CsaV3_1G004250 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G004250
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionPentatricopeptide repeat-containing protein
Locationchr1 : 2658306 .. 2662733 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAGCGCGCGGGAACTGCCGTTTCAGCCTGTTTATTGGCAGCTCTTCACGATCGATTCAAACTGAATCCATCACCAATAAGCTTCGAGCTTCTTCAACTTCTTCTCCGTCGAAGAAAACATGGACCCAAAAACTCGAATCCAAAAACTCTGACTCCACAATTGTGGATTCCGATATAGTCAAATGGAACAGGAAAATCAGCGCCTACATGCGCAAAGGCCAATGCGAGTCCGCTCTAAGTGTTTTCAATGGTATGCGTCGTCGGAGTACTGTCACCTACAACGCTATGATATCTGGGTATTTGAGTAACAATAAATTTGATTGTGCACGGAAGGTGTTTGAGAAAATGCCCGATAGAGATTTGATATCTTGGAATGTTATGCTTAGTGGTTATGTGAAGAATGGTAATCTTAGTGCGGCTCGGGCTTTGTTTAATCAGATGCCTGAGAAGGATGTTGTTTCTTGGAATGCTATGTTATCTGGGTTTGCTCAGAATGGGTTTGTGGAGGAGGCTAGGAAGATATTTGATCAAATGTTGGTTAAGAATGAAATTTCGTGGAATGGGTTACTGTCCGCGTATGTTCAGAATGGGAGGATTGAGGATGCTAGAAGATTGTTTGATTCGAAAATGGATTGGGAGATCGTTTCTTGGAATTGTTTGATGGGTGGGTATGTAAGGAAAAAGAGGCTAGATGATGCAAGGAGTCTTTTTGACCGTATGCCAGTTAGAGATAAAATCTCTTGGAATATAATGATTACAGGTTATGCTCAGAATGGGCTGCTTTCAGAAGCTCGGAGATTGTTTGAAGAGTTACCAATTCGAGATGTGTTTGCTTGGACGGCCATGGTTTCTGGTTTTGTGCAGAATGGGATGTTGGATGAAGCAACGAGAATTTTTGAAGAAATGCCTGAGAAGAATGAAGTTTCGTGGAATGCAATGATTGCAGGTTATGTGCAGAGCCAGCAAATAGAAAAGGCAAGGGAATTATTTGATCAAATGCCTTCCCGGAATACCAGTTCTTGGAATACAATGGTAACTGGGTATGCTCAGTGTGGCAATATTGATCAAGCCAAGATTTTGTTTGATGAGATGCCTCAACGTGATTGTATATCATGGGCGGCAATGATTTCTGGCTATGCCCAAAGCGGCCAGAGTGAAGAGGCTTTGCACCTTTTTATTAAGATGAAAAGAGATGGGGGAATTTTGAATAGATCTGCGTTAGCATGTGCTTTGAGCTCGTGTGCAGAGATTGCTGCTTTGGAGTTAGGGAAGCAACTACATGGACGACTGGTTAAGGCAGGATTCCAAACTGGGTATATTGCTGGAAATGCACTTCTAGCCATGTATGGCAAATGCGGAAGTATAGAAGAGGCATTTGATGTATTTGAAGATATAACAGAGAAGGATATTGTCTCCTGGAACACAATGATTGCAGGTTATGCAAGGCATGGGTTTGGTAAAGAGGCTTTAGCTCTTTTCGAGTCAATGAAGATGACAATCAAACCTGATGATGTCACTCTGGTATGGAAGTTCTCTATTGACTTTTTTTTTTTCTTTCTAATTTGATCTCCATGTTGTAACTTTTAACAGATAGAGTTGCACTTACATCAAATTACTAATTTATTTCTGGATAGCAGGAGGGAAAGCTAGGATAGAAAAGAAAGAAAATAATAGACATTAATGTAGCAATTTAATTAGTAATCTTATGAAGGTTCCTAGAAGATGATGAAACTTAATTTTAAAAGCTAAGGGAGGAAACTAAGTCTTTTAGTCTGCGTGAATCAACCTGTTAAGCATGTCTTTCACAAATTTGTTTTTGCAGCTACTTGATTTCCATAGCTTGTTGATTCTCTACCATAGCTACGATCTTACATAATTCTTGACCTTGGCTGAATAAAATACTAAAACTGCATCAAATGAATTGTACTCTCAATATTTTAGCTAAAAAGATCTTAGGAAATGCATGATATTCTTTTTCTTCTCATCTTTTTACATCTAACTTTCTGGTTTTTATCTCATTTCTACCTATTTTGTCGAACATCCTAGGTCGGTGTTCTATCTGCTTGCAGCCATACTGGCTTGGTAGATAAAGGCATGGAATATTTTAACTCAATGTATCAGAACTACGGCATAACAGCAAATGCCAAACATTACACTTGCATGATCGATCTACTTGGTCGTGCGGGTCGGCTAGATGAGGCTCTGAATTTAATGAAGAGCATGCCATTTTACCCAGACGCAGCAACTTGGGGTGCTTTACTCGGAGCCAGCCGAATTCATGGTGACACAGAATTAGGTGAGAAGGCTGCTGAGAAGGTATTTGAGATGGAGCCTGATAATTCAGGGATGTACGTTCTTCTCTCAAATCTATACGCAGCTTCAGGGAGATGGAGGGAAGTTCGTGAGATGAGATCGAAAATGAGAGACAAAGGAGTGAAAAAAGTTCCTGGATATAGTTGGGTTGAAATACAAAACAAGACTCACATCTTCACTGTTGGAGATTGTTCACATCCAGAAGCAGAAAGGATATATGCTTATTTAGAAGAGTTGGATTTAGAATTGAAGAAGGATGGGTTTGTTTCTTCTACTAAATTGGTGTTACATGACGTGGAAGAGGAGGAGAAGGAACACATGCTCAAGTATCATAGTGAAAAATTAGCGGTTGCATTTGGGATTTTATCTATACCACCTGGGAGACCAATCCGAGTAATTAAAAACTTGAGGGTATGTGAAGACTGTCACAATGCCATCAAACACATATCCAAAATTACGCAAAGACAAATAATCGTGAGGGATTCTAATCGCTTTCACCACTTCAGCGAAGGTTCATGTTCTTGTGGAGATTATTGGTGATATTTCTTATCGTCATCTTCCTTTGGCGGATATGAACATTCAATTAAGATGATTAGAAATTGATGAATTGGAAAATCATTAAACCGTAAGCCGCTATCCAGAAGAGGCTTCATAGGTGAGGTGAACTTGGATCAAGATTTTTTTTTTTTTTGAGTCCTTCGGATGGAACGTTCAATCTCTGAATGTTAGAGTCACAAAAAAGTTTTGATCCTTGGAACCTTTTCAGAAATATGAGAATTTCAAAGAACTAAATATTTGGAGGTAAACAAAAATCGAGATGAAGGTTTGGTAATAGTACTTTGACAAGGACAACTGTAGTAATGGTGTCAAATCCTGAAGCTGCTGCTCTTGGAGGATACCACTACTGCTAGATTATGCAACTGCTACATTGGTGATTCGGAAGACGCAGGCATATTGTTCATATTTGAGAATGTGATTGTGTTCTTTGTAAGTATATAACTTGGGTGCCTTACACCTAGACTTGCTGCAGCAGCACAACAATTTGACGAACTTGACGAACCAACATTTTATGGGAAGTAATGAAAATTTTCAGAAATTAAACTGGAGAACTGCTCTAAACCTCCTATGAGCTTGAAACTTTTGTATGCCTCATCAGATTAGCAAGAAGTTTTGAATAGGGGTTATGGTTGATCTCATTTCTATTTCCTACAATTCTTTGGATGAGTGGAAAGGGAATTGCCGCTTTGAGAAGTGCATGGATGTTTGGAATTAGCGATGCTAAACTCAGTCTGTGTTTTGGAACCATCTTTGGTGTCCCAAGTTTCCTGTAAGTTAATTGGATGTTTATCAAGCATTTTCAAGCTTAATCTTGGGTTATGAGGTATGATCCATTGCTGATCTTGTTGAACTGCATTATTTATTGATCTTTCATTTGCAGAACCATGGGAGGCTGAAGCTGGCCCAATAGGATTCAGTATGAACGAACGACATTAAAGCTGAATATTTTTGGTGAAGTCTCAATAATTGTTTGTTACTAGTCCTTCATTCACTCGACAGGAAATTGAGGTAATGTTCCCCCAAGGAACTACCCCGGCCCCACCTTTTTCTATTAGTTTTCCCTTAGGTCCTCAATATCCTTCCTGTCTAGCTGACTTAAAGAGCTGCCAT

mRNA sequence

ATGCAAGCGCGCGGGAACTGCCGTTTCAGCCTGTTTATTGGCAGCTCTTCACGATCGATTCAAACTGAATCCATCACCAATAAGCTTCGAGCTTCTTCAACTTCTTCTCCGTCGAAGAAAACATGGACCCAAAAACTCGAATCCAAAAACTCTGACTCCACAATTGTGGATTCCGATATAGTCAAATGGAACAGGAAAATCAGCGCCTACATGCGCAAAGGCCAATGCGAGTCCGCTCTAAGTGTTTTCAATGGTATGCGTCGTCGGAGTACTGTCACCTACAACGCTATGATATCTGGGTATTTGAGTAACAATAAATTTGATTGTGCACGGAAGGTGTTTGAGAAAATGCCCGATAGAGATTTGATATCTTGGAATGTTATGCTTAGTGGTTATGTGAAGAATGGTAATCTTAGTGCGGCTCGGGCTTTGTTTAATCAGATGCCTGAGAAGGATGTTGTTTCTTGGAATGCTATGTTATCTGGGTTTGCTCAGAATGGGTTTGTGGAGGAGGCTAGGAAGATATTTGATCAAATGTTGGTTAAGAATGAAATTTCGTGGAATGGGTTACTGTCCGCGTATGTTCAGAATGGGAGGATTGAGGATGCTAGAAGATTGTTTGATTCGAAAATGGATTGGGAGATCGTTTCTTGGAATTGTTTGATGGGTGGGTATGTAAGGAAAAAGAGGCTAGATGATGCAAGGAGTCTTTTTGACCGTATGCCAGTTAGAGATAAAATCTCTTGGAATATAATGATTACAGGTTATGCTCAGAATGGGCTGCTTTCAGAAGCTCGGAGATTGTTTGAAGAGTTACCAATTCGAGATGTGTTTGCTTGGACGGCCATGGTTTCTGGTTTTGTGCAGAATGGGATGTTGGATGAAGCAACGAGAATTTTTGAAGAAATGCCTGAGAAGAATGAAGTTTCGTGGAATGCAATGATTGCAGGTTATGTGCAGAGCCAGCAAATAGAAAAGGCAAGGGAATTATTTGATCAAATGCCTTCCCGGAATACCAGTTCTTGGAATACAATGGTAACTGGGTATGCTCAGTGTGGCAATATTGATCAAGCCAAGATTTTGTTTGATGAGATGCCTCAACGTGATTGTATATCATGGGCGGCAATGATTTCTGGCTATGCCCAAAGCGGCCAGAGTGAAGAGGCTTTGCACCTTTTTATTAAGATGAAAAGAGATGGGGGAATTTTGAATAGATCTGCGTTAGCATGTGCTTTGAGCTCGTGTGCAGAGATTGCTGCTTTGGAGTTAGGGAAGCAACTACATGGACGACTGGTTAAGGCAGGATTCCAAACTGGGTATATTGCTGGAAATGCACTTCTAGCCATGTATGGCAAATGCGGAAGTATAGAAGAGGCATTTGATGTATTTGAAGATATAACAGAGAAGGATATTGTCTCCTGGAACACAATGATTGCAGGTTATGCAAGGCATGGGTTTGGTAAAGAGGCTTTAGCTCTTTTCGAGTCAATGAAGATGACAATCAAACCTGATGATGTCACTCTGGTCGGTGTTCTATCTGCTTGCAGCCATACTGGCTTGGTAGATAAAGGCATGGAATATTTTAACTCAATGTATCAGAACTACGGCATAACAGCAAATGCCAAACATTACACTTGCATGATCGATCTACTTGGTCGTGCGGGTCGGCTAGATGAGGCTCTGAATTTAATGAAGAGCATGCCATTTTACCCAGACGCAGCAACTTGGGGTGCTTTACTCGGAGCCAGCCGAATTCATGGTGACACAGAATTAGGTGAGAAGGCTGCTGAGAAGGTATTTGAGATGGAGCCTGATAATTCAGGGATGTACGTTCTTCTCTCAAATCTATACGCAGCTTCAGGGAGATGGAGGGAAGTTCGTGAGATGAGATCGAAAATGAGAGACAAAGGAGTGAAAAAAGTTCCTGGATATAGTTGGGTTGAAATACAAAACAAGACTCACATCTTCACTGTTGGAGATTGTTCACATCCAGAAGCAGAAAGGATATATGCTTATTTAGAAGAGTTGGATTTAGAATTGAAGAAGGATGGGTTTGTTTCTTCTACTAAATTGGTGTTACATGACGTGGAAGAGGAGGAGAAGGAACACATGCTCAAGTATCATAGTGAAAAATTAGCGGTTGCATTTGGGATTTTATCTATACCACCTGGGAGACCAATCCGAGTAATTAAAAACTTGAGGGTATGTGAAGACTGTCACAATGCCATCAAACACATATCCAAAATTACGCAAAGACAAATAATCGTGAGGGATTCTAATCGCTTTCACCACTTCAGCGAAGGTTCATGTTCTTGTGGAGATTATTGGTGA

Coding sequence (CDS)

ATGCAAGCGCGCGGGAACTGCCGTTTCAGCCTGTTTATTGGCAGCTCTTCACGATCGATTCAAACTGAATCCATCACCAATAAGCTTCGAGCTTCTTCAACTTCTTCTCCGTCGAAGAAAACATGGACCCAAAAACTCGAATCCAAAAACTCTGACTCCACAATTGTGGATTCCGATATAGTCAAATGGAACAGGAAAATCAGCGCCTACATGCGCAAAGGCCAATGCGAGTCCGCTCTAAGTGTTTTCAATGGTATGCGTCGTCGGAGTACTGTCACCTACAACGCTATGATATCTGGGTATTTGAGTAACAATAAATTTGATTGTGCACGGAAGGTGTTTGAGAAAATGCCCGATAGAGATTTGATATCTTGGAATGTTATGCTTAGTGGTTATGTGAAGAATGGTAATCTTAGTGCGGCTCGGGCTTTGTTTAATCAGATGCCTGAGAAGGATGTTGTTTCTTGGAATGCTATGTTATCTGGGTTTGCTCAGAATGGGTTTGTGGAGGAGGCTAGGAAGATATTTGATCAAATGTTGGTTAAGAATGAAATTTCGTGGAATGGGTTACTGTCCGCGTATGTTCAGAATGGGAGGATTGAGGATGCTAGAAGATTGTTTGATTCGAAAATGGATTGGGAGATCGTTTCTTGGAATTGTTTGATGGGTGGGTATGTAAGGAAAAAGAGGCTAGATGATGCAAGGAGTCTTTTTGACCGTATGCCAGTTAGAGATAAAATCTCTTGGAATATAATGATTACAGGTTATGCTCAGAATGGGCTGCTTTCAGAAGCTCGGAGATTGTTTGAAGAGTTACCAATTCGAGATGTGTTTGCTTGGACGGCCATGGTTTCTGGTTTTGTGCAGAATGGGATGTTGGATGAAGCAACGAGAATTTTTGAAGAAATGCCTGAGAAGAATGAAGTTTCGTGGAATGCAATGATTGCAGGTTATGTGCAGAGCCAGCAAATAGAAAAGGCAAGGGAATTATTTGATCAAATGCCTTCCCGGAATACCAGTTCTTGGAATACAATGGTAACTGGGTATGCTCAGTGTGGCAATATTGATCAAGCCAAGATTTTGTTTGATGAGATGCCTCAACGTGATTGTATATCATGGGCGGCAATGATTTCTGGCTATGCCCAAAGCGGCCAGAGTGAAGAGGCTTTGCACCTTTTTATTAAGATGAAAAGAGATGGGGGAATTTTGAATAGATCTGCGTTAGCATGTGCTTTGAGCTCGTGTGCAGAGATTGCTGCTTTGGAGTTAGGGAAGCAACTACATGGACGACTGGTTAAGGCAGGATTCCAAACTGGGTATATTGCTGGAAATGCACTTCTAGCCATGTATGGCAAATGCGGAAGTATAGAAGAGGCATTTGATGTATTTGAAGATATAACAGAGAAGGATATTGTCTCCTGGAACACAATGATTGCAGGTTATGCAAGGCATGGGTTTGGTAAAGAGGCTTTAGCTCTTTTCGAGTCAATGAAGATGACAATCAAACCTGATGATGTCACTCTGGTCGGTGTTCTATCTGCTTGCAGCCATACTGGCTTGGTAGATAAAGGCATGGAATATTTTAACTCAATGTATCAGAACTACGGCATAACAGCAAATGCCAAACATTACACTTGCATGATCGATCTACTTGGTCGTGCGGGTCGGCTAGATGAGGCTCTGAATTTAATGAAGAGCATGCCATTTTACCCAGACGCAGCAACTTGGGGTGCTTTACTCGGAGCCAGCCGAATTCATGGTGACACAGAATTAGGTGAGAAGGCTGCTGAGAAGGTATTTGAGATGGAGCCTGATAATTCAGGGATGTACGTTCTTCTCTCAAATCTATACGCAGCTTCAGGGAGATGGAGGGAAGTTCGTGAGATGAGATCGAAAATGAGAGACAAAGGAGTGAAAAAAGTTCCTGGATATAGTTGGGTTGAAATACAAAACAAGACTCACATCTTCACTGTTGGAGATTGTTCACATCCAGAAGCAGAAAGGATATATGCTTATTTAGAAGAGTTGGATTTAGAATTGAAGAAGGATGGGTTTGTTTCTTCTACTAAATTGGTGTTACATGACGTGGAAGAGGAGGAGAAGGAACACATGCTCAAGTATCATAGTGAAAAATTAGCGGTTGCATTTGGGATTTTATCTATACCACCTGGGAGACCAATCCGAGTAATTAAAAACTTGAGGGTATGTGAAGACTGTCACAATGCCATCAAACACATATCCAAAATTACGCAAAGACAAATAATCGTGAGGGATTCTAATCGCTTTCACCACTTCAGCGAAGGTTCATGTTCTTGTGGAGATTATTGGTGA

