Cp4.1LG18g07520 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG18g07520
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionAT-rich interactive domain-containing protein 5A, putative
LocationCp4.1LG18 : 7260200 .. 7262562 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTTCGATTTTTCTGATTTATAAGTTTAGGAAATTATTTAAAAGGGGTAATAAAGTCTTTTGGCCTCCCAAATATCCTAGAATATATAAATTAAAAATGATGTTATTTTATAAAAAAAATTCCTCTCTATCTCCTTATCCGCACAATCCTCCTCCTCCATTTTTCTGGGTGTTCAGAGCTCACTCTCCTCCACTCAAATGGCTCTGACCATAACCAATGGCGGCGCCGCTTGTGGCACCGGCGGGGGAATTCTCTATAGAACCTCCACCAGAACTCCTTCCAACCAATTCCTTTTCCGTCGCAACGCGCTCTTTTCGCCGTCTAAAGAAGCCCGCACCCTCCATGTCGTTCATTCAAAGAAATCCTCCTTCCGAATTGGCCGAATCGACAGTAAGAACCGGAGGAGCTCGACGCCAACCAAGGAACAGGAAGAACAACAAGAAGATGAACGAAATCGGATGGCCGAAATTGCTGAAAATGCCGGTGTAGCGTTTGATGTGGATGAAAATTTGCCGGAATTGCCTGGGCTCCAGCCTGATTTCTGGGAGGGTCAGCAGTGGGATCCCCTCGGCTTCTTCCTCGAGTACTTGTGGGCCTTTGGCATCGCTTTCGCGGTTCGATTTTTCCCTATCTTTAATTTCGCCAATTATGTCCTATAATTATTTGATTGATTCTGTTGTCTGTTCTAATCTTAGATAGCATTCAGCAAAAGATTCAGATTAATAACTTAGTTCCAGAAATCTAGTTGCCTCTGTAATTGACAGATGAGATTTGAGATAAGCGAGGCCCAAACACTAAATTAACCAGCAACTCAGCTTTTTCTTCAACATAACAAGAACAGAATCATGATCTAACATCAATTAGATGTTTTCTTTTGGGTAGTTTTTCTAGAAAAGGATAAAATAGATAGCTCATGTTCTGTTATCCTTTCGCAAATGGGCGATTCACTAATTCATTCATCATTACAATAGGTAATTGCATGTGGGATTGCTGTCACTACATACAACGAAGGAGCCACTGATTTCAAGGACACGCCTGCATACAAAGAATCAGTTCAAACTCAAGAGATATTAGAAGAACCCGAGGCATCAAACCCAGATGTCTTTGAATCTAATCCAACAGAGGTGGCTCCTAGTTTGGAATGATCTTGATATTTCGATATCAAAAACAGACCCCACATCTTGAATCCATTATCATCCTCGTAACCAGTTAAAGAAGTGAAAAGGAAACAAAGAATACTGTGTGAATTTGTAATGCCATAAGCTTTCTAGGTATGTTATGAAAACCTTATTCTATTGAATCTAGTAAAGATTTTGATTTTGCATGTCTTAGTTTTCTTGTCAGCATATTGTTCTTCTTTTAGGCCATTCTCATTTACTTCATTCTGTCTATCTGCTATGGCCTTTTACTTAGATTTCTCTCCTTAGGCTGACTGTTTTAGGGAGACAAAGGAACAAGACTTATCTGAAAACAGGGAACCATTTTTCTGTCAGCTGCTAAGAGAAACAACGTTATTGAACCAAAACAACCTACGGGGAATCTAATAAAGAAGAGCATATAATGTTGAACGAGATTTTAGATAATTGGTTTCAATGAAGAACTAGAAGAAACAGAAAAGTCTTCATAGCAATCACTACTTTGAGCTGAATTCCCGCCCTTGGCTTGAAACTAGCACTGATGCTGCCCAATCCTAACCCCACCATGCTAGGTTTTGGTGTTGGTTGACCCACTGGAGTAGCTGAAATCCATAAAAGTAGTGTCACAATGTATAACATGTCGTGCTTGTAGTAGAGCTGAACCAAAAACTATACCTAGAACCGTAGCATTGGTAATTGTGGTGTTGGTGTTTACTCTAGGAGAAACATGAGAACTGGGAGGACTTGGTGGCTCAAGGAGAGCTTCAAATGACCATTCAGAGAGTTATAAATGTTAGAACGAAGTAGAAGAAGATACTTAACAGGCTTTAGGATGACAGGATTATAGTTGTACCTGAACATGTGGAGATGTTAACTTGAAGGCTGCAAATATCAGGCAGCTGGGTAGCTCTAGTAGTGTTGATAGGGAAAGAACTCAAGGTAGTGCCATTCAGCAAGAGGCAAAGGCAGCTGGGGACACTGGTGTAGAGTTGTTTCAGGTTACCACAGCATGTCATCGGTGGCATCGATGCCATACCTTGCACGAAAGGCGCACACGATGCCAATGGAAGAAGACTCGCGGTGCATTGAGCTATGGTGGGGCTCGAGAGGGTCGGATCTTGTGAAACGGCAATCGGTAGAGTAACGTGCAGGAGAAAGAGCAAGGTTAGGCATGGGAGATATGGAAGAGATGCCATGGTGCAGAGACAATACAGATTTTGACTCTA

mRNA sequence

ATTTTCGATTTTTCTGATTTATAAGTTTAGGAAATTATTTAAAAGGGGTAATAAAGTCTTTTGGCCTCCCAAATATCCTAGAATATATAAATTAAAAATGATGTTATTTTATAAAAAAAATTCCTCTCTATCTCCTTATCCGCACAATCCTCCTCCTCCATTTTTCTGGGTGTTCAGAGCTCACTCTCCTCCACTCAAATGGCTCTGACCATAACCAATGGCGGCGCCGCTTGTGGCACCGGCGGGGGAATTCTCTATAGAACCTCCACCAGAACTCCTTCCAACCAATTCCTTTTCCGTCGCAACGCGCTCTTTTCGCCGTCTAAAGAAGCCCGCACCCTCCATGTCGTTCATTCAAAGAAATCCTCCTTCCGAATTGGCCGAATCGACAGTAAGAACCGGAGGAGCTCGACGCCAACCAAGGAACAGGAAGAACAACAAGAAGATGAACGAAATCGGATGGCCGAAATTGCTGAAAATGCCGGTGTAGCGTTTGATGTGGATGAAAATTTGCCGGAATTGCCTGGGCTCCAGCCTGATTTCTGGGAGGGTCAGCAGTGGGATCCCCTCGGCTTCTTCCTCGAGTACTTGTGGGCCTTTGGCATCGCTTTCGCGGTAATTGCATGTGGGATTGCTGTCACTACATACAACGAAGGAGCCACTGATTTCAAGGACACGCCTGCATACAAAGAATCAGTTCAAACTCAAGAGATATTAGAAGAACCCGAGGCATCAAACCCAGATGTCTTTGAATCTAATCCAACAGAGGTGGCTCCTAGTTTGGAATGATCTTGATATTTCGATATCAAAAACAGACCCCACATCTTGAATCCATTATCATCCTCGTAACCAGTTAAAGAAGTGAAAAGGAAACAAAGAATACTGTGTGAATTTGTAATGCCATAAGCTTTCTAGGTATGTTATGAAAACCTTATTCTATTGAATCTAGTAAAGATTTTGATTTTGCATGTCTTAGTTTTCTTGTCAGCATATTGTTCTTCTTTTAGGCCATTCTCATTTACTTCATTCTGTCTATCTGCTATGGCCTTTTACTTAGATTTCTCTCCTTAGGCTGACTGTTTTAGGGAGACAAAGGAACAAGACTTATCTGAAAACAGGGAACCATTTTTCTGTCAGCTGCTAAGAGAAACAACGTTATTGAACCAAAACAACCTACGGGGAATCTAATAAAGAAGAGCATATAATGTTGAACGAGATTTTAGATAATTGGTTTCAATGAAGAACTAGAAGAAACAGAAAAGTCTTCATAGCAATCACTACTTTGAGCTGAATTCCCGCCCTTGGCTTGAAACTAGCACTGATGCTGCCCAATCCTAACCCCACCATGCTAGGTTTTGGTGTTGGTTGACCCACTGGAGTAGCTGAAATCCATAAAAGTAGTGTCACAATGTATAACATGTCGTGCTTGTAGTAGAGCTGAACCAAAAACTATACCTAGAACCGTAGCATTGGTAATTGTGGTGTTGGTGTTTACTCTAGGAGAAACATGAGAACTGGGAGGACTTGGTGGCTCAAGGAGAGCTTCAAATGACCATTCAGAGAGTTATAAATGTTAGAACGAAGTAGAAGAAGATACTTAACAGGCTTTAGGATGACAGGATTATAGTTGTACCTGAACATGTGGAGATGTTAACTTGAAGGCTGCAAATATCAGGCAGCTGGGTAGCTCTAGTAGTGTTGATAGGGAAAGAACTCAAGGTAGTGCCATTCAGCAAGAGGCAAAGGCAGCTGGGGACACTGGTGTAGAGTTGTTTCAGGTTACCACAGCATGTCATCGGTGGCATCGATGCCATACCTTGCACGAAAGGCGCACACGATGCCAATGGAAGAAGACTCGCGGTGCATTGAGCTATGGTGGGGCTCGAGAGGGTCGGATCTTGTGAAACGGCAATCGGTAGAGTAACGTGCAGGAGAAAGAGCAAGGTTAGGCATGGGAGATATGGAAGAGATGCCATGGTGCAGAGACAATACAGATTTTGACTCTA

Coding sequence (CDS)

ATGGCTCTGACCATAACCAATGGCGGCGCCGCTTGTGGCACCGGCGGGGGAATTCTCTATAGAACCTCCACCAGAACTCCTTCCAACCAATTCCTTTTCCGTCGCAACGCGCTCTTTTCGCCGTCTAAAGAAGCCCGCACCCTCCATGTCGTTCATTCAAAGAAATCCTCCTTCCGAATTGGCCGAATCGACAGTAAGAACCGGAGGAGCTCGACGCCAACCAAGGAACAGGAAGAACAACAAGAAGATGAACGAAATCGGATGGCCGAAATTGCTGAAAATGCCGGTGTAGCGTTTGATGTGGATGAAAATTTGCCGGAATTGCCTGGGCTCCAGCCTGATTTCTGGGAGGGTCAGCAGTGGGATCCCCTCGGCTTCTTCCTCGAGTACTTGTGGGCCTTTGGCATCGCTTTCGCGGTAATTGCATGTGGGATTGCTGTCACTACATACAACGAAGGAGCCACTGATTTCAAGGACACGCCTGCATACAAAGAATCAGTTCAAACTCAAGAGATATTAGAAGAACCCGAGGCATCAAACCCAGATGTCTTTGAATCTAATCCAACAGAGGTGGCTCCTAGTTTGGAATGA

Protein sequence

MALTITNGGAACGTGGGILYRTSTRTPSNQFLFRRNALFSPSKEARTLHVVHSKKSSFRIGRIDSKNRRSSTPTKEQEEQQEDERNRMAEIAENAGVAFDVDENLPELPGLQPDFWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEASNPDVFESNPTEVAPSLE
Homology
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BLAST of Cp4.1LG18g07520 vs. TrEMBL
Match: A0A0A0LPS1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G022520 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 2.6e-81
Identity = 164/202 (81.19%), Postives = 173/202 (85.64%), Query Frame = 1 

Query: 1   MALTITNGGAACGTGGGILYRTSTRTPSNQFLFRRNALFSPSKEARTLHVVHSKKSSFRI 60
           M LTITNGGA  GT GGILYRT TRTPSN FLFRRNALF PSKEARTLH+V +KKSSFR 
Sbjct: 1   MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRT 60

Query: 61  GRIDSKNRRSSTPTKEQEEQQEDERNRMA------EIAENAGVAFDVDENLPELPGLQPD 120
           GR DSKNR+SST  KEQEE  E+ERNR A       + ENAGV FDVDENLP+LPGLQPD
Sbjct: 61  GRFDSKNRKSSTTIKEQEE--EEERNRTAGVEMGSPVVENAGVVFDVDENLPQLPGLQPD 120

Query: 121 FWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQEILE 180
           FWEG QWD  GFFLEYLWAFGI FA+IACGIAVTTYNEGATDFK+TPAYKESVQT+EIL 
Sbjct: 121 FWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREIL- 180

Query: 181 EPEASNPDVFESNPTEVAPSLE 197
           EPEASNPDVFESNPTEVAPSLE
Sbjct: 181 EPEASNPDVFESNPTEVAPSLE 199

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BLAST of Cp4.1LG18g07520 vs. TrEMBL
Match: A0A061G1U2_THECC (AT-rich interactive domain-containing protein 5A, putative OS=Theobroma cacao GN=TCM_012325 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 3.7e-48
Identity = 122/213 (57.28%), Postives = 143/213 (67.14%), Query Frame = 1 

Query: 1   MALTIT-NGGAACGTGGG--ILYRTSTRTPSNQFLFRRNALFSPSKEARTLHVVHSKKSS 60
           MALT+T + G++ G G G  IL    T+    +   RR  LF  S     L    +KK S
Sbjct: 1   MALTMTISHGSSTGGGNGVRILCGNPTKQSYTRLPPRRRVLFPTSPRILHLTTFAAKKFS 60

Query: 61  FRIGRIDSKNRRSSTPTKEQEEQQEDERNRMAEIAEN---AGVAFDV-----------DE 120
            R GR DSKNRRS+  TKEQ+E+QE ++ R AEI E     GV FD             +
Sbjct: 61  PRTGRFDSKNRRSALTTKEQDEEQE-QKQRTAEIEEQNVVVGVGFDNVGGSSSEVSADGK 120

Query: 121 NLPELPGLQPDFWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAY 180
             PELPGLQP  WEG QWD LGF ++YLWAFGI FA+IACGIAV+TYNEGATDFK+TPAY
Sbjct: 121 PFPELPGLQPALWEGPQWDVLGFLVQYLWAFGIVFALIACGIAVSTYNEGATDFKETPAY 180

Query: 181 KESVQTQEILEEPEASNPDVFESNPTEVAPSLE 197
           KES+Q+QE+LEEPEASN DVFE NPTEVAPSLE
Sbjct: 181 KESIQSQELLEEPEASNSDVFELNPTEVAPSLE 212

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BLAST of Cp4.1LG18g07520 vs. TrEMBL
Match: W9R579_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_019979 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 6.4e-48
Identity = 123/205 (60.00%), Postives = 140/205 (68.29%), Query Frame = 1 

Query: 1   MALTITNGGAACGTGGGILYRTSTRTPSNQFLFRRNALFSPSKEARTLHVVHSKKSSFRI 60
           MALTI   G   G G  IL   ST  P  +   RR+ + SP     TLHVV +KK S R 
Sbjct: 1   MALTIIPNG---GGGATILSGNSTTHPYTRLPIRRHVI-SPLSHRTTLHVVAAKKFSPRS 60

Query: 61  GRIDSKNRRSSTPTKEQ--EEQQEDERNRMAEIA----ENAGVAFDVDEN---LPELPGL 120
           G    KNRR+ST T     E  Q+ E+ R AEI     +    A D  ++   LP+LPG 
Sbjct: 61  G----KNRRTSTTTTRDQLELDQDQEQKRTAEIKRPGDDARSAAVDTADDGYFLPKLPGD 120

Query: 121 QPDFWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQE 180
           +PDFWEG+QWD LGFF+EYLWAF I FA+IACGIAV TYNEGATDFKDTPAYKESVQ+QE
Sbjct: 121 EPDFWEGEQWDGLGFFVEYLWAFSIVFALIACGIAVATYNEGATDFKDTPAYKESVQSQE 180

Query: 181 ILEEPEASNPDVFESNPTEVAPSLE 197
           +LEEPEASNPDVFESNPTEVAPSLE
Sbjct: 181 LLEEPEASNPDVFESNPTEVAPSLE 197

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BLAST of Cp4.1LG18g07520 vs. TrEMBL
Match: A0A067JJF5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05879 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 6.4e-48
Identity = 117/215 (54.42%), Postives = 145/215 (67.44%), Query Frame = 1 

Query: 1   MALTITNGGAACGTGGGILYRTSTRTPSNQFLFRRNALFSPSKEARTLHVVHSKK-SSFR 60
           MAL+I +G    G+GG I++  STR  S      R  +  P    R+LH+V +KK SS R
Sbjct: 1   MALSIASGN---GSGGRIVFTNSTRHHSQ---IHRPQILLPLSPRRSLHIVSAKKLSSSR 60

Query: 61  IGRIDSKNRRSSTPTKEQEEQQEDERNRMAEIAENAGVAFDVD----EN----------- 120
            GR DS+NRRSS  T+++E+++E    R AEI    G   D      EN           
Sbjct: 61  TGRFDSRNRRSSITTRDKEDEEE----RTAEIERTGGSNEDFSGSKVENVSTSSVDAEDD 120

Query: 121 ---LPELPGLQPDFWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTP 180
              LP LPG +PDFWEG +WD LGFF++Y+WAFG+ FA+IACGIAV TYNEGATDFK+TP
Sbjct: 121 GYFLPPLPGDEPDFWEGSKWDGLGFFVQYMWAFGVVFALIACGIAVVTYNEGATDFKETP 180

Query: 181 AYKESVQTQEILEEPEASNPDVFESNPTEVAPSLE 197
           AYKES+Q+QE+LEEPEASN DVFESNPTEVAPSL+
Sbjct: 181 AYKESIQSQELLEEPEASNSDVFESNPTEVAPSLD 205

