Carg15163 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGACCCCTGGTTCAGTGGTCGAGAGATTCTACTACAGCACCAACTTTCCCAAAGCCCATGTTGCCCTGAAGGGCTTCGACGTCGAAGTTGTAGACGACGCAGGCAACCCCGTCCCGCTCTTTGAAACATATTTACACCACTGGGGAATCTTCAGGTAGTTCTACTTAAACCTTGTGAACATTAATGAATATTGGACTTTCCATCCTAATTTTGTTTCTCGTTGTTAACAGGTATTATCAACGCCAAGATGCAAAAGATCCAAATACAAACGTTTCATTCAACTCAAATTAATGAACCAAATTTCTTGATTGTGAGTAACAATGGAGTGTGCCAAAAACATGTTTTTCCACAATTTTATGGGACAGGGGCTGATTCAATAAGAACATCCTCATTTCTTCCGAACCCATATGGAATTGAAGTTGGGAATGAAGTGGAAGTTCCTTTAGGGTATGAAGAAAAATGGGTATTAAATATCCATGCCATTGATACTCGGGGTGTGGAGGACAGACTGGGATGCATCGAGTGTCAACGCCATTTGTATAATGTTACGAAGGATGGGCTTGGGATGGCATTGGAAGTAGATTATAAAGGAGGTTTGAGATGTTGTTATGATAAAACTAAGTGTAAACTGAGGGAAAGCTATGAGGGAGAAGAAGAAAGGAGTTTGTATGTGAGATATACTGTGAAGTGGATGGATTGGGATGATGATCTTGTGATTCCCCTAAAGGTCTATATATTTGATGTCACTGATACTTGGAATCCATTGACAGGCAGCACTGGAGCTCCTGAAGAACACAATTGTCTAGTAAGTCCACTAATTCCCTCTCATATATAATTTCGAGATTGAGAGTCATACGTATCGGACCAAAGTGGACAATATTTACTAGCGGGTAGACTTAGACTGTTACAAATGGTGTTAGAGCCTAACAATGGGCGGTGTTGCCAAACAATGTATTTTAAGACTGTGAGGCTGACAGCCATACATAATAACAGACCAAAGTAGACAATATTTGCTAGCAGTGGACTTTGGCTGTTACAATATGGTATTAGGAGCAAACATTGGACAGTGTGCCAACAAGGATGTTGGACCTCCAAGAGGGTGGCATCAGTTGGAGAGGAGGGGAACAAACTATTGCTTATAACATTTTAAAACTGTGAAGCTGACGGTCATACATAATAGACCGAAGTAGATAATATTTGCTAGCGGTGGACTTTGGCTGTTACAAATGGTATTAGGGGCACACATTGGACGGTGGGCCAACAAGGATGTTGGGTCTCTAAGAGGGTGGATTGTGAGATCCACATCAGTTGGAGAGGAGGGGAACAAACTATTCCTTATAAGAGTGTGGAAACTCTTCCTAGTGAACACATTTCAAAACTGTGAGGTTGACATCCATACGTAACGGGTCAAAACAAACAATTGTGGACTTGAGCTGTTACAAATGGTATCAGAGCCAAACATGGGGTTGTGTGCCAGTGAGGACGTTGGACCCTCAAGAGGGTGGATTGTGAGATCTCACATCAGTTTGAGAGGGAAACGAAACATTTCTTATAAGGGTGTGGAAACCTCTTCCTAGTAGACGCATTTTAAACCGTAAGGCAAACAACAATATGTAACGGGCCAAAACGGACTATTTGGTAGTGGTGGACTTGAGCTGTTACTGAAATGTTGATGATTTAGTGAGATTAATATATAAGGCATGCTCGATAAAGTTTCCGTTTCTTTCATTCAAGCAGAATCGAAAGTATCCGTGTTACTGGGTAGCTTCATTTTATCGTTGTTTCTATTTTCAAAAAACTAGTTATCAAACGAGACCTTAAACCTATCTATTATTTTCGGGTTTTTGTATAGGTGGAGTATAATGTAGAGGCTTGCTCCCCTACAAACAAGCCTGATAATGAATGTAAAGCTACCAAAATGGTGAGGCTAATCTCTCCCAGCAGTGGCTATCTCATATATGGGATGGCTCATCTACATATTGGTACCATTGGCTCAATGCTTTATGGAGAGGTAATCTTTTCGTGTCGATTCTTTATGGTTATGTCGTATACGCCTCTAAACCTGAAAGCAAAGGGACTAAACTTAACGAAAATGAACATAACGTGTATCAGGACGGAAGGCTGTTATGTTCTTCGTCTCCGATATATGGACATGGAAGTGAAGTAGGGAATGAAGATGGCTATGTGGTTGGAATGTCAACTTGTTATCCACAGCCAGGCTCTGTCAAAATGAATAGAGGAGAAATGTTGAGTCTTATATCCAAATATGAGCCTGCACAGAACCACGTTGGGGTTATGGGCCTCTTTCATATAATGGTTGCACAAAGGCTACCAAACTCATTGCTTCACATGGTACCATTCAAGCATGATGATGATACCACCTTGTAA