Carg07663 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg07663
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	short-chain dehydrogenase TIC 32, chloroplastic
Location	Cucurbita_argyrosperma_scaffold_024 : 804685 .. 807701 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGAGACTCTAAGGTATTTGGTAGGAATGGCAGGCCCAAGTGGGTATGGCTCTAAGTCAAGTGCAGAGCAAGTTACTGAACATTTGCAGTGTTCTTCTCCTTTGACTGCCATTATCACTGGTAAGCTTTTTTTTGAACGATAATAAACTAATCGTGGTCTTTTCTTACTGTTTTGTTCTATATTCACTTTGTTCTGCAAGTTGTATCCTAAACTAATGTATCGTTCTTTTGAACGGTCCCAACTTCAAAGGTTGACTTTTTTTCAAAAAAAAAAAAAAAAAAATGGGAAACATAAGTCAATTACGGTTAAGCTATGCTCGAATTATCTTTAAAGTTGTGGTCATGGTCGGTTAAGCTATGCTCGAATTATCTTTAAAGTTGTGGTCATGGTCAGTTAGAAGCACAAAAGAACCAAAGTTGCAAGAATTTAGGTTTTTGTTTCTATTTTCCTAAATTTTATTAGGAAGAAATTAAATCTATAAAATCTTGTTCGATAATCATATATTTTAGCTTTTTTTATTTTTTTTATTTTTATTTTTATTTTTAATTAAGCTTATAAATATTACTCAACCCCTAATTTCTTTGTTTTGTTATATATATATTTTAATGAGCTAGAATTTAATTTATTAAAGAGAGACAAAAATAAAAAAGAAATCGTGAGAAAACAAGCCCAATTTTCAAAAATAAAAATCATTATAAAATGGAGTCTTACCTTTAGATCAATTGAATTATGGTCGACTTGGTTGTCTTCAGCTCGAGGCTTCATTTCTCTAAATTTGAGTCATGAGGATGTTCGAAACTAAATGGATTTAACCAAATCGTTTCTTGTATCCACCTCCAAACTTTAATCCGTACATCCTATACATATATACACATACTTGTATGAGAAGCTTAATTATATAAATATAAGGAAGGAAATAAGGAGAGAAACCACTCAGCATGATCAATTAAACCATGTAATGTTACCAAAGAATAATAGATGGGTGTTAAAACAAGACAAAACAATCCAGAAGAATGATGAGAATTTGATTCTATTTGTGGGTGCAAAAAGGGGCAACATCAGGAATTGGAGAAGAAACAGCAAGAGTTTTAGCAAAAAGAGGCGTGAGAATAGTAATGGCAGCAAGAGACATGAAGAAGGCAGCAAAAGTGAGAGAGAGGATCAAAAGAGGAGGTCCAGAAGCAGAGATTTTAATGTCTGAGATAGACCTCAGCTCTTTGGCTTCTGTTAGGAGGTTCTGTATGGAGTTTGCAGCTTTAGGGCTACCACTCAACATTCTCATGTGAGTTTGCCCCCACTTTCCCCAACCAATATCCCATTTTCCCCTCTCAAATTTCACCCTTTTTTGGACACATAAACTGTTTTTGCAGAAACAATGGTGGGGTTTTCTCTCCAAATTTGGAGTATTCTGATGACAAGCTTGAATTGACATTTGCTACTAATTATTTGGGTAATAGTTTTTCCTTCTCTCTTTTTTCTTCTCATTCTGAAACTCAAACACAGAACAACAGTTTGATTGCAGAAGAATAGATGACTCTTAGCTCTACAAACTCCTTAACTTAATTACTTTTCCAGAGTCAGAGAAAGTTGAATCTACTCAATAATGGCTAAAGAAGAATGAAGTTACGTCAAAAAAAGGATACAAAATGAATTTCAAAATTCTTTTTCCTGCAGGACATTACCTTCTGACAGAACTGCTTTTAGACAAATTGATAGAAACATCAAGGAGAACAGGCATCCAAGGAAGAATTATAAACGTCTCTTCTGTTGTCCACTGCTGGGTGAAGAAGGACGATCTCTGCTTCACTCACCTGCTCAACCCAAACAAGTTAGAAAAACTCGAACCCATTACAGATTATTTTCGTTTAGGCTTCGAATTTTCAAGTTTGTGTTTATTTGATTCATCAACGGTCGAAAGGGTCAGGTAGAAACGCAAACTTTCAATTTTTGTGTCCAATAAGTCAATAATCTTTCAAAAGTGCAAAGTTAAAGAAATCCATTTTGAGTAACTAAAACTAGTAATTGAACCTTTCTTTCGCCCTTTTCTCAAAACACAAAAAGTTACCTGGGTGTTCACTAGCTGACTACAGGTCAATAGCAATCCATGGTCAGAGAATCAAACTAAGCCCTGTTTGGGGTTTTGGATTTGGAATTTCTGCAGGTACAATGGCACGCGTGCTTATGCTCAATCAAAACTGGCTTGCATTTTACATGCCAAGGAGGTGGCTAGACAGTTGAAGGTAATCTTGCTTCTTCAACTTCTACGTTTCCTGCAAACAGTTGACAAAACAGTTCATATTCTGAAATTCCAGCCATTTTTACAGGAAAGAGATGCCAATGTGACAATCAATGCAGTGCATCCAGGAATTGTAAAGACTGCAATTATCAAGGCACATCGAGGATTTATCACAGGCATGAACTGTTGACTCTTTCTAATTCCTGATGTACAGCCATCTTCAGCCAGTTCTACTTCTACCAAAAGGAAAATGTACAAGAGGCTACTGATTTATCATAACTATATTCTAACATCTCTTGCAGATTCTCTCTTTTTCATGGCATCAAAGTTACTAAAATCCATTCCTCAGGTATTTTCATACGTAAAATCGATTCAGAGCGTTTGGATTTGCCTAGTGTTACTCATACAAAACAGATAGTAACGATTATTGTGCCTGCAGGGTGCTGCTACGACATGCTATGTGGCTCTAAGCCCACAAACACATAGAAAAACAGGAAGATATTTTGCAGATTGTAATGAGACTAAGTGTTCATCTCTAGCCAACGATGAGTTAGCAGCACGAACGCTATGGATACAAACTCGTGCCCTAATTCTCAGAGAACTTGGTGAACCAGTTTGATCTACATCATCATCAATAAATTTTCAACCAAGAGAGAGAGAGAATAGTATATATAAATCTATGCATTTGTAAATGAACAGAGATCCTGCAGAAGTTCATCGAATAAGATCTCGTAATAAAAATACGCCTAAATTCTTGAACAATCACTCGATTTTTT

mRNA sequence

ATGAAGGAGACTCTAAGGTATTTGGTAGGAATGGCAGGCCCAAGTGGGTATGGCTCTAAGTCAAGTGCAGAGCAAGTTACTGAACATTTGCAGTGTTCTTCTCCTTTGACTGCCATTATCACTGGGGCAACATCAGGAATTGGAGAAGAAACAGCAAGAGTTTTAGCAAAAAGAGGCGTGAGAATAGTAATGGCAGCAAGAGACATGAAGAAGGCAGCAAAAGTGAGAGAGAGGATCAAAAGAGGAGGTCCAGAAGCAGAGATTTTAATGTCTGAGATAGACCTCAGCTCTTTGGCTTCTGTTAGGAGGTTCTGTATGGAGTTTGCAGCTTTAGGGCTACCACTCAACATTCTCATAAACAATGGTGGGGTTTTCTCTCCAAATTTGGAGTATTCTGATGACAAGCTTGAATTGACATTTGCTACTAATTATTTGGGACATTACCTTCTGACAGAACTGCTTTTAGACAAATTGATAGAAACATCAAGGAGAACAGGCATCCAAGGAAGAATTATAAACGTCTCTTCTGTTGTCCACTGCTGGGTGAAGAAGGACGATCTCTGCTTCACTCACCTGCTCAACCCAAACAAGTACAATGGCACGCGTGCTTATGCTCAATCAAAACTGGCTTGCATTTTACATGCCAAGGAGGTGGCTAGACAGTTGAAGGTAATCTTGCTTCTTCAACTTCTACGTTTCCTGCAAACAGTTGACAAAACAGTTCATATTCTGAAATTCCAGCCATTTTTACAGGAAAGAGATGCCAATGTGACAATCAATGCAGTGCATCCAGGAATTCCATCTTCAGCCAGTTCTACTTCTACCAAAAGGAAAATGTACAAGAGGCTACTGATTTATCATAACTATATTCTAACATCTCTTGCAGATTCTCTCTTTTTCATGGCATCAAAGTTACTAAAATCCATTCCTCAGGGTGCTGCTACGACATGCTATGTGGCTCTAAGCCCACAAACACATAGAAAAACAGGAAGATATTTTGCAGATTGTAATGAGACTAAGTGTTCATCTCTAGCCAACGATGAGTTAGCAGCACGAACGCTATGGATACAAACTCGTGCCCTAATTCTCAGAGAACTTGGTGAACCAGTTTGATCTACATCATCATCAATAAATTTTCAACCAAGAGAGAGAGAGAATAGTATATATAAATCTATGCATTTGTAAATGAACAGAGATCCTGCAGAAGTTCATCGAATAAGATCTCGTAATAAAAATACGCCTAAATTCTTGAACAATCACTCGATTTTTT

Coding sequence (CDS)

ATGAAGGAGACTCTAAGGTATTTGGTAGGAATGGCAGGCCCAAGTGGGTATGGCTCTAAGTCAAGTGCAGAGCAAGTTACTGAACATTTGCAGTGTTCTTCTCCTTTGACTGCCATTATCACTGGGGCAACATCAGGAATTGGAGAAGAAACAGCAAGAGTTTTAGCAAAAAGAGGCGTGAGAATAGTAATGGCAGCAAGAGACATGAAGAAGGCAGCAAAAGTGAGAGAGAGGATCAAAAGAGGAGGTCCAGAAGCAGAGATTTTAATGTCTGAGATAGACCTCAGCTCTTTGGCTTCTGTTAGGAGGTTCTGTATGGAGTTTGCAGCTTTAGGGCTACCACTCAACATTCTCATAAACAATGGTGGGGTTTTCTCTCCAAATTTGGAGTATTCTGATGACAAGCTTGAATTGACATTTGCTACTAATTATTTGGGACATTACCTTCTGACAGAACTGCTTTTAGACAAATTGATAGAAACATCAAGGAGAACAGGCATCCAAGGAAGAATTATAAACGTCTCTTCTGTTGTCCACTGCTGGGTGAAGAAGGACGATCTCTGCTTCACTCACCTGCTCAACCCAAACAAGTACAATGGCACGCGTGCTTATGCTCAATCAAAACTGGCTTGCATTTTACATGCCAAGGAGGTGGCTAGACAGTTGAAGGTAATCTTGCTTCTTCAACTTCTACGTTTCCTGCAAACAGTTGACAAAACAGTTCATATTCTGAAATTCCAGCCATTTTTACAGGAAAGAGATGCCAATGTGACAATCAATGCAGTGCATCCAGGAATTCCATCTTCAGCCAGTTCTACTTCTACCAAAAGGAAAATGTACAAGAGGCTACTGATTTATCATAACTATATTCTAACATCTCTTGCAGATTCTCTCTTTTTCATGGCATCAAAGTTACTAAAATCCATTCCTCAGGGTGCTGCTACGACATGCTATGTGGCTCTAAGCCCACAAACACATAGAAAAACAGGAAGATATTTTGCAGATTGTAATGAGACTAAGTGTTCATCTCTAGCCAACGATGAGTTAGCAGCACGAACGCTATGGATACAAACTCGTGCCCTAATTCTCAGAGAACTTGGTGAACCAGTTTGA

Protein sequence

MKETLRYLVGMAGPSGYGSKSSAEQVTEHLQCSSPLTAIITGATSGIGEETARVLAKRGVRIVMAARDMKKAAKVRERIKRGGPEAEILMSEIDLSSLASVRRFCMEFAALGLPLNILINNGGVFSPNLEYSDDKLELTFATNYLGHYLLTELLLDKLIETSRRTGIQGRIINVSSVVHCWVKKDDLCFTHLLNPNKYNGTRAYAQSKLACILHAKEVARQLKVILLLQLLRFLQTVDKTVHILKFQPFLQERDANVTINAVHPGIPSSASSTSTKRKMYKRLLIYHNYILTSLADSLFFMASKLLKSIPQGAATTCYVALSPQTHRKTGRYFADCNETKCSSLANDELAARTLWIQTRALILRELGEPV

Homology

[Close]

BLAST of Carg07663 vs. NCBI nr
Match: XP_022924073.1 (short-chain dehydrogenase TIC 32, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 592.0 bits (1525), Expect = 1.4e-165
Identity = 316/370 (85.41%), Postives = 320/370 (86.49%), Query Frame = 0


Query: 1   MKETLRYLVGMAGPSGYGSKSSAEQVTEHLQCSSPLTAIITGATSGIGEETARVLAKRGV 60
           MKETLRYLVGMAGPSGYGSKSSAEQVTEHLQCSSPLTAIITGATSGIGEETARVLAKRGV
Sbjct: 14  MKETLRYLVGMAGPSGYGSKSSAEQVTEHLQCSSPLTAIITGATSGIGEETARVLAKRGV 73

Query: 61  RIVMAARDMKKAAKVRERIKRGGPEAEILMSEIDLSSLASVRRFCMEFAALGLPLNILIN 120
           RIVMAARDMKKAAKVRERIKRGGPEAEILMSEIDLSSLASVRRFCMEFAALGLPLNILIN
Sbjct: 74  RIVMAARDMKKAAKVRERIKRGGPEAEILMSEIDLSSLASVRRFCMEFAALGLPLNILIN 133

Query: 121 NGGVFSPNLEYSDDKLELTFATNYLGHYLLTELLLDKLIETSRRTGIQGRIINVSSVVHC 180
           NGGVFSPNLEYSDDKLELTFATNYLGHYLLTELLLDKLIETSRRTGIQGRIINVSSVVHC
Sbjct: 134 NGGVFSPNLEYSDDKLELTFATNYLGHYLLTELLLDKLIETSRRTGIQGRIINVSSVVHC 193

Query: 181 WVKKDDLCFTHLLNPNKYNGTRAYAQSKLACILHAKEVARQLKVILLLQLLRFLQTVDKT 240
           WVKKDDLCFTHLLNPNKYNGTRAYAQSKLACILHAKEVARQLK                 
Sbjct: 194 WVKKDDLCFTHLLNPNKYNGTRAYAQSKLACILHAKEVARQLK----------------- 253

Query: 241 VHILKFQPFLQERDANVTINAVHPGIPSSASSTSTKRKMYKRLLIYHNYILTSLADSLFF 300
                      ERDANVTINAVHPGI  +A            ++  H   +T   DSLFF
Sbjct: 254 -----------ERDANVTINAVHPGIVKTA------------IIKAHRGFIT---DSLFF 313

Query: 301 MASKLLKSIPQGAATTCYVALSPQTHRKTGRYFADCNETKCSSLANDELAARTLWIQTRA 360
           MASKLLKSIPQGAATTCYVALSPQTHRKTGRYFADCNETKCSSLANDELAARTLWIQTRA
Sbjct: 314 MASKLLKSIPQGAATTCYVALSPQTHRKTGRYFADCNETKCSSLANDELAARTLWIQTRA 340

Query: 361 LILRELGEPV 371
           LILRELGEPV
Sbjct: 374 LILRELGEPV 340

[Close]

BLAST of Carg07663 vs. NCBI nr
Match: XP_023000696.1 (short-chain dehydrogenase TIC 32, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 581.6 bits (1498), Expect = 1.8e-162
Identity = 311/370 (84.05%), Postives = 318/370 (85.95%), Query Frame = 0


Query: 1   MKETLRYLVGMAGPSGYGSKSSAEQVTEHLQCSSPLTAIITGATSGIGEETARVLAKRGV 60
           MKETLRYLVG+AGPSGYGSKSSAEQVTEHLQCSSPLTAIITGATSGIGEETARVLAKRGV
Sbjct: 14  MKETLRYLVGIAGPSGYGSKSSAEQVTEHLQCSSPLTAIITGATSGIGEETARVLAKRGV 73

Query: 61  RIVMAARDMKKAAKVRERIKRGGPEAEILMSEIDLSSLASVRRFCMEFAALGLPLNILIN 120
           RIVMAARDMKKAAKVRERIKR GPEAEIL+SEIDLSSLASVRRFCMEFAALGLPLNILIN
Sbjct: 74  RIVMAARDMKKAAKVRERIKREGPEAEILVSEIDLSSLASVRRFCMEFAALGLPLNILIN 133

Query: 121 NGGVFSPNLEYSDDKLELTFATNYLGHYLLTELLLDKLIETSRRTGIQGRIINVSSVVHC 180
           NGGVFSPNLEYSDDKLELTFATNYLGHYLLTELLLDKLIETSRRTGIQGRIINVSSVVHC
Sbjct: 134 NGGVFSPNLEYSDDKLELTFATNYLGHYLLTELLLDKLIETSRRTGIQGRIINVSSVVHC 193

Query: 181 WVKKDDLCFTHLLNPNKYNGTRAYAQSKLACILHAKEVARQLKVILLLQLLRFLQTVDKT 240
           WVKKDDLCFTHLLNPNKYNGTRAYAQSKLACILHAKEVARQLK                 
Sbjct: 194 WVKKDDLCFTHLLNPNKYNGTRAYAQSKLACILHAKEVARQLK----------------- 253