Protein sequence

MQARGNCRFSLFIGSSSRSIQTESITNKLRASSTSSPSKKTWTQKLESKNSDSTIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW
Homology
[Close]
BLAST of CsaV3_1G004250 vs. NCBI nr
Match: XP_004137551.2 (PREDICTED: pentatricopeptide repeat-containing protein At4g02750 [Cucumis sativus] >KGN63866.1 hypothetical protein Csa_1G024980 [Cucumis sativus])

HSP 1 Score: 827.0 bits (2135), Expect = 5.3e-236
Identity = 776/776 (100.00%), Postives = 776/776 (100.00%), Query Frame = 0 

Query: 1   MQARGNCRFSLFIGSSSRSIQTESITNKLRASSTSSPSKKTWTQKLESKNSDSTIVDSDI 60
           MQARGNCRFSLFIGSSSRSIQTESITNKLRASSTSSPSKKTWTQKLESKNSDSTIVDSDI
Sbjct: 1   MQARGNCRFSLFIGSSSRSIQTESITNKLRASSTSSPSKKTWTQKLESKNSDSTIVDSDI 60

Query: 61  VKWNRKISAYMRKGQCESALSVFNGMRRRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           VKWNRKISAYMRKGQCESALSVFNGMRRRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  VKWNRKISAYMRKGQCESALSVFNGMRRRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGILNRSALACALSSCAEIAA 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGILNRSALACALSSCAEIAA
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGILNRSALACALSSCAEIAA 420

Query: 421 LELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAG 480
           LELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAG
Sbjct: 421 LELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAG 480

Query: 481 YARHGFGKEALALFESMKMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITAN 540
           YARHGFGKEALALFESMKMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITAN
Sbjct: 481 YARHGFGKEALALFESMKMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITAN 540

Query: 541 AKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVF 600
           AKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVF
Sbjct: 541 AKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVF 600

Query: 601 EMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGD 660
           EMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGD
Sbjct: 601 EMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGD 660

Query: 661 CSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILS 720
           CSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILS
Sbjct: 661 CSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILS 720

Query: 721 IPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 777
           IPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW
Sbjct: 721 IPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776

[Close]
BLAST of CsaV3_1G004250 vs. NCBI nr
Match: XP_016901413.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g02750 [Cucumis melo])

HSP 1 Score: 794.3 bits (2050), Expect = 3.8e-226
Identity = 761/776 (98.07%), Postives = 766/776 (98.71%), Query Frame = 0 

Query: 1   MQARGNCRFSLFIGSSSRSIQTESITNKLRASSTSSPSKKTWTQKLESKNSDSTIVDSDI 60
           MQARGNCRFSLFIGSSSRSIQTESITNKLRASS SSPSKKTWTQKLESKN+D TIVDSDI
Sbjct: 1   MQARGNCRFSLFIGSSSRSIQTESITNKLRASSNSSPSKKTWTQKLESKNTDPTIVDSDI 60

Query: 61  VKWNRKISAYMRKGQCESALSVFNGMRRRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           VKWNRKISAYMRKGQCESALSVFNGM RRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  VKWNRKISAYMRKGQCESALSVFNGMPRRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGILNRSALACALSSCAEIAA 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  GILNRSAL  ALSSCAEIAA
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGILNRSALVGALSSCAEIAA 420

Query: 421 LELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAG 480
           LELGKQLHGRLVKAGF+TGY AGNALLAMY KCGSIEEAFDVFEDITEKDIVSWNTMIAG
Sbjct: 421 LELGKQLHGRLVKAGFETGYYAGNALLAMYCKCGSIEEAFDVFEDITEKDIVSWNTMIAG 480

Query: 481 YARHGFGKEALALFESMKMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITAN 540
           YARHGFGKEALALFESMKMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITAN
Sbjct: 481 YARHGFGKEALALFESMKMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITAN 540

Query: 541 AKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVF 600
           +KHYTCMIDLLGRAGRLDEALNLMKSMPF+PDAATWGALLGASRIHGDTELGEKAAEKVF
Sbjct: 541 SKHYTCMIDLLGRAGRLDEALNLMKSMPFHPDAATWGALLGASRIHGDTELGEKAAEKVF 600

Query: 601 EMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGD 660
           EMEPDNSGMYVLLSNLYAASGRWREVREMR KMRDKGVKKVPGYSWVEIQNKTHIFTVGD
Sbjct: 601 EMEPDNSGMYVLLSNLYAASGRWREVREMRLKMRDKGVKKVPGYSWVEIQNKTHIFTVGD 660

Query: 661 CSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILS 720
           CSHPEAERIYAYLEELDLELKK+GFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILS
Sbjct: 661 CSHPEAERIYAYLEELDLELKKEGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILS 720

Query: 721 IPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 777
           IPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW
Sbjct: 721 IPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776

[Close]
BLAST of CsaV3_1G004250 vs. NCBI nr
Match: XP_022134844.1 (pentatricopeptide repeat-containing protein At4g02750-like [Momordica charantia])

HSP 1 Score: 737.6 bits (1903), Expect = 4.2e-209
Identity = 725/776 (93.43%), Postives = 747/776 (96.26%), Query Frame = 0 

Query: 1   MQARGNCRFSLFIGSSSRSIQTESITNKLRASSTSSPSKKTWTQKLESKNSDSTIVDSDI 60
           MQARGNCRFSLF G SSRSIQTESIT+KLRASST SPSKK+ T+KLES+++  TI DSD+
Sbjct: 1   MQARGNCRFSLFCGCSSRSIQTESITSKLRASSTYSPSKKSLTRKLESQSTKPTITDSDV 60

Query: 61  VKWNRKISAYMRKGQCESALSVFNGMRRRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           VKWNRKI+A+MR GQCESAL VF GM RRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  VKWNRKITAFMRNGQCESALGVFKGMPRRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGILNRSALACALSSCAEIAA 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  DGG  NRSAL CALSSCAEIAA
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRDGGKFNRSALTCALSSCAEIAA 420

Query: 421 LELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAG 480
            ELGKQLHGRLVKAGFQTGY  GNALLAMY KCGSIEEAFDVFEDITEKDIVSWNTMIAG
Sbjct: 421 FELGKQLHGRLVKAGFQTGYYVGNALLAMYCKCGSIEEAFDVFEDITEKDIVSWNTMIAG 480

Query: 481 YARHGFGKEALALFESMKMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITAN 540
           YARHGFGKEALA+FESMK+TIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGI AN
Sbjct: 481 YARHGFGKEALAVFESMKVTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGIIAN 540

Query: 541 AKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVF 600
           +KHYTCMIDLLGRAGRLDEALNLM+ MPFYPDAATWGALLGASRIHGDTELGEKAAE +F
Sbjct: 541 SKHYTCMIDLLGRAGRLDEALNLMRDMPFYPDAATWGALLGASRIHGDTELGEKAAEMIF 600

Query: 601 EMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGD 660
           EMEPDNSGMYVLLSNLYAASGRW EVREMR KMRDKGVKKVPGYSWVE+QNK HIF+VGD
Sbjct: 601 EMEPDNSGMYVLLSNLYAASGRWSEVREMRLKMRDKGVKKVPGYSWVEVQNKIHIFSVGD 660

Query: 661 CSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILS 720
            SHPE+ERIYAYL+ELDLELKKDG+VSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGIL+
Sbjct: 661 SSHPESERIYAYLDELDLELKKDGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILA 720

Query: 721 IPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 777
           IP GRPIRVIKNLRVCEDCHNAIKHISKI +RQII+RDSNRFHHFSEGSCSCGDYW
Sbjct: 721 IPAGRPIRVIKNLRVCEDCHNAIKHISKIAKRQIILRDSNRFHHFSEGSCSCGDYW 776

[Close]
BLAST of CsaV3_1G004250 vs. NCBI nr
Match: XP_022933912.1 (pentatricopeptide repeat-containing protein At4g02750-like [Cucurbita moschata])