ATGACCCCTGGTTCAGTGGTCGAGAGATTCTACTACAGCACCAACTTTCCCAAAGCCCATGTTGCCCTGAAGGGCTTCGACGTCGAAGTTGTAGACGACGCAGGCAACCCCGTCCCGCTCTTTGAAACATATTTACACCACTGGGGAATCTTCAGTAACAATGGAGTGTGCCAAAAACATGTTTTTCCACAATTTTATGGGACAGGGGCTGATTCAATAAGAACATCCTCATTTCTTCCGAACCCATATGGAATTGAAGTTGGGAATGAAGTGGAAGTTCCTTTAGGGTATGAAGAAAAATGGGTATTAAATATCCATGCCATTGATACTCGGGGTGTGGAGGACAGACTGGGATGCATCGAGTGTCAACGCCATTTGTATAATGTTACGAAGGATGGGCTTGGGATGGCATTGGAAGTAGATTATAAAGGAGGTTTGAGATGTTGTTATGATAAAACTAAGTGTAAACTGAGGGAAAGCTATGAGGGAGAAGAAGAAAGGAGTTTGTATGTGAGATATACTGTGAAGTGGATGGATTGGGATGATGATCTTGTGATTCCCCTAAAGGTCTATATATTTGATGTCACTGATACTTGGAATCCATTGACAGGCAGCACTGGAGCTCCTGAAGAACACAATTGTCTAGTGGAGTATAATGTAGAGGCTTGCTCCCCTACAAACAAGCCTGATAATGAATGTAAAGCTACCAAAATGGTGAGGCTAATCTCTCCCAGCAGTGGCTATCTCATATATGGGATGGCTCATCTACATATTGGTACCATTGGCTCAATGCTTTATGGAGAGGACGGAAGGCTGTTATGTTCTTCGTCTCCGATATATGGACATGGAAGTGAAGTAGGGAATGAAGATGGCTATGTGGTTGGAATGTCAACTTGTTATCCACAGCCAGGCTCTGTCAAAATGAATAGAGGAGAAATGTTGAGTCTTATATCCAAATATGAGCCTGCACAGAACCACGTTGGGGTTATGGGCCTCTTTCATATAATGGTTGCACAAAGGCTACCAAACTCATTGCTTCACATGGTACCATTCAAGCATGATGATGATACCACCTTGTAA ATGACCCCTGGTTCAGTGGTCGAGAGATTCTACTACAGCACCAACTTTCCCAAAGCCCATGTTGCCCTGAAGGGCTTCGACGTCGAAGTTGTAGACGACGCAGGCAACCCCGTCCCGCTCTTTGAAACATATTTACACCACTGGGGAATCTTCAGTAACAATGGAGTGTGCCAAAAACATGTTTTTCCACAATTTTATGGGACAGGGGCTGATTCAATAAGAACATCCTCATTTCTTCCGAACCCATATGGAATTGAAGTTGGGAATGAAGTGGAAGTTCCTTTAGGGTATGAAGAAAAATGGGTATTAAATATCCATGCCATTGATACTCGGGGTGTGGAGGACAGACTGGGATGCATCGAGTGTCAACGCCATTTGTATAATGTTACGAAGGATGGGCTTGGGATGGCATTGGAAGTAGATTATAAAGGAGGTTTGAGATGTTGTTATGATAAAACTAAGTGTAAACTGAGGGAAAGCTATGAGGGAGAAGAAGAAAGGAGTTTGTATGTGAGATATACTGTGAAGTGGATGGATTGGGATGATGATCTTGTGATTCCCCTAAAGGTCTATATATTTGATGTCACTGATACTTGGAATCCATTGACAGGCAGCACTGGAGCTCCTGAAGAACACAATTGTCTAGTGGAGTATAATGTAGAGGCTTGCTCCCCTACAAACAAGCCTGATAATGAATGTAAAGCTACCAAAATGGTGAGGCTAATCTCTCCCAGCAGTGGCTATCTCATATATGGGATGGCTCATCTACATATTGGTACCATTGGCTCAATGCTTTATGGAGAGGACGGAAGGCTGTTATGTTCTTCGTCTCCGATATATGGACATGGAAGTGAAGTAGGGAATGAAGATGGCTATGTGGTTGGAATGTCAACTTGTTATCCACAGCCAGGCTCTGTCAAAATGAATAGAGGAGAAATGTTGAGTCTTATATCCAAATATGAGCCTGCACAGAACCACGTTGGGGTTATGGGCCTCTTTCATATAATGGTTGCACAAAGGCTACCAAACTCATTGCTTCACATGGTACCATTCAAGCATGATGATGATACCACCTTGTAA MTPGSVVERFYYSTNFPKAHVALKGFDVEVVDDAGNPVPLFETYLHHWGIFSNNGVCQKHVFPQFYGTGADSIRTSSFLPNPYGIEVGNEVEVPLGYEEKWVLNIHAIDTRGVEDRLGCIECQRHLYNVTKDGLGMALEVDYKGGLRCCYDKTKCKLRESYEGEEERSLYVRYTVKWMDWDDDLVIPLKVYIFDVTDTWNPLTGSTGAPEEHNCLVEYNVEACSPTNKPDNECKATKMVRLISPSSGYLIYGMAHLHIGTIGSMLYGEDGRLLCSSSPIYGHGSEVGNEDGYVVGMSTCYPQPGSVKMNRGEMLSLISKYEPAQNHVGVMGLFHIMVAQRLPNSLLHMVPFKHDDDTTL
BLAST of Carg15163 vs. NCBI nr
Match: XP_022921941.1 (uncharacterized protein LOC111430047 [Cucurbita moschata]) HSP 1 Score: 731.1 bits (1886), Expect = 1.8e-207 Identity = 347/387 (89.66%), Postives = 351/387 (90.70%), Query Frame = 0
BLAST of Carg15163 vs. NCBI nr
Match: XP_023515680.1 (uncharacterized protein LOC111779774 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 730.7 bits (1885), Expect = 2.4e-207 Identity = 345/387 (89.15%), Postives = 352/387 (90.96%), Query Frame = 0
BLAST of Carg15163 vs. NCBI nr
Match: XP_022988529.1 (uncharacterized protein LOC111485742 [Cucurbita maxima]) HSP 1 Score: 714.9 bits (1844), Expect = 1.4e-202 Identity = 339/387 (87.60%), Postives = 347/387 (89.66%), Query Frame = 0
BLAST of Carg15163 vs. NCBI nr
Match: KGN43818.1 (hypothetical protein Csa_7G069440 [Cucumis sativus]) HSP 1 Score: 589.3 bits (1518), Expect = 8.6e-165 Identity = 269/384 (70.05%), Postives = 314/384 (81.77%), Query Frame = 0
BLAST of Carg15163 vs. NCBI nr
Match: XP_011658854.1 (PREDICTED: uncharacterized protein LOC101210001 [Cucumis sativus]) HSP 1 Score: 588.2 bits (1515), Expect = 1.9e-164 Identity = 267/384 (69.53%), Postives = 312/384 (81.25%), Query Frame = 0
BLAST of Carg15163 vs. TAIR10
Match: AT5G61820.1 (FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 372.9 bits (956), Expect = 2.3e-103 Identity = 184/382 (48.17%), Postives = 238/382 (62.30%), Query Frame = 0
BLAST of Carg15163 vs. TrEMBL
Match: tr|A0A0A0K2U1|A0A0A0K2U1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G069440 PE=4 SV=1) HSP 1 Score: 589.3 bits (1518), Expect = 5.7e-165 Identity = 269/384 (70.05%), Postives = 314/384 (81.77%), Query Frame = 0
BLAST of Carg15163 vs. TrEMBL
Match: tr|A0A1S3C023|A0A1S3C023_CUCME (uncharacterized protein LOC103495342 OS=Cucumis melo OX=3656 GN=LOC103495342 PE=4 SV=1) HSP 1 Score: 586.3 bits (1510), Expect = 4.8e-164 Identity = 272/385 (70.65%), Postives = 312/385 (81.04%), Query Frame = 0
BLAST of Carg15163 vs. TrEMBL
Match: tr|A0A1S3BVP7|A0A1S3BVP7_CUCME (uncharacterized protein LOC103494150 OS=Cucumis melo OX=3656 GN=LOC103494150 PE=4 SV=1) HSP 1 Score: 495.7 bits (1275), Expect = 8.5e-137 Identity = 225/376 (59.84%), Postives = 284/376 (75.53%), Query Frame = 0
BLAST of Carg15163 vs. TrEMBL
Match: tr|A0A1S3BWB5|A0A1S3BWB5_CUCME (uncharacterized protein LOC103494145 OS=Cucumis melo OX=3656 GN=LOC103494145 PE=4 SV=1) HSP 1 Score: 449.9 bits (1156), Expect = 5.4e-123 Identity = 209/374 (55.88%), Postives = 270/374 (72.19%), Query Frame = 0
BLAST of Carg15163 vs. TrEMBL
Match: tr|A0A0A0LS56|A0A0A0LS56_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G024275 PE=4 SV=1) HSP 1 Score: 448.4 bits (1152), Expect = 1.6e-122 Identity = 210/381 (55.12%), Postives = 278/381 (72.97%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |