CsaV3_1G004040 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTCACGTGGGATGCAAAATATTCCTTTTAGCTCGATTTAAGAAGAGTGAGTTCAATCAGAACTCACACCTATTAACATAAGCAAGGCAGCTACACATCCAACCTTCATTAATCTTCTCAAACATGTAAGTACTCTTTAATTTCCATATTTACTATTAAGCTTCCCAATCTTATTTAAATTCCCTCTAATTTCTTATGATTATTCTTTTTTTTTTTCTTCCTGTTATCACAATTACTGAATTATTTAAATTTAATCCACCTTAACGATCGAGTACTTTGATATTAACTTGGCCTCACCGTATCTAGACCTCTCTCCTTTAGTTTGTAAGCAAAGAAGCACAGTCAGATGCATCATAGATATGGTACCAATACCCCCAGATACTTCCTAGATGGTATTTGATATTCGACCTGCCTTTTTTTTTTTCTCTCTCAATACATGTGTCTCCTGGGATTTGTTGGACCTTTTAAGAGAAAGAAAGAAGAAAGAAAACTCATGTAATCTTCTCCAACCCAAAACTAAGTAGCCTATTGAAAAAGTCCACTGCACCAACCAAAAACTAAAGGAGAGAAAAGAAAATCAAACTCTAGAATCATTTAATCTACATCTTAAGTTTTGAGTCTTCACAGAGTCACGTTCAAAAGAAAAAGGAAAAAGGAACCCACTTGAATATGTATCTGTCTCCCAATTCTTTTAAAATTGGTGTGTTGTTGTATCATATTTATACTTCATAACTGATAGAAGTTTGGTTTCGTAAGGAACTTTGGTCTTTGCATCATGAACCCGATCATAGTATAGAGAAGAAAACGAAGTTTTGGGTTTGGAGTCAAAATACAAATAAACCAAGGAAAATTTTTGAAGTACAAATAATATTTTGTGTGGGTTTGAGGAATAATAATTAAGAATATAACAATATTTAAAAAAAATTGTAAATATAGCAAAACTATCGCTATAAACTTGTATCGTTGATAGAATTTGACAAATTTTACTATATTTATAAATCTTTTAAAATGATGTTATATACTTAATTATTTTGAATCTAATTGCTAAATTTGTTGCTATCCATTTGTTTTCCTAAATTTTCTCTCATCTATATAATATCAAAAATTACAAAGTCAAAATGAAAAAAAACCATCAAAATATATATACTAAGTGTATTAAGAGAGGAGGAGGAGAAGAAGTGTGGAAATCATAGTAATGATAATAGTAAGAAGAAATGTTGATGATAATTATAATAGTAATAATATATATTTAAAAATAATAATTTGTATGGAATAGAGTCGAGTCTACGTAATGTTGACCCATTTTACTAAAATAGTTTTGAAAGTATCCATTTTTCTCAAATTTCTTTAAAACCAACCCTTTTCAGATCTCACAATATTTGAAAGAACAGTAACTTACAATAATTTATACAATATATTTTGAACATAAAGAAAGATCACAAACAGATTCTACATCTTCCTCCTTTGACTTAATGTATGACTATGGCAACCACAGTATATAACTATCTTATTCTTGGGATTATTTGTTATTAAGAACTACTGTTTGCAGGTGAAAAATTCCTAACAAATATATTTTTAGACATTCCTCACTCTAATTTGCTGCAGAGTAAAATAATGTTGCTTCCTTTGGTACTTGTAATGATGACAATGATCTCATGCTTGGAAGCTGTTGGAACAAACAATAACAACAATCTCATGAATATGGTCATAAAAACTCAAACCTTTTTATCTCCATCATTCACCATGACACCTGGTTTAGTAATCGAGAAATTCTTCTACAATATCAACTTCCCAAAATCCCACATTGCCATAAAAAGCTTTCATGTTGAAGTTGTAGATGAATCAGGCAATCAAATCCCACTTCCACAAACTTACCTTCATCACTGGGTACTTGTGAGATATTACCAACACAAAAATGCAACAAACCCAACAATAAATACTAGCTATAACGAGCTTCAAGAACCAAACTTTATCATTGCTAGCAACAGTGGAGTCTGTGAACGGAACATTTTACCGGCCTACTACGCCATGGGATCCGAATCAAGAAAACTATCCACATTTCTTCCACACCCATATGGAATTGAAGTTGGGAATCCAAAAGAAATTCCCACAGATTATGAAGAGAGGTGGAGTCTCAATGTTCATGCCATTGATACAAGAGGAGCAGAGAACAAGTTGGGATGTATCGAGTGTCATTGCCATTTGTATAATATTACAAAAGATCGATCTGGAAGGCCATTAACGGAAGATTATAAAGGAGGTTTGAGATGTTGTTATGATAAAACAAAGTGTAGAGTGAATGTATTAAGTGATGGAGAAGATTTTCAAGAAAGGAATTTGTTTGTGAGATATAGAGTGAAGTGGGTGGATTGGAATGATTTTGTGATTCCTGTCAAAATTTATTTATTTGATGTTACTGATACTCCGAAGCCATTGTCAGACTCAACGGAAGCTTCTCAACAACATCATTGTCTGGTAAGTTAAACTCTATTAATTACTCCTTTTGATCACAAGTATTGTTTTAAATGCCTAAGATGTAATTAAATTTTGTGTTGGAATATACAACACAATAATAGATCTGATACTTGTGTTTGATTTATTAATTTTGTGTTAGAAAGTGAAAACTAACTGTAAGAGAAAAATTCATCACATTAAATCTAGCATTATTTAATATGAAAAGTGAAAACTAACTGTGTATATAAAGTATTGATTTCTATTCAGTTTGATGGGTTTTAAAATTTTCATTTTAAATAAAATCAAAGCATGCACAGCATCTCAACCAATCATAATAGAAAAATGATTTAGTTATGTATCTAATAGGGCTGTCTAAACTTTAAAATTGGAGTGTGTTATCGTTATTTGTATCCAATATCAATATAGTTGCTGTATTTTCTGTCTAATAATATGTATGTCCTTTGGACTTATAAATTATTATTTTTATATATAGTTTCATAGATGATGTTCTACATATATATATATATATAACCATTTATATTGTTTTCTTGTATGTATATATAATATATAGATTGAGTATGATGTAGAAGCAGAGTTTTGCTCCCTCAAAAATAAGCTTGATGATGATAAATGTAATGCTGTGAAAAAGTCGAAGGTAATGTTTCCATCAAGTGGGTATCTCATCTATGGAGTGGCTCACCAACACATTGGTGCAACTGGTGCAACATTTTACGGACAGGTAATATTAACCAATTATTATGTTTATATATTTGCTTTTGCATTCATTACCATAATTCGTTTCTAACTAGTTTTTTGTTTTTGAAAATGGAGCTTAAATAATTAGCTTTATGTTGTTATCAGGATGGAAGAGTTTTATGCTCTTCATCTCCAATTCATGGGAAAGAAAATGAGGAAGGATATGTGATTGGAATGACAACTTGTTATCCAAAGCCAGGTTCAATCAAGATCAACAAAGGAGAAATGGTAACTTTTGTATCCAATTATAGTTCCACACTGACCCACAGAGGAGTTATGGGTATCTTTCACATTATTGTTGCTGACAGAATATTCAAACCATCATCGACACTTTCGGAAGAAGTTGGCAATAACAACACCATCGTCATGTTATGATCTAAAAGCTTAGTTTGTACTGTTGTAGCTTTTTGAATAAGTGATCTATAGTATGAAGTAAATTAGTATTTGGTAAATCTACAGTTTTTAGATATTAAAAAGTGGACGTTTTACAACTGTTTACTATATATATAAATACTAGCTAGATTATAGATTATTGTATTTTGCTTAGAGTTCTATCAAAAAAACTAACCAGGCCTTTCAG ATGTTGCTTCCTTTGGTACTTGTAATGATGACAATGATCTCATGCTTGGAAGCTGTTGGAACAAACAATAACAACAATCTCATGAATATGGTCATAAAAACTCAAACCTTTTTATCTCCATCATTCACCATGACACCTGGTTTAGTAATCGAGAAATTCTTCTACAATATCAACTTCCCAAAATCCCACATTGCCATAAAAAGCTTTCATGTTGAAGTTGTAGATGAATCAGGCAATCAAATCCCACTTCCACAAACTTACCTTCATCACTGGGTACTTGTGAGATATTACCAACACAAAAATGCAACAAACCCAACAATAAATACTAGCTATAACGAGCTTCAAGAACCAAACTTTATCATTGCTAGCAACAGTGGAGTCTGTGAACGGAACATTTTACCGGCCTACTACGCCATGGGATCCGAATCAAGAAAACTATCCACATTTCTTCCACACCCATATGGAATTGAAGTTGGGAATCCAAAAGAAATTCCCACAGATTATGAAGAGAGGTGGAGTCTCAATGTTCATGCCATTGATACAAGAGGAGCAGAGAACAAGTTGGGATGTATCGAGTGTCATTGCCATTTGTATAATATTACAAAAGATCGATCTGGAAGGCCATTAACGGAAGATTATAAAGGAGGTTTGAGATGTTGTTATGATAAAACAAAGTGTAGAGTGAATGTATTAAGTGATGGAGAAGATTTTCAAGAAAGGAATTTGTTTGTGAGATATAGAGTGAAGTGGGTGGATTGGAATGATTTTGTGATTCCTGTCAAAATTTATTTATTTGATGTTACTGATACTCCGAAGCCATTGTCAGACTCAACGGAAGCTTCTCAACAACATCATTGTCTGATTGAGTATGATGTAGAAGCAGAGTTTTGCTCCCTCAAAAATAAGCTTGATGATGATAAATGTAATGCTGTGAAAAAGTCGAAGGTAATGTTTCCATCAAGTGGGTATCTCATCTATGGAGTGGCTCACCAACACATTGGTGCAACTGGTGCAACATTTTACGGACAGGATGGAAGAGTTTTATGCTCTTCATCTCCAATTCATGGGAAAGAAAATGAGGAAGGATATGTGATTGGAATGACAACTTGTTATCCAAAGCCAGGTTCAATCAAGATCAACAAAGGAGAAATGGTAACTTTTGTATCCAATTATAGTTCCACACTGACCCACAGAGGAGTTATGGGTATCTTTCACATTATTGTTGCTGACAGAATATTCAAACCATCATCGACACTTTCGGAAGAAGTTGGCAATAACAACACCATCGTCATGTTATGA