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BLAST of Cp4.1LG18g07520 vs. TrEMBL
Match: M5WVM4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011909mg PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 8.3e-48
Identity = 118/201 (58.71%), Postives = 144/201 (71.64%), Query Frame = 1 

Query: 1   MALTITNGGAACGTGGGILYRTSTRTPSNQFLFRRNALFSPSKEARTLHVVHSKKSSFRI 60
           MALTI N GA   TGG  L  +S+ + S+Q    R+ LF P    RTLHVV +K+ + R 
Sbjct: 1   MALTIANSGA---TGGARLLYSSSTSLSSQ----RHFLF-PLSPRRTLHVVSAKRFTSRT 60

Query: 61  GRIDSKNRRSSTPTKEQEEQQEDERNRMAEIAENAGVAFDVDEN-----LPELPGLQPDF 120
           GR D +N+R +T T++QE Q      R AEI EN G  F VD       LP+LPG +PDF
Sbjct: 61  GRSDGRNKRGTTTTRDQE-QDPLRLERTAEI-ENVGGGFAVDNVDDGYFLPKLPGDEPDF 120

Query: 121 WEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEE 180
           WEG++WD LGFF+EYLWAFGI FA+IAC +A T+YNEGATDFK+TP YK+S Q++E LEE
Sbjct: 121 WEGEKWDFLGFFVEYLWAFGIGFALIACFVAATSYNEGATDFKETPVYKDSFQSREFLEE 180

Query: 181 PEASNPDVFESNPTEVAPSLE 197
           PEA+NPDVFESNPTEVAPSLE
Sbjct: 181 PEATNPDVFESNPTEVAPSLE 191

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BLAST of Cp4.1LG18g07520 vs. TAIR10
Match: AT1G73885.1 (AT1G73885.1 unknown protein)

HSP 1 Score: 124.0 bits (310), Expect = 1.0e-28
Identity = 86/212 (40.57%), Postives = 122/212 (57.55%), Query Frame = 1 

Query: 1   MALTITNGGAACGTGGGILYRTSTRTPSNQFLFRRNALFSPSKEARTLHVVHSKKSSFRI 60
           MALT+++GG      GG   R +  T S++  F                      S+FR+
Sbjct: 1   MALTVSSGG------GGARIRCNDLTDSSRNPF----------------------STFRL 60

Query: 61  GRIDSKNRRSSTPTKEQEEQQE--DERNRMAEIAEN--------AGVAFDVDEN------ 120
               + +R     T++QEE  E  D  N  ++I  N            F  D        
Sbjct: 61  VNFPNPSR-----TEQQEEGNEGFDGENPPSQIVINDEDGDRTVVNTRFRGDPKDAPKFA 120

Query: 121 LPELPGLQPDFWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYK 180
           + +LPGL+PD +EG++WD LGFF++YLWAFGI FA+I+ G+A  TYNEGATDFK+TP YK
Sbjct: 121 IKDLPGLEPDPFEGEKWDGLGFFVQYLWAFGILFALISGGLAAGTYNEGATDFKETPVYK 179

Query: 181 ESVQTQEILEEPEASN-PDVFESNPTEVAPSL 196
           E++Q++++L+E E+SN  DVFESNPTEVAP++
Sbjct: 181 EAIQSRDLLDEAESSNSEDVFESNPTEVAPTI 179

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BLAST of Cp4.1LG18g07520 vs. NCBI nr
Match: gi|659106649|ref|XP_008453388.1| (PREDICTED: uncharacterized protein LOC103494120 [Cucumis melo])

HSP 1 Score: 312.8 bits (800), Expect = 4.3e-82
Identity = 167/203 (82.27%), Postives = 176/203 (86.70%), Query Frame = 1 

Query: 1   MALTITNGGAACGTGGGILYRTSTRTP-SNQFLFRRNALFSPSKEARTLHVVHSKKSSFR 60
           M LTITNGGA  GT GGILYRT TRTP SN FLFRRNALF PSKEARTLHVV +KKSSFR
Sbjct: 1   MPLTITNGGATAGTTGGILYRTFTRTPPSNYFLFRRNALFHPSKEARTLHVVQAKKSSFR 60

Query: 61  IGRIDSKNRRSSTPTKEQEEQQEDERNRMA------EIAENAGVAFDVDENLPELPGLQP 120
            GR DSKNRRSST  KEQ++++E+ERNR A       I ENAGV FDVDENLPELPGLQP
Sbjct: 61  TGRFDSKNRRSSTTIKEQDKEEEEERNRTAGIEMGSPIVENAGVVFDVDENLPELPGLQP 120

Query: 121 DFWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQEIL 180
           DFWEG QWD LGFFLEYLWAFGI FA+IACGIAVTTYNEGATDFK+TPAYKESVQT+EIL
Sbjct: 121 DFWEGPQWDALGFFLEYLWAFGIVFALIACGIAVTTYNEGATDFKETPAYKESVQTREIL 180

Query: 181 EEPEASNPDVFESNPTEVAPSLE 197
            EPEASNPDVFESNPTEVAPSLE
Sbjct: 181 -EPEASNPDVFESNPTEVAPSLE 202

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BLAST of Cp4.1LG18g07520 vs. NCBI nr
Match: gi|449440937|ref|XP_004138240.1| (PREDICTED: uncharacterized protein LOC101218989 [Cucumis sativus])

HSP 1 Score: 309.7 bits (792), Expect = 3.7e-81
Identity = 164/202 (81.19%), Postives = 173/202 (85.64%), Query Frame = 1 

Query: 1   MALTITNGGAACGTGGGILYRTSTRTPSNQFLFRRNALFSPSKEARTLHVVHSKKSSFRI 60
           M LTITNGGA  GT GGILYRT TRTPSN FLFRRNALF PSKEARTLH+V +KKSSFR 
Sbjct: 1   MPLTITNGGATVGTSGGILYRTFTRTPSNYFLFRRNALFHPSKEARTLHLVQAKKSSFRT 60

Query: 61  GRIDSKNRRSSTPTKEQEEQQEDERNRMA------EIAENAGVAFDVDENLPELPGLQPD 120
           GR DSKNR+SST  KEQEE  E+ERNR A       + ENAGV FDVDENLP+LPGLQPD
Sbjct: 61  GRFDSKNRKSSTTIKEQEE--EEERNRTAGVEMGSPVVENAGVVFDVDENLPQLPGLQPD 120

Query: 121 FWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQEILE 180
           FWEG QWD  GFFLEYLWAFGI FA+IACGIAVTTYNEGATDFK+TPAYKESVQT+EIL 
Sbjct: 121 FWEGPQWDAFGFFLEYLWAFGIVFAIIACGIAVTTYNEGATDFKETPAYKESVQTREIL- 180

Query: 181 EPEASNPDVFESNPTEVAPSLE 197
           EPEASNPDVFESNPTEVAPSLE
Sbjct: 181 EPEASNPDVFESNPTEVAPSLE 199

[Close]
BLAST of Cp4.1LG18g07520 vs. NCBI nr
Match: gi|568864805|ref|XP_006485781.1| (PREDICTED: uncharacterized protein LOC102624149 [Citrus sinensis])

HSP 1 Score: 203.0 bits (515), Expect = 4.8e-49
Identity = 123/219 (56.16%), Postives = 147/219 (67.12%), Query Frame = 1 

Query: 1   MALTITNGGAACGTGGGILYRTSTRTPSNQFLFRRNALFSPSKEA---------RTLHVV 60
           M+LTI N  A  G G  ILY   T  P +    RR+ +  P+            RTLHVV
Sbjct: 1   MSLTIANT-AGSGRGSRILYTNPTTDPQH----RRHGITFPTSTCSSRITRAPFRTLHVV 60

Query: 61  HS-KKSSFRIGRIDSKNRRSSTPT-KEQEEQQEDERNRMAEIAE-----------NAGVA 120
            + KK S R GR DSKNRR +T      EE Q+D++ RMAEI +           NAGV 
Sbjct: 61  SAAKKLSSRTGRFDSKNRRGNTGAITTTEEDQKDQQQRMAEIGQDSTNINNNKFVNAGVI 120

Query: 121 FDVDEN-LPELPGLQPDFWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDF 180
             VD + +PELPGL+PDFWEG QWD  GFFL+YLWAFGI FA++ACGIAV TYNEGATDF
Sbjct: 121 VGVDGSPMPELPGLEPDFWEGPQWDAFGFFLQYLWAFGIVFALVACGIAVATYNEGATDF 180

Query: 181 KDTPAYKESVQTQEILEEPEASNPDVFESNPTEVAPSLE 197
           K+TPAYKESVQ++++LE P+ASN DVFESNPTEVAPSL+
Sbjct: 181 KETPAYKESVQSRDLLEGPDASNSDVFESNPTEVAPSLD 214

