CsaV3_1G001280 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G001280
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	short-chain dehydrogenase TIC 32, chloroplastic
Location	chr1 : 753010 .. 758844 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATACTCTGACATTGACAACATCAATTGGACAGTTGTGAGCAACCCACCTTGATAGAGTGGTCATCAACCTACCTGAAAAATTCCCTCTTTTTCACTTTTTCTCTTTTTCCTTTTTCCTTTTTCCTCCTCCTCTTTTCTAAATTGTTATTAATATTAATGTTGTAATGGGCAATACACAATACAACACATAGAGGCATTTTTGAGTGAATGGGTGACCATTGGAATGGGTTTTCTTTTCTTATAAAAAGCAAAAAAGGATTTTATTGTTGAAAATGGTATTTTCAGTTTCCATTATTCTAAGTTTGGGAAAACTTATGAAGGATACTCTTAGATACTTAGCAGGAATTCCAGGCCCCAGTGGCTATGGCTCCAAATCTACTGCTGAACAAGTCTCTCTATTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTACTTCTCAACTTACTGCCATTATCACTGGTAAATTCTTGTTTACATTTATTTAATTTAATTCTTGTAATTAATTTTGATTTCTTATTTTTCTTTTCATTAGTGTCTCTAATGAGTTTACTCTACTGTGATGTGTAATTCTTGAAGTTTTGAAATTTAAAATCCTTTTCTGATTTTGAAGTTTTGGAGAATCATATTAATATATATATATATATACTGCTAAATTGGGTGAATTATAAATTGTGGTTGGCTTTTGAAGGTTTCTCAGTGGGTTTTTCAAGGTTTTGCATGCATTCAACGTCTCTCTCTCTCTTAAGAGATTTTTTTTTTAGTTCAGAAAGGCTATTTTTTTAGTTGGAAATTTGCTAAATGAAAGGCAGAATTTTGGATAGATAAACAAAAACTCATAGATAGCTTTATAGTGTTTGATAAAGTTTTGATTGTTTATGAATTTTTTATCAGAGCTAAATCTTTTAACTTTTTCATATAATAAGGTTCAAATTTGCCATTAAACCCTATTTTTTTTTTCAAGATTTAGGAAGTGGGATTGTTATTATTATTGTTATTTTTTTATGATAACTATGTTCTTTCATTTGAGGCTCTCATATCAATAGCAGAGATATGATTTTGTCACTTTTCAGATTGTATTTTGTTTCAACACTCACCTGTGTGTGTATATATACCAGCTTTTAACAGCCACACATCAAAAGAATATATATATATATATATATAAATGAAAATTTTAGTCAAATTATATATGTAAATTATTTAGTTTTGATTTGAAAAGGGGCAACATCAGGAATTGGGGCAGAAACAGCAAGAGTATTGGCAAAGAGAGGAGTGAAAATAGTGATGACAGCAAGAGACTTGAAAAAAGCAGCTCAAGTTAAAGAAGCAATTCAAAAAGAAAGCCCTGAGGCTGAGATTATTGTGTTTGAAATCGATCTCAGTTCATTGGCTTCTGTCCAAAGCTTTTGTAATCAGTTTCTTTCTCTTGGACTCCCACTTAACATTCTCATGTAATTCTCTCTCTCTCTCTGCATGTGTACGCATGTAAATCACAAAACTGTTAAAAATACGTTAAAAAATACAGTAAAATTTATAATTTTTTAAATTATCAATAATACACTATTAAATGTCTATCCATAGATCTAAAACTTTTTGTTTTGTTATATATGAAAATGTCCCTATATATAACTTAAAAAATAAAAAATATACAATAAATTATTTTAAATAGTAAAACGGTTGAAAATATTTACAATTATAATAAAATATGGAAGAATATATGTGATAAACCGCAATGATCTAACTGTGATCTATCACGAATTACGAATAGATTGTGTGGAATTTGGTTATATTTATAAATATTTTGGTTGATTTTACCTCGTTTGAAAATAACCTTTAATATATATTATTTATTTTTATACGCAGAAATAATGCTGGAGTCTTCTCCAAGAATTTGGAGTTCTCTGAAGACAAAGTTGAGTTGACATTTGCAACAAATTATTTGGGTATGTCTACATCTTTTGTTACACTATTTATCTTAATTATTATTAATTTTTTAGCTTAGTGTTTATTTGAACATATATATATATATATATATTACTTAACACCCAATATTTGGAAGCAACCCACGTCTTCATACAATGAGTTATCTCAATCCATATGTCAGTACAAAAAAGATGAATAAGAAATAAAAGCCGACCAATTTTCTTATCTAAATTTCTTTAGATACAAGAATATTAAATTTGTCTTTTAACTTATTTGCTTAAAGTTTTAGATGATATCGAAACATCTTAGACAGAAATAAACTTCTTAAAGTCAGAAATTAGGTTTCGAAATCAATTAGAATGGGTTAATGGTATAAGTTTGACAAATAATTACATTACAAAGTGTTAATACCACTTGAAAAGTGATAGAATAGGATTAATTAAGTCCATTGAAATTACCTTTGGAAGAGAGAAAAAAAAAAAGAAGGAGAAGAAAAGGAAAAGACAAACCGACCAGGTGTAAAAGGATATATTAGGGAACCCAACAATGTATGGTGGCGTATCTGGCAGTGGGTCCCGACTTGAGAAAATATGCACCAAACACAAATCAATGTAAAGACAAGTGAAACCTGGGACCCGTGTCCACCCTCGTGTAGCTTTCAAACTAAGTTATAAGTGTTCAAATATAGCAAAAAGAACTACTATCTATATTATATAATAGTCGTTATCTTTCAACGCGATGATAGTAAAAATTTTACTGTATTTGTATTTATAAATATATATTTTTTTATTTTTCAAATTAATCTAGGATTAATTTATAGTTTATAAAGAATTTTTGCTATAATATATATTGTACATGAAAGTTGAAATAAAGCTCCTTTAGACATGAATTTCAATTTCAATTTTATCTTATAAAATTAATTTTATTTTTTATTTAAATAATATAACTTATTGAACACAAAGTTCATAAACTTAATATACTTTTTAAAGGTTTAAAAACAATATAGCTATTTGTTACTTTAAGATTTTAACCTATAAGAGTTGAAGTGTTTCCAAGTAGATAACATTTTCTATCTACCATCTTAAAGATGTATAGCTCCAAAAGCAATTTATTGCAGTTTAGCATGAAACACTCAATTGATGACTTTTCTAAAAGTAACACTACATTCAAGCTAATTCCAACTTAAACTTTTTTACAATATGTGAGGTGAAAGATCAAAACTACGCTTTGGAGTTAAAATTATCATCAATATTGAGAGTTTAAGGTTGGACTATCATTAACATTGAGGGTTACAAATGCAATTATATAATATATGATTTGAATGATTTTTGTTCATCTTCTTTGCAGGACATTATTTACTAACAGAGAGGCTGTTAGAGAAAATGATAGAAACAGCAGCCAAGACAGGAATTGAAGGAAGGATTATCAACGTTTCATCGGTGGTTCATGGCTGGGTGAAGAAAGATGGTTTAAGCTTTCGTCAAATGCTCAACCCAAACAGGTATGGCCAATCATATTTAGAGCCTCCTTGCACTAAAAAACCACGTAAGAGCGTGTGCCCTCAAGTGGAGTTAATAAGTTAATAAATCTAAGGTTGATATGTTGGAGGTGATAAGTTTTTGTTCGGAGTGTGGAACAAAAGTTACTCAATAATTGTGAAAAGTAGATTAAGACGAAGTTATTTGGTAAATGTGAAAACTAGAGATAAAAAGGGAAAGATGAAGTTCTTTAGTAAATGTAGAAAGTACTGAAAAATACTAAGATGAATTTACTTAAAAAGTATTAAAAAAATACAACATAAACTGAGTTGTTTATACCTACCTAACAAGTCTGCAAGTCAAACAATCCTATAATGTTTAGGGCAAGGAGTGAAGTTGTTTAGTCTAAAAAGATATCTCATTGGTTGTTTGGTTGTGGTGTCCACAATGTACGTAGTTTAATAAGTCATGAAAGTGTGTTCAAGGTACAAACTATTTTAGTTTGATTATTCGTAAGTACTCGAGTTAACTTACGATTAATCTCACAGAATATCTTATCTAACCCTATAATATTTGAGTGTCAATTAGGATACCATATCACAAGTAGGTGACCACCATAGGTTGAACCAACCTCTTTGTCTTGTATCAAGGTCATACCTCCATATTTATGACTAGGCCAACTTATGATTGGTTAATAATATTATAGTTAATTGTAAGTTAATAAGAATTAAAAACAACGTCTAAAATTGGTCTAAAATTGGAGTTCTAAACATAAAATGAGCTATAATAGTACACTCTACCTATACCCCTAATCCTCTCTCTGCCATGGTGGAAGAAATATTGAAGAATCGTGGTTTATTTGCAGTTACAATGGCACTCGTGCATATGCTCAATCAAAACTAGCCAATATCTTGCATGCTAAGGAACTATCAAGGCAACTTCAGGTAGAGTCTTCCAGTATCATTTCGCATTCTTCCTTATTCAATAAAATGAACCCTCAACCTTATTCCTAAAAGTATCAAATTCTTCAAATACTCAGCTAGCTAACAATTCTAAGAAACATAAGCAATTAAATGAGAAATTGAAAAGAATTCAGTGACTCACCCGAGGTCTTTTTGGTGGGGTGGCAGGGAAGAAATGCCAGAGTCACCATAAATGCAGTTCATCCAGGAATTGTAAAAACTGCCATCATTAGAGCTCACAAGGGCTTTATCACAGGTAGATGTTATAGTATTTCCTGCAACTTCACTGTTAACTTGTTTCTTATGCATATGAATAATGTAAAGCATTCACCCTTCAACACGAGCAAGAGGGCAACTGACTTCTCAAACTTTCCTGTGCAGATTCATTGTTTTTTATGGCATCAAAGTTACTTAAAACTACAAGTCAGGTATGATTAATCATCAGAAGCAACCCCCAACACCATTAATGATTGATTTAACTCACAAAATACATAAAATGGCTATGCAGGGAGCATCAACAACATGCTACGTAGCACTGAGTTCGCAAACAGAAGGAAAGAGTGGAAAATTTTACGCAGATTGTAACGAGACTAACTGCTCATCCTTAGCCAATGATGAGTTAGAAGCACAAAAGTTATGGACTCAAACTCGCAACTTAATCAATAGACGACTAAGCAAACTTCCCTCCTAGTCAAATATTATTCAACATTTTGTAAAAAAATCTAGGTTTAGATGTAATGAGCATAAGTTTGTCATTAAACAGTTATATAGATAGAAAGTCAATTTAATGAATACCTGAAAGATACAGGGGCTAGAAAGTCTTCCCCCTTCAGCCCTATTCAAATAATGTATTACTCAACCTACAGTAAAGTCAAATAATATCAATAGGCAGTGTAAAATATTTTGCTTTCAGGAAATTCCCTGCAAAAAGAGCAACAAAGCAGACAATGATTGAAAACCTACTAATTAAAGAATGTAAATCACATCGTTATACACTAACTTAATTTCATAGAAAAGTGAACATTCAGTGTTTCACCTTCAAGCTTTCACAATTAATTAATTTAAAACTGCACAAACCTTAACTTAAGTCCGATGATGTGGAACCTAGAACAGATCAGATTGATACAAAGTACTGGCATTCGGTACATTTGGGATAATCACCCCATGCATTACATGAAAACCATAACTTCGTGTAAAATAATACACAAAAACAAATCAGATACAACGAACATACAACAGGTCATGGATAAAGCCTTCTTCAACTTCACTTTTATGATATGGACCCTTCAGAGTAGTCAGAGAAGTTCTGGAAAATGTTGAGATCAGGACCCATAATGGCATAATCAACGTTAATTGCAAAGCAATTCATGTCATGGAAGCAAAAGGCTAAGCCCATCAACCTAATACTTGTTCAATCATTAACAGCCTCCAACCTTATTTCCTGACCT

mRNA sequence

ATGGTATTTTCAGTTTCCATTATTCTAAGTTTGGGAAAACTTATGAAGGATACTCTTAGATACTTAGCAGGAATTCCAGGCCCCAGTGGCTATGGCTCCAAATCTACTGCTGAACAAGTCTCTCTATTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTACTTCTCAACTTACTGCCATTATCACTGGGGCAACATCAGGAATTGGGGCAGAAACAGCAAGAGTATTGGCAAAGAGAGGAGTGAAAATAGTGATGACAGCAAGAGACTTGAAAAAAGCAGCTCAAGTTAAAGAAGCAATTCAAAAAGAAAGCCCTGAGGCTGAGATTATTGTGTTTGAAATCGATCTCAGTTCATTGGCTTCTGTCCAAAGCTTTTGTAATCAGTTTCTTTCTCTTGGACTCCCACTTAACATTCTCATAAATAATGCTGGAGTCTTCTCCAAGAATTTGGAGTTCTCTGAAGACAAAGTTGAGTTGACATTTGCAACAAATTATTTGGGACATTATTTACTAACAGAGAGGCTGTTAGAGAAAATGATAGAAACAGCAGCCAAGACAGGAATTGAAGGAAGGATTATCAACGTTTCATCGGTGGTTCATGGCTGGGTGAAGAAAGATGGTTTAAGCTTTCGTCAAATGCTCAACCCAAACAGTTACAATGGCACTCGTGCATATGCTCAATCAAAACTAGCCAATATCTTGCATGCTAAGGAACTATCAAGGCAACTTCAGGGAAGAAATGCCAGAGTCACCATAAATGCAGTTCATCCAGGAATTGTAAAAACTGCCATCATTAGAGCTCACAAGGGCTTTATCACAGATTCATTGTTTTTTATGGCATCAAAGTTACTTAAAACTACAAGTCAGGGAGCATCAACAACATGCTACGTAGCACTGAGTTCGCAAACAGAAGGAAAGAGTGGAAAATTTTACGCAGATTGTAACGAGACTAACTGCTCATCCTTAGCCAATGATGAGTTAGAAGCACAAAAGTTATGGACTCAAACTCGCAACTTAATCAATAGACGACTAAGCAAACTTCCCTCCTAG

Coding sequence (CDS)

ATGGTATTTTCAGTTTCCATTATTCTAAGTTTGGGAAAACTTATGAAGGATACTCTTAGATACTTAGCAGGAATTCCAGGCCCCAGTGGCTATGGCTCCAAATCTACTGCTGAACAAGTCTCTCTATTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTACTTCTCAACTTACTGCCATTATCACTGGGGCAACATCAGGAATTGGGGCAGAAACAGCAAGAGTATTGGCAAAGAGAGGAGTGAAAATAGTGATGACAGCAAGAGACTTGAAAAAAGCAGCTCAAGTTAAAGAAGCAATTCAAAAAGAAAGCCCTGAGGCTGAGATTATTGTGTTTGAAATCGATCTCAGTTCATTGGCTTCTGTCCAAAGCTTTTGTAATCAGTTTCTTTCTCTTGGACTCCCACTTAACATTCTCATAAATAATGCTGGAGTCTTCTCCAAGAATTTGGAGTTCTCTGAAGACAAAGTTGAGTTGACATTTGCAACAAATTATTTGGGACATTATTTACTAACAGAGAGGCTGTTAGAGAAAATGATAGAAACAGCAGCCAAGACAGGAATTGAAGGAAGGATTATCAACGTTTCATCGGTGGTTCATGGCTGGGTGAAGAAAGATGGTTTAAGCTTTCGTCAAATGCTCAACCCAAACAGTTACAATGGCACTCGTGCATATGCTCAATCAAAACTAGCCAATATCTTGCATGCTAAGGAACTATCAAGGCAACTTCAGGGAAGAAATGCCAGAGTCACCATAAATGCAGTTCATCCAGGAATTGTAAAAACTGCCATCATTAGAGCTCACAAGGGCTTTATCACAGATTCATTGTTTTTTATGGCATCAAAGTTACTTAAAACTACAAGTCAGGGAGCATCAACAACATGCTACGTAGCACTGAGTTCGCAAACAGAAGGAAAGAGTGGAAAATTTTACGCAGATTGTAACGAGACTAACTGCTCATCCTTAGCCAATGATGAGTTAGAAGCACAAAAGTTATGGACTCAAACTCGCAACTTAATCAATAGACGACTAAGCAAACTTCCCTCCTAG

Protein sequence

MVFSVSIILSLGKLMKDTLRYLAGIPGPSGYGSKSTAEQVSLFPSSSSSSSSSSSSSSSSSTSQLTAIITGATSGIGAETARVLAKRGVKIVMTARDLKKAAQVKEAIQKESPEAEIIVFEIDLSSLASVQSFCNQFLSLGLPLNILINNAGVFSKNLEFSEDKVELTFATNYLGHYLLTERLLEKMIETAAKTGIEGRIINVSSVVHGWVKKDGLSFRQMLNPNSYNGTRAYAQSKLANILHAKELSRQLQGRNARVTINAVHPGIVKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNETNCSSLANDELEAQKLWTQTRNLINRRLSKLPS

Homology

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BLAST of CsaV3_1G001280 vs. NCBI nr
Match: XP_004138098.2 (PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Cucumis sativus])

HSP 1 Score: 615.1 bits (1585), Expect = 1.5e-172
Identity = 353/357 (98.88%), Postives = 353/357 (98.88%), Query Frame = 0


Query: 1   MVFSVSIILSLGKLMKDTLRYLAGIPGPSGYGSKSTAEQVSLFPSXXXXXXXXXXXXXXX 60
           MVFSVSIILSLGKLMKDTLRYLAGIPGPSGYGSKSTAEQVSLFPS XXXXXXXXXXXXXX
Sbjct: 1   MVFSVSIILSLGKLMKDTLRYLAGIPGPSGYGSKSTAEQVSLFPS-XXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXATSGIGAETARVLAKRGVKIVMTARDLKKAAQVKEAIQKESPEAEIIVF 120
           XXXXXXXX   ATSGIGAETARVLAKRGVKIVMTARDLKKAAQVKEAIQKESPEAEIIVF
Sbjct: 61  XXXXXXXXITGATSGIGAETARVLAKRGVKIVMTARDLKKAAQVKEAIQKESPEAEIIVF 120

Query: 121 EIDLSSLASVQSFCNQFLSLGLPLNILINNAGVFSKNLEFSEDKVELTFATNYLGHYLLT 180
           EIDLSSLASVQSFCNQFLSLGLPLNILINNAGVFSKNLEFSEDKVELTFATNYLGHYLLT
Sbjct: 121 EIDLSSLASVQSFCNQFLSLGLPLNILINNAGVFSKNLEFSEDKVELTFATNYLGHYLLT 180

Query: 181 ERLLEKMIETAAKTGIEGRIINVSSVVHGWVKKDGLSFRQMLNPNSYNGTRAYAQSKLAN 240
           ERLLEKMIETAAKTGIEGRIINVSSVVHGWVKKDGLSFRQMLNPNSYNGTRAYAQSKLAN
Sbjct: 181 ERLLEKMIETAAKTGIEGRIINVSSVVHGWVKKDGLSFRQMLNPNSYNGTRAYAQSKLAN 240

Query: 241 ILHAKELSRQLQGRNARVTINAVHPGIVKTAIIRAHKGFITDSLFFMASKLLKTTSQGAS 300
           ILHAKELSRQLQGRNARVTINAVHPGIVKTAIIRAHKGFITDSLFFMASKLLKTTSQGAS
Sbjct: 241 ILHAKELSRQLQGRNARVTINAVHPGIVKTAIIRAHKGFITDSLFFMASKLLKTTSQGAS 300

