCTTCTTCCAAAATTCTTATCTCTGCCTCCTTCAGACCTGCTTCAAATAGGCACTCTTGGTACTCCAACATAATGTTCTCAAATTCTATCATTCCACTATTCCTCATTTCCAACAGTGTCTCCTTTTCACTGATTACCCCTTGAACTCCGGCCTCCATCTCGTCAACGGACCTTGAAGCTTTCTGTACCTCCAACTGAACAGCTTTGATTTCACTATCAGCCTTTCTAGACTTCCTTGTCAAATCTTCAAGTTCCTTTCTTATTGCCCCTAGTTTTTCTTTAGCTAGCTTCATCTCATTTTGCAACTTAGTTTTTTCCTCTGCAGACTTGAGTAAATCTGTGGCTCGACCAGTGAATTGCCAGCTCTTTGGTTGGGGATCTATTTTCTCGACATTATCTATTGCAAAGAGGACCTTGTCATTTTCTTGTTTTTGACTTTCTTCATCTAACTTGGATTTTAAGCTTGCAAGGTTGCTCCTCAGTTCCCCTTCAGATTGTTGAATCTTTACACATTGAGCCTCGATTTCTGCTTTGTGTGCTTGAAGGGAGGTCAGCTCGCTTTTCCTCTGGGCCAAATAAGACTTTGAAGCATCTGCCCTTGCTCTTGCCCTTGTTTCTCGTTGTTCAAAATAAATTACGGAAGAAGAAAAGTTAGTAAGAGAGTATCTCAGAGCGCAAAGCTTACTCTGTGCAAGATCTCTACTTTCTTGCTTTTTGGCTAAGACTAGTTTAAGGGATTCAACCTCCTCCTGCTTTAAGTGAACTTCATCTTCCACAACTTCAACCTGTTTTGAGAGTTTATCGGCCTCAAATATCATCTTTTCAAGTGAACTTAAAACACTGATATTCCTGGTTGAACCTGAAAGCTGTTCTTCTGCTGTTTCAAGCTTCTTTCTAATCATACTTAAATCTTCTGGCAACATTTCTACAATAAGAGCGGGTGGATCAGTTTCCATCTGTGTTTCAGATTGCATCTGTTTTGTATCGTCCACATTAGACGTACCTTTCTCTTCTACTAATTCGTCTGATTCATCCAACCCATTCCCTTCCTTTATATCAGAGTTTGTGTGGGAACATAATTCATCTGCAACAAGACCATCATTTTCTTCTTCAAGAGAATTTCTAAGTCTTGGGATGGACTCATTGCTCTCTCCCCCTCCATCGAGTATTTCCATTTCAGATGGTACAGATTGACAGACCAAATTTTGTGCTTCATTGGGGTTGAAAGGTTCAACGTATGCCTCGTTCTTCCCTTCATCAACTTCAACAAACTTCTCAATGCAATCAGATTCTCCTTTCGTGTCAGCTTTTGTGTTTTCTAAAGAAGAAAGCATCTTCTTGAACTCATCTTTCTCCTGCATGGCCCCTTCATACAAGCTCATTAACTTATCATTTTCCTCGTGCATTTCCACTAGCTGTTGCTGTAGCCGCTCAACCGCTTTCTCATGAGCCTCTTTTTCATCGGAAGTTTCGACCACTTTAGCATCATTCTGTGCAGTTTCAACTTTACTTCCATTTCCAAACTTACTTTCCGAAGCTGCTGTTTCATACAGTTCAATGAGTTTATTGTTATCCTCGATTAGAACTCTTAGCTTCATACGAAGTTCATCATTCTCTTTGGACAAGGCTATTGCCGTTTCATGAGCACTTGCTTCTCTTTGACTAGCAGCAGCAATGGCGTCAACCATTGTCTTTAACTCCATTTGGTCGCTAAAACTGATGGTGGACATGTCATTTGATGCCAAAGGAAGCTCAACTTGATTAGTTC

Coding sequence (CDS)

ATGTATGCGCTACCTTCTACGGCCGCTCTTAACGTTCTCCCTCAGATTCCATTGCTAAAATCTGAAGTTCCTCTTCTCTATTGCTGTTCTTGTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGTTGCAACCACTTCTTCCGCCGCGGCGATACACTCAATCAGCTCTGTTATCCATCCCGTTTTGCTCTTTAATAGCTACGACGCGCCATTGGACACCCAAACTTTTCTTGCTACTTTCAGCGTTTTGGTCGCCATTTCTCTGTCCCTCTTTCTTGGTCTTAAGGGTGGTCCTGTGCCTTGTGAGCGATGTGCTGGAAATGGTGGCACGAAATGCATCTTCTGTGACAACGGTAAGATGCAGCAACAGTCGGGATTAATTGACTGCAAAGTGTGCAAGGGTGCAGGGTTGATATTCTGCAAAAAGTGTGGCGGTTCTGGATATTCCAGACGGCTATGA