[Close]
BLAST of Cp4.1LG18g07520 vs. NCBI nr
Match: gi|645270055|ref|XP_008240280.1| (PREDICTED: uncharacterized protein LOC103338801 [Prunus mume])

HSP 1 Score: 202.6 bits (514), Expect = 6.3e-49
Identity = 119/201 (59.20%), Postives = 146/201 (72.64%), Query Frame = 1 

Query: 1   MALTITNGGAACGTGGG-ILYRTSTRTPSNQFLFRRNALFSPSKEARTLHVVHSKKSSFR 60
           MALTI N GA   TGG  +LY +S R P      +R+ LF P    RTLHVV +K+ + R
Sbjct: 1   MALTIANSGA---TGGARLLYSSSARHPYTNLSSQRHFLF-PLSPRRTLHVVSAKRFTSR 60

Query: 61  IGRIDSKNRRSSTPTKEQEEQQEDERNRMAEIAE-NAGVAFD-VDEN--LPELPGLQPDF 120
            GR D KN+R +T T++QE Q      R AEI   + GV+ D VD+   LP+LPG +PDF
Sbjct: 61  TGRSDGKNKRGTTTTRDQE-QDPLRLERTAEIENIDGGVSVDNVDDGYFLPKLPGDEPDF 120

Query: 121 WEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEE 180
           WEG++WD LGFF+EYLWAFGI FA+IAC +A T+YNEGATDFK+TP YK+S Q++E LEE
Sbjct: 121 WEGEKWDFLGFFVEYLWAFGIGFALIACFVAATSYNEGATDFKETPVYKDSFQSREFLEE 180

Query: 181 PEASNPDVFESNPTEVAPSLE 197
           PEA+NPDVFESNPTEVAPSLE
Sbjct: 181 PEATNPDVFESNPTEVAPSLE 196

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BLAST of Cp4.1LG18g07520 vs. NCBI nr
Match: gi|694360552|ref|XP_009360163.1| (PREDICTED: uncharacterized protein LOC103950656 [Pyrus x bretschneideri])

HSP 1 Score: 201.1 bits (510), Expect = 1.8e-48
Identity = 116/202 (57.43%), Postives = 146/202 (72.28%), Query Frame = 1 

Query: 1   MALTITNGGAACGTGGGILYRTSTRT---PSNQFLFRRNALFSPSKEARTLHVVHSKKSS 60
           MALTI N G++ G G  +LY +ST T   P     F+R+ LF PS   R L+VV +K+ +
Sbjct: 1   MALTIANSGSSTG-GARVLYSSSTTTRQYPYTNLSFQRHLLF-PSSSRRALYVVSAKRFT 60

Query: 61  FRIGRIDSKNRRSSTPTKEQEEQQEDERNRMAEIAE-NAGVAFDVDEN--LPELPGLQPD 120
            R GR D KNR+S+T T++QE+     + R AEI     GV  +VD+   LP+LPG +P 
Sbjct: 61  SRTGRTDGKNRKSATTTRDQEQDMMGSQ-RTAEIENVGGGVVENVDDGYFLPKLPGDEPC 120

Query: 121 FWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQTQEILE 180
           FWEG++WD LGFF+EYLWAFGI FA+IAC +A T+YNEGATDFK+TP YK+S Q++E LE
Sbjct: 121 FWEGEKWDWLGFFVEYLWAFGIGFALIACLVAATSYNEGATDFKETPVYKDSFQSREFLE 180

Query: 181 EPEASNPDVFESNPTEVAPSLE 197
           EPEASN DVFESNPTEVAPSLE
Sbjct: 181 EPEASNQDVFESNPTEVAPSLE 199

The following BLAST results are available for this feature:
BLAST of Cp4.1LG18g07520 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG18g07520 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LPS1_CUCSA2.6e-8181.19Uncharacterized protein OS=Cucumis sativus GN=Csa_1G022520 PE=4 SV=1[more]
A0A061G1U2_THECC3.7e-4857.28AT-rich interactive domain-containing protein 5A, putative OS=Theobroma cacao GN... [more]
W9R579_9ROSA6.4e-4860.00Uncharacterized protein OS=Morus notabilis GN=L484_019979 PE=4 SV=1[more]
A0A067JJF5_JATCU6.4e-4854.42Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05879 PE=4 SV=1[more]
M5WVM4_PRUPE8.3e-4858.71Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011909mg PE=4 SV=1[more]
BLAST of Cp4.1LG18g07520 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G73885.11.0e-2840.57 unknown protein[more]
BLAST of Cp4.1LG18g07520 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659106649|ref|XP_008453388.1|4.3e-8282.27PREDICTED: uncharacterized protein LOC103494120 [Cucumis melo][more]
gi|449440937|ref|XP_004138240.1|3.7e-8181.19PREDICTED: uncharacterized protein LOC101218989 [Cucumis sativus][more]
gi|568864805|ref|XP_006485781.1|4.8e-4956.16PREDICTED: uncharacterized protein LOC102624149 [Citrus sinensis][more]
gi|645270055|ref|XP_008240280.1|6.3e-4959.20PREDICTED: uncharacterized protein LOC103338801 [Prunus mume][more]
gi|694360552|ref|XP_009360163.1|1.8e-4857.43PREDICTED: uncharacterized protein LOC103950656 [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0009507 chloroplast
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG18g07520.1Cp4.1LG18g07520.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 74..95
scor
NoneNo IPR availablePANTHERPTHR36004FAMILY NOT NAMEDcoord: 2..196
score: 7.5
NoneNo IPR availablePANTHERPTHR36004:SF1SUBFAMILY NOT NAMEDcoord: 2..196
score: 7.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG18g07520Cucsa.199010Cucumber (Gy14) v1cgycpeB0555
Cp4.1LG18g07520CmaCh10G002400Cucurbita maxima (Rimu)cmacpeB080
Cp4.1LG18g07520CmoCh10G002540Cucurbita moschata (Rifu)cmocpeB055
Cp4.1LG18g07520Cla018981Watermelon (97103) v1cpewmB374
Cp4.1LG18g07520Csa1G022520Cucumber (Chinese Long) v2cpecuB352
Cp4.1LG18g07520MELO3C017300Melon (DHL92) v3.5.1cpemeB336
Cp4.1LG18g07520ClCG06G014890Watermelon (Charleston Gray)cpewcgB337
Cp4.1LG18g07520CSPI01G03730Wild cucumber (PI 183967)cpecpiB353
Cp4.1LG18g07520Lsi06G013380Bottle gourd (USVL1VR-Ls)cpelsiB306
Cp4.1LG18g07520MELO3C017300.2Melon (DHL92) v3.6.1cpemedB394
Cp4.1LG18g07520CsaV3_1G003750Cucumber (Chinese Long) v3cpecucB0431
Cp4.1LG18g07520Bhi01G002711Wax gourdcpewgoB0441
Cp4.1LG18g07520CsGy1G003660Cucumber (Gy14) v2cgybcpeB041
Cp4.1LG18g07520Carg17917Silver-seed gourdcarcpeB0646
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG18g07520Cucumber (Chinese Long) v3cpecucB0436
Cp4.1LG18g07520Cucumber (Chinese Long) v3cpecucB0463
Cp4.1LG18g07520Wax gourdcpewgoB0451
Cp4.1LG18g07520Cucurbita pepo (Zucchini)cpecpeB026
Cp4.1LG18g07520Cucurbita pepo (Zucchini)cpecpeB032
Cp4.1LG18g07520Cucurbita pepo (Zucchini)cpecpeB364
Cp4.1LG18g07520Cucurbita pepo (Zucchini)cpecpeB349
Cp4.1LG18g07520Cucurbita maxima (Rimu)cmacpeB128
Cp4.1LG18g07520Cucurbita maxima (Rimu)cmacpeB229
Cp4.1LG18g07520Cucurbita moschata (Rifu)cmocpeB105
Cp4.1LG18g07520Cucurbita moschata (Rifu)cmocpeB196
Cp4.1LG18g07520Cucurbita moschata (Rifu)cmocpeB390
Cp4.1LG18g07520Wild cucumber (PI 183967)cpecpiB358
Cp4.1LG18g07520Cucumber (Chinese Long) v2cpecuB357
Cp4.1LG18g07520Bottle gourd (USVL1VR-Ls)cpelsiB286
Cp4.1LG18g07520Watermelon (Charleston Gray)cpewcgB331
Cp4.1LG18g07520Watermelon (97103) v1cpewmB367
Cp4.1LG18g07520Melon (DHL92) v3.5.1cpemeB322
Cp4.1LG18g07520Cucumber (Gy14) v2cgybcpeB046
Cp4.1LG18g07520Cucumber (Gy14) v2cgybcpeB621
Cp4.1LG18g07520Melon (DHL92) v3.6.1cpemedB378
Cp4.1LG18g07520Melon (DHL92) v3.6.1cpemedB382
Cp4.1LG18g07520Silver-seed gourdcarcpeB0543
Cp4.1LG18g07520Silver-seed gourdcarcpeB0845