ATGTTGCTTCCTTTGGTACTTGTAATGATGACAATGATCTCATGCTTGGAAGCTGTTGGAACAAACAATAACAACAATCTCATGAATATGGTCATAAAAACTCAAACCTTTTTATCTCCATCATTCACCATGACACCTGGTTTAGTAATCGAGAAATTCTTCTACAATATCAACTTCCCAAAATCCCACATTGCCATAAAAAGCTTTCATGTTGAAGTTGTAGATGAATCAGGCAATCAAATCCCACTTCCACAAACTTACCTTCATCACTGGGTACTTGTGAGATATTACCAACACAAAAATGCAACAAACCCAACAATAAATACTAGCTATAACGAGCTTCAAGAACCAAACTTTATCATTGCTAGCAACAGTGGAGTCTGTGAACGGAACATTTTACCGGCCTACTACGCCATGGGATCCGAATCAAGAAAACTATCCACATTTCTTCCACACCCATATGGAATTGAAGTTGGGAATCCAAAAGAAATTCCCACAGATTATGAAGAGAGGTGGAGTCTCAATGTTCATGCCATTGATACAAGAGGAGCAGAGAACAAGTTGGGATGTATCGAGTGTCATTGCCATTTGTATAATATTACAAAAGATCGATCTGGAAGGCCATTAACGGAAGATTATAAAGGAGGTTTGAGATGTTGTTATGATAAAACAAAGTGTAGAGTGAATGTATTAAGTGATGGAGAAGATTTTCAAGAAAGGAATTTGTTTGTGAGATATAGAGTGAAGTGGGTGGATTGGAATGATTTTGTGATTCCTGTCAAAATTTATTTATTTGATGTTACTGATACTCCGAAGCCATTGTCAGACTCAACGGAAGCTTCTCAACAACATCATTGTCTGATTGAGTATGATGTAGAAGCAGAGTTTTGCTCCCTCAAAAATAAGCTTGATGATGATAAATGTAATGCTGTGAAAAAGTCGAAGGTAATGTTTCCATCAAGTGGGTATCTCATCTATGGAGTGGCTCACCAACACATTGGTGCAACTGGTGCAACATTTTACGGACAGGATGGAAGAGTTTTATGCTCTTCATCTCCAATTCATGGGAAAGAAAATGAGGAAGGATATGTGATTGGAATGACAACTTGTTATCCAAAGCCAGGTTCAATCAAGATCAACAAAGGAGAAATGGTAACTTTTGTATCCAATTATAGTTCCACACTGACCCACAGAGGAGTTATGGGTATCTTTCACATTATTGTTGCTGACAGAATATTCAAACCATCATCGACACTTTCGGAAGAAGTTGGCAATAACAACACCATCGTCATGTTATGA MLLPLVLVMMTMISCLEAVGTNNNNNLMNMVIKTQTFLSPSFTMTPGLVIEKFFYNINFPKSHIAIKSFHVEVVDESGNQIPLPQTYLHHWVLVRYYQHKNATNPTINTSYNELQEPNFIIASNSGVCERNILPAYYAMGSESRKLSTFLPHPYGIEVGNPKEIPTDYEERWSLNVHAIDTRGAENKLGCIECHCHLYNITKDRSGRPLTEDYKGGLRCCYDKTKCRVNVLSDGEDFQERNLFVRYRVKWVDWNDFVIPVKIYLFDVTDTPKPLSDSTEASQQHHCLIEYDVEAEFCSLKNKLDDDKCNAVKKSKVMFPSSGYLIYGVAHQHIGATGATFYGQDGRVLCSSSPIHGKENEEGYVIGMTTCYPKPGSIKINKGEMVTFVSNYSSTLTHRGVMGIFHIIVADRIFKPSSTLSEEVGNNNTIVML
BLAST of CsaV3_1G004040 vs. NCBI nr
Match: KGN63844.1 (hypothetical protein Csa_1G024275 [Cucumis sativus]) HSP 1 Score: 894.8 bits (2311), Expect = 1.1e-256 Identity = 429/432 (99.31%), Postives = 429/432 (99.31%), Query Frame = 0
BLAST of CsaV3_1G004040 vs. NCBI nr
Match: XP_011648993.1 (PREDICTED: uncharacterized protein LOC101210584 [Cucumis sativus]) HSP 1 Score: 894.8 bits (2311), Expect = 1.1e-256 Identity = 429/432 (99.31%), Postives = 429/432 (99.31%), Query Frame = 0
BLAST of CsaV3_1G004040 vs. NCBI nr