Query: 241 VHILKFQPFLQERDANVTINAVHPGIPSSASSTSTKRKMYKRLLIYHNYILTSLADSLFF 300
                      ERDANVTINAVHPGI  +A            ++  H   +T   DSLFF
Sbjct: 254 -----------ERDANVTINAVHPGIVKTA------------IIKAHRGFIT---DSLFF 313

Query: 301 MASKLLKSIPQGAATTCYVALSPQTHRKTGRYFADCNETKCSSLANDELAARTLWIQTRA 360
           MASKLLKSIPQGAATTCYVALSPQT RKTGRYFADCNETKCSSLANDELAARTLW+QTRA
Sbjct: 314 MASKLLKSIPQGAATTCYVALSPQTQRKTGRYFADCNETKCSSLANDELAARTLWMQTRA 340

Query: 361 LILRELGEPV 371
           LILRELGEPV
Sbjct: 374 LILRELGEPV 340

[Close]

BLAST of Carg07663 vs. NCBI nr
Match: XP_023519347.1 (short-chain dehydrogenase TIC 32, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 573.5 bits (1477), Expect = 5.0e-160
Identity = 306/370 (82.70%), Postives = 316/370 (85.41%), Query Frame = 0


Query: 1   MKETLRYLVGMAGPSGYGSKSSAEQVTEHLQCSSPLTAIITGATSGIGEETARVLAKRGV 60
           MKETLRYLVG+AGPSGYGSKSSAEQVTEHLQCSSPLTAIITGATSGIGEETARVLAKRG+
Sbjct: 1   MKETLRYLVGIAGPSGYGSKSSAEQVTEHLQCSSPLTAIITGATSGIGEETARVLAKRGM 60

Query: 61  RIVMAARDMKKAAKVRERIKRGGPEAEILMSEIDLSSLASVRRFCMEFAALGLPLNILIN 120
           RIVMAARDMKKAAKV+ERIKR GPEAEIL+SEIDLSSLASVRRFCMEFAALGLPLNILIN
Sbjct: 61  RIVMAARDMKKAAKVKERIKREGPEAEILVSEIDLSSLASVRRFCMEFAALGLPLNILIN 120

Query: 121 NGGVFSPNLEYSDDKLELTFATNYLGHYLLTELLLDKLIETSRRTGIQGRIINVSSVVHC 180
           NGGVFSPNLEYSDDKLELTFATNYLGHY++TELLLDKLIETS+RTGIQGRIINVSSVVHC
Sbjct: 121 NGGVFSPNLEYSDDKLELTFATNYLGHYIMTELLLDKLIETSKRTGIQGRIINVSSVVHC 180

Query: 181 WVKKDDLCFTHLLNPNKYNGTRAYAQSKLACILHAKEVARQLKVILLLQLLRFLQTVDKT 240
           WVKKDDLCFTHLLNPNKYNGTRAYAQSKLACILHAKEVARQLK                 
Sbjct: 181 WVKKDDLCFTHLLNPNKYNGTRAYAQSKLACILHAKEVARQLK----------------- 240

Query: 241 VHILKFQPFLQERDANVTINAVHPGIPSSASSTSTKRKMYKRLLIYHNYILTSLADSLFF 300
                      ERDANVTINAVHPGI  +A            +L  H   +T   DSLFF
Sbjct: 241 -----------ERDANVTINAVHPGIVKTA------------ILKAHRGFIT---DSLFF 300

Query: 301 MASKLLKSIPQGAATTCYVALSPQTHRKTGRYFADCNETKCSSLANDELAARTLWIQTRA 360
           MASKLLKSIPQGAATTCYVALSPQT RKTGRYFADCNETKCSSLANDELAAR LWIQTRA
Sbjct: 301 MASKLLKSIPQGAATTCYVALSPQTRRKTGRYFADCNETKCSSLANDELAARKLWIQTRA 327

Query: 361 LILRELGEPV 371
           LILREL EPV
Sbjct: 361 LILRELDEPV 327

[Close]

BLAST of Carg07663 vs. NCBI nr
Match: XP_022137126.1 (short-chain dehydrogenase TIC 32, chloroplastic-like [Momordica charantia])

HSP 1 Score: 514.2 bits (1323), Expect = 3.6e-142
Identity = 274/368 (74.46%), Postives = 299/368 (81.25%), Query Frame = 0


Query: 1   MKETLRYLVGMAGPSGYGSKSSAEQVTEHLQCSSPLTAIITGATSGIGEETARVLAKRGV 60
           MKETLRYL G+AG SGYGSKS+AEQVT+H   SSPLTAIITGATSGIGEETARV+AKRGV
Sbjct: 1   MKETLRYLAGIAGQSGYGSKSTAEQVTQHSHFSSPLTAIITGATSGIGEETARVMAKRGV 60

Query: 61  RIVMAARDMKKAAKVRERIKRGGPEAEILMSEIDLSSLASVRRFCMEFAALGLPLNILIN 120
           RIV+AARD+KKAAKV+ERIKR   EAEIL+SEIDLSSLASVRRFC++FAA GLPLNILIN
Sbjct: 61  RIVIAARDLKKAAKVKERIKRESAEAEILVSEIDLSSLASVRRFCVDFAASGLPLNILIN 120

Query: 121 NGGVFSPNLEYSDDKLELTFATNYLGHYLLTELLLDKLIETSRRTGIQGRIINVSSVVHC 180
           N GVFSPNLEYSDDK ELTFATNYLGHYLLTE+LLD LIETS+RTGIQGRIINVSSVVHC
Sbjct: 121 NAGVFSPNLEYSDDKFELTFATNYLGHYLLTEMLLDNLIETSKRTGIQGRIINVSSVVHC 180

Query: 181 WVKKDDLCFTHLLNPNKYNGTRAYAQSKLACILHAKEVARQLKVILLLQLLRFLQTVDKT 240
           WVKKD LCFTHLLNPNKYN T AYAQSKLACILHAKEVARQLK                 
Sbjct: 181 WVKKDGLCFTHLLNPNKYNATLAYAQSKLACILHAKEVARQLK----------------- 240

Query: 241 VHILKFQPFLQERDANVTINAVHPGIPSSASSTSTKRKMYKRLLIYHNYILTSLADSLFF 300
                      ER ANVT+NA+HPGI  +A            ++  H   +T   DSLFF
Sbjct: 241 -----------ERAANVTVNALHPGIVKTA------------IIRAHGGFIT---DSLFF 300

Query: 301 MASKLLKSIPQGAATTCYVALSPQTHRKTGRYFADCNETKCSSLANDELAARTLWIQTRA 360
           MASKLLKSIPQGAATTCYVAL+PQT RKTG+YF+DCNETKCS+LAN+ELAAR LW+QTRA
Sbjct: 301 MASKLLKSIPQGAATTCYVALNPQTERKTGKYFSDCNETKCSALANNELAARKLWMQTRA 325

Query: 361 LILRELGE 369
           LI R+LGE
Sbjct: 361 LIHRQLGE 325

[Close]

BLAST of Carg07663 vs. NCBI nr
Match: XP_022134670.1 (short-chain dehydrogenase TIC 32, chloroplastic-like [Momordica charantia])

HSP 1 Score: 438.3 bits (1126), Expect = 2.5e-119
Identity = 239/374 (63.90%), Postives = 280/374 (74.87%), Query Frame = 0


Query: 1   MKETLRYLVGMAGPSGYGSKSSAEQVTEHLQCSS-----PLTAIITGATSGIGEETARVL 60
           MKETLRYL G+AGPSGYGS S+AEQVT++   SS     PLTAIITGATSGIG ETARVL
Sbjct: 15  MKETLRYLAGIAGPSGYGSNSTAEQVTQNYSISSSSTSHPLTAIITGATSGIGAETARVL 74

Query: 61  AKRGVRIVMAARDMKKAAKVRERIKRGGPEAEILMSEIDLSSLASVRRFCMEFAALGLPL 120
           AKRGVRIVMAARD+KKAA+V+E I++  PEAEI++ EIDLSSLASV+RFC +F ALGLPL
Sbjct: 75  AKRGVRIVMAARDLKKAAQVKEGIQKETPEAEIIVCEIDLSSLASVQRFCNQFLALGLPL 134

Query: 121 NILINNGGVFSPNLEYSDDKLELTFATNYLGHYLLTELLLDKLIETSRRTGIQGRIINVS 180
           NILINN GVFS NLE+S+DK+ELTFATNYLGHY LTE LL+K+IET+ +TGI+GRIINVS
Sbjct: 135 NILINNAGVFSKNLEFSEDKVELTFATNYLGHYFLTETLLEKMIETAAKTGIEGRIINVS 194

Query: 181 SVVHCWVKKDDLCFTHLLNPNKYNGTRAYAQSKLACILHAKEVARQLKVILLLQLLRFLQ 240
           SV+HCWVKKD L F  +LNPN YNGTRAYAQSKLA ILHAKE++RQ              
Sbjct: 195 SVIHCWVKKDGLRFGQMLNPNNYNGTRAYAQSKLANILHAKEMSRQ-------------- 254

Query: 241 TVDKTVHILKFQPFLQERDANVTINAVHPGIPSSASSTSTKRKMYKRLLIYHNYILTSLA 300
                         LQ R+A VTINAVHPGI  +A            ++  H   +T   
Sbjct: 255 --------------LQARNARVTINAVHPGIVKTA------------IIRAHKGFIT--- 314

Query: 301 DSLFFMASKLLKSIPQGAATTCYVALSPQTHRKTGRYFADCNETKCSSLANDELAARTLW 360
           DSLFFMASKLLK+  QGA+TTCYVALS QT  K+G+++ADCNET CS+LA+DEL A+ LW
Sbjct: 315 DSLFFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNETNCSALASDELEAQKLW 345

Query: 361 IQTRALILRELGEP 370
            +T  LI R L +P
Sbjct: 375 TKTHNLIHRRLSKP 345

[Close]

BLAST of Carg07663 vs. TAIR10
Match: AT5G50130.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 395.2 bits (1014), Expect = 4.4e-110
Identity = 221/371 (59.57%), Postives = 268/371 (72.24%), Query Frame = 0


Query: 1   MKETLRYLVGMAGPSGYGSKSSAEQVTEH--LQCSSPLTAIITGATSGIGEETARVLAKR 60
           MK TLRYL G+AGP+G+GS+S+AEQVT+H    CS  LTAIITG TSGIG ETARVLAKR
Sbjct: 1   MKGTLRYLAGIAGPNGFGSRSTAEQVTQHSFFPCSH-LTAIITGGTSGIGAETARVLAKR 60

Query: 61  GVRIVMAARDMKKAAKVRERIKRGGPEAEILMSEIDLSSLASVRRFCMEFAALGLPLNIL 120
           GVR+VMA RDMKKA  V+ERI R  PEA+I++ EIDLSSL+SV RFC +F +  LPLNIL
Sbjct: 61  GVRVVMAVRDMKKAEMVKERIIRENPEADIILFEIDLSSLSSVARFCSQFLSQDLPLNIL 120

Query: 121 INNGGVFSPNLEYSDDKLELTFATNYLGHYLLTELLLDKLIETSRRTGIQGRIINVSSVV 180
           INN GVFSPNLE+S++K+ELTFATN+LGHYLLTE+L++K+I+T+ ++GI+GRIIN+SSV+
Sbjct: 121 INNAGVFSPNLEFSEEKIELTFATNFLGHYLLTEMLIEKMIDTAEKSGIEGRIINLSSVI 180

Query: 181 HCWVKKDDLCFTHLLNP-NKYNGTRAYAQSKLACILHAKEVARQLKVILLLQLLRFLQTV 240
           H WVK D   F  LL+P ++YNGTRAYAQSKLA ILHAK +++QLK              
Sbjct: 181 HNWVKPDCFSFPKLLHPISRYNGTRAYAQSKLATILHAKALSKQLK-------------- 240

Query: 241 DKTVHILKFQPFLQERDANVTINAVHPGIPSSASSTSTKRKMYKRLLIYHNYILTSLADS 300
                         +R+ANVTINAVHPGI  +             ++  H  + T   DS
Sbjct: 241 --------------DRNANVTINAVHPGIVKTG------------IIRAHKGLFT---DS 300

Query: 301 LFFMASKLLKSIPQGAATTCYVALSPQTHRKTGRYFADCNETKCSSLANDELAARTLWIQ 360
           LF +ASKLLKSI QGAATTCYVALS +T   +G+YFADCNET CS LANDE  A  L  Q
Sbjct: 301 LFLIASKLLKSISQGAATTCYVALSNETKGLSGKYFADCNETNCSDLANDEYVALKLCTQ 327

Query: 361 TRALILRELGE 369
           +RALI   L E
Sbjct: 361 SRALIHDHLHE 327

[Close]

BLAST of Carg07663 vs. TAIR10
Match: AT1G64590.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 299.7 bits (766), Expect = 2.5e-81
Identity = 174/364 (47.80%), Postives = 229/364 (62.91%), Query Frame = 0


Query: 1   MKETLRYLVGMAGPSGYGSKSSAEQVTEHLQCSSPLTAIITGATSGIGEETARVLAKRGV 60
           M ET+++L+G  GPSG+GS+S+A+ VT +    S LTAIITGATSGIG ETARVLAKRG 
Sbjct: 1   MIETVKHLIGSGGPSGFGSRSTADHVTCNSDLRS-LTAIITGATSGIGAETARVLAKRGA 60

Query: 61  RIVMAARDMKKAAKVRERIKRGGPEAEILMSEIDLSSLASVRRFCMEFAALGLPLNILIN 120
           R+V+ AR +K A + + RI    P+AEI++  +DLSSL SVRRF  +F +L LPLNILIN
Sbjct: 61  RLVLPARSVKTAEETKARILSEFPDAEIIVMHLDLSSLTSVRRFVDDFESLNLPLNILIN 120

Query: 121 NGGVFSPNLEYSDDKLELTFATNYLGHYLLTELLLDKLIETSRRTGIQGRIINVSSVVHC 180
           N G ++     S+D +E+TFATNYLGH+LLT+LLL K+IET+ +TG+QGRI+NV+SVVH 
Sbjct: 121 NAGKYAHKHALSEDGVEMTFATNYLGHFLLTKLLLKKMIETAAQTGVQGRIVNVTSVVHS 180

Query: 181 WVKKDDLCFTHLLNPN--KYNGTRAYAQSKLACILHAKEVARQLKVILLLQLLRFLQTVD 240
           W   D L +   ++ N   Y+ TRAYA SKLA +LH  E++R                  
Sbjct: 181 WFSGDMLQYLADISRNNRNYDATRAYALSKLANVLHTVELSR------------------ 240

Query: 241 KTVHILKFQPFLQERDANVTINAVHPGIPSSASSTSTKRKMYKRLLIYHNYILTSLADSL 300
                      L + DANVT N VHPGI  +            RL      ++T   D +
Sbjct: 241 ----------LLHKMDANVTANCVHPGIVKT------------RLTRDREGVVT---DLV 300

Query: 301 FFMASKLLKSIPQGAATTCYVALSPQTHRKTGRYFADCNETKCSSLANDELAARTLWIQT 360
           FF+ SKLLKS+PQ AATTCYVA SP+     G+YF+DCNE + S   +  L A+ LW  +
Sbjct: 301 FFLTSKLLKSVPQAAATTCYVATSPRLRNVCGKYFSDCNEARSSKSGSCNLKAQRLWTAS 320

Query: 361 RALI 363
             L+
Sbjct: 361 DLLV 320

[Close]

BLAST of Carg07663 vs. TAIR10
Match: AT4G24050.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 296.6 bits (758), Expect = 2.1e-80
Identity = 169/364 (46.43%), Postives = 231/364 (63.46%), Query Frame = 0


Query: 1   MKETLRYLVGMAGPSGYGSKSSAEQVTEHLQCSSPLTAIITGATSGIGEETARVLAKRGV 60
           M ET +YL+G AG SG+GSKS+AE+VTE+    S +TA+ITGATSGIG ETARVLAKRG 
Sbjct: 1   MIETGKYLLGAAGASGFGSKSTAEEVTENCDLRS-ITAVITGATSGIGAETARVLAKRGA 60

Query: 61  RIVMAARDMKKAAKVRERIKRGGPEAEILMSEIDLSSLASVRRFCMEFAALGLPLNILIN 120
           R++  AR++K A + +ERI    PE EI++ ++DLSS+ASVR F  +F +L LPLN+LIN
Sbjct: 61  RLIFPARNVKAAEEAKERIVSEFPETEIVVMKLDLSSIASVRNFVADFESLDLPLNLLIN 120

Query: 121 NGGVFSPNLEYSDDKLELTFATNYLGHYLLTELLLDKLIETSRRTGIQGRIINVSSVVHC 180
           N G  +     S+D +E+TFATNYLGH+LLT LLL+K+I+T+  TG+QGRI+NV+S +H 
Sbjct: 121 NAGKLAHEHAISEDGIEMTFATNYLGHFLLTNLLLNKMIQTAEETGVQGRIVNVTSGIHG 180

Query: 181 WVKKDDLCFTHLLNPNK--YNGTRAYAQSKLACILHAKEVARQLKVILLLQLLRFLQTVD 240
           W   D + +  L++  K  ++ TRAYA SKLA +LH KE++ +                 
Sbjct: 181 WFSGDLIEYLRLISQPKCQFDATRAYALSKLANVLHTKELSSR----------------- 240

Query: 241 KTVHILKFQPFLQERDANVTINAVHPGIPSSASSTSTKRKMYKRLLIYHNYILTSLADSL 300
                      LQ+  ANVT+N VHPG+            +  RL      +LT   D +
Sbjct: 241 -----------LQKIGANVTVNCVHPGV------------VRTRLTRDREGLLT---DLV 300

Query: 301 FFMASKLLKSIPQGAATTCYVALSPQTHRKTGRYFADCNETKCSSLANDELAARTLWIQT 360
           FF+ASKL+K++PQ AATTCYVA +P+    +G+YF DCNET  S L  +   A  LW  +
Sbjct: 301 FFLASKLVKTVPQAAATTCYVATNPRLVNVSGKYFTDCNETTPSGLGTNSSEATKLWAAS 320

Query: 361 RALI 363
             L+
Sbjct: 361 EILV 320

[Close]

BLAST of Carg07663 vs. TAIR10
Match: AT5G02540.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 262.7 bits (670), Expect = 3.4e-70
Identity = 153/348 (43.97%), Postives = 205/348 (58.91%), Query Frame = 0


Query: 8   LVGMAGPSGYGSKSSAEQVTEHLQCSSPLTAIITGATSGIGEETARVLAKRGVRIVMAAR 67
           + G  GPSG+GS S+AE+VT+ +  ++ LTAIITG T GIG ETARVL+KRG  +V+ AR
Sbjct: 7   ITGRRGPSGFGSASTAEEVTQGIDATN-LTAIITGGTGGIGMETARVLSKRGAHVVIGAR 66

Query: 68  DMKKAAKVRERIKRGGPEAEILMSEIDLSSLASVRRFCMEFAALGLPLNILINNGGVFSP 127
           +M  A   +  I R    A + + ++DLSS+ S++ F  EF AL LPLN+LINN GV   
Sbjct: 67  NMGAAENAKTEILRQNANARVTLLQLDLSSIKSIKAFVREFHALHLPLNLLINNAGVMFC 126

Query: 128 NLEYSDDKLELTFATNYLGHYLLTELLLDKLIETSRRTGIQGRIINVSSVVHCWVKKDDL 187
             + S+D +EL FATN++GH+LLT LLLD +  T++ +G++GRI+NVSSV H +  ++ +
Sbjct: 127 PYQLSEDGIELQFATNHIGHFLLTNLLLDTMKNTAKTSGVEGRILNVSSVAHIYTYQEGI 186

Query: 188 CFTHLLNPNKYNGTRAYAQSKLACILHAKEVARQLKVILLLQLLRFLQTVDKTVHILKFQ 247
            F  + +   Y+  RAY QSKLA ILHA E++RQ                          
Sbjct: 187 QFDSINDICSYSDKRAYGQSKLANILHANELSRQ-------------------------- 246

Query: 248 PFLQERDANVTINAVHPGIPSSASSTSTKRKMYKRLLIYHNYILTSLADSLFFMASKLLK 307
             LQE   N+T N+VHPG+  +              L  H  +L      L F +  L K
Sbjct: 247 --LQEEGVNITANSVHPGLILTN-------------LFQHTALLMRF---LKFFSFYLWK 306

Query: 308 SIPQGAATTCYVALSPQTHRKTGRYFADCNETKCSSLANDELAARTLW 356
           +IPQGAATTCYVAL P     TG+YFADCNE   S LA DE  A+ LW
Sbjct: 307 NIPQGAATTCYVALHPSVKGVTGKYFADCNEVTPSKLARDETLAQKLW 309

[Close]

BLAST of Carg07663 vs. TAIR10
Match: AT2G37540.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 242.3 bits (617), Expect = 4.8e-64
Identity = 143/348 (41.09%), Postives = 198/348 (56.90%), Query Frame = 0


Query: 8   LVGMAGPSGYGSKSSAEQVTEHLQCSSPLTAIITGATSGIGEETARVLAKRGVRIVMAAR 67
           + G  G SG+GS S+AE VT+ +  +S LTAIITG TSGIG E ARVLA RG  +++AAR
Sbjct: 7   MTGKKGKSGFGSASTAEDVTQAID-ASHLTAIITGGTSGIGLEAARVLAMRGAHVIIAAR 66

Query: 68  DMKKAAKVRERIKRGGPEAEILMSEIDLSSLASVRRFCMEFAALGLPLNILINNGGVFSP 127
           + K A + +E I +  P A +   +ID+SS+ SVR F  +F AL +PLNILINN GV   
Sbjct: 67  NPKAANESKEMILQMNPNARVDYLQIDVSSIKSVRSFVDQFLALNVPLNILINNAGVMFC 126

Query: 128 NLEYSDDKLELTFATNYLGHYLLTELLLDKLIETSRRTGIQGRIINVSSVVHCWVKKDDL 187
             + ++D +E  FATN++GH+LLT LLLDK+  T+R +G+QGRI+N+SS+ H +   + +
Sbjct: 127 PFKLTEDGIESQFATNHIGHFLLTNLLLDKMKSTARESGVQGRIVNLSSIAHTYTYSEGI 186

Query: 188 CFTHLLNPNKYNGTRAYAQSKLACILHAKEVARQLKVILLLQLLRFLQTVDKTVHILKFQ 247
            F  + +P  Y+  RAY QSKL+ +LH+  ++R+                          
Sbjct: 187 KFQGINDPAGYSERRAYGQSKLSNLLHSNALSRR-------------------------- 246

Query: 248 PFLQERDANVTINAVHPGIPSSASSTSTKRKMYKRLLIYHNYILTSLADSLFFMASKLLK 307
             LQE   N+TIN+VHPG+ ++             L  Y  + +       F       K
Sbjct: 247 --LQEEGVNITINSVHPGLVTT------------NLFRYSGFSMKVFRAMTFL----FWK 306

Query: 308 SIPQGAATTCYVALSPQTHRKTGRYFADCNETKCSSLANDELAARTLW 356
           +IPQGAATTCYVAL P     TG+YF DCN    S  A +   A  LW
Sbjct: 307 NIPQGAATTCYVALHPDLEGVTGKYFGDCNIVAPSKFATNNSLADKLW 309

[Close]

BLAST of Carg07663 vs. Swiss-Prot
Match: sp|A2RVM0|TIC32_ARATH (Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC32 PE=2 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 8.7e-63
Identity = 150/362 (41.44%), Postives = 208/362 (57.46%), Query Frame = 0


Query: 7   YLVGMAGPSGYGSKSSAEQVTEHLQCSSPLTAIITGATSGIGEETARVLAKRGVRIVMAA 66
           +  G  G SG+ S+S+AE+VT H    + LTAI+TGA+SGIG ETARVL+ RGV +VMA 
Sbjct: 2   WFFGSKGASGFSSRSTAEEVT-HGVDGTGLTAIVTGASSGIGVETARVLSLRGVHVVMAV 61

Query: 67  RDMKKAAKVRERIKRGGPEAEILMSEIDLSSLASVRRFCMEFAALGLPLNILINNGGVFS 126
           R+    AKV+E I +  P A++ + E+DLSS+ SVR+F  E+ + GLPLN+LINN G+ +
Sbjct: 62  RNTDSGAKVKEDIVKQVPGAKLDVMELDLSSMQSVRKFASEYKSTGLPLNLLINNAGIMA 121

Query: 127 PNLEYSDDKLELTFATNYLGHYLLTELLLDKLIETSRRTGIQGRIINVSSVVHCWVKKDD 186
                S D +EL FATN+LGH+LLT+LLLD +  TSR +  +GRI+N+SS  H +   + 
Sbjct: 122 CPFMLSKDNIELQFATNHLGHFLLTKLLLDTMKSTSRESKREGRIVNLSSEAHRFSYPEG 181

Query: 187 LCFTHLLNPNKYNGTRAYAQSKLACILHAKEVARQLKVILLLQLLRFLQTVDKTVHILKF 246
           + F  + + + Y+  RAY QSKL  +LHA E+ +QLK                       
Sbjct: 182 VRFDKINDKSSYSSMRAYGQSKLCNVLHANELTKQLK----------------------- 241

Query: 247 QPFLQERDANVTINAVHPGIPSSASSTSTKRKMYKRLLIYHNYILTSLADSLFFMASKLL 306
                E   N+T N++HPG    A  T+  R           Y    LA ++  +A  +L
Sbjct: 242 -----EDGVNITANSLHPG----AIMTNLGR-----------YFNPYLAVAVGAVAKYIL 301

Query: 307 KSIPQGAATTCYVALSPQTHRKTGRYFADCNETKCSSLANDELAARTLWIQTRALILREL 366
           KS+PQGAATTCYVAL+PQ    +G YF D N  K   L  D   A+ +W  +  L   + 
Sbjct: 302 KSVPQGAATTCYVALNPQVAGVSGEYFQDSNIAKPLPLVKDTELAKKVWDFSTKLTDSQS 319

Query: 367 GE 369
           GE
Sbjct: 362 GE 319

[Close]

BLAST of Carg07663 vs. Swiss-Prot
Match: sp|Q6RVV4|TIC32_PEA (Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum OX=3888 GN=TIC32 PE=1 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.9e-57
Identity = 135/343 (39.36%), Postives = 191/343 (55.69%), Query Frame = 0


Query: 13  GPSGYGSKSSAEQVTEHLQCSSPLTAIITGATSGIGEETARVLAKRGVRIVMAARDMKKA 72
           G SG+   S+AEQVT  +  +  LTAI+TGA+SGIG ET RVLA RG  ++M  R+M  A
Sbjct: 9   GVSGFSGSSTAEQVTHGIDATG-LTAIVTGASSGIGAETTRVLALRGAHVIMGVRNMVAA 68

Query: 73  AKVRERIKRGGPEAEILMSEIDLSSLASVRRFCMEFAALGLPLNILINNGGVFSPNLEYS 132
             V++ I +  P A++   E+DLSSL SV++F  EF + G PLNILINN G+ +   + S
Sbjct: 69  KDVKDTILKDIPSAKVDAIELDLSSLDSVKKFASEFNSSGRPLNILINNAGIMACPFKLS 128

Query: 133 DDKLELTFATNYLGHYLLTELLLDKLIETSRRTGIQGRIINVSSVVHCWVKKDDLCFTHL 192
            D +EL FATN++GH+LLT LLLD + +T+R +  +GRI+NV+S  H +   + + F  +
Sbjct: 129 KDNIELQFATNHIGHFLLTNLLLDTMKKTTRESKKEGRIVNVASEAHRFAYPEGIRFDKI 188

Query: 193 LNPNKYNGTRAYAQSKLACILHAKEVARQLKVILLLQLLRFLQTVDKTVHILKFQPFLQE 252
            + + YN  RAY QSKLA +LHA ++ + LK                            E
Sbjct: 189 NDQSSYNNWRAYGQSKLANVLHANQLTKHLK----------------------------E 248

Query: 253 RDANVTINAVHPGIPSSASSTSTKRKMYKRLLIYHNYILTSLADSLFFMASKLLKSIPQG 312
              N+T N++HPG   +              L  HN  +  L +    +   +LK++ QG
Sbjct: 249 DGVNITANSLHPGTIVTN-------------LFRHNSAVNGLIN---VIGKLVLKNVQQG 306

Query: 313 AATTCYVALSPQTHRKTGRYFADCNETKCSSLANDELAARTLW 356
           AATTCYVAL PQ    +G YF+D N  K +    D   A+ LW
Sbjct: 309 AATTCYVALHPQVKGVSGEYFSDSNVYKTTPHGKDVDLAKKLW 306

[Close]