Protein sequence

MYALPSTAALNVLPQIPLLKSEVPLLYCCSCASASASASASVATTSSAAAIHSISSVIHPVLLFNSYDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCIFCDNGKMQQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL

Homology

[Close]

BLAST of Cp4.1LG04g13630 vs. TrEMBL
Match: A0A0A0LQ07_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025260 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.2e-62
Identity = 126/152 (82.89%), Postives = 141/152 (92.76%), Query Frame = 1


Query: 1   MYALPSTAALNVLPQIPLLKSEVPLLYCCSCASASASASASVATTSSAAAIHSISSVIHP 60
           M ALPSTAAL+VLP +PLLK EVPLL+CCSC+SA A+ S++V+T  SAAAIH I  +IHP
Sbjct: 1   MAALPSTAALHVLPHLPLLKPEVPLLFCCSCSSA-ATTSSTVST--SAAAIHPIDPLIHP 60

Query: 61  VLLFNSYDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCIFCDNGKM 120
           +LLF+S+DAP+DTQTFLAT SVLVAISLSLFLGLKGGPVPCERCAGNGGTKC+FCD+GKM
Sbjct: 61  LLLFDSFDAPIDTQTFLATLSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDSGKM 120

Query: 121 QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 153
           QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL
Sbjct: 121 QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 149

[Close]

BLAST of Cp4.1LG04g13630 vs. TrEMBL
Match: D7T1M2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0009g00970 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 5.3e-42
Identity = 86/131 (65.65%), Postives = 104/131 (79.39%), Query Frame = 1


Query: 22  EVPLLYCCSCASASASASASVATTSSAAAIHSISSVIHPVLLFNSYDAPLDTQTFLATFS 81
           ++PLLY  SCAS+S+              +   + ++HP+ LF S+D PLDTQTFL T S
Sbjct: 39  QLPLLYS-SCASSSS--------------VQPTNLLLHPIFLFTSFDRPLDTQTFLVTIS 98

Query: 82  VLVAISLSLFLGLKGGPVPCERCAGNGGTKCIFCDNGKMQQQSGLIDCKVCKGAGLIFCK 141
           VL AI+LSLFLGLKG PVPCERCAGNGGTKC+FCDNGKM+Q++GL+DCKVCKGAGLIFCK
Sbjct: 99  VLAAIALSLFLGLKGDPVPCERCAGNGGTKCVFCDNGKMKQETGLVDCKVCKGAGLIFCK 154

Query: 142 KCGGSGYSRRL 153
           +CGGSGYS+RL
Sbjct: 159 RCGGSGYSKRL 154

[Close]

BLAST of Cp4.1LG04g13630 vs. TrEMBL
Match: M5WF60_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023756mg PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 5.8e-41
Identity = 90/147 (61.22%), Postives = 103/147 (70.07%), Query Frame = 1


Query: 6   STAALNVLPQIPLLKSEVPLLYCCSCASASASASASVATTSSAAAIHSISSVIHPVLLFN 65
           S  A + LP  P  K E+PLL+ CS  SA+               I      + P+LLF 
Sbjct: 22  SLTANHSLPYQPQTKPEIPLLFRCSATSAARPE----------VIIQPTRLFVQPILLFA 81

Query: 66  SYDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCIFCDNGKMQQQSG 125
            +D PLDTQTFLAT SVL AI+LSLFLGLKG PVPCERCAGNGGTKC+FC NGKM+ ++G
Sbjct: 82  GFDKPLDTQTFLATISVLAAIALSLFLGLKGDPVPCERCAGNGGTKCVFCSNGKMKMETG 141

Query: 126 LIDCKVCKGAGLIFCKKCGGSGYSRRL 153
           LIDCKVCKGAGL+ CKKC GSGYSRRL
Sbjct: 142 LIDCKVCKGAGLVLCKKCAGSGYSRRL 158

[Close]

BLAST of Cp4.1LG04g13630 vs. TrEMBL
Match: A0A061GTU9_THECC (Thylakoid lumenal P17.1 protein OS=Theobroma cacao GN=TCM_041203 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.5e-39
Identity = 84/146 (57.53%), Postives = 105/146 (71.92%), Query Frame = 1


Query: 7   TAALNVLPQIPLLKSEVPLLYCCSCASASASASASVATTSSAAAIHSISSVIHPVLLFNS 66
           ++ ++  PQ+ L K E+P L+  S          +               ++HPVLLF+ 
Sbjct: 20  SSTIHFFPQLSLTKQEIPTLFRYSSRRRKLFYQPT-------------RLLLHPVLLFSG 79

Query: 67  YDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCIFCDNGKMQQQSGL 126
           +D PLDTQTFLAT SVL AI+LSL LGLKG PVPC+RCAGNGGTKC+FC+NGKM+Q++GL
Sbjct: 80  FDKPLDTQTFLATISVLAAIALSLVLGLKGDPVPCDRCAGNGGTKCVFCENGKMKQETGL 139

Query: 127 IDCKVCKGAGLIFCKKCGGSGYSRRL 153
           +DC+VCKGAGLI CKKCGGSGYSRRL
Sbjct: 140 VDCRVCKGAGLILCKKCGGSGYSRRL 152

[Close]

BLAST of Cp4.1LG04g13630 vs. TrEMBL
Match: A0A0B0PGQ8_GOSAR (Chaperone DnaJ OS=Gossypium arboreum GN=F383_00759 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 9.3e-39
Identity = 84/147 (57.14%), Postives = 105/147 (71.43%), Query Frame = 1


Query: 6   STAALNVLPQIPLLKSEVPLLYCCSCASASASASASVATTSSAAAIHSISSVIHPVLLFN 65
           S++  + LPQ+ L K ++  L            S +  +       H    ++HPVLL  
Sbjct: 21  SSSTNHFLPQLSLTKQDISTL------------SRTNNSKRRKLLYHPTRLILHPVLLLT 80

Query: 66  SYDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCIFCDNGKMQQQSG 125
            +D PLDTQTFLAT SVL AI+LSLFLGLKG PVPC+RCAGNGGTKC+FC++GKM+Q++G
Sbjct: 81  GFDKPLDTQTFLATISVLAAIALSLFLGLKGDPVPCDRCAGNGGTKCVFCEDGKMKQETG 140

Query: 126 LIDCKVCKGAGLIFCKKCGGSGYSRRL 153
           LIDC+VCKGAGLI CKKCGGSGYS+RL
Sbjct: 141 LIDCRVCKGAGLILCKKCGGSGYSKRL 155

[Close]

BLAST of Cp4.1LG04g13630 vs. TAIR10
Match: AT3G44020.1 (AT3G44020.1 thylakoid lumenal P17.1 protein)

HSP 1 Score: 153.7 bits (387), Expect = 9.2e-38
Identity = 71/106 (66.98%), Postives = 88/106 (83.02%), Query Frame = 1


Query: 52  HSISSVIHPVLLF--NSYDAP---LDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAG 111
           HS + +IHP +LF  +++D     +DTQTF+ T S++VAI+LSLFLG KG PVPCERC G
Sbjct: 54  HSANLIIHPSVLFLSSAFDGGGGFIDTQTFIVTISLVVAIALSLFLGFKGDPVPCERCGG 113

Query: 112 NGGTKCIFCDNGKMQQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 153
           NGGTKC+FC  GKM+ +SG++DCKVCKG+GLIFCKKCGGSGYSRRL
Sbjct: 114 NGGTKCVFCLEGKMKVESGMVDCKVCKGSGLIFCKKCGGSGYSRRL 159

[Close]

BLAST of Cp4.1LG04g13630 vs. NCBI nr
Match: gi|659107063|ref|XP_008453507.1| (PREDICTED: uncharacterized protein LOC103494197 isoform X1 [Cucumis melo])

HSP 1 Score: 253.4 bits (646), Expect = 2.4e-64
Identity = 129/152 (84.87%), Postives = 143/152 (94.08%), Query Frame = 1


Query: 1   MYALPSTAALNVLPQIPLLKSEVPLLYCCSCASASASASASVATTSSAAAIHSISSVIHP 60
           M ALPSTAAL+VLP +PLLK EVPLLYCCSC+SA A+ S++V+T  SAAAIH I+ +IHP
Sbjct: 1   MAALPSTAALHVLPHLPLLKPEVPLLYCCSCSSA-ATTSSTVST--SAAAIHPINPLIHP 60

Query: 61  VLLFNSYDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCIFCDNGKM 120
           +LLF+S+DAP+DTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKC+FCDNGKM
Sbjct: 61  LLLFDSFDAPIDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKM 120

Query: 121 QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 153
           QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL
Sbjct: 121 QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 149

[Close]