Match: XP_008453438.1 (PREDICTED: uncharacterized protein LOC103494145 [Cucumis melo] >XP_008453439.1 PREDICTED: uncharacterized protein LOC103494145 [Cucumis melo] >XP_008453440.1 PREDICTED: uncharacterized protein LOC103494145 [Cucumis melo]) HSP 1 Score: 814.3 bits (2102), Expect = 2.0e-232 Identity = 392/432 (90.74%), Postives = 408/432 (94.44%), Query Frame = 0
BLAST of CsaV3_1G004040 vs. NCBI nr
Match: XP_008453443.1 (PREDICTED: uncharacterized protein LOC103494148 [Cucumis melo]) HSP 1 Score: 778.9 bits (2010), Expect = 9.2e-222 Identity = 376/433 (86.84%), Postives = 402/433 (92.84%), Query Frame = 0
BLAST of CsaV3_1G004040 vs. NCBI nr
Match: XP_011660342.1 (PREDICTED: uncharacterized protein LOC105436375 [Cucumis sativus]) HSP 1 Score: 757.7 bits (1955), Expect = 2.2e-215 Identity = 362/402 (90.05%), Postives = 375/402 (93.28%), Query Frame = 0
BLAST of CsaV3_1G004040 vs. TAIR10
Match: AT5G61820.1 (FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 370.9 bits (951), Expect = 1.0e-102 Identity = 185/434 (42.63%), Postives = 267/434 (61.52%), Query Frame = 0
BLAST of CsaV3_1G004040 vs. TrEMBL
Match: tr|A0A0A0LS56|A0A0A0LS56_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G024275 PE=4 SV=1) HSP 1 Score: 894.8 bits (2311), Expect = 7.6e-257 Identity = 429/432 (99.31%), Postives = 429/432 (99.31%), Query Frame = 0
BLAST of CsaV3_1G004040 vs. TrEMBL
Match: tr|A0A1S3BWB5|A0A1S3BWB5_CUCME (uncharacterized protein LOC103494145 OS=Cucumis melo OX=3656 GN=LOC103494145 PE=4 SV=1) HSP 1 Score: 814.3 bits (2102), Expect = 1.3e-232 Identity = 392/432 (90.74%), Postives = 408/432 (94.44%), Query Frame = 0
BLAST of CsaV3_1G004040 vs. TrEMBL
Match: tr|A0A1S3BXF3|A0A1S3BXF3_CUCME (uncharacterized protein LOC103494148 OS=Cucumis melo OX=3656 GN=LOC103494148 PE=4 SV=1) HSP 1 Score: 778.9 bits (2010), Expect = 6.1e-222 Identity = 376/433 (86.84%), Postives = 402/433 (92.84%), Query Frame = 0
BLAST of CsaV3_1G004040 vs. TrEMBL
Match: tr|A0A1S3BX23|A0A1S3BX23_CUCME (uncharacterized protein LOC103494146 OS=Cucumis melo OX=3656 GN=LOC103494146 PE=4 SV=1) HSP 1 Score: 568.5 bits (1464), Expect = 1.2e-158 Identity = 267/293 (91.13%), Postives = 277/293 (94.54%), Query Frame = 0
BLAST of CsaV3_1G004040 vs. TrEMBL
Match: tr|A0A0A0K2U1|A0A0A0K2U1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G069440 PE=4 SV=1) HSP 1 Score: 528.5 bits (1360), Expect = 1.4e-146 Identity = 250/418 (59.81%), Postives = 321/418 (76.79%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |