CsaV3_1G003750 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G003750
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	AT-rich interactive domain protein
Location	chr1 : 2337216 .. 2340976 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCTGACCATAACCAACGGCGGTGCCACCGTCGGCACCAGTGGGGGAATTCTCTACAGAACCTTCACAAGAACTCCTTCTAACTATTTCCTTTTCCGTCGCAACGCGCTTTTTCATCCCTCAAAAGAAGCCCGCACCCTCCATCTCGTTCAAGCCAAGAAATCCTCCTTCCGAACAGGCCGATTCGACAGTAAGAACCGGAAGAGCTCGACGACAATCAAGGAACAGGAAGAAGAAGAAGAACGAAATCGGACGGCCGGGGTTGAAATGGGCAGTCCCGTCGTTGAAAATGCCGGTGTAGTGTTTGACGTGGATGAGAATTTGCCGCAATTGCCTGGGCTTCAGCCGGATTTCTGGGAGGGTCCGCAGTGGGATGCCTTTGGCTTCTTCCTAGAGTACTTGTGGGCTTTTGGAATCGTTTTCGCGGTATAATTTCACTAGTTTTTCTGTTTTCTGTTTTCTGTTGTATTCAGATTAATTACTTAATTCCAGCAATCTAGTTGCTTAACTTGAAATGAGAATATATTAACCCATAACCCAAAATTGTAGATGTTGAATTTCAATCTCAAAGTTCTTATTTGTTTCTTGATCATAAACAGAACAGAATTATGATATTTAACATTAGCCAGGTGTTTCCTTTTGAAATTTTTTTCTAAAAAGGATAATTATTTTACGTTCGGTAGTCCTTTTGTAAATGAGTGCTTCACTAATTCATTCATCATTATAATAGATTATTGCATGTGGAATTGCTGTCACTACATATAATGAAGGAGCAACTGATTTCAAGGAGACACCTGCATATAAAGAATCAGTTCAAACTAGAGAGATTTTAGAACCAGAGGCATCAAACCCAGATGTGTTTGAATCTAATCCAACTGAGGTGGCTCCAAGTTTGGAATGATGTTGATGCTTACATATCAAAAACAGATTACACATCTTGGATACATTATCATCCTCCCAAGCAGTTAAAGAAGTGAAAAAGAAAACAAAGGATACTATGTGAATTTGTAATGGCATATTTTTCTAGGTATGTTATGACAACTTTATTCTATTGTATCTAGTTAAGATTTTGATCTTATGTCTTAGTTTTCTTATCAACATGTTGTTTTTTTCTTTTAGGTCTTTCTTCTGTAGACATAGATTGCTGTCCTTAGACTAACTGTTTTAGTGAGATTAGGGAATAAGGCATATCTAGCTGCTAAGTGGATCAAATTGGTCGGGTTCAAACGTTAAAATGCTAAAGAAACAACTATATTTTGTTAAGAGCGTATTTAACTAAAACAATCTAGTAGAAGTCTAATAAAGAAGAACATCACTGCTAGCTGCTGAAGCAACCCCATACATCATATGATAATTTATTTCAATAAAGTACTACTAGAAACAGAAAAGTGCTTATTGTTATCACTACTGTGAGCTGAATTCCTCCCTTTAATTTGAAACTAGCACTGATCTTGCCCAATCCTAAACCCACAATGCTAGGTTTTGGTGTTGGTTGAGTCATTGGAGAAGCTGAAATTTACAAAAGTAGAGTCAGATTGTTACATATTCGAAGGCTGTATTAGAAGTAGAACTGAACCAAAAACTATATCGTCTGGATGAATATCTGAAGTATACCTAGAACCGTAGCATTGCTAATTGTGGAGTTGATGTGTACTCTAGGAGGAACATGAGAACTGGGTGGACTAGGTGGCCCAAGGAGAGCTTCAAAGAACCGTTCAAAGAATTATAAATGTCAAACCGTGGGATCAGATTGTAGAGAGAAGTAGAGAGTAGAAAAAATATAACATCTTTTAGGATGACAGGATTATAGTTTTACCTGAACAAGTGGAGATGTTAACTTGAAGGCTGCAAATATCAGGCAGCTGGAGGGCTCTAGTAGTGTTGATAGGGAAAGAGCTTAAGTTAGTGCCATTCAGCAAGAGGCAAAGGCAGTTAGGGACAACGTTGTAGAGTTGTTTCAGGTTATCACAGCATCCCATAGGTGGTGTTGGTGTTACACCTTGCACAAAAGGTGCACAAGAAGCCAATGGAAGAATACTCGTCGTGCATTGAGCTATGGTGGGAGTTGATATGGTTGGACCTTGTGATATGGTGATCGGTAGAACGTGCAGGAGAAACAGCAGACTTAGGTATGAGATAGCTTGTTGAGGAAGGGGGAGATGTGGAAGAGATGCCATGGTTGCAAAGTCAATAAAGCTTTCTTTAGCTTTTACAGTGTAGAAATAGAGGGAAAGTTCATTGTTTAAGTGAGTTGAAACATGCTGTCTGTGTGCCATTCCACACACTTCTTGTTCTTCCCTCTCCAATACTTGTGAGTGCCAAAGCAAAACATGCTTGGAGTGAAAGACTCATGAGTTAAGGGCAAATAACTTCAACTTTCTAAGTTTTTGTTTTTGTTTTTTCTTGCCAAACTCTAAGCTCACTGTGAGATTCAACTTTTTCTTCATAATCGAATTAAGGCTATCAATACCACTTCTTTCAAGTGGTGGATCCTTGATTTTATGTCAAGTAAGACACAAGTTTATATGCCTGAAATTTAAAATGGGTCAATGGCATACTTAAATTAAGTAATAATAATTAAAAAAATCACAAAATATTTACACAAATGACAAAATATCGCTTAAGTCCAAAAATGATTTACACAAACAATTTTACTAGTGTGCAAAGGTTTTGCCAAAATTTTCATTTTTGTCAATTTCTCTTAAACTTCAAACATACTAAAGTCAATAATTTTGGGTTTATGTTTAATTTGGTTAAAAACTTAAAAATGAATTTAAAAATATGCTTAATAAAATTTTCAATAAAATTGAAAAATACTAAAGAGTAGGGGCAGAGTATTGTGTTTTGTGGACTCTACTTATTCTATATTTTCTTAACTTTATAAACCAATTAAACTCAAATGGAAAGTTATTGAATCTGATATATGAGTAAATTACAATTTCAATTTAACCATCGGTTTAAAAAATAACAATGTTTGACACCTTACTCGAAAACAATTTTAAGAACAGGGAGATAAACTAAAGAGATAAATTCAAAAAACACAAGGTTTAGTAATTCAATTTGATAATATGTTATTTACGTTTGGGAGACAATGTGTGCAAGAAAAATACTTTTACTAATATGAAATTAAGCAATTAGAACGATGTAATAGCTCTGCTCCATGAATAATCACTGTGATTATATTATTAAGCTAAATATGAGAGTTACTCAGAACTATAATCTTTCCATCTCACAGCGAAATTGAAATACAACAAACAACATTCGGACACCACCACCACAGAAGTTGAGAAACTTCAATCAAAATACTCAAAATCAGAAGCAGTAGCAAGTAGGCAAGACAAGAACTTATTCATTATTCAAAATCTGGAGCATAAATAAGCAAAATATTCAGAGGATCACAACTAGCAAGAGGATTGTTACAACAATATACTCAAAGGAGCTTAAAACAAAGATAGTGAATACCAAAACTGTAGCAATTGAAAGAAAGAAAGAAAAAAAGAAACGTAGATTTTGGAGGTATATGATTGAGATATTAGAATTGAGATTGAATGGCCCAACGTTGGAGTTGATATTGCTATCAAATGGTAGCCACGTGACCCACATGCTCCCAAAATGGCATAAAATGAAGTAGTGGCTCAAAAGCTTCTTTCTCTTAATCCCACAACACCAACTATTCCTTTCCACTTCATAATAGCATTTGTTTGGGGTAAAAACTATTTTAATCTTGATAAAAGAAAAGTAAACAATGCATTTTTTTT

mRNA sequence

ATGCCTCTGACCATAACCAACGGCGGTGCCACCGTCGGCACCAGTGGGGGAATTCTCTACAGAACCTTCACAAGAACTCCTTCTAACTATTTCCTTTTCCGTCGCAACGCGCTTTTTCATCCCTCAAAAGAAGCCCGCACCCTCCATCTCGTTCAAGCCAAGAAATCCTCCTTCCGAACAGGCCGATTCGACAGTAAGAACCGGAAGAGCTCGACGACAATCAAGGAACAGGAAGAAGAAGAAGAACGAAATCGGACGGCCGGGGTTGAAATGGGCAGTCCCGTCGTTGAAAATGCCGGTGTAGTGTTTGACGTGGATGAGAATTTGCCGCAATTGCCTGGGCTTCAGCCGGATTTCTGGGAGGGTCCGCAGTGGGATGCCTTTGGCTTCTTCCTAGAGTACTTGTGGGCTTTTGGAATCGTTTTCGCGATTATTGCATGTGGAATTGCTGTCACTACATATAATGAAGGAGCAACTGATTTCAAGGAGACACCTGCATATAAAGAATCAGTTCAAACTAGAGAGATTTTAGAACCAGAGGCATCAAACCCAGATGTGTTTGAATCTAATCCAACTGAGGTGGCTCCAAGTTTGGAATGA

Coding sequence (CDS)

ATGCCTCTGACCATAACCAACGGCGGTGCCACCGTCGGCACCAGTGGGGGAATTCTCTACAGAACCTTCACAAGAACTCCTTCTAACTATTTCCTTTTCCGTCGCAACGCGCTTTTTCATCCCTCAAAAGAAGCCCGCACCCTCCATCTCGTTCAAGCCAAGAAATCCTCCTTCCGAACAGGCCGATTCGACAGTAAGAACCGGAAGAGCTCGACGACAATCAAGGAACAGGAAGAAGAAGAAGAACGAAATCGGACGGCCGGGGTTGAAATGGGCAGTCCCGTCGTTGAAAATGCCGGTGTAGTGTTTGACGTGGATGAGAATTTGCCGCAATTGCCTGGGCTTCAGCCGGATTTCTGGGAGGGTCCGCAGTGGGATGCCTTTGGCTTCTTCCTAGAGTACTTGTGGGCTTTTGGAATCGTTTTCGCGATTATTGCATGTGGAATTGCTGTCACTACATATAATGAAGGAGCAACTGATTTCAAGGAGACACCTGCATATAAAGAATCAGTTCAAACTAGAGAGATTTTAGAACCAGAGGCATCAAACCCAGATGTGTTTGAATCTAATCCAACTGAGGTGGCTCCAAGTTTGGAATGA

Protein sequence

MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRTGRFDSKNRKSSTTIKEQEEEEERNRTAGVEMGSPVVENAGVVFDVDENLPQLPGLQPDFWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPEASNPDVFESNPTEVAPSLE

Homology

[Close]

BLAST of CsaV3_1G003750 vs. NCBI nr
Match: XP_004138240.1 (PREDICTED: uncharacterized protein LOC101218989 [Cucumis sativus] >KGN63813.1 hypothetical protein Csa_1G022520 [Cucumis sativus])

HSP 1 Score: 364.8 bits (935), Expect = 1.9e-97
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 1   MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRT 60
           MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRT
Sbjct: 1   MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRT 60

Query: 61  GRFDSKNRXXXXXXXXXXXXXXXXRTAGVEMGSPVVENAGVVFDVDENLPQLPGLQPDFW 120
           GRFDSKNRXXXXXXXXXXXXXXXXRTAGVEMGSPVVENAGVVFDVDENLPQLPGLQPDFW
Sbjct: 61  GRFDSKNRXXXXXXXXXXXXXXXXRTAGVEMGSPVVENAGVVFDVDENLPQLPGLQPDFW 120

Query: 121 EGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPE 180
           EGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPE
Sbjct: 121 EGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPE 180

Query: 181 ASNPDVFESNPTEVAPSLE 200
           ASNPDVFESNPTEVAPSLE
Sbjct: 181 ASNPDVFESNPTEVAPSLE 199

[Close]

BLAST of CsaV3_1G003750 vs. NCBI nr
Match: XP_008453388.1 (PREDICTED: uncharacterized protein LOC103494120 [Cucumis melo])

HSP 1 Score: 346.3 bits (887), Expect = 7.0e-92
Identity = 191/202 (94.55%), Postives = 197/202 (97.52%), Query Frame = 0


Query: 1   MPLTITNGGATVGTSGGILYRTFTRT-PSNYFLFRRNALFHPSKEARTLHLVQAKKSSFR 60
           MPLTITNGGAT GT+GGILYRTFTRT PSNYFLFRRNALFHPSKEARTLH+VQAKKSSFR
Sbjct: 1   MPLTITNGGATAGTTGGILYRTFTRTPPSNYFLFRRNALFHPSKEARTLHVVQAKKSSFR 60

Query: 61  TGRFDSKNR--XXXXXXXXXXXXXXXXRTAGVEMGSPVVENAGVVFDVDENLPQLPGLQP 120
           TGRFDSKNR  XXXXXXXXXXXXXXXXRTAG+EMGSP+VENAGVVFDVDENLP+LPGLQP
Sbjct: 61  TGRFDSKNRXXXXXXXXXXXXXXXXXXRTAGIEMGSPIVENAGVVFDVDENLPELPGLQP 120

Query: 121 DFWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREIL 180
           DFWEGPQWDA GFFLEYLWAFGIVFA+IACGIAVTTYNEGATDFKETPAYKESVQTREIL
Sbjct: 121 DFWEGPQWDALGFFLEYLWAFGIVFALIACGIAVTTYNEGATDFKETPAYKESVQTREIL 180

Query: 181 EPEASNPDVFESNPTEVAPSLE 200
           EPEASNPDVFESNPTEVAPSLE
Sbjct: 181 EPEASNPDVFESNPTEVAPSLE 202

[Close]

BLAST of CsaV3_1G003750 vs. NCBI nr
Match: XP_022134616.1 (uncharacterized protein LOC111006843 [Momordica charantia])

HSP 1 Score: 291.6 bits (745), Expect = 2.1e-75
Identity = 167/201 (83.08%), Postives = 177/201 (88.06%), Query Frame = 0


Query: 1   MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRT 60
           M LTITNGGA  G+ GGILYRT T+ PSN FL RRNALF PS EARTLH+VQAKKSSFRT
Sbjct: 1   MALTITNGGAAGGSGGGILYRTSTKIPSNQFLLRRNALFPPSNEARTLHVVQAKKSSFRT 60

Query: 61  GRFDSK-NRXXXXXXXXXXXXXXXXRTAGVEMGSPVVENAGVVFDVDENLPQLPGLQPDF 120
           GRFDSK   XXXXXXXXXXXXXXXXR A +E   P VENAGV FDVDENLP+LPGLQPDF
Sbjct: 61  GRFDSKXXXXXXXXXXXXXXXXXXXRMAEIERDGPNVENAGVAFDVDENLPELPGLQPDF 120

Query: 121 WEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREIL-E 180
           WEGP+WD  GFFLEYLWAFGI FA+IACGIAVTTYNEGATDFK+TPAYKESVQT+E+L E
Sbjct: 121 WEGPRWDPLGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQELLEE 180

Query: 181 PEASNPDVFESNPTEVAPSLE 200
           PEASNPDVFESNPTEVAPSLE
Sbjct: 181 PEASNPDVFESNPTEVAPSLE 201

[Close]

BLAST of CsaV3_1G003750 vs. NCBI nr
Match: XP_023515371.1 (uncharacterized protein LOC111779544 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 290.8 bits (743), Expect = 3.5e-75
Identity = 165/200 (82.50%), Postives = 172/200 (86.00%), Query Frame = 0


Query: 1   MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRT 60
           M LTITNGGA  GT GGILYRT TRTPSN FLFRRNALF PSKEARTLH+V +KKSSFR 
Sbjct: 1   MALTITNGGAACGTGGGILYRTSTRTPSNQFLFRRNALFSPSKEARTLHVVHSKKSSFRI 60

Query: 61  GRFDSKNRXXXXXXXXXXXXXXXXRTAGVEMGSPVVENAGVVFDVDENLPQLPGLQPDFW 120
           GR DSKNR  XXXXXXXXXXXXXX     E    + ENAGV FDVDENLP+LPGLQPDFW
Sbjct: 61  GRIDSKNRRSXXXXXXXXXXXXXXXXXMAE----IAENAGVAFDVDENLPELPGLQPDFW 120

Query: 121 EGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREIL-EP 180
           EG QWD  GFFLEYLWAFGI FA+IACGIAVTTYNEGATDFK+TPAYKESVQT+EIL EP
Sbjct: 121 EGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEP 180

Query: 181 EASNPDVFESNPTEVAPSLE 200
           EASNPDVFESNPTEVAPSLE
Sbjct: 181 EASNPDVFESNPTEVAPSLE 196

[Close]

BLAST of CsaV3_1G003750 vs. NCBI nr
Match: XP_022987248.1 (uncharacterized protein LOC111484859 [Cucurbita maxima])

HSP 1 Score: 286.2 bits (731), Expect = 8.6e-74
Identity = 163/200 (81.50%), Postives = 170/200 (85.00%), Query Frame = 0


Query: 1   MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRT 60
           M LTITNGGAT GT GGILYRT TRTPSN FLFRRNALF PSKEARTLH+V +KKSSFR 
Sbjct: 1   MALTITNGGATCGTGGGILYRTSTRTPSNQFLFRRNALFSPSKEARTLHVVHSKKSSFRI 60

Query: 61  GRFDSKNRXXXXXXXXXXXXXXXXRTAGVEMGSPVVENAGVVFDVDENLPQLPGLQPDFW 120
           GR DSK    XXXXXXXXXXXXXX          + ENAGV FDVDENLP+LPGLQPDFW
Sbjct: 61  GRIDSK----XXXXXXXXXXXXXXXXXXXXXXXXIAENAGVAFDVDENLPELPGLQPDFW 120

Query: 121 EGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREIL-EP 180
           EG QWD  GFFLEYLWAFGI FA+IACGIAVTTYNEGATDFK+TPAYKESVQT+EIL EP
Sbjct: 121 EGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEP 180

Query: 181 EASNPDVFESNPTEVAPSLE 200
           EASNPDVFESNPTEVAPSLE
Sbjct: 181 EASNPDVFESNPTEVAPSLE 196

[Close]

BLAST of CsaV3_1G003750 vs. TAIR10
Match: AT1G73885.1 (unknown protein)

HSP 1 Score: 125.9 bits (315), Expect = 2.7e-29
Identity = 60/92 (65.22%), Postives = 78/92 (84.78%), Query Frame = 0


Query: 109 LPQLPGLQPDFWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYK 168
           +  LPGL+PD +EG +WD  GFF++YLWAFGI+FA+I+ G+A  TYNEGATDFKETP YK
Sbjct: 88  IKDLPGLEPDPFEGEKWDGLGFFVQYLWAFGILFALISGGLAAGTYNEGATDFKETPVYK 147

Query: 169 ESVQTREIL-EPEASN-PDVFESNPTEVAPSL 199
           E++Q+R++L E E+SN  DVFESNPTEVAP++
Sbjct: 148 EAIQSRDLLDEAESSNSEDVFESNPTEVAPTI 179

[Close]

BLAST of CsaV3_1G003750 vs. TrEMBL
Match: tr|A0A0A0LPS1|A0A0A0LPS1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G022520 PE=4 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 1.3e-97
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 1   MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRT 60
           MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRT
Sbjct: 1   MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRT 60

Query: 61  GRFDSKNRXXXXXXXXXXXXXXXXRTAGVEMGSPVVENAGVVFDVDENLPQLPGLQPDFW 120
           GRFDSKNRXXXXXXXXXXXXXXXXRTAGVEMGSPVVENAGVVFDVDENLPQLPGLQPDFW
Sbjct: 61  GRFDSKNRXXXXXXXXXXXXXXXXRTAGVEMGSPVVENAGVVFDVDENLPQLPGLQPDFW 120

Query: 121 EGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPE 180
           EGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPE
Sbjct: 121 EGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREILEPE 180

Query: 181 ASNPDVFESNPTEVAPSLE 200
           ASNPDVFESNPTEVAPSLE
Sbjct: 181 ASNPDVFESNPTEVAPSLE 199

[Close]

BLAST of CsaV3_1G003750 vs. TrEMBL
Match: tr|A0A1S3BW57|A0A1S3BW57_CUCME (uncharacterized protein LOC103494120 OS=Cucumis melo OX=3656 GN=LOC103494120 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 4.7e-92
Identity = 191/202 (94.55%), Postives = 197/202 (97.52%), Query Frame = 0


Query: 1   MPLTITNGGATVGTSGGILYRTFTRT-PSNYFLFRRNALFHPSKEARTLHLVQAKKSSFR 60
           MPLTITNGGAT GT+GGILYRTFTRT PSNYFLFRRNALFHPSKEARTLH+VQAKKSSFR
Sbjct: 1   MPLTITNGGATAGTTGGILYRTFTRTPPSNYFLFRRNALFHPSKEARTLHVVQAKKSSFR 60

Query: 61  TGRFDSKNR--XXXXXXXXXXXXXXXXRTAGVEMGSPVVENAGVVFDVDENLPQLPGLQP 120
           TGRFDSKNR  XXXXXXXXXXXXXXXXRTAG+EMGSP+VENAGVVFDVDENLP+LPGLQP
Sbjct: 61  TGRFDSKNRXXXXXXXXXXXXXXXXXXRTAGIEMGSPIVENAGVVFDVDENLPELPGLQP 120

Query: 121 DFWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREIL 180
           DFWEGPQWDA GFFLEYLWAFGIVFA+IACGIAVTTYNEGATDFKETPAYKESVQTREIL
Sbjct: 121 DFWEGPQWDALGFFLEYLWAFGIVFALIACGIAVTTYNEGATDFKETPAYKESVQTREIL 180

Query: 181 EPEASNPDVFESNPTEVAPSLE 200
           EPEASNPDVFESNPTEVAPSLE
Sbjct: 181 EPEASNPDVFESNPTEVAPSLE 202

[Close]

BLAST of CsaV3_1G003750 vs. TrEMBL
Match: tr|A0A2N9EF76|A0A2N9EF76_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS1166 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 8.3e-49
Identity = 127/205 (61.95%), Postives = 146/205 (71.22%), Query Frame = 0


Query: 1   MPLTITNGGATVGTSGGILYRTFTRT-PSNYFLFRRNALFHP--SKEARTLHLVQAKKSS 60
           M LTI NGG   G  GGILY   T+  P  +   RR+ L  P  ++   TLH+V AK+ S
Sbjct: 1   MALTIANGGGGSGGRGGILYNNPTKQYPYTHLPIRRHVLIFPLSTRTTTTLHMVSAKRFS 60

Query: 61  FRTGRFDSKNRXXXXXXXXXXXXXXXXRTAGVEMGSPV-VENAGVVFDVD-ENLPQLPGL 120
            RTGR D KNR   XXXXXXXXXXXXX    V   S    E+ GV    D   +P LPGL
Sbjct: 61  SRTGRLDGKNRRSSXXXXXXXXXXXXXXXXXVSFESVASFEDNGVAVSADGVAMPNLPGL 120

Query: 121 QPDFWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTRE 180
           + DFWEGPQWDAFGFF++Y+WAFGI FA+IACGIAV TYNEGATDFK TPAYKES+Q+RE
Sbjct: 121 ETDFWEGPQWDAFGFFVQYMWAFGIGFALIACGIAVATYNEGATDFKSTPAYKESIQSRE 180

Query: 181 IL-EPEASNPDVFESNPTEVAPSLE 200
           +L EP++SN DVFESNPTEVAPSLE
Sbjct: 181 LLEEPDSSNSDVFESNPTEVAPSLE 205

[Close]

BLAST of CsaV3_1G003750 vs. TrEMBL
Match: tr|A0A067DTN2|A0A067DTN2_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g028069mg PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.2e-48
Identity = 133/219 (60.73%), Postives = 155/219 (70.78%), Query Frame = 0


Query: 1   MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEA---------RTLHLV 60
           M LTI N   + G+   ILY   T  P +    RR+ +  P+            RTLH+V
Sbjct: 1   MSLTIANTAGS-GSGSRILYTNPTTDPQH----RRHGITFPTSTCSSRITRAPFRTLHVV 60

Query: 61  Q-AKKSSFRTGRFDSKNR---XXXXXXXXXXXXXXXXRTAGVEMGSPVV-----ENAGVV 120
             AKK S RTGRFDSKNR       XXXXXXXXXXXXRTA +   S  +     ENAGV+
Sbjct: 61  SAAKKLSSRTGRFDSKNRRGNTGAIXXXXXXXXXXXXRTAEIGQDSTNINNNKFENAGVI 120

Query: 121 FDVDEN-LPQLPGLQPDFWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDF 180
             VD + +P+LPGL+PDFWEGPQW AFGFFL+YLWAFGIVFA++ACGIAV TYNEGATDF
Sbjct: 121 VGVDGSPMPELPGLEPDFWEGPQWGAFGFFLQYLWAFGIVFALVACGIAVATYNEGATDF 180

Query: 181 KETPAYKESVQTREILE-PEASNPDVFESNPTEVAPSLE 200
           KETPAYKESVQ+R++LE P+ASN DVFESNPTEVAPSL+
Sbjct: 181 KETPAYKESVQSRDLLEGPDASNSDVFESNPTEVAPSLD 214

[Close]

BLAST of CsaV3_1G003750 vs. TrEMBL
Match: tr|V4T215|V4T215_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10022208mg PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.2e-48
Identity = 133/219 (60.73%), Postives = 155/219 (70.78%), Query Frame = 0


Query: 1   MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEA---------RTLHLV 60
           M LTI N   + G+   ILY   T  P +    RR+ +  P+            RTLH+V
Sbjct: 1   MSLTIANTAGS-GSGSRILYTNPTTDPQH----RRHGITFPTSTCSSRITRAPFRTLHVV 60

Query: 61  Q-AKKSSFRTGRFDSKNR---XXXXXXXXXXXXXXXXRTAGVEMGSPVV-----ENAGVV 120
             AKK S RTGRFDSKNR       XXXXXXXXXXXXRTA +   S  +     ENAGV+
Sbjct: 61  SAAKKLSSRTGRFDSKNRRGNTGAIXXXXXXXXXXXXRTAEIGQDSTNINNNKFENAGVI 120

Query: 121 FDVDEN-LPQLPGLQPDFWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDF 180
             VD + +P+LPGL+PDFWEGPQW AFGFFL+YLWAFGIVFA++ACGIAV TYNEGATDF
Sbjct: 121 VGVDGSPMPELPGLEPDFWEGPQWGAFGFFLQYLWAFGIVFALVACGIAVATYNEGATDF 180

Query: 181 KETPAYKESVQTREILE-PEASNPDVFESNPTEVAPSLE 200
           KETPAYKESVQ+R++LE P+ASN DVFESNPTEVAPSL+
Sbjct: 181 KETPAYKESVQSRDLLEGPDASNSDVFESNPTEVAPSLD 214

The following BLAST results are available for this feature:

BLAST of CsaV3_1G003750 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138240.1	1.9e-97	100.00	PREDICTED: uncharacterized protein LOC101218989 [Cucumis sativus] >KGN63813.1 hy...	[more]
XP_008453388.1	7.0e-92	94.55	PREDICTED: uncharacterized protein LOC103494120 [Cucumis melo]	[more]
XP_022134616.1	2.1e-75	83.08	uncharacterized protein LOC111006843 [Momordica charantia]	[more]
XP_023515371.1	3.5e-75	82.50	uncharacterized protein LOC111779544 [Cucurbita pepo subsp. pepo]	[more]
XP_022987248.1	8.6e-74	81.50	uncharacterized protein LOC111484859 [Cucurbita maxima]	[more]

BLAST of CsaV3_1G003750 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G73885.1	2.7e-29	65.22	unknown protein	[more]

BLAST of CsaV3_1G003750 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_1G003750 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LPS1\|A0A0A0LPS1_CUCSA	1.3e-97	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G022520 PE=4 SV=1	[more]
tr\|A0A1S3BW57\|A0A1S3BW57_CUCME	4.7e-92	94.55	uncharacterized protein LOC103494120 OS=Cucumis melo OX=3656 GN=LOC103494120 PE=...	[more]
tr\|A0A2N9EF76\|A0A2N9EF76_FAGSY	8.3e-49	61.95	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS1166 PE=4 SV=1	[more]
tr\|A0A067DTN2\|A0A067DTN2_CITSI	3.2e-48	60.73	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g028069mg PE=4 SV=1	[more]
tr\|V4T215\|V4T215_9ROSI	3.2e-48	60.73	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10022208mg PE=4 ...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G003750.1	CsaV3_1G003750.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..199
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 185..199
None	No IPR available	PANTHER	PTHR36004	FAMILY NOT NAMED	coord: 2..199