Query: 301 TTCYVALSSQTEGKSGKFYADCNETNCSSLANDELEAQKLWTQTRNLINRRLSKLPS 358
           TTCYVALSSQTEGKSGKFYADCNETNCSSLANDELEAQKLWTQTRNLINRRLSKLPS
Sbjct: 301 TTCYVALSSQTEGKSGKFYADCNETNCSSLANDELEAQKLWTQTRNLINRRLSKLPS 356

[Close]

BLAST of CsaV3_1G001280 vs. NCBI nr
Match: XP_008464537.1 (PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Cucumis melo])

HSP 1 Score: 610.1 bits (1572), Expect = 4.7e-171
Identity = 329/357 (92.16%), Postives = 329/357 (92.16%), Query Frame = 0


Query: 1   MVFSVSIILSLGKLMKDTLRYLAGIPGPSGYGSKSTAEQVSLFPSXXXXXXXXXXXXXXX 60
           MVFSVSIILSLGKLMKDTLRYLAGIPGPSGYGSKSTAEQVSLF S               
Sbjct: 20  MVFSVSIILSLGKLMKDTLRYLAGIPGPSGYGSKSTAEQVSLFSS-------------SS 79

Query: 61  XXXXXXXXXXXATSGIGAETARVLAKRGVKIVMTARDLKKAAQVKEAIQKESPEAEIIVF 120
                      ATSGIGAETARVLAKRGVKIVMTARDLKKAAQVKEAIQKESPEAEIIVF
Sbjct: 80  SSSQLTAIITGATSGIGAETARVLAKRGVKIVMTARDLKKAAQVKEAIQKESPEAEIIVF 139

Query: 121 EIDLSSLASVQSFCNQFLSLGLPLNILINNAGVFSKNLEFSEDKVELTFATNYLGHYLLT 180
           EIDLSSLASVQSFCNQFLSLGLPLNILINNAGVFSKNLEFSEDKVELTFATNYLGHYLLT
Sbjct: 140 EIDLSSLASVQSFCNQFLSLGLPLNILINNAGVFSKNLEFSEDKVELTFATNYLGHYLLT 199

Query: 181 ERLLEKMIETAAKTGIEGRIINVSSVVHGWVKKDGLSFRQMLNPNSYNGTRAYAQSKLAN 240
           ERLLEKMIETAAKTGIEGRIINVSSVVHGWVKKDGLSFRQMLNPN YNGTRAYAQSKLAN
Sbjct: 200 ERLLEKMIETAAKTGIEGRIINVSSVVHGWVKKDGLSFRQMLNPNRYNGTRAYAQSKLAN 259

Query: 241 ILHAKELSRQLQGRNARVTINAVHPGIVKTAIIRAHKGFITDSLFFMASKLLKTTSQGAS 300
           ILHAKELSRQLQGRNARVTINAVHPGIVKTAIIRAHKGFITDSLFFMASKLLKTTSQGAS
Sbjct: 260 ILHAKELSRQLQGRNARVTINAVHPGIVKTAIIRAHKGFITDSLFFMASKLLKTTSQGAS 319

Query: 301 TTCYVALSSQTEGKSGKFYADCNETNCSSLANDELEAQKLWTQTRNLINRRLSKLPS 358
           TTCYVALSSQTEGKSGKFYADCNETNCSSLANDELEAQKLWTQTRNLINRRLSKLPS
Sbjct: 320 TTCYVALSSQTEGKSGKFYADCNETNCSSLANDELEAQKLWTQTRNLINRRLSKLPS 363

[Close]

BLAST of CsaV3_1G001280 vs. NCBI nr
Match: KGN63555.1 (hypothetical protein Csa_1G004220 [Cucumis sativus])

HSP 1 Score: 592.8 bits (1527), Expect = 7.7e-166
Identity = 339/343 (98.83%), Postives = 339/343 (98.83%), Query Frame = 0


Query: 15  MKDTLRYLAGIPGPSGYGSKSTAEQVSLFPSXXXXXXXXXXXXXXXXXXXXXXXXXXATS 74
           MKDTLRYLAGIPGPSGYGSKSTAEQVSLFPS XXXXXXXXXXXXXXXXXXXXXX   ATS
Sbjct: 1   MKDTLRYLAGIPGPSGYGSKSTAEQVSLFPS-XXXXXXXXXXXXXXXXXXXXXXITGATS 60

Query: 75  GIGAETARVLAKRGVKIVMTARDLKKAAQVKEAIQKESPEAEIIVFEIDLSSLASVQSFC 134
           GIGAETARVLAKRGVKIVMTARDLKKAAQVKEAIQKESPEAEIIVFEIDLSSLASVQSFC
Sbjct: 61  GIGAETARVLAKRGVKIVMTARDLKKAAQVKEAIQKESPEAEIIVFEIDLSSLASVQSFC 120

Query: 135 NQFLSLGLPLNILINNAGVFSKNLEFSEDKVELTFATNYLGHYLLTERLLEKMIETAAKT 194
           NQFLSLGLPLNILINNAGVFSKNLEFSEDKVELTFATNYLGHYLLTERLLEKMIETAAKT
Sbjct: 121 NQFLSLGLPLNILINNAGVFSKNLEFSEDKVELTFATNYLGHYLLTERLLEKMIETAAKT 180

Query: 195 GIEGRIINVSSVVHGWVKKDGLSFRQMLNPNSYNGTRAYAQSKLANILHAKELSRQLQGR 254
           GIEGRIINVSSVVHGWVKKDGLSFRQMLNPNSYNGTRAYAQSKLANILHAKELSRQLQGR
Sbjct: 181 GIEGRIINVSSVVHGWVKKDGLSFRQMLNPNSYNGTRAYAQSKLANILHAKELSRQLQGR 240

Query: 255 NARVTINAVHPGIVKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGK 314
           NARVTINAVHPGIVKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGK
Sbjct: 241 NARVTINAVHPGIVKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGK 300

Query: 315 SGKFYADCNETNCSSLANDELEAQKLWTQTRNLINRRLSKLPS 358
           SGKFYADCNETNCSSLANDELEAQKLWTQTRNLINRRLSKLPS
Sbjct: 301 SGKFYADCNETNCSSLANDELEAQKLWTQTRNLINRRLSKLPS 342

[Close]

BLAST of CsaV3_1G001280 vs. NCBI nr
Match: XP_022988395.1 (short-chain dehydrogenase TIC 32, chloroplastic-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 567.8 bits (1462), Expect = 2.7e-158
Identity = 306/355 (86.20%), Postives = 318/355 (89.58%), Query Frame = 0


Query: 1   MVFSVSIILSLGKLMKDTLRYLAGIPGPSGYGSKSTAEQVSLFPSXXXXXXXXXXXXXXX 60
           MVFSVSIILSLGKLMKDTLRYLAGI GPSGYGSKSTAEQV+   S               
Sbjct: 3   MVFSVSIILSLGKLMKDTLRYLAGIAGPSGYGSKSTAEQVTQCSS-------------FS 62

Query: 61  XXXXXXXXXXXATSGIGAETARVLAKRGVKIVMTARDLKKAAQVKEAIQKESPEAEIIVF 120
                      ATSGIGAETARVLAKRGV+IVM ARD+KKAAQVKEAIQ+ESPEAEIIV 
Sbjct: 63  STSQLTAIITGATSGIGAETARVLAKRGVRIVMPARDMKKAAQVKEAIQRESPEAEIIVC 122

Query: 121 EIDLSSLASVQSFCNQFLSLGLPLNILINNAGVFSKNLEFSEDKVELTFATNYLGHYLLT 180
           EIDLSSLASVQSFCN FL+L LPLNILINNAGVFSKNLEFSEDKVELTFATNYLGHY LT
Sbjct: 123 EIDLSSLASVQSFCNHFLALRLPLNILINNAGVFSKNLEFSEDKVELTFATNYLGHYFLT 182

Query: 181 ERLLEKMIETAAKTGIEGRIINVSSVVHGWVKKDGLSFRQMLNPNSYNGTRAYAQSKLAN 240
           E LLEKMIETAA+TGIEGRIINVSSVVHGWVKKDGLSF QMLNPN+YNGTRAYAQSKLAN
Sbjct: 183 ETLLEKMIETAAQTGIEGRIINVSSVVHGWVKKDGLSFGQMLNPNNYNGTRAYAQSKLAN 242

Query: 241 ILHAKELSRQLQGRNARVTINAVHPGIVKTAIIRAHKGFITDSLFFMASKLLKTTSQGAS 300
           ILHAKE+SRQLQGRNARVTINAVHPGIVKTAIIRAHKGFITDSLFFMASKLLKTTSQGAS
Sbjct: 243 ILHAKEVSRQLQGRNARVTINAVHPGIVKTAIIRAHKGFITDSLFFMASKLLKTTSQGAS 302

Query: 301 TTCYVALSSQTEGKSGKFYADCNETNCSSLANDELEAQKLWTQTRNLINRRLSKL 356
           TTCYVALSSQTEGKSGKFYADCNETNCSSLANDE+EAQKLWT+TRNLIN++LSKL
Sbjct: 303 TTCYVALSSQTEGKSGKFYADCNETNCSSLANDEIEAQKLWTRTRNLINKQLSKL 344

[Close]

BLAST of CsaV3_1G001280 vs. NCBI nr
Match: XP_022921530.1 (short-chain dehydrogenase TIC 32, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 567.0 bits (1460), Expect = 4.5e-158
Identity = 305/355 (85.92%), Postives = 317/355 (89.30%), Query Frame = 0


Query: 1   MVFSVSIILSLGKLMKDTLRYLAGIPGPSGYGSKSTAEQVSLFPSXXXXXXXXXXXXXXX 60
           MVFSVSIILSLGKLMKDTLRYLAGI GPSGYGSKSTAEQV+   S               
Sbjct: 3   MVFSVSIILSLGKLMKDTLRYLAGIAGPSGYGSKSTAEQVTQCSS-------------FS 62

Query: 61  XXXXXXXXXXXATSGIGAETARVLAKRGVKIVMTARDLKKAAQVKEAIQKESPEAEIIVF 120
                      ATSGIGAETARVLAKRGV+IVM ARD+KKAAQVKEAIQ+ESPEAEIIV 
Sbjct: 63  STSQLTAIITGATSGIGAETARVLAKRGVRIVMPARDMKKAAQVKEAIQRESPEAEIIVC 122

Query: 121 EIDLSSLASVQSFCNQFLSLGLPLNILINNAGVFSKNLEFSEDKVELTFATNYLGHYLLT 180
           EIDLSSLASVQSFCN FL+L LPLNILINNAGVFSKNLEFSEDKVELTFATNYLGHY LT
Sbjct: 123 EIDLSSLASVQSFCNHFLALRLPLNILINNAGVFSKNLEFSEDKVELTFATNYLGHYFLT 182

Query: 181 ERLLEKMIETAAKTGIEGRIINVSSVVHGWVKKDGLSFRQMLNPNSYNGTRAYAQSKLAN 240
           E LLEKMIETA KTGIEGRIIN+SSVVHGWVKKDGL+F QMLNPN+YNGTRAYAQSKLAN
Sbjct: 183 ETLLEKMIETATKTGIEGRIINISSVVHGWVKKDGLNFGQMLNPNNYNGTRAYAQSKLAN 242

Query: 241 ILHAKELSRQLQGRNARVTINAVHPGIVKTAIIRAHKGFITDSLFFMASKLLKTTSQGAS 300
           ILHAKE+SRQLQGRNARVTINAVHPGIVKTAIIRAHKGFITDSLFFMASKLLKTTSQGAS
Sbjct: 243 ILHAKEVSRQLQGRNARVTINAVHPGIVKTAIIRAHKGFITDSLFFMASKLLKTTSQGAS 302

Query: 301 TTCYVALSSQTEGKSGKFYADCNETNCSSLANDELEAQKLWTQTRNLINRRLSKL 356
           TTCYVALSSQTEGKSGKFYADCNETNCSSLANDELEAQKLWT+TRNLIN++LSKL
Sbjct: 303 TTCYVALSSQTEGKSGKFYADCNETNCSSLANDELEAQKLWTRTRNLINKQLSKL 344

[Close]

BLAST of CsaV3_1G001280 vs. TAIR10
Match: AT5G50130.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 431.4 bits (1108), Expect = 5.4e-121
Identity = 235/342 (68.71%), Postives = 270/342 (78.95%), Query Frame = 0


Query: 15  MKDTLRYLAGIPGPSGYGSKSTAEQV---SLFPSXXXXXXXXXXXXXXXXXXXXXXXXXX 74
           MK TLRYLAGI GP+G+GS+STAEQV   S FP                           
Sbjct: 1   MKGTLRYLAGIAGPNGFGSRSTAEQVTQHSFFP-----------------CSHLTAIITG 60

Query: 75  ATSGIGAETARVLAKRGVKIVMTARDLKKAAQVKEAIQKESPEAEIIVFEIDLSSLASVQ 134
            TSGIGAETARVLAKRGV++VM  RD+KKA  VKE I +E+PEA+II+FEIDLSSL+SV 
Sbjct: 61  GTSGIGAETARVLAKRGVRVVMAVRDMKKAEMVKERIIRENPEADIILFEIDLSSLSSVA 120

Query: 135 SFCNQFLSLGLPLNILINNAGVFSKNLEFSEDKVELTFATNYLGHYLLTERLLEKMIETA 194
            FC+QFLS  LPLNILINNAGVFS NLEFSE+K+ELTFATN+LGHYLLTE L+EKMI+TA
Sbjct: 121 RFCSQFLSQDLPLNILINNAGVFSPNLEFSEEKIELTFATNFLGHYLLTEMLIEKMIDTA 180

Query: 195 AKTGIEGRIINVSSVVHGWVKKDGLSFRQMLNPNS-YNGTRAYAQSKLANILHAKELSRQ 254
            K+GIEGRIIN+SSV+H WVK D  SF ++L+P S YNGTRAYAQSKLA ILHAK LS+Q
Sbjct: 181 EKSGIEGRIINLSSVIHNWVKPDCFSFPKLLHPISRYNGTRAYAQSKLATILHAKALSKQ 240

Query: 255 LQGRNARVTINAVHPGIVKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQ 314
           L+ RNA VTINAVHPGIVKT IIRAHKG  TDSLF +ASKLLK+ SQGA+TTCYVALS++
Sbjct: 241 LKDRNANVTINAVHPGIVKTGIIRAHKGLFTDSLFLIASKLLKSISQGAATTCYVALSNE 300

Query: 315 TEGKSGKFYADCNETNCSSLANDELEAQKLWTQTRNLINRRL 353
           T+G SGK++ADCNETNCS LANDE  A KL TQ+R LI+  L
Sbjct: 301 TKGLSGKYFADCNETNCSDLANDEYVALKLCTQSRALIHDHL 325

[Close]

BLAST of CsaV3_1G001280 vs. TAIR10
Match: AT1G64590.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 310.5 bits (794), Expect = 1.4e-84
Identity = 172/337 (51.04%), Postives = 224/337 (66.47%), Query Frame = 0


Query: 15  MKDTLRYLAGIPGPSGYGSKSTAEQVSLFPSXXXXXXXXXXXXXXXXXXXXXXXXXXATS 74
           M +T+++L G  GPSG+GS+STA+ V+                              ATS
Sbjct: 1   MIETVKHLIGSGGPSGFGSRSTADHVT----------------CNSDLRSLTAIITGATS 60

Query: 75  GIGAETARVLAKRGVKIVMTARDLKKAAQVKEAIQKESPEAEIIVFEIDLSSLASVQSFC 134
           GIGAETARVLAKRG ++V+ AR +K A + K  I  E P+AEIIV  +DLSSL SV+ F 
Sbjct: 61  GIGAETARVLAKRGARLVLPARSVKTAEETKARILSEFPDAEIIVMHLDLSSLTSVRRFV 120

Query: 135 NQFLSLGLPLNILINNAGVFSKNLEFSEDKVELTFATNYLGHYLLTERLLEKMIETAAKT 194
           + F SL LPLNILINNAG ++     SED VE+TFATNYLGH+LLT+ LL+KMIETAA+T
Sbjct: 121 DDFESLNLPLNILINNAGKYAHKHALSEDGVEMTFATNYLGHFLLTKLLLKKMIETAAQT 180

Query: 195 GIEGRIINVSSVVHGWVKKDGLSFRQMLNPN--SYNGTRAYAQSKLANILHAKELSRQLQ 254
           G++GRI+NV+SVVH W   D L +   ++ N  +Y+ TRAYA SKLAN+LH  ELSR L 
Sbjct: 181 GVQGRIVNVTSVVHSWFSGDMLQYLADISRNNRNYDATRAYALSKLANVLHTVELSRLLH 240

Query: 255 GRNARVTINAVHPGIVKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTE 314
             +A VT N VHPGIVKT + R  +G +TD +FF+ SKLLK+  Q A+TTCYVA S +  
Sbjct: 241 KMDANVTANCVHPGIVKTRLTRDREGVVTDLVFFLTSKLLKSVPQAAATTCYVATSPRLR 300

Query: 315 GKSGKFYADCNETNCSSLANDELEAQKLWTQTRNLIN 350
              GK+++DCNE   S   +  L+AQ+LWT +  L++
Sbjct: 301 NVCGKYFSDCNEARSSKSGSCNLKAQRLWTASDLLVS 321

[Close]

BLAST of CsaV3_1G001280 vs. TAIR10
Match: AT4G24050.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 307.8 bits (787), Expect = 9.0e-84
Identity = 166/338 (49.11%), Postives = 223/338 (65.98%), Query Frame = 0


Query: 15  MKDTLRYLAGIPGPSGYGSKSTAEQVSLFPSXXXXXXXXXXXXXXXXXXXXXXXXXXATS 74
           M +T +YL G  G SG+GSKSTAE+V+                              ATS
Sbjct: 1   MIETGKYLLGAAGASGFGSKSTAEEVT----------------ENCDLRSITAVITGATS 60

Query: 75  GIGAETARVLAKRGVKIVMTARDLKKAAQVKEAIQKESPEAEIIVFEIDLSSLASVQSFC 134
           GIGAETARVLAKRG +++  AR++K A + KE I  E PE EI+V ++DLSS+ASV++F 
Sbjct: 61  GIGAETARVLAKRGARLIFPARNVKAAEEAKERIVSEFPETEIVVMKLDLSSIASVRNFV 120

Query: 135 NQFLSLGLPLNILINNAGVFSKNLEFSEDKVELTFATNYLGHYLLTERLLEKMIETAAKT 194
             F SL LPLN+LINNAG  +     SED +E+TFATNYLGH+LLT  LL KMI+TA +T
Sbjct: 121 ADFESLDLPLNLLINNAGKLAHEHAISEDGIEMTFATNYLGHFLLTNLLLNKMIQTAEET 180

Query: 195 GIEGRIINVSSVVHGWVKKDGLSFRQMLNPN--SYNGTRAYAQSKLANILHAKELSRQLQ 254
           G++GRI+NV+S +HGW   D + + ++++     ++ TRAYA SKLAN+LH KELS +LQ
Sbjct: 181 GVQGRIVNVTSGIHGWFSGDLIEYLRLISQPKCQFDATRAYALSKLANVLHTKELSSRLQ 240

Query: 255 GRNARVTINAVHPGIVKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTE 314
              A VT+N VHPG+V+T + R  +G +TD +FF+ASKL+KT  Q A+TTCYVA + +  
Sbjct: 241 KIGANVTVNCVHPGVVRTRLTRDREGLLTDLVFFLASKLVKTVPQAAATTCYVATNPRLV 300

Query: 315 GKSGKFYADCNETNCSSLANDELEAQKLWTQTRNLINR 351
             SGK++ DCNET  S L  +  EA KLW  +  L+ +
Sbjct: 301 NVSGKYFTDCNETTPSGLGTNSSEATKLWAASEILVTQ 322

[Close]

BLAST of CsaV3_1G001280 vs. TAIR10
Match: AT5G02540.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 260.4 bits (664), Expect = 1.6e-69
Identity = 148/328 (45.12%), Postives = 201/328 (61.28%), Query Frame = 0


Query: 22  LAGIPGPSGYGSKSTAEQVSLFPSXXXXXXXXXXXXXXXXXXXXXXXXXXATSGIGAETA 81
           + G  GPSG+GS STAE+V+                               T GIG ETA
Sbjct: 7   ITGRRGPSGFGSASTAEEVT----------------QGIDATNLTAIITGGTGGIGMETA 66

Query: 82  RVLAKRGVKIVMTARDLKKAAQVKEAIQKESPEAEIIVFEIDLSSLASVQSFCNQFLSLG 141
           RVL+KRG  +V+ AR++  A   K  I +++  A + + ++DLSS+ S+++F  +F +L 
Sbjct: 67  RVLSKRGAHVVIGARNMGAAENAKTEILRQNANARVTLLQLDLSSIKSIKAFVREFHALH 126

Query: 142 LPLNILINNAGVFSKNLEFSEDKVELTFATNYLGHYLLTERLLEKMIETAAKTGIEGRII 201
           LPLN+LINNAGV     + SED +EL FATN++GH+LLT  LL+ M  TA  +G+EGRI+
Sbjct: 127 LPLNLLINNAGVMFCPYQLSEDGIELQFATNHIGHFLLTNLLLDTMKNTAKTSGVEGRIL 186

Query: 202 NVSSVVHGWVKKDGLSFRQMLNPNSYNGTRAYAQSKLANILHAKELSRQLQGRNARVTIN 261
           NVSSV H +  ++G+ F  + +  SY+  RAY QSKLANILHA ELSRQLQ     +T N
Sbjct: 187 NVSSVAHIYTYQEGIQFDSINDICSYSDKRAYGQSKLANILHANELSRQLQEEGVNITAN 246

Query: 262 AVHPGIVKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYAD 321
           +VHPG++ T + + H   +   L F +  L K   QGA+TTCYVAL    +G +GK++AD
Sbjct: 247 SVHPGLILTNLFQ-HTALLMRFLKFFSFYLWKNIPQGAATTCYVALHPSVKGVTGKYFAD 306

Query: 322 CNETNCSSLANDELEAQKLWTQTRNLIN 350
           CNE   S LA DE  AQKLW  +  LIN
Sbjct: 307 CNEVTPSKLARDETLAQKLWDFSVKLIN 317

[Close]

BLAST of CsaV3_1G001280 vs. TAIR10
Match: AT2G37540.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 243.8 bits (621), Expect = 1.6e-64
Identity = 138/320 (43.12%), Postives = 191/320 (59.69%), Query Frame = 0


Query: 22  LAGIPGPSGYGSKSTAEQVSLFPSXXXXXXXXXXXXXXXXXXXXXXXXXXATSGIGAETA 81
           + G  G SG+GS STAE V+                               TSGIG E A
Sbjct: 7   MTGKKGKSGFGSASTAEDVT----------------QAIDASHLTAIITGGTSGIGLEAA 66

Query: 82  RVLAKRGVKIVMTARDLKKAAQVKEAIQKESPEAEIIVFEIDLSSLASVQSFCNQFLSLG 141
           RVLA RG  +++ AR+ K A + KE I + +P A +   +ID+SS+ SV+SF +QFL+L 
Sbjct: 67  RVLAMRGAHVIIAARNPKAANESKEMILQMNPNARVDYLQIDVSSIKSVRSFVDQFLALN 126

Query: 142 LPLNILINNAGVFSKNLEFSEDKVELTFATNYLGHYLLTERLLEKMIETAAKTGIEGRII 201
           +PLNILINNAGV     + +ED +E  FATN++GH+LLT  LL+KM  TA ++G++GRI+
Sbjct: 127 VPLNILINNAGVMFCPFKLTEDGIESQFATNHIGHFLLTNLLLDKMKSTARESGVQGRIV 186

Query: 202 NVSSVVHGWVKKDGLSFRQMLNPNSYNGTRAYAQSKLANILHAKELSRQLQGRNARVTIN 261
           N+SS+ H +   +G+ F+ + +P  Y+  RAY QSKL+N+LH+  LSR+LQ     +TIN
Sbjct: 187 NLSSIAHTYTYSEGIKFQGINDPAGYSERRAYGQSKLSNLLHSNALSRRLQEEGVNITIN 246

Query: 262 AVHPGIVKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYAD 321
           +VHPG+V T + R + GF       M     K   QGA+TTCYVAL    EG +GK++ D
Sbjct: 247 SVHPGLVTTNLFR-YSGFSMKVFRAMTFLFWKNIPQGAATTCYVALHPDLEGVTGKYFGD 306

Query: 322 CNETNCSSLANDELEAQKLW 342
           CN    S  A +   A KLW
Sbjct: 307 CNIVAPSKFATNNSLADKLW 309

[Close]

BLAST of CsaV3_1G001280 vs. Swiss-Prot
Match: sp|A2RVM0|TIC32_ARATH (Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC32 PE=2 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 2.3e-60
Identity = 132/318 (41.51%), Postives = 195/318 (61.32%), Query Frame = 0


Query: 24  GIPGPSGYGSKSTAEQVSLFPSXXXXXXXXXXXXXXXXXXXXXXXXXXATSGIGAETARV 83
           G  G SG+ S+STAE+V+                              A+SGIG ETARV
Sbjct: 5   GSKGASGFSSRSTAEEVT----------------HGVDGTGLTAIVTGASSGIGVETARV 64

Query: 84  LAKRGVKIVMTARDLKKAAQVKEAIQKESPEAEIIVFEIDLSSLASVQSFCNQFLSLGLP 143
           L+ RGV +VM  R+    A+VKE I K+ P A++ V E+DLSS+ SV+ F +++ S GLP
Sbjct: 65  LSLRGVHVVMAVRNTDSGAKVKEDIVKQVPGAKLDVMELDLSSMQSVRKFASEYKSTGLP 124

Query: 144 LNILINNAGVFSKNLEFSEDKVELTFATNYLGHYLLTERLLEKMIETAAKTGIEGRIINV 203
           LN+LINNAG+ +     S+D +EL FATN+LGH+LLT+ LL+ M  T+ ++  EGRI+N+
Sbjct: 125 LNLLINNAGIMACPFMLSKDNIELQFATNHLGHFLLTKLLLDTMKSTSRESKREGRIVNL 184

Query: 204 SSVVHGWVKKDGLSFRQMLNPNSYNGTRAYAQSKLANILHAKELSRQLQGRNARVTINAV 263
           SS  H +   +G+ F ++ + +SY+  RAY QSKL N+LHA EL++QL+     +T N++
Sbjct: 185 SSEAHRFSYPEGVRFDKINDKSSYSSMRAYGQSKLCNVLHANELTKQLKEDGVNITANSL 244

Query: 264 HPGIVKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCN 323
           HPG + T + R    ++  ++  +A  +LK+  QGA+TTCYVAL+ Q  G SG+++ D N
Sbjct: 245 HPGAIMTNLGRYFNPYLAVAVGAVAKYILKSVPQGAATTCYVALNPQVAGVSGEYFQDSN 304

Query: 324 ETNCSSLANDELEAQKLW 342
                 L  D   A+K+W
Sbjct: 305 IAKPLPLVKDTELAKKVW 306

[Close]

BLAST of CsaV3_1G001280 vs. Swiss-Prot
Match: sp|Q6RVV4|TIC32_PEA (Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum OX=3888 GN=TIC32 PE=1 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.9e-59
Identity = 131/325 (40.31%), Postives = 193/325 (59.38%), Query Frame = 0


Query: 27  GPSGYGSKSTAEQVSLFPSXXXXXXXXXXXXXXXXXXXXXXXXXXATSGIGAETARVLAK 86
           G SG+   STAEQV+                              A+SGIGAET RVLA 
Sbjct: 9   GVSGFSGSSTAEQVT----------------HGIDATGLTAIVTGASSGIGAETTRVLAL 68

Query: 87  RGVKIVMTARDLKKAAQVKEAIQKESPEAEIIVFEIDLSSLASVQSFCNQFLSLGLPLNI 146
           RG  ++M  R++  A  VK+ I K+ P A++   E+DLSSL SV+ F ++F S G PLNI
Sbjct: 69  RGAHVIMGVRNMVAAKDVKDTILKDIPSAKVDAIELDLSSLDSVKKFASEFNSSGRPLNI 128

Query: 147 LINNAGVFSKNLEFSEDKVELTFATNYLGHYLLTERLLEKMIETAAKTGIEGRIINVSSV 206
           LINNAG+ +   + S+D +EL FATN++GH+LLT  LL+ M +T  ++  EGRI+NV+S 
Sbjct: 129 LINNAGIMACPFKLSKDNIELQFATNHIGHFLLTNLLLDTMKKTTRESKKEGRIVNVASE 188

Query: 207 VHGWVKKDGLSFRQMLNPNSYNGTRAYAQSKLANILHAKELSRQLQGRNARVTINAVHPG 266
            H +   +G+ F ++ + +SYN  RAY QSKLAN+LHA +L++ L+     +T N++HPG
Sbjct: 189 AHRFAYPEGIRFDKINDQSSYNNWRAYGQSKLANVLHANQLTKHLKEDGVNITANSLHPG 248

Query: 267 IVKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNETN 326
            + T + R H   +   +  +   +LK   QGA+TTCYVAL  Q +G SG++++D N   
Sbjct: 249 TIVTNLFR-HNSAVNGLINVIGKLVLKNVQQGAATTCYVALHPQVKGVSGEYFSDSNVYK 308

Query: 327 CSSLANDELEAQKLWTQTRNLINRR 352
            +    D   A+KLW  + NL+ ++
Sbjct: 309 TTPHGKDVDLAKKLWDFSINLVKQK 316

[Close]