BLAST of Cp4.1LG04g13630 vs. NCBI nr
Match: gi|449439164|ref|XP_004137357.1| (PREDICTED: uncharacterized protein LOC101204110 isoform X1 [Cucumis sativus])

HSP 1 Score: 247.3 bits (630), Expect = 1.7e-62
Identity = 126/152 (82.89%), Postives = 141/152 (92.76%), Query Frame = 1


Query: 1   MYALPSTAALNVLPQIPLLKSEVPLLYCCSCASASASASASVATTSSAAAIHSISSVIHP 60
           M ALPSTAAL+VLP +PLLK EVPLL+CCSC+SA A+ S++V+T  SAAAIH I  +IHP
Sbjct: 1   MAALPSTAALHVLPHLPLLKPEVPLLFCCSCSSA-ATTSSTVST--SAAAIHPIDPLIHP 60

Query: 61  VLLFNSYDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCIFCDNGKM 120
           +LLF+S+DAP+DTQTFLAT SVLVAISLSLFLGLKGGPVPCERCAGNGGTKC+FCD+GKM
Sbjct: 61  LLLFDSFDAPIDTQTFLATLSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDSGKM 120

Query: 121 QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 153
           QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL
Sbjct: 121 QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 149

[Close]

BLAST of Cp4.1LG04g13630 vs. NCBI nr
Match: gi|225436093|ref|XP_002277657.1| (PREDICTED: protein disulfide-isomerase LQY1 [Vitis vinifera])

HSP 1 Score: 178.7 bits (452), Expect = 7.6e-42
Identity = 86/131 (65.65%), Postives = 104/131 (79.39%), Query Frame = 1


Query: 22  EVPLLYCCSCASASASASASVATTSSAAAIHSISSVIHPVLLFNSYDAPLDTQTFLATFS 81
           ++PLLY  SCAS+S+              +   + ++HP+ LF S+D PLDTQTFL T S
Sbjct: 39  QLPLLYS-SCASSSS--------------VQPTNLLLHPIFLFTSFDRPLDTQTFLVTIS 98

Query: 82  VLVAISLSLFLGLKGGPVPCERCAGNGGTKCIFCDNGKMQQQSGLIDCKVCKGAGLIFCK 141
           VL AI+LSLFLGLKG PVPCERCAGNGGTKC+FCDNGKM+Q++GL+DCKVCKGAGLIFCK
Sbjct: 99  VLAAIALSLFLGLKGDPVPCERCAGNGGTKCVFCDNGKMKQETGLVDCKVCKGAGLIFCK 154

Query: 142 KCGGSGYSRRL 153
           +CGGSGYS+RL
Sbjct: 159 RCGGSGYSKRL 154

[Close]

BLAST of Cp4.1LG04g13630 vs. NCBI nr
Match: gi|659107067|ref|XP_008453508.1| (PREDICTED: uncharacterized protein LOC103494197 isoform X2 [Cucumis melo])

HSP 1 Score: 177.2 bits (448), Expect = 2.2e-41
Identity = 102/152 (67.11%), Postives = 115/152 (75.66%), Query Frame = 1


Query: 1   MYALPSTAALNVLPQIPLLKSEVPLLYCCSCASASASASASVATTSSAAAIHSISSVIHP 60
           M ALPSTAAL+VLP +PLLK EVPLLYCCSC+SA A+ S++V+T  SAAAIH I+ +IHP
Sbjct: 1   MAALPSTAALHVLPHLPLLKPEVPLLYCCSCSSA-ATTSSTVST--SAAAIHPINPLIHP 60

Query: 61  VLLFNSYDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCIFCDNGKM 120
           +LLF+S+DAP+DTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGN             
Sbjct: 61  LLLFDSFDAPIDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGN------------- 120

Query: 121 QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 153
                          GLIFCKKCGGSGYSRRL
Sbjct: 121 ---------------GLIFCKKCGGSGYSRRL 121

[Close]

BLAST of Cp4.1LG04g13630 vs. NCBI nr
Match: gi|595833597|ref|XP_007206699.1| (hypothetical protein PRUPE_ppa023756mg [Prunus persica])

HSP 1 Score: 175.3 bits (443), Expect = 8.4e-41
Identity = 90/147 (61.22%), Postives = 103/147 (70.07%), Query Frame = 1


Query: 6   STAALNVLPQIPLLKSEVPLLYCCSCASASASASASVATTSSAAAIHSISSVIHPVLLFN 65
           S  A + LP  P  K E+PLL+ CS  SA+               I      + P+LLF 
Sbjct: 22  SLTANHSLPYQPQTKPEIPLLFRCSATSAARPE----------VIIQPTRLFVQPILLFA 81