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G003750	CSPI01G03730	Wild cucumber (PI 183967)	cpicucB001
CsaV3_1G003750	Cucsa.199010	Cucumber (Gy14) v1	cgycucB314
CsaV3_1G003750	Cp4.1LG18g07520	Cucurbita pepo (Zucchini)	cpecucB0431
CsaV3_1G003750	CsGy1G003660	Cucumber (Gy14) v2	cgybcucB002
CsaV3_1G003750	Carg17917	Silver-seed gourd	carcucB0494
CsaV3_1G003750	MELO3C017300.2	Melon (DHL92) v3.6.1	cucmedB051
CsaV3_1G003750	Cla97C06G124400	Watermelon (97103) v2	cucwmbB077
CsaV3_1G003750	Bhi01G002711	Wax gourd	cucwgoB012

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G003750	Cucumber (Gy14) v2	cgybcucB003
CsaV3_1G003750	Cucumber (Gy14) v2	cgybcucB201
CsaV3_1G003750	Cucumber (Gy14) v1	cgycucB436
CsaV3_1G003750	Cucurbita maxima (Rimu)	cmacucB0071
CsaV3_1G003750	Cucurbita maxima (Rimu)	cmacucB0101
CsaV3_1G003750	Cucurbita maxima (Rimu)	cmacucB0252
CsaV3_1G003750	Cucurbita maxima (Rimu)	cmacucB0466
CsaV3_1G003750	Cucurbita maxima (Rimu)	cmacucB0481
CsaV3_1G003750	Cucurbita maxima (Rimu)	cmacucB0817
CsaV3_1G003750	Cucurbita moschata (Rifu)	cmocucB0057
CsaV3_1G003750	Cucurbita moschata (Rifu)	cmocucB0091
CsaV3_1G003750	Cucurbita moschata (Rifu)	cmocucB0238
CsaV3_1G003750	Cucurbita moschata (Rifu)	cmocucB0467
CsaV3_1G003750	Cucurbita moschata (Rifu)	cmocucB0803
CsaV3_1G003750	Cucurbita pepo (Zucchini)	cpecucB0033
CsaV3_1G003750	Cucurbita pepo (Zucchini)	cpecucB0026
CsaV3_1G003750	Cucurbita pepo (Zucchini)	cpecucB0474
CsaV3_1G003750	Cucurbita pepo (Zucchini)	cpecucB0627
CsaV3_1G003750	Cucurbita pepo (Zucchini)	cpecucB0815
CsaV3_1G003750	Wild cucumber (PI 183967)	cpicucB002
CsaV3_1G003750	Wild cucumber (PI 183967)	cpicucB255
CsaV3_1G003750	Bottle gourd (USVL1VR-Ls)	cuclsiB024
CsaV3_1G003750	Bottle gourd (USVL1VR-Ls)	cuclsiB060
CsaV3_1G003750	Bottle gourd (USVL1VR-Ls)	cuclsiB082
CsaV3_1G003750	Melon (DHL92) v3.5.1	cucmeB006
CsaV3_1G003750	Melon (DHL92) v3.5.1	cucmeB026
CsaV3_1G003750	Melon (DHL92) v3.5.1	cucmeB055
CsaV3_1G003750	Melon (DHL92) v3.6.1	cucmedB006
CsaV3_1G003750	Melon (DHL92) v3.6.1	cucmedB024
CsaV3_1G003750	Watermelon (Charleston Gray)	cucwcgB064
CsaV3_1G003750	Watermelon (Charleston Gray)	cucwcgB071
CsaV3_1G003750	Watermelon (Charleston Gray)	cucwcgB089
CsaV3_1G003750	Watermelon (97103) v1	cucwmB045
CsaV3_1G003750	Watermelon (97103) v1	cucwmB071
CsaV3_1G003750	Watermelon (97103) v1	cucwmB106
CsaV3_1G003750	Watermelon (97103) v2	cucwmbB055
CsaV3_1G003750	Watermelon (97103) v2	cucwmbB060
CsaV3_1G003750	Wax gourd	cucwgoB042
CsaV3_1G003750	Wax gourd	cucwgoB075
CsaV3_1G003750	Cucumber (Chinese Long) v3	cuccucB000
CsaV3_1G003750	Cucumber (Chinese Long) v3	cuccucB036
CsaV3_1G003750	Silver-seed gourd	carcucB0419
CsaV3_1G003750	Silver-seed gourd	carcucB0549
CsaV3_1G003750	Silver-seed gourd	carcucB0629
CsaV3_1G003750	Silver-seed gourd	carcucB0880
CsaV3_1G003750	Silver-seed gourd	carcucB1089