HSP 1 Score: 713.0 bits (1839), Expect = 1.1e-201
Identity = 712/776 (91.75%), Postives = 741/776 (95.49%), Query Frame = 0 

Query: 1   MQARGNCRFSLFIGSSSRSIQTESITNKLRASSTSSPSKKTWTQKLESKNSDSTIVDSDI 60
           MQARGNCR  L  GSSSR IQTESI N+LRA S  SPSKKT TQK ESKN++  I DSDI
Sbjct: 1   MQARGNCRLCLLRGSSSRLIQTESIINELRACSNPSPSKKTLTQKRESKNTNPAITDSDI 60

Query: 61  VKWNRKISAYMRKGQCESALSVFNGMRRRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           VKWNRKI+AYMR GQCESAL VFNGM RRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  VKWNRKITAYMRSGQCESALGVFNGMPRRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGILNRSALACALSSCAEIAA 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +G  LNRSAL CALSSCAEIAA
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRNGERLNRSALTCALSSCAEIAA 420

Query: 421 LELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAG 480
            ELGKQLHGRL+KAGFQTGY  GNALLAMY KCGSIEEA D+FEDIT+KDIVSWNT+I G
Sbjct: 421 FELGKQLHGRLIKAGFQTGYYVGNALLAMYCKCGSIEEALDIFEDITDKDIVSWNTLIVG 480

Query: 481 YARHGFGKEALALFESMKMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITAN 540
           YARHGFGKEALA+FESMKMTIKPD+VTLVGVLSACSHTGLVDKGMEYFNSM++NYGITAN
Sbjct: 481 YARHGFGKEALAVFESMKMTIKPDEVTLVGVLSACSHTGLVDKGMEYFNSMHENYGITAN 540

Query: 541 AKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVF 600
           +KHYTCMIDLLGRAGRLDEALNLMK+MPF PDAATWGALLGASRI+G+TELGEKAAE +F
Sbjct: 541 SKHYTCMIDLLGRAGRLDEALNLMKNMPFSPDAATWGALLGASRIYGNTELGEKAAEIIF 600

Query: 601 EMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGD 660
           +MEPDNSGMYVLLSNLYAASGRW EVREMR KMRDKGVKKVPGYSWVE+Q+K HIF+VGD
Sbjct: 601 KMEPDNSGMYVLLSNLYAASGRWSEVREMRMKMRDKGVKKVPGYSWVEVQSKIHIFSVGD 660

Query: 661 CSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILS 720
           CSHPE +RIYAYLEELDLELKKDG+VSSTKLVLHDVEEEEKE+MLKYHSEKLAVAFGILS
Sbjct: 661 CSHPETDRIYAYLEELDLELKKDGYVSSTKLVLHDVEEEEKENMLKYHSEKLAVAFGILS 720

Query: 721 IPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 777
           IPPGRPIRVIKNLRVCEDCHNAIKHISKI +R+II+RDSNRFHHFSEG+CSCGDYW
Sbjct: 721 IPPGRPIRVIKNLRVCEDCHNAIKHISKIAKRRIILRDSNRFHHFSEGTCSCGDYW 776

[Close]
BLAST of CsaV3_1G004250 vs. NCBI nr
Match: XP_023001422.1 (pentatricopeptide repeat-containing protein At4g02750-like [Cucurbita maxima])

HSP 1 Score: 712.2 bits (1837), Expect = 1.9e-201
Identity = 712/776 (91.75%), Postives = 741/776 (95.49%), Query Frame = 0 

Query: 1   MQARGNCRFSLFIGSSSRSIQTESITNKLRASSTSSPSKKTWTQKLESKNSDSTIVDSDI 60
           MQARGNCR SL  GSSSR IQTESI N+LRA S  SPSKKT TQK ESKN++  I DSDI
Sbjct: 1   MQARGNCRLSLLRGSSSRLIQTESIINELRACSNPSPSKKTLTQKRESKNTNPAITDSDI 60

Query: 61  VKWNRKISAYMRKGQCESALSVFNGMRRRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           VKWNRKI+AYMR GQCESAL VFNGM RR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  VKWNRKITAYMRSGQCESALGVFNGMPRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGILNRSALACALSSCAEIAA 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +G  LNRSAL CAL SCAEIAA
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNGERLNRSALTCALISCAEIAA 420

Query: 421 LELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAG 480
            ELGKQLHGRL+KAGFQTGY  GNALLAMY KCGSIEEAFD+FEDIT+KDIVSWNT+IAG
Sbjct: 421 FELGKQLHGRLIKAGFQTGYYVGNALLAMYCKCGSIEEAFDIFEDITDKDIVSWNTLIAG 480

Query: 481 YARHGFGKEALALFESMKMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITAN 540
           YARHGFGKEALA+FE+MKMT+KPD+VTLVGVLSACSHTGLVDKGMEYFNSM+QNYGITAN
Sbjct: 481 YARHGFGKEALAVFETMKMTVKPDEVTLVGVLSACSHTGLVDKGMEYFNSMHQNYGITAN 540

Query: 541 AKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVF 600
           +KHYTCMIDLLGRAGRLDEALNLMK+MPF PDAATWGALL ASRI+G+TELGEKAAE VF
Sbjct: 541 SKHYTCMIDLLGRAGRLDEALNLMKNMPFNPDAATWGALLSASRIYGNTELGEKAAEIVF 600

Query: 601 EMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGD 660
           +MEPDNSGMYVLLSNLYAASGRW EVREMR KMRDKGVKKVPGYSWVE+Q+K HIF+VGD
Sbjct: 601 KMEPDNSGMYVLLSNLYAASGRWSEVREMRMKMRDKGVKKVPGYSWVEVQSKIHIFSVGD 660

Query: 661 CSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILS 720
           CSHPE +RIYAYLEELDLELKKDG+VSSTKLVLHDVEEEEKE+MLKYHSEKLAVAFGILS
Sbjct: 661 CSHPETDRIYAYLEELDLELKKDGYVSSTKLVLHDVEEEEKENMLKYHSEKLAVAFGILS 720

Query: 721 IPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 777
           IPPGRPIRVIKNLRVCEDCHNAIKHISKI +R+II+RDSNRFHHFSEG+CSCGDYW
Sbjct: 721 IPPGRPIRVIKNLRVCEDCHNAIKHISKIAKRRIILRDSNRFHHFSEGTCSCGDYW 776

[Close]
BLAST of CsaV3_1G004250 vs. TAIR10
Match: AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 579.3 bits (1492), Expect = 3.5e-165
Identity = 268/379 (70.71%), Postives = 325/379 (85.75%), Query Frame = 0 

Query: 399 DGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEE 458
           +GG LNRS+ + ALS+CA++ ALELGKQLHGRLVK G++TG   GNALL MY KCGSIEE
Sbjct: 403 EGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEE 462

Query: 459 AFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSH 518
           A D+F+++  KDIVSWNTMIAGY+RHGFG+ AL  FESMK   +KPDD T+V VLSACSH
Sbjct: 463 ANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSH 522

Query: 519 TGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWG 578
           TGLVDKG +YF +M Q+YG+  N++HY CM+DLLGRAG L++A NLMK+MPF PDAA WG
Sbjct: 523 TGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWG 582

Query: 579 ALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKG 638
            LLGASR+HG+TEL E AA+K+F MEP+NSGMYVLLSNLYA+SGRW +V ++R +MRDKG
Sbjct: 583 TLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKG 642

Query: 639 VKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVE 698
           VKKVPGYSW+EIQNKTH F+VGD  HPE + I+A+LEELDL +KK G+VS T +VLHDVE
Sbjct: 643 VKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVE 702

Query: 699 EEEKEHMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVR 758
           EEEKE M++YHSE+LAVA+GI+ +  GRPIRVIKNLRVCEDCHNAIK++++IT R II+R
Sbjct: 703 EEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILR 762

Query: 759 DSNRFHHFSEGSCSCGDYW 777
           D+NRFHHF +GSCSCGDYW
Sbjct: 763 DNNRFHHFKDGSCSCGDYW 781

[Close]
BLAST of CsaV3_1G004250 vs. TAIR10
Match: AT3G23330.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 405.2 bits (1040), Expect = 9.0e-113
Identity = 185/371 (49.87%), Postives = 261/371 (70.35%), Query Frame = 0 

Query: 407 ALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDI 466
           A +  + +CA +A L LGKQLHG +++ GF +     +AL+ MY KCG+I+ A  +F+ +
Sbjct: 345 AFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRM 404

Query: 467 TEKDIVSWNTMIAGYARHGFGKEALALFESMK-MTIKPDDVTLVGVLSACSHTGLVDKGM 526
              D VSW  +I G+A HG G EA++LFE MK   +KP+ V  V VL+ACSH GLVD+  
Sbjct: 405 NVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAW 464

Query: 527 EYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRI 586
            YFNSM + YG+    +HY  + DLLGRAG+L+EA N +  M   P  + W  LL +  +
Sbjct: 465 GYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSV 524

Query: 587 HGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYS 646
           H + EL EK AEK+F ++ +N G YVL+ N+YA++GRW+E+ ++R +MR KG++K P  S
Sbjct: 525 HKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACS 584

Query: 647 WVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHML 706
           W+E++NKTH F  GD SHP  ++I  +L+ +  +++K+G+V+ T  VLHDV+EE K  +L
Sbjct: 585 WIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELL 644

Query: 707 KYHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHF 766
             HSE+LAVAFGI++  PG  IRV KN+R+C DCH AIK ISKIT+R+IIVRD++RFHHF
Sbjct: 645 FGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHF 704

Query: 767 SEGSCSCGDYW 777
           + G+CSCGDYW
Sbjct: 705 NRGNCSCGDYW 715

[Close]
BLAST of CsaV3_1G004250 vs. TAIR10
Match: AT3G02010.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 400.6 bits (1028), Expect = 2.2e-111
Identity = 186/375 (49.60%), Postives = 261/375 (69.60%), Query Frame = 0 

Query: 404 NRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVF 463
           ++S  A  L + A  A+L LGKQLH  ++++G      +G+ L+ MY KCGSI++A  VF
Sbjct: 451 DQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVF 510

Query: 464 EDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGLVD 523
           E++ +++ VSWN +I+ +A +G G+ A+  F  M +  ++PD V+++GVL+ACSH G V+
Sbjct: 511 EEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVE 570

Query: 524 KGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGA 583
           +G EYF +M   YGIT   KHY CM+DLLGR GR  EA  LM  MPF PD   W ++L A
Sbjct: 571 QGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNA 630

Query: 584 SRIHGDTELGEKAAEKVFEMEP-DNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKV 643
            RIH +  L E+AAEK+F ME   ++  YV +SN+YAA+G W +VR+++  MR++G+KKV
Sbjct: 631 CRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKV 690

Query: 644 PGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEK 703
           P YSWVE+ +K H+F+  D +HP  + I   + EL  E++++G+   T  V+ DV+E+ K
Sbjct: 691 PAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMK 750

Query: 704 EHMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNR 763
              LKYHSE+LAVAF ++S P G PI V+KNLR C DCH AIK ISKI +R+I VRD++R
Sbjct: 751 IESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSR 810

Query: 764 FHHFSEGSCSCGDYW 777
           FHHFSEG CSCGDYW
Sbjct: 811 FHHFSEGVCSCGDYW 825

[Close]
BLAST of CsaV3_1G004250 vs. TAIR10
Match: AT4G30700.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 397.9 bits (1021), Expect = 1.4e-110
Identity = 186/374 (49.73%), Postives = 254/374 (67.91%), Query Frame = 0 

Query: 404 NRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVF 463
           N   + C LS+CA++ AL LGK +H  +    F++      AL+ MY KCGSI EA  +F
Sbjct: 419 NPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLF 478

Query: 464 EDITEKDIVSWNTMIAGYARHGFGKEALALF-ESMKMTIKPDDVTLVGVLSACSHTGLVD 523
           + +T+K+ V+WNTMI+GY  HG G+EAL +F E +   I P  VT + VL ACSH GLV 
Sbjct: 479 DLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVK 538

Query: 524 KGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGA 583
           +G E FNSM   YG   + KHY CM+D+LGRAG L  AL  +++M   P ++ W  LLGA
Sbjct: 539 EGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGA 598

Query: 584 SRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVP 643
            RIH DT L    +EK+FE++PDN G +VLLSN+++A   + +   +R   + + + K P
Sbjct: 599 CRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAP 658

Query: 644 GYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKE 703
           GY+ +EI    H+FT GD SHP+ + IY  LE+L+ ++++ G+   T+L LHDVEEEE+E
Sbjct: 659 GYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERE 718

Query: 704 HMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRF 763
            M+K HSE+LA+AFG+++  PG  IR+IKNLRVC DCH   K ISKIT+R I+VRD+NRF
Sbjct: 719 LMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRF 778

Query: 764 HHFSEGSCSCGDYW 777
           HHF +G CSCGDYW
Sbjct: 779 HHFKDGVCSCGDYW 792

[Close]
BLAST of CsaV3_1G004250 vs. TAIR10
Match: AT4G33990.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 397.5 bits (1020), Expect = 1.9e-110
Identity = 186/374 (49.73%), Postives = 255/374 (68.18%), Query Frame = 0 

Query: 404 NRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVF 463
           N+      L +C++  AL  G +LHGRL+K G         +L  MYGKCG +E+A  +F
Sbjct: 450 NQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLF 509

Query: 464 EDITEKDIVSWNTMIAGYARHGFGKEALALF-ESMKMTIKPDDVTLVGVLSACSHTGLVD 523
             I   + V WNT+IA +  HG G++A+ LF E +   +KPD +T V +LSACSH+GLVD
Sbjct: 510 YQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVD 569

Query: 524 KGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGA 583
           +G   F  M  +YGIT + KHY CM+D+ GRAG+L+ AL  +KSM   PDA+ WGALL A
Sbjct: 570 EGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSA 629

Query: 584 SRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVP 643
            R+HG+ +LG+ A+E +FE+EP++ G +VLLSN+YA++G+W  V E+RS    KG++K P
Sbjct: 630 CRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTP 689

Query: 644 GYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKE 703
           G+S +E+ NK  +F  G+ +HP  E +Y  L  L  +LK  G+V   + VL DVE++EKE
Sbjct: 690 GWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKE 749

Query: 704 HMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRF 763
           H+L  HSE+LA+AF +++ P    IR+ KNLRVC DCH+  K ISKIT+R+IIVRDSNRF
Sbjct: 750 HILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRF 809

Query: 764 HHFSEGSCSCGDYW 777
           HHF  G CSCGDYW
Sbjct: 810 HHFKNGVCSCGDYW 823

[Close]
BLAST of CsaV3_1G004250 vs. Swiss-Prot
Match: sp|Q9SY02|PP301_ARATH (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)

HSP 1 Score: 579.3 bits (1492), Expect = 6.3e-164
Identity = 268/379 (70.71%), Postives = 325/379 (85.75%), Query Frame = 0 

Query: 399 DGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEE 458
           +GG LNRS+ + ALS+CA++ ALELGKQLHGRLVK G++TG   GNALL MY KCGSIEE
Sbjct: 403 EGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEE 462

Query: 459 AFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSH 518
           A D+F+++  KDIVSWNTMIAGY+RHGFG+ AL  FESMK   +KPDD T+V VLSACSH
Sbjct: 463 ANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSH 522

Query: 519 TGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWG 578
           TGLVDKG +YF +M Q+YG+  N++HY CM+DLLGRAG L++A NLMK+MPF PDAA WG
Sbjct: 523 TGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWG 582

Query: 579 ALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKG 638
            LLGASR+HG+TEL E AA+K+F MEP+NSGMYVLLSNLYA+SGRW +V ++R +MRDKG
Sbjct: 583 TLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKG 642

Query: 639 VKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVE 698
           VKKVPGYSW+EIQNKTH F+VGD  HPE + I+A+LEELDL +KK G+VS T +VLHDVE
Sbjct: 643 VKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVE 702

Query: 699 EEEKEHMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVR 758
           EEEKE M++YHSE+LAVA+GI+ +  GRPIRVIKNLRVCEDCHNAIK++++IT R II+R
Sbjct: 703 EEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILR 762

Query: 759 DSNRFHHFSEGSCSCGDYW 777
           D+NRFHHF +GSCSCGDYW
Sbjct: 763 DNNRFHHFKDGSCSCGDYW 781

[Close]
BLAST of CsaV3_1G004250 vs. Swiss-Prot
Match: sp|Q9LW63|PP251_ARATH (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H32 PE=3 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 1.6e-111
Identity = 185/371 (49.87%), Postives = 261/371 (70.35%), Query Frame = 0 

Query: 407 ALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDI 466
           A +  + +CA +A L LGKQLHG +++ GF +     +AL+ MY KCG+I+ A  +F+ +
Sbjct: 345 AFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRM 404

Query: 467 TEKDIVSWNTMIAGYARHGFGKEALALFESMK-MTIKPDDVTLVGVLSACSHTGLVDKGM 526
              D VSW  +I G+A HG G EA++LFE MK   +KP+ V  V VL+ACSH GLVD+  
Sbjct: 405 NVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAW 464

Query: 527 EYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRI 586
            YFNSM + YG+    +HY  + DLLGRAG+L+EA N +  M   P  + W  LL +  +
Sbjct: 465 GYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSV 524

Query: 587 HGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYS 646
           H + EL EK AEK+F ++ +N G YVL+ N+YA++GRW+E+ ++R +MR KG++K P  S
Sbjct: 525 HKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACS 584

Query: 647 WVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHML 706
           W+E++NKTH F  GD SHP  ++I  +L+ +  +++K+G+V+ T  VLHDV+EE K  +L
Sbjct: 585 WIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELL 644

Query: 707 KYHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHF 766
             HSE+LAVAFGI++  PG  IRV KN+R+C DCH AIK ISKIT+R+IIVRD++RFHHF
Sbjct: 645 FGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHF 704

Query: 767 SEGSCSCGDYW 777
           + G+CSCGDYW
Sbjct: 705 NRGNCSCGDYW 715

[Close]
BLAST of CsaV3_1G004250 vs. Swiss-Prot
Match: sp|Q9S7F4|PP206_ARATH (Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H36 PE=3 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 4.0e-110
Identity = 186/375 (49.60%), Postives = 261/375 (69.60%), Query Frame = 0 

Query: 404 NRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVF 463
           ++S  A  L + A  A+L LGKQLH  ++++G      +G+ L+ MY KCGSI++A  VF
Sbjct: 451 DQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVF 510

Query: 464 EDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGLVD 523
           E++ +++ VSWN +I+ +A +G G+ A+  F  M +  ++PD V+++GVL+ACSH G V+
Sbjct: 511 EEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVE 570

Query: 524 KGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGA 583
           +G EYF +M   YGIT   KHY CM+DLLGR GR  EA  LM  MPF PD   W ++L A
Sbjct: 571 QGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNA 630

Query: 584 SRIHGDTELGEKAAEKVFEMEP-DNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKV 643
            RIH +  L E+AAEK+F ME   ++  YV +SN+YAA+G W +VR+++  MR++G+KKV
Sbjct: 631 CRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKV 690

Query: 644 PGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEK 703
           P YSWVE+ +K H+F+  D +HP  + I   + EL  E++++G+   T  V+ DV+E+ K
Sbjct: 691 PAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMK 750

Query: 704 EHMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNR 763
              LKYHSE+LAVAF ++S P G PI V+KNLR C DCH AIK ISKI +R+I VRD++R
Sbjct: 751 IESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSR 810

Query: 764 FHHFSEGSCSCGDYW 777
           FHHFSEG CSCGDYW
Sbjct: 811 FHHFSEGVCSCGDYW 825

[Close]
BLAST of CsaV3_1G004250 vs. Swiss-Prot
Match: sp|Q9SUH6|PP341_ARATH (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX=3702 GN=DYW9 PE=2 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 2.6e-109
Identity = 186/374 (49.73%), Postives = 254/374 (67.91%), Query Frame = 0 

Query: 404 NRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVF 463
           N   + C LS+CA++ AL LGK +H  +    F++      AL+ MY KCGSI EA  +F
Sbjct: 419 NPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLF 478

Query: 464 EDITEKDIVSWNTMIAGYARHGFGKEALALF-ESMKMTIKPDDVTLVGVLSACSHTGLVD 523
           + +T+K+ V+WNTMI+GY  HG G+EAL +F E +   I P  VT + VL ACSH GLV 
Sbjct: 479 DLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVK 538

Query: 524 KGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGA 583
           +G E FNSM   YG   + KHY CM+D+LGRAG L  AL  +++M   P ++ W  LLGA
Sbjct: 539 EGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGA 598

Query: 584 SRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVP 643
            RIH DT L    +EK+FE++PDN G +VLLSN+++A   + +   +R   + + + K P
Sbjct: 599 CRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAP 658

Query: 644 GYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKE 703
           GY+ +EI    H+FT GD SHP+ + IY  LE+L+ ++++ G+   T+L LHDVEEEE+E
Sbjct: 659 GYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERE 718

Query: 704 HMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRF 763
            M+K HSE+LA+AFG+++  PG  IR+IKNLRVC DCH   K ISKIT+R I+VRD+NRF
Sbjct: 719 LMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRF 778

Query: 764 HHFSEGSCSCGDYW 777
           HHF +G CSCGDYW
Sbjct: 779 HHFKDGVCSCGDYW 792

[Close]
BLAST of CsaV3_1G004250 vs. Swiss-Prot
Match: sp|Q9SMZ2|PP347_ARATH (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H53 PE=3 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 3.4e-109
Identity = 187/365 (51.23%), Postives = 258/365 (70.68%), Query Frame = 0 

Query: 413 SSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIV 472
           SSC  + ALE G+Q+H   +K         G +L+ MY KCGSI++A+ +F+ I   +I 
Sbjct: 628 SSC--LTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNIT 687

Query: 473 SWNTMIAGYARHGFGKEALALFESMK-MTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSM 532
           +WN M+ G A+HG GKE L LF+ MK + IKPD VT +GVLSACSH+GLV +  ++  SM
Sbjct: 688 AWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSM 747

Query: 533 YQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTEL 592
           + +YGI    +HY+C+ D LGRAG + +A NL++SM     A+ +  LL A R+ GDTE 
Sbjct: 748 HGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTET 807

Query: 593 GEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQN 652
           G++ A K+ E+EP +S  YVLLSN+YAA+ +W E++  R+ M+   VKK PG+SW+E++N
Sbjct: 808 GKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKN 867

Query: 653 KTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEK 712
           K HIF V D S+ + E IY  ++++  ++K++G+V  T   L DVEEEEKE  L YHSEK
Sbjct: 868 KIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEK 927

Query: 713 LAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCS 772
           LAVAFG+LS PP  PIRVIKNLRVC DCHNA+K+I+K+  R+I++RD+NRFH F +G CS
Sbjct: 928 LAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICS 987

Query: 773 CGDYW 777
           CGDYW
Sbjct: 988 CGDYW 990

[Close]
BLAST of CsaV3_1G004250 vs. TrEMBL
Match: tr|A0A0A0LV20|A0A0A0LV20_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G024980 PE=4 SV=1)

HSP 1 Score: 827.0 bits (2135), Expect = 3.5e-236
Identity = 776/776 (100.00%), Postives = 776/776 (100.00%), Query Frame = 0 

Query: 1   MQARGNCRFSLFIGSSSRSIQTESITNKLRASSTSSPSKKTWTQKLESKNSDSTIVDSDI 60
           MQARGNCRFSLFIGSSSRSIQTESITNKLRASSTSSPSKKTWTQKLESKNSDSTIVDSDI
Sbjct: 1   MQARGNCRFSLFIGSSSRSIQTESITNKLRASSTSSPSKKTWTQKLESKNSDSTIVDSDI 60

Query: 61  VKWNRKISAYMRKGQCESALSVFNGMRRRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           VKWNRKISAYMRKGQCESALSVFNGMRRRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  VKWNRKISAYMRKGQCESALSVFNGMRRRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGILNRSALACALSSCAEIAA 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGILNRSALACALSSCAEIAA
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGILNRSALACALSSCAEIAA 420

Query: 421 LELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAG 480
           LELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAG
Sbjct: 421 LELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAG 480

Query: 481 YARHGFGKEALALFESMKMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITAN 540
           YARHGFGKEALALFESMKMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITAN
Sbjct: 481 YARHGFGKEALALFESMKMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITAN 540

Query: 541 AKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVF 600
           AKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVF
Sbjct: 541 AKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVF 600

Query: 601 EMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGD 660
           EMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGD
Sbjct: 601 EMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGD 660

Query: 661 CSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILS 720
           CSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILS
Sbjct: 661 CSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILS 720

Query: 721 IPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 777
           IPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW
Sbjct: 721 IPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776

[Close]
BLAST of CsaV3_1G004250 vs. TrEMBL
Match: tr|A0A1S4DZK6|A0A1S4DZK6_CUCME (pentatricopeptide repeat-containing protein At4g02750 OS=Cucumis melo OX=3656 GN=LOC103494175 PE=4 SV=1)

HSP 1 Score: 794.3 bits (2050), Expect = 2.5e-226
Identity = 761/776 (98.07%), Postives = 766/776 (98.71%), Query Frame = 0 

Query: 1   MQARGNCRFSLFIGSSSRSIQTESITNKLRASSTSSPSKKTWTQKLESKNSDSTIVDSDI 60
           MQARGNCRFSLFIGSSSRSIQTESITNKLRASS SSPSKKTWTQKLESKN+D TIVDSDI
Sbjct: 1   MQARGNCRFSLFIGSSSRSIQTESITNKLRASSNSSPSKKTWTQKLESKNTDPTIVDSDI 60

Query: 61  VKWNRKISAYMRKGQCESALSVFNGMRRRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           VKWNRKISAYMRKGQCESALSVFNGM RRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  VKWNRKISAYMRKGQCESALSVFNGMPRRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGILNRSALACALSSCAEIAA 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  GILNRSAL  ALSSCAEIAA
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGILNRSALVGALSSCAEIAA 420

Query: 421 LELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAG 480
           LELGKQLHGRLVKAGF+TGY AGNALLAMY KCGSIEEAFDVFEDITEKDIVSWNTMIAG
Sbjct: 421 LELGKQLHGRLVKAGFETGYYAGNALLAMYCKCGSIEEAFDVFEDITEKDIVSWNTMIAG 480

Query: 481 YARHGFGKEALALFESMKMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITAN 540
           YARHGFGKEALALFESMKMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITAN
Sbjct: 481 YARHGFGKEALALFESMKMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITAN 540

Query: 541 AKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVF 600
           +KHYTCMIDLLGRAGRLDEALNLMKSMPF+PDAATWGALLGASRIHGDTELGEKAAEKVF
Sbjct: 541 SKHYTCMIDLLGRAGRLDEALNLMKSMPFHPDAATWGALLGASRIHGDTELGEKAAEKVF 600

Query: 601 EMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGD 660
           EMEPDNSGMYVLLSNLYAASGRWREVREMR KMRDKGVKKVPGYSWVEIQNKTHIFTVGD
Sbjct: 601 EMEPDNSGMYVLLSNLYAASGRWREVREMRLKMRDKGVKKVPGYSWVEIQNKTHIFTVGD 660

Query: 661 CSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILS 720
           CSHPEAERIYAYLEELDLELKK+GFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILS
Sbjct: 661 CSHPEAERIYAYLEELDLELKKEGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILS 720

Query: 721 IPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 777
           IPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW
Sbjct: 721 IPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776

[Close]
BLAST of CsaV3_1G004250 vs. TrEMBL
Match: tr|A0A2I4FKA6|A0A2I4FKA6_9ROSI (pentatricopeptide repeat-containing protein At4g02750 OS=Juglans regia OX=51240 GN=LOC108999630 PE=4 SV=1)

HSP 1 Score: 638.3 bits (1645), Expect = 2.3e-179
Identity = 304/379 (80.21%), Postives = 342/379 (90.24%), Query Frame = 0 

Query: 399 DGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEE 458
           DG  LNRS+  C+L +CA++AALELGKQLHG+LVKAG++TG   GNALLAMY KCG I+E
Sbjct: 402 DGERLNRSSFTCSLRACADVAALELGKQLHGQLVKAGYETGCYVGNALLAMYCKCGDIDE 461

Query: 459 AFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMK-MTIKPDDVTLVGVLSACSH 518
           A+DVFEDI EKD+VSWNTMIAGYARHGFGKEAL +FESMK + I PDDVT+VGVLSACSH
Sbjct: 462 AYDVFEDIAEKDVVSWNTMIAGYARHGFGKEALMVFESMKTVGINPDDVTMVGVLSACSH 521

Query: 519 TGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWG 578
           TGLVDKG +YF SM ++YGITAN+KHYTCMIDLLGRAGRLDEA NLM++MPF PDAATWG
Sbjct: 522 TGLVDKGTQYFYSMDRDYGITANSKHYTCMIDLLGRAGRLDEAQNLMRNMPFEPDAATWG 581

Query: 579 ALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKG 638
           A+LGASRIHG+TELGEKAAE +FEMEPDN+GMYVLLSNLYAASGRW +V +MR KMRD G
Sbjct: 582 AVLGASRIHGNTELGEKAAEMIFEMEPDNAGMYVLLSNLYAASGRWVDVSKMRLKMRDSG 641

Query: 639 VKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVE 698
           VKKVPGYSW+E+QN  H F+VGD  HP+ E+IYA+LEELDL++K DG+VSSTKLVLHDVE
Sbjct: 642 VKKVPGYSWLEVQNMIHTFSVGDHFHPDREKIYAFLEELDLKMKLDGYVSSTKLVLHDVE 701

Query: 699 EEEKEHMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVR 758
           EEEKEHMLKYHSEKLAVAFGILSIP GRPIRV+KNLRVCEDCHNAIKHISKI  R II+R
Sbjct: 702 EEEKEHMLKYHSEKLAVAFGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIEGRLIILR 761

Query: 759 DSNRFHHFSEGSCSCGDYW 777
           DS+RFHHFS GSCSCGDYW
Sbjct: 762 DSHRFHHFSGGSCSCGDYW 780

[Close]
BLAST of CsaV3_1G004250 vs. TrEMBL
Match: tr|A0A2I4H5U6|A0A2I4H5U6_9ROSI (pentatricopeptide repeat-containing protein At4g02750-like OS=Juglans regia OX=51240 GN=LOC109013780 PE=4 SV=1)

HSP 1 Score: 638.3 bits (1645), Expect = 2.3e-179
Identity = 304/379 (80.21%), Postives = 342/379 (90.24%), Query Frame = 0 

Query: 399 DGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEE 458
           DG  LNRS+  C+L +CA++AALELGKQLHG+LVKAG++TG   GNALLAMY KCG I+E
Sbjct: 35  DGERLNRSSFTCSLRACADVAALELGKQLHGQLVKAGYETGCYVGNALLAMYCKCGDIDE 94

Query: 459 AFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMK-MTIKPDDVTLVGVLSACSH 518
           A+DVFEDI EKD+VSWNTMIAGYARHGFGKEAL +FESMK + I PDDVT+VGVLSACSH
Sbjct: 95  AYDVFEDIAEKDVVSWNTMIAGYARHGFGKEALMVFESMKTVGINPDDVTMVGVLSACSH 154

Query: 519 TGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWG 578
           TGLVDKG +YF SM ++YGITAN+KHYTCMIDLLGRAGRLDEA NLM++MPF PDAATWG
Sbjct: 155 TGLVDKGTQYFYSMDRDYGITANSKHYTCMIDLLGRAGRLDEAQNLMRNMPFEPDAATWG 214

Query: 579 ALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKG 638
           A+LGASRIHG+TELGEKAAE +FEMEPDN+GMYVLLSNLYAASGRW +V +MR KMRD G
Sbjct: 215 AVLGASRIHGNTELGEKAAEMIFEMEPDNAGMYVLLSNLYAASGRWVDVSKMRLKMRDSG 274

Query: 639 VKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVE 698
           VKKVPGYSW+E+QN  H F+VGD  HP+ E+IYA+LEELDL++K DG+VSSTKLVLHDVE
Sbjct: 275 VKKVPGYSWLEVQNMIHTFSVGDHFHPDREKIYAFLEELDLKMKLDGYVSSTKLVLHDVE 334

Query: 699 EEEKEHMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVR 758
           EEEKEHMLKYHSEKLAVAFGILSIP GRPIRV+KNLRVCEDCHNAIKHISKI  R II+R
Sbjct: 335 EEEKEHMLKYHSEKLAVAFGILSIPAGRPIRVMKNLRVCEDCHNAIKHISKIEGRLIILR 394

Query: 759 DSNRFHHFSEGSCSCGDYW 777
           DS+RFHHFS GSCSCGDYW
Sbjct: 395 DSHRFHHFSGGSCSCGDYW 413

[Close]
BLAST of CsaV3_1G004250 vs. TrEMBL
Match: tr|A0A2R6P350|A0A2R6P350_ACTCH (Pentatricopeptide repeat-containing protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc21817 PE=4 SV=1)

HSP 1 Score: 630.9 bits (1626), Expect = 3.7e-177
Identity = 301/379 (79.42%), Postives = 334/379 (88.13%), Query Frame = 0 

Query: 399 DGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEE 458
           DG  LNRS   C LS+CA+IAALELG Q+HGRLVKAGF+ G   GNALLAMY KCGSI+E
Sbjct: 404 DGERLNRSTFTCVLSTCADIAALELGMQMHGRLVKAGFERGCYVGNALLAMYCKCGSIDE 463

Query: 459 AFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSH 518
           AF+VFE I+EKD VSWNTMIAGYARHGFGKEAL +FESMKM  I+PDDVT+VGVLSACSH
Sbjct: 464 AFNVFEGISEKDAVSWNTMIAGYARHGFGKEALKIFESMKMAGIRPDDVTMVGVLSACSH 523

Query: 519 TGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWG 578
           TGLVD+G EYF SMYQ+YGITAN+KHYTCMIDLLGRAGRLD+A NLM SMPF PDAATWG
Sbjct: 524 TGLVDRGTEYFYSMYQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMNSMPFEPDAATWG 583

Query: 579 ALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKG 638
           ALLGASRIHG+TEL EKAAE VF MEP+N+GMYVLLSNLYAASGRW +V E+R KMRD G
Sbjct: 584 ALLGASRIHGNTELAEKAAEMVFRMEPENAGMYVLLSNLYAASGRWSDVSELRLKMRDTG 643

Query: 639 VKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVE 698
           V+K+PGYSWVE+QNK H F+VGD +HP+  RIY +LEELDL +K+DG+V STKLVLHDV+
Sbjct: 644 VRKIPGYSWVEVQNKIHTFSVGDSTHPDRGRIYTFLEELDLRMKRDGYVCSTKLVLHDVD 703

Query: 699 EEEKEHMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVR 758
           EEEKEHMLKYHSEKLAVAFGIL+IP GRPIRVIKNLRVC DCH AIKHISKI  R II+R
Sbjct: 704 EEEKEHMLKYHSEKLAVAFGILNIPAGRPIRVIKNLRVCADCHTAIKHISKIVGRVIILR 763

Query: 759 DSNRFHHFSEGSCSCGDYW 777
           DS+RFHHFS G CSCGDYW
Sbjct: 764 DSHRFHHFSGGVCSCGDYW 782

The following BLAST results are available for this feature:
BLAST of CsaV3_1G004250 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004137551.25.3e-236100.00PREDICTED: pentatricopeptide repeat-containing protein At4g02750 [Cucumis sativu... [more]
XP_016901413.13.8e-22698.07PREDICTED: pentatricopeptide repeat-containing protein At4g02750 [Cucumis melo][more]
XP_022134844.14.2e-20993.43pentatricopeptide repeat-containing protein At4g02750-like [Momordica charantia][more]
XP_022933912.11.1e-20191.75pentatricopeptide repeat-containing protein At4g02750-like [Cucurbita moschata][more]
XP_023001422.11.9e-20191.75pentatricopeptide repeat-containing protein At4g02750-like [Cucurbita maxima][more]
BLAST of CsaV3_1G004250 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G02750.13.5e-16570.71Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G23330.19.0e-11349.87Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G02010.12.2e-11149.60Pentatricopeptide repeat (PPR) superfamily protein[more]
AT4G30700.11.4e-11049.73Pentatricopeptide repeat (PPR) superfamily protein[more]
AT4G33990.11.9e-11049.73Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of CsaV3_1G004250 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SY02|PP301_ARATH6.3e-16470.71Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX... [more]
sp|Q9LW63|PP251_ARATH1.6e-11149.87Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis th... [more]
sp|Q9S7F4|PP206_ARATH4.0e-11049.60Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis th... [more]
sp|Q9SUH6|PP341_ARATH2.6e-10949.73Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX... [more]
sp|Q9SMZ2|PP347_ARATH3.4e-10951.23Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX... [more]
BLAST of CsaV3_1G004250 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LV20|A0A0A0LV20_CUCSA3.5e-236100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G024980 PE=4 SV=1[more]
tr|A0A1S4DZK6|A0A1S4DZK6_CUCME2.5e-22698.07pentatricopeptide repeat-containing protein At4g02750 OS=Cucumis melo OX=3656 GN... [more]
tr|A0A2I4FKA6|A0A2I4FKA6_9ROSI2.3e-17980.21pentatricopeptide repeat-containing protein At4g02750 OS=Juglans regia OX=51240 ... [more]
tr|A0A2I4H5U6|A0A2I4H5U6_9ROSI2.3e-17980.21pentatricopeptide repeat-containing protein At4g02750-like OS=Juglans regia OX=5... [more]
tr|A0A2R6P350|A0A2R6P350_ACTCH3.7e-17779.42Pentatricopeptide repeat-containing protein OS=Actinidia chinensis var. chinensi... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR032867DYW_dom
IPR011990TPR-like_helical_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G004250.1CsaV3_1G004250.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 213..274
e-value: 1.1E-15
score: 59.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 275..368
e-value: 1.3E-25
score: 92.4
coord: 53..212
e-value: 1.3E-41
score: 145.0
coord: 372..533
e-value: 2.4E-38
score: 134.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 534..699
e-value: 5.4E-16
score: 61.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILYSSF48452TPR-likecoord: 316..396
coord: 512..629
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILYSSF48452TPR-likecoord: 218..365
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILYSSF48452TPR-likecoord: 66..210
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 642..765
e-value: 1.2E-41
score: 141.4
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 469..516
e-value: 2.1E-9
score: 37.3
coord: 90..121
e-value: 1.5E-7
score: 31.4
coord: 306..338
e-value: 1.1E-7
score: 31.8
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 185..208
e-value: 1.5E-4
score: 21.7
coord: 67..89
e-value: 0.0043
score: 17.1
coord: 341..370
e-value: 3.2E-7
score: 30.1
coord: 609..638
e-value: 0.12
score: 12.6
coord: 371..400
e-value: 1.0E-7
score: 31.6
coord: 123..152
e-value: 1.7E-7
score: 30.9
coord: 154..182
e-value: 2.1E-8
score: 33.8
coord: 216..242
e-value: 1.8E-6
score: 27.7
coord: 247..272
e-value: 3.8E-7
score: 29.8
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 536..567
e-value: 2.2E-5
score: 24.0
coord: 276..303
e-value: 1.4E-5
score: 24.6
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 123..154
e-value: 1.1E-7
score: 29.5
coord: 444..472
e-value: 7.4E-4
score: 17.5
coord: 154..182
e-value: 3.9E-7
score: 27.8
coord: 216..245
e-value: 5.4E-7
score: 27.4
coord: 472..498
e-value: 5.6E-6
score: 24.2
coord: 341..370
e-value: 5.4E-5
score: 21.1
coord: 92..121
e-value: 3.9E-7
score: 27.8
coord: 279..307
e-value: 4.0E-6
score: 24.7
coord: 371..400
e-value: 1.0E-5
score: 23.4
coord: 309..338
e-value: 3.0E-7
score: 28.2
coord: 544..567
e-value: 1.0E-4
score: 20.2
coord: 247..272
e-value: 2.5E-5
score: 22.1
coord: 185..208
e-value: 5.1E-5
score: 21.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 245..275
score: 10.095
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 121..155
score: 11.718
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 311..337
score: 7.432
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 540..570
score: 8.616
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 156..182
score: 7.662
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 504..534
score: 7.026
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 404..438
score: 5.645
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 218..244
score: 6.982
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 338..372
score: 11.685
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 606..640
score: 9.065
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 276..310
score: 11.663
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 439..469
score: 7.41
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 373..403
score: 8.046
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 183..217
score: 10.041
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 59..89
score: 8.747
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 470..500
score: 10.413
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 90..120
score: 10.424
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..46
NoneNo IPR availablePANTHERPTHR24015:SF424SUBFAMILY NOT NAMEDcoord: 104..300
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 58..111
coord: 296..342
coord: 104..300
coord: 338..693
NoneNo IPR availablePANTHERPTHR24015:SF424SUBFAMILY NOT NAMEDcoord: 58..111
coord: 296..342
coord: 338..693

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_1G004250CSPI01G04250Wild cucumber (PI 183967)cpicucB001
CsaV3_1G004250Cucsa.111470Cucumber (Gy14) v1cgycucB143
CsaV3_1G004250CmaCh11G003050Cucurbita maxima (Rimu)cmacucB0101
CsaV3_1G004250CmoCh11G003090Cucurbita moschata (Rifu)cmocucB0091
CsaV3_1G004250Cp4.1LG04g13930Cucurbita pepo (Zucchini)cpecucB0815
CsaV3_1G004250CsGy1G004140Cucumber (Gy14) v2cgybcucB002
CsaV3_1G004250Carg09109Silver-seed gourdcarcucB0629
CsaV3_1G004250Cla018933Watermelon (97103) v1cucwmB106
CsaV3_1G004250ClCG06G014410Watermelon (Charleston Gray)cucwcgB089
CsaV3_1G004250Lsi06G012950Bottle gourd (USVL1VR-Ls)cuclsiB082
CsaV3_1G004250MELO3C029742.2Melon (DHL92) v3.6.1cucmedB051
CsaV3_1G004250Cla97C06G123880Watermelon (97103) v2cucwmbB077
CsaV3_1G004250Bhi02G000092Wax gourdcucwgoB085
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_1G004250Cucumber (Chinese Long) v3cuccucB000
CsaV3_1G004250Silver-seed gourdcarcucB0419
CsaV3_1G004250Silver-seed gourdcarcucB0824
CsaV3_1G004250Cucumber (Gy14) v2cgybcucB003
CsaV3_1G004250Cucumber (Gy14) v1cgycucB164
CsaV3_1G004250Cucurbita maxima (Rimu)cmacucB0060
CsaV3_1G004250Cucurbita maxima (Rimu)cmacucB0252
CsaV3_1G004250Cucurbita maxima (Rimu)cmacucB0466
CsaV3_1G004250Cucurbita moschata (Rifu)cmocucB0046
CsaV3_1G004250Cucurbita moschata (Rifu)cmocucB0238
CsaV3_1G004250Cucurbita pepo (Zucchini)cpecucB0033
CsaV3_1G004250Cucurbita pepo (Zucchini)cpecucB0444
CsaV3_1G004250Cucurbita pepo (Zucchini)cpecucB0627
CsaV3_1G004250Wild cucumber (PI 183967)cpicucB002
CsaV3_1G004250Bottle gourd (USVL1VR-Ls)cuclsiB024
CsaV3_1G004250Melon (DHL92) v3.5.1cucmeB026
CsaV3_1G004250Melon (DHL92) v3.5.1cucmeB055
CsaV3_1G004250Melon (DHL92) v3.6.1cucmedB024
CsaV3_1G004250Watermelon (Charleston Gray)cucwcgB064
CsaV3_1G004250Watermelon (97103) v1cucwmB071
CsaV3_1G004250Watermelon (97103) v2cucwmbB055
CsaV3_1G004250Wax gourdcucwgoB042