Query: 66  SYDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCIFCDNGKMQQQSG 125
            +D PLDTQTFLAT SVL AI+LSLFLGLKG PVPCERCAGNGGTKC+FC NGKM+ ++G
Sbjct: 82  GFDKPLDTQTFLATISVLAAIALSLFLGLKGDPVPCERCAGNGGTKCVFCSNGKMKMETG 141

Query: 126 LIDCKVCKGAGLIFCKKCGGSGYSRRL 153
           LIDCKVCKGAGL+ CKKC GSGYSRRL
Sbjct: 142 LIDCKVCKGAGLVLCKKCAGSGYSRRL 158

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g13630 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG04g13630 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQ07_CUCSA	1.2e-62	82.89	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025260 PE=4 SV=1	[more]
D7T1M2_VITVI	5.3e-42	65.65	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0009g00970 PE=4 SV=...	[more]
M5WF60_PRUPE	5.8e-41	61.22	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023756mg PE=4 SV=1	[more]
A0A061GTU9_THECC	2.5e-39	57.53	Thylakoid lumenal P17.1 protein OS=Theobroma cacao GN=TCM_041203 PE=4 SV=1	[more]
A0A0B0PGQ8_GOSAR	9.3e-39	57.14	Chaperone DnaJ OS=Gossypium arboreum GN=F383_00759 PE=4 SV=1	[more]

BLAST of Cp4.1LG04g13630 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G44020.1	9.2e-38	66.98	thylakoid lumenal P17.1 protein	[more]

BLAST of Cp4.1LG04g13630 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659107063\|ref\|XP_008453507.1\|	2.4e-64	84.87	PREDICTED: uncharacterized protein LOC103494197 isoform X1 [Cucumis melo]	[more]
gi\|449439164\|ref\|XP_004137357.1\|	1.7e-62	82.89	PREDICTED: uncharacterized protein LOC101204110 isoform X1 [Cucumis sativus]	[more]
gi\|225436093\|ref\|XP_002277657.1\|	7.6e-42	65.65	PREDICTED: protein disulfide-isomerase LQY1 [Vitis vinifera]	[more]
gi\|659107067\|ref\|XP_008453508.1\|	2.2e-41	67.11	PREDICTED: uncharacterized protein LOC103494197 isoform X2 [Cucumis melo]	[more]
gi\|595833597\|ref\|XP_007206699.1\|	8.4e-41	61.22	hypothetical protein PRUPE_ppa023756mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0031072	heat shock protein binding
molecular_function	GO:0051082	unfolded protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g13630.1	Cp4.1LG04g13630.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR15852	FAMILY NOT NAMED	coord: 7..152 score: 1.2
None	No IPR available	PANTHER	PTHR15852:SF25	SUBFAMILY NOT NAMED	coord: 7..152 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG04g13630	Cucsa.111730	Cucumber (Gy14) v1	cgycpeB0264
Cp4.1LG04g13630	CmaCh11G003230	Cucurbita maxima (Rimu)	cmacpeB153
Cp4.1LG04g13630	CmoCh11G003280	Cucurbita moschata (Rifu)	cmocpeB129
Cp4.1LG04g13630	Cla018907	Watermelon (97103) v1	cpewmB679
Cp4.1LG04g13630	Csa1G025260	Cucumber (Chinese Long) v2	cpecuB654
Cp4.1LG04g13630	MELO3C017379	Melon (DHL92) v3.5.1	cpemeB615
Cp4.1LG04g13630	ClCG06G014160	Watermelon (Charleston Gray)	cpewcgB616
Cp4.1LG04g13630	CSPI01G04520	Wild cucumber (PI 183967)	cpecpiB657
Cp4.1LG04g13630	Lsi06G012650	Bottle gourd (USVL1VR-Ls)	cpelsiB556
Cp4.1LG04g13630	MELO3C017379.2	Melon (DHL92) v3.6.1	cpemedB727
Cp4.1LG04g13630	CsaV3_1G004520	Cucumber (Chinese Long) v3	cpecucB0815
Cp4.1LG04g13630	Bhi02G000118	Wax gourd	cpewgoB0897
Cp4.1LG04g13630	CsGy1G004420	Cucumber (Gy14) v2	cgybcpeB127
Cp4.1LG04g13630	Carg09090	Silver-seed gourd	carcpeB0847

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG04g13630	Silver-seed gourd	carcpeB1106
Cp4.1LG04g13630	Cucurbita pepo (Zucchini)	cpecpeB360
Cp4.1LG04g13630	Cucurbita maxima (Rimu)	cmacpeB092
Cp4.1LG04g13630	Cucurbita moschata (Rifu)	cmocpeB068