BLAST of CsaV3_1G001280 vs. Swiss-Prot
Match: sp|P59837|RDH12_BOVIN (Retinol dehydrogenase 12 OS=Bos taurus OX=9913 GN=RDH12 PE=2 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 4.5e-40
Identity = 106/280 (37.86%), Postives = 162/280 (57.86%), Query Frame = 0


Query: 72  ATSGIGAETARVLAKRGVKIVMTARDLKKAAQVKEAIQKESPEAEIIVFEIDLSSLASVQ 131
           A +GIG ETAR LA+RG ++ +  RD+ K       IQ ++  ++++V ++DLS   S++
Sbjct: 47  ANTGIGKETARELARRGARVYIACRDVLKGESAASEIQADTKNSQVLVRKLDLSDTKSIR 106

Query: 132 SFCNQFLSLGLPLNILINNAGVFSKNLEFSEDKVELTFATNYLGHYLLTERLLEKMIETA 191
           +F   FL+    L+ILINNAGV       + D  E   A N+LGH+LLT  LL ++ E+A
Sbjct: 107 AFAEGFLAEEKQLHILINNAGVMLCPYSKTADGFETHLAVNHLGHFLLTHLLLGRLKESA 166

Query: 192 AKTGIEGRIINVSSVVHGWVKKDGLSFRQMLNPNSYNGTRAYAQSKLANILHAKELSRQL 251
                  R++N+SSV H   K   + F  +     YN   AY  SKLAN+L  +EL+++L
Sbjct: 167 -----PARVVNLSSVAHHLGK---IRFHDLQGDKYYNLGFAYCHSKLANVLFTRELAKRL 226

Query: 252 QGRNARVTINAVHPGIVKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQT 311
           +G    VT  AVHPGIV++ ++R    F+   L+ + S  LKTT +GA T+ + AL+   
Sbjct: 227 KGTG--VTTYAVHPGIVRSKLVR--HSFLLCLLWRLFSPFLKTTWEGAQTSLHCALAEGL 286

Query: 312 EGKSGKFYADCNETNCSSLANDELEAQKLWTQTRNLINRR 352
           E  SGK+++DC +T  S  A +   A++LW  +  L+  R
Sbjct: 287 EPLSGKYFSDCKKTWVSPRARNNKTAERLWNVSCELLGIR 314

[Close]

BLAST of CsaV3_1G001280 vs. Swiss-Prot
Match: sp|Q9HBH5|RDH14_HUMAN (Retinol dehydrogenase 14 OS=Homo sapiens OX=9606 GN=RDH14 PE=1 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 7.6e-40
Identity = 109/285 (38.25%), Postives = 163/285 (57.19%), Query Frame = 0


Query: 72  ATSGIGAETARVLAKRGVKIVMTARDLKKAAQVKEAIQKESPEA-------------EII 131
           A SG+G  TA  L + G +++M  RD  +A +    +++E  +A             E+I
Sbjct: 51  ANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLRRELRQAAECGPEPGVSGVGELI 110

Query: 132 VFEIDLSSLASVQSFCNQFLSLGLPLNILINNAGVFSKNLEFSEDKVELTFATNYLGHYL 191
           V E+DL+SL SV++FC + L     L++LINNAG+F      +ED  E+ F  N+LGH+L
Sbjct: 111 VRELDLASLRSVRAFCQEMLQEEPRLDVLINNAGIFQCPYMKTEDGFEMQFGVNHLGHFL 170

Query: 192 LTERLLEKMIETAAKTGIEGRIINVSSVVHGWVKKDGLSFRQMLNPNSYNGTRAYAQSKL 251
           LT  LL  +     K+    RI+ VSS ++   K   ++F  + +  SYN +  Y++SKL
Sbjct: 171 LTNLLLGLL-----KSSAPSRIVVVSSKLY---KYGDINFDDLNSEQSYNKSFCYSRSKL 230

Query: 252 ANILHAKELSRQLQGRNARVTINAVHPGIVKTAIIR-AHKGFITDSLFFMAS-KLLKTTS 311
           ANIL  +EL+R+L+G N  VT+N +HPGIV+T + R  H   +   LF + S    KT  
Sbjct: 231 ANILFTRELARRLEGTN--VTVNVLHPGIVRTNLGRHIHIPLLVKPLFNLVSWAFFKTPV 290

Query: 312 QGASTTCYVALSSQTEGKSGKFYADCNETNCSSLANDELEAQKLW 342
           +GA T+ Y+A S + EG SG+++ DC E      A DE  A+KLW
Sbjct: 291 EGAQTSIYLASSPEVEGVSGRYFGDCKEEELLPKAMDESVARKLW 325

[Close]

BLAST of CsaV3_1G001280 vs. Swiss-Prot
Match: sp|Q8BYK4|RDH12_MOUSE (Retinol dehydrogenase 12 OS=Mus musculus OX=10090 GN=Rdh12 PE=2 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.0e-39
Identity = 103/277 (37.18%), Postives = 160/277 (57.76%), Query Frame = 0


Query: 72  ATSGIGAETARVLAKRGVKIVMTARDLKKAAQVKEAIQKESPEAEIIVFEIDLSSLASVQ 131
           A +GIG ETAR LA+RG ++ +  RD+ K       I+ ++  ++++V ++DLS   S++
Sbjct: 47  ANTGIGKETARELARRGARVYIACRDVLKGESAASEIRADTKNSQVLVRKLDLSDTKSIR 106

Query: 132 SFCNQFLSLGLPLNILINNAGVFSKNLEFSEDKVELTFATNYLGHYLLTERLLEKMIETA 191
           +F  +FL+    L+ILINNAGV       + D  E  F  N+LGH+LLT  LLE++ E+A
Sbjct: 107 AFAERFLAEEKKLHILINNAGVMMCPYSKTTDGFETHFGVNHLGHFLLTYLLLERLKESA 166

Query: 192 AKTGIEGRIINVSSVVHGWVKKDGLSFRQMLNPNSYNGTRAYAQSKLANILHAKELSRQL 251
                  R++N+SS+ H   K   + F  +     Y    AY  SKLAN+L  +EL+++L
Sbjct: 167 -----PARVVNLSSIAHLIGK---IRFHDLQGQKRYCSAFAYGHSKLANLLFTRELAKRL 226

Query: 252 QGRNARVTINAVHPGIVKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQT 311
           QG    VT  AVHPG+V + I R    ++   L+ + S   K+TSQGA T+ + AL+   
Sbjct: 227 QGTG--VTAYAVHPGVVLSEITR--NSYLLCLLWRLFSPFFKSTSQGAQTSLHCALAEDL 286

Query: 312 EGKSGKFYADCNETNCSSLANDELEAQKLWTQTRNLI 349
           E  SGK+++DC     SS A ++  A++LW  +  L+
Sbjct: 287 EPLSGKYFSDCKRMWVSSRARNKKTAERLWNVSCELL 311

[Close]

BLAST of CsaV3_1G001280 vs. TrEMBL
Match: tr|A0A1S3CLP7|A0A1S3CLP7_CUCME (short-chain dehydrogenase TIC 32, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502388 PE=3 SV=1)

HSP 1 Score: 610.1 bits (1572), Expect = 3.1e-171
Identity = 329/357 (92.16%), Postives = 329/357 (92.16%), Query Frame = 0


Query: 1   MVFSVSIILSLGKLMKDTLRYLAGIPGPSGYGSKSTAEQVSLFPSXXXXXXXXXXXXXXX 60
           MVFSVSIILSLGKLMKDTLRYLAGIPGPSGYGSKSTAEQVSLF S               
Sbjct: 20  MVFSVSIILSLGKLMKDTLRYLAGIPGPSGYGSKSTAEQVSLFSS-------------SS 79

Query: 61  XXXXXXXXXXXATSGIGAETARVLAKRGVKIVMTARDLKKAAQVKEAIQKESPEAEIIVF 120
                      ATSGIGAETARVLAKRGVKIVMTARDLKKAAQVKEAIQKESPEAEIIVF
Sbjct: 80  SSSQLTAIITGATSGIGAETARVLAKRGVKIVMTARDLKKAAQVKEAIQKESPEAEIIVF 139

Query: 121 EIDLSSLASVQSFCNQFLSLGLPLNILINNAGVFSKNLEFSEDKVELTFATNYLGHYLLT 180
           EIDLSSLASVQSFCNQFLSLGLPLNILINNAGVFSKNLEFSEDKVELTFATNYLGHYLLT
Sbjct: 140 EIDLSSLASVQSFCNQFLSLGLPLNILINNAGVFSKNLEFSEDKVELTFATNYLGHYLLT 199

Query: 181 ERLLEKMIETAAKTGIEGRIINVSSVVHGWVKKDGLSFRQMLNPNSYNGTRAYAQSKLAN 240
           ERLLEKMIETAAKTGIEGRIINVSSVVHGWVKKDGLSFRQMLNPN YNGTRAYAQSKLAN
Sbjct: 200 ERLLEKMIETAAKTGIEGRIINVSSVVHGWVKKDGLSFRQMLNPNRYNGTRAYAQSKLAN 259

Query: 241 ILHAKELSRQLQGRNARVTINAVHPGIVKTAIIRAHKGFITDSLFFMASKLLKTTSQGAS 300
           ILHAKELSRQLQGRNARVTINAVHPGIVKTAIIRAHKGFITDSLFFMASKLLKTTSQGAS
Sbjct: 260 ILHAKELSRQLQGRNARVTINAVHPGIVKTAIIRAHKGFITDSLFFMASKLLKTTSQGAS 319

Query: 301 TTCYVALSSQTEGKSGKFYADCNETNCSSLANDELEAQKLWTQTRNLINRRLSKLPS 358
           TTCYVALSSQTEGKSGKFYADCNETNCSSLANDELEAQKLWTQTRNLINRRLSKLPS
Sbjct: 320 TTCYVALSSQTEGKSGKFYADCNETNCSSLANDELEAQKLWTQTRNLINRRLSKLPS 363

[Close]

BLAST of CsaV3_1G001280 vs. TrEMBL
Match: tr|A0A0A0LNV3|A0A0A0LNV3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004220 PE=3 SV=1)

HSP 1 Score: 592.8 bits (1527), Expect = 5.1e-166
Identity = 339/343 (98.83%), Postives = 339/343 (98.83%), Query Frame = 0


Query: 15  MKDTLRYLAGIPGPSGYGSKSTAEQVSLFPSXXXXXXXXXXXXXXXXXXXXXXXXXXATS 74
           MKDTLRYLAGIPGPSGYGSKSTAEQVSLFPS XXXXXXXXXXXXXXXXXXXXXX   ATS
Sbjct: 1   MKDTLRYLAGIPGPSGYGSKSTAEQVSLFPS-XXXXXXXXXXXXXXXXXXXXXXITGATS 60

Query: 75  GIGAETARVLAKRGVKIVMTARDLKKAAQVKEAIQKESPEAEIIVFEIDLSSLASVQSFC 134
           GIGAETARVLAKRGVKIVMTARDLKKAAQVKEAIQKESPEAEIIVFEIDLSSLASVQSFC
Sbjct: 61  GIGAETARVLAKRGVKIVMTARDLKKAAQVKEAIQKESPEAEIIVFEIDLSSLASVQSFC 120

Query: 135 NQFLSLGLPLNILINNAGVFSKNLEFSEDKVELTFATNYLGHYLLTERLLEKMIETAAKT 194
           NQFLSLGLPLNILINNAGVFSKNLEFSEDKVELTFATNYLGHYLLTERLLEKMIETAAKT
Sbjct: 121 NQFLSLGLPLNILINNAGVFSKNLEFSEDKVELTFATNYLGHYLLTERLLEKMIETAAKT 180

Query: 195 GIEGRIINVSSVVHGWVKKDGLSFRQMLNPNSYNGTRAYAQSKLANILHAKELSRQLQGR 254
           GIEGRIINVSSVVHGWVKKDGLSFRQMLNPNSYNGTRAYAQSKLANILHAKELSRQLQGR
Sbjct: 181 GIEGRIINVSSVVHGWVKKDGLSFRQMLNPNSYNGTRAYAQSKLANILHAKELSRQLQGR 240

Query: 255 NARVTINAVHPGIVKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGK 314
           NARVTINAVHPGIVKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGK
Sbjct: 241 NARVTINAVHPGIVKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGK 300

Query: 315 SGKFYADCNETNCSSLANDELEAQKLWTQTRNLINRRLSKLPS 358
           SGKFYADCNETNCSSLANDELEAQKLWTQTRNLINRRLSKLPS
Sbjct: 301 SGKFYADCNETNCSSLANDELEAQKLWTQTRNLINRRLSKLPS 342

[Close]

BLAST of CsaV3_1G001280 vs. TrEMBL
Match: tr|A0A1U8P2C1|A0A1U8P2C1_GOSHI (short-chain dehydrogenase TIC 32, chloroplastic-like OS=Gossypium hirsutum OX=3635 GN=LOC107953529 PE=3 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 5.3e-131
Identity = 244/344 (70.93%), Postives = 288/344 (83.72%), Query Frame = 0


Query: 9   LSLGKLMKDTLRYLAGIPGPSGYGSKSTAEQVSLFPSXXXXXXXXXXXXXXXXXXXXXXX 68
           LS   +MKDTLRYLAGI GPSGYGSK+TA+QV+                           
Sbjct: 22  LSCSTVMKDTLRYLAGIAGPSGYGSKTTAQQVA--------------DNSSSPLHRLTAI 81

Query: 69  XXXATSGIGAETARVLAKRGVKIVMTARDLKKAAQVKEAIQKESPEAEIIVFEIDLSSLA 128
              ATSGIGAETARVLAKRGV++V+ ARD+KKAA++KE I+ E+P  EI++FEIDLSSLA
Sbjct: 82  ITGATSGIGAETARVLAKRGVRVVIPARDIKKAAELKEGIENENPNVEIVLFEIDLSSLA 141

Query: 129 SVQSFCNQFLSLGLPLNILINNAGVFSKNLEFSEDKVELTFATNYLGHYLLTERLLEKMI 188
           SV+ FC QFL+LGLPLNILINNAG+FS+NLEFSEDK+E+TFATNYLGHYL+TE L+EKM+
Sbjct: 142 SVKRFCTQFLALGLPLNILINNAGIFSQNLEFSEDKIEMTFATNYLGHYLMTEMLIEKMV 201

Query: 189 ETAAKTGIEGRIINVSSVVHGWVKKDGLSFRQMLNPNSYNGTRAYAQSKLANILHAKELS 248
           ETA +TGI+GRIIN+SSV+H WVK++  SF QMLNPN+YN TRAYAQSKLANILHAKE++
Sbjct: 202 ETAEETGIQGRIINLSSVIHSWVKRECFSFTQMLNPNNYNATRAYAQSKLANILHAKEVA 261

Query: 249 RQLQGRNARVTINAVHPGIVKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALS 308
           RQL+ R+A+VTINAVHPGIVKT IIRAHKGFITDSLFF+ASKLLK+TSQGAST+CYVALS
Sbjct: 262 RQLKARSAKVTINAVHPGIVKTGIIRAHKGFITDSLFFIASKLLKSTSQGASTSCYVALS 321

Query: 309 SQTEGKSGKFYADCNETNCSSLANDELEAQKLWTQTRNLINRRL 353
            Q +G SGK++ADCNE NCS+LANDELEAQ+LW QTR LI+RRL
Sbjct: 322 PQAQGLSGKYFADCNECNCSALANDELEAQRLWRQTRALIHRRL 351

[Close]

BLAST of CsaV3_1G001280 vs. TrEMBL
Match: tr|A0A0D2N3E9|A0A0D2N3E9_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G072300 PE=3 SV=1)

HSP 1 Score: 475.7 bits (1223), Expect = 9.1e-131
Identity = 244/344 (70.93%), Postives = 288/344 (83.72%), Query Frame = 0


Query: 9   LSLGKLMKDTLRYLAGIPGPSGYGSKSTAEQVSLFPSXXXXXXXXXXXXXXXXXXXXXXX 68
           LS   +MKDTLRYLAGI GPSGYGSK+TA+QV+                           
Sbjct: 22  LSCSTVMKDTLRYLAGIAGPSGYGSKTTAQQVA--------------DNSSSPLHRLTAI 81

Query: 69  XXXATSGIGAETARVLAKRGVKIVMTARDLKKAAQVKEAIQKESPEAEIIVFEIDLSSLA 128
              ATSGIGAETARVLAKRGV++V+ ARD+KKAA++KE I+ E+P  EI++FEIDLSSLA
Sbjct: 82  ITGATSGIGAETARVLAKRGVRVVIPARDIKKAAELKEGIENENPNVEIMLFEIDLSSLA 141

Query: 129 SVQSFCNQFLSLGLPLNILINNAGVFSKNLEFSEDKVELTFATNYLGHYLLTERLLEKMI 188
           SV+ FC QFL+LGLPLNILINNAG+FS+NLEFSEDK+E+TFATNYLGHYL+TE L+EKM+
Sbjct: 142 SVKRFCTQFLALGLPLNILINNAGIFSQNLEFSEDKIEMTFATNYLGHYLMTEMLIEKMV 201

Query: 189 ETAAKTGIEGRIINVSSVVHGWVKKDGLSFRQMLNPNSYNGTRAYAQSKLANILHAKELS 248
           ETA +TGI+GRIIN+SSV+H WVK++  SF QMLNPN+YN TRAYAQSKLANILHAKE++
Sbjct: 202 ETAEETGIQGRIINLSSVIHSWVKRECFSFTQMLNPNNYNATRAYAQSKLANILHAKEVA 261

Query: 249 RQLQGRNARVTINAVHPGIVKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALS 308
           RQL+ R+A+VTINAVHPGIVKT IIRAHKGFITDSLFF+ASKLLK+TSQGAST+CYVALS
Sbjct: 262 RQLKARSAKVTINAVHPGIVKTGIIRAHKGFITDSLFFIASKLLKSTSQGASTSCYVALS 321

Query: 309 SQTEGKSGKFYADCNETNCSSLANDELEAQKLWTQTRNLINRRL 353
            Q +G SGK++ADCNE NCS+LANDELEAQ+LW QTR LI+RRL
Sbjct: 322 PQAQGLSGKYFADCNECNCSALANDELEAQRLWRQTRALIHRRL 351

[Close]

BLAST of CsaV3_1G001280 vs. TrEMBL
Match: tr|V4TIE0|V4TIE0_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10021085mg PE=3 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 2.6e-130
Identity = 245/338 (72.49%), Postives = 282/338 (83.43%), Query Frame = 0


Query: 15  MKDTLRYLAGIPGPSGYGSKSTAEQVSLFPSXXXXXXXXXXXXXXXXXXXXXXXXXXATS 74
           MK+TLRYLAGI GPSGYGSKSTAEQV+                              ATS
Sbjct: 1   MKETLRYLAGIAGPSGYGSKSTAEQVT----------------QGSVASHLTAIITGATS 60

Query: 75  GIGAETARVLAKRGVKIVMTARDLKKAAQVKEAIQKESPEAEIIVFEIDLSSLASVQSFC 134
           GIGAETARVLAKRGV++V+ ARDLK+AA+VKE IQ+ESP AE+++FEIDLSSL SVQ FC
Sbjct: 61  GIGAETARVLAKRGVRVVIPARDLKRAAEVKEGIQRESPNAEVLLFEIDLSSLVSVQRFC 120

Query: 135 NQFLSLGLPLNILINNAGVFSKNLEFSEDKVELTFATNYLGHYLLTERLLEKMIETAAKT 194
           +QFL+LGLPLNILINNAGV+SKNLEFSEDK+E+TFATNYLGHYLLTE +LEKMIETAA+T
Sbjct: 121 HQFLALGLPLNILINNAGVYSKNLEFSEDKIEMTFATNYLGHYLLTEMVLEKMIETAAET 180

Query: 195 GIEGRIINVSSVVHGWVKKDGLSFRQMLNPNSYNGTRAYAQSKLANILHAKELSRQLQGR 254
           G++GRIIN+SSV+H WVK+D   F ++LNP +YNGT AYAQSKLA I+HAKE+SRQL+ R
Sbjct: 181 GVQGRIINLSSVIHSWVKRDDFCFTRLLNPKNYNGTCAYAQSKLATIMHAKEMSRQLKAR 240

Query: 255 NARVTINAVHPGIVKTAIIRAHKGFITDSLFFMASKLLKTTSQGASTTCYVALSSQTEGK 314
           NARVTIN VHPGIVKT IIRAHKGFITDSLFF+ASKLLK+ SQGASTTCY ALS Q EG 
Sbjct: 241 NARVTINVVHPGIVKTGIIRAHKGFITDSLFFIASKLLKSISQGASTTCYAALSPQIEGV 300

Query: 315 SGKFYADCNETNCSSLANDELEAQKLWTQTRNLINRRL 353
           SGK++ADCNE+NCS+LANDE EA+KLW QTR LI+RRL
Sbjct: 301 SGKYFADCNESNCSALANDESEAKKLWKQTRALIHRRL 322

The following BLAST results are available for this feature:

BLAST of CsaV3_1G001280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138098.2	1.5e-172	98.88	PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Cucumis sativus]	[more]
XP_008464537.1	4.7e-171	92.16	PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Cucumis melo]	[more]
KGN63555.1	7.7e-166	98.83	hypothetical protein Csa_1G004220 [Cucumis sativus]	[more]
XP_022988395.1	2.7e-158	86.20	short-chain dehydrogenase TIC 32, chloroplastic-like isoform X1 [Cucurbita maxim...	[more]
XP_022921530.1	4.5e-158	85.92	short-chain dehydrogenase TIC 32, chloroplastic isoform X1 [Cucurbita moschata]	[more]

BLAST of CsaV3_1G001280 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G50130.1	5.4e-121	68.71	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT1G64590.1	1.4e-84	51.04	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT4G24050.1	9.0e-84	49.11	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT5G02540.1	1.6e-69	45.12	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT2G37540.1	1.6e-64	43.13	NAD(P)-binding Rossmann-fold superfamily protein	[more]

BLAST of CsaV3_1G001280 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|A2RVM0\|TIC32_ARATH	2.3e-60	41.51	Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q6RVV4\|TIC32_PEA	1.9e-59	40.31	Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum OX=3888 GN=TIC3...	[more]
sp\|P59837\|RDH12_BOVIN	4.5e-40	37.86	Retinol dehydrogenase 12 OS=Bos taurus OX=9913 GN=RDH12 PE=2 SV=1	[more]
sp\|Q9HBH5\|RDH14_HUMAN	7.6e-40	38.25	Retinol dehydrogenase 14 OS=Homo sapiens OX=9606 GN=RDH14 PE=1 SV=1	[more]
sp\|Q8BYK4\|RDH12_MOUSE	1.0e-39	37.18	Retinol dehydrogenase 12 OS=Mus musculus OX=10090 GN=Rdh12 PE=2 SV=1	[more]

BLAST of CsaV3_1G001280 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CLP7\|A0A1S3CLP7_CUCME	3.1e-171	92.16	short-chain dehydrogenase TIC 32, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0LNV3\|A0A0A0LNV3_CUCSA	5.1e-166	98.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004220 PE=3 SV=1	[more]
tr\|A0A1U8P2C1\|A0A1U8P2C1_GOSHI	5.3e-131	70.93	short-chain dehydrogenase TIC 32, chloroplastic-like OS=Gossypium hirsutum OX=36...	[more]
tr\|A0A0D2N3E9\|A0A0D2N3E9_GOSRA	9.1e-131	70.93	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G072300 PE=3 ...	[more]
tr\|V4TIE0\|V4TIE0_9ROSI	2.6e-130	72.49	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10021085mg PE=3 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036291	NAD(P)-bd_dom_sf
IPR002347	SDR_fam

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0015995	chlorophyll biosynthetic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0019685	photosynthesis, dark reaction
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016630	protochlorophyllide reductase activity
molecular_function	GO:0016491	oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G001280.1	CsaV3_1G001280.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00081	GDHRDH	coord: 66..83 score: 45.52 coord: 192..208 score: 33.17 coord: 142..153 score: 47.12 coord: 233..252 score: 26.68 coord: 256..273 score: 32.49
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00080	SDRFAMILY	coord: 142..153 score: 46.66 coord: 198..206 score: 61.15 coord: 233..252 score: 25.42
IPR002347	Short-chain dehydrogenase/reductase SDR	PFAM	PF00106	adh_short	coord: 66..207 e-value: 9.3E-30 score: 103.4
None	No IPR available	GENE3D	G3DSA:3.40.50.720		coord: 52..353 e-value: 1.2E-76 score: 259.6
None	No IPR available	PANTHER	PTHR24320:SF120	RIBITOL DEHYDROGENASE-LIKE	coord: 20..352
None	No IPR available	PANTHER	PTHR24320	FAMILY NOT NAMED	coord: 20..352
None	No IPR available	CDD	cd05327	retinol-DH_like_SDR_c_like	coord: 66..341 e-value: 1.99947E-92 score: 279.109
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	SSF51735	NAD(P)-binding Rossmann-fold domains	coord: 65..326

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G001280	CSPI01G01170	Wild cucumber (PI 183967)	cpicucB001
CsaV3_1G001280	Cucsa.196660	Cucumber (Gy14) v1	cgycucB314
CsaV3_1G001280	CmaCh13G008710	Cucurbita maxima (Rimu)	cmacucB0239
CsaV3_1G001280	CmaCh10G001110	Cucurbita maxima (Rimu)	cmacucB0058
CsaV3_1G001280	CmoCh13G009030	Cucurbita moschata (Rifu)	cmocucB0227
CsaV3_1G001280	CmoCh10G001150	Cucurbita moschata (Rifu)	cmocucB0044
CsaV3_1G001280	Cp4.1LG18g08540	Cucurbita pepo (Zucchini)	cpecucB0442
CsaV3_1G001280	Cp4.1LG20g02610	Cucurbita pepo (Zucchini)	cpecucB0638
CsaV3_1G001280	CsGy1G001230	Cucumber (Gy14) v2	cgybcucB002
CsaV3_1G001280	Carg07663	Silver-seed gourd	carcucB1047
CsaV3_1G001280	Carg10332	Silver-seed gourd	carcucB0395
CsaV3_1G001280	Cla019215	Watermelon (97103) v1	cucwmB105
CsaV3_1G001280	Cla003447	Watermelon (97103) v1	cucwmB056
CsaV3_1G001280	MELO3C026276	Melon (DHL92) v3.5.1	cucmeB053
CsaV3_1G001280	ClCG01G013360	Watermelon (Charleston Gray)	cucwcgB028
CsaV3_1G001280	ClCG06G017210	Watermelon (Charleston Gray)	cucwcgB088
CsaV3_1G001280	Lsi02G003950	Bottle gourd (USVL1VR-Ls)	cuclsiB036
CsaV3_1G001280	Lsi06G015730	Bottle gourd (USVL1VR-Ls)	cuclsiB081
CsaV3_1G001280	MELO3C026276.2	Melon (DHL92) v3.6.1	cucmedB050
CsaV3_1G001280	Cla97C01G012420	Watermelon (97103) v2	cucwmbB012
CsaV3_1G001280	Cla97C06G126900	Watermelon (97103) v2	cucwmbB076
CsaV3_1G001280	Bhi08G001336	Wax gourd	cucwgoB060
CsaV3_1G001280	Bhi02G000371	Wax gourd	cucwgoB103

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G001280	Silver-seed gourd	carcucB0530
CsaV3_1G001280	Silver-seed gourd	carcucB1095
CsaV3_1G001280	Cucumber (Gy14) v2	cgybcucB008
CsaV3_1G001280	Cucumber (Gy14) v2	cgybcucB106
CsaV3_1G001280	Cucumber (Gy14) v1	cgycucB110
CsaV3_1G001280	Cucumber (Gy14) v1	cgycucB520
CsaV3_1G001280	Cucurbita maxima (Rimu)	cmacucB0100
CsaV3_1G001280	Cucurbita maxima (Rimu)	cmacucB0117
CsaV3_1G001280	Cucurbita maxima (Rimu)	cmacucB0478
CsaV3_1G001280	Cucurbita moschata (Rifu)	cmocucB0091
CsaV3_1G001280	Cucurbita moschata (Rifu)	cmocucB0094
CsaV3_1G001280	Cucurbita moschata (Rifu)	cmocucB0261
CsaV3_1G001280	Cucurbita moschata (Rifu)	cmocucB0468
CsaV3_1G001280	Cucurbita moschata (Rifu)	cmocucB0801
CsaV3_1G001280	Cucurbita pepo (Zucchini)	cpecucB0023
CsaV3_1G001280	Cucurbita pepo (Zucchini)	cpecucB0473
CsaV3_1G001280	Cucurbita pepo (Zucchini)	cpecucB0814
CsaV3_1G001280	Wild cucumber (PI 183967)	cpicucB012
CsaV3_1G001280	Wild cucumber (PI 183967)	cpicucB131
CsaV3_1G001280	Bottle gourd (USVL1VR-Ls)	cuclsiB049
CsaV3_1G001280	Melon (DHL92) v3.5.1	cucmeB015
CsaV3_1G001280	Melon (DHL92) v3.6.1	cucmedB013
CsaV3_1G001280	Watermelon (Charleston Gray)	cucwcgB002
CsaV3_1G001280	Watermelon (Charleston Gray)	cucwcgB006
CsaV3_1G001280	Watermelon (Charleston Gray)	cucwcgB100
CsaV3_1G001280	Watermelon (97103) v1	cucwmB003
CsaV3_1G001280	Watermelon (97103) v1	cucwmB007
CsaV3_1G001280	Watermelon (97103) v2	cucwmbB093
CsaV3_1G001280	Wax gourd	cucwgoB009
CsaV3_1G001280	Cucumber (Chinese Long) v3	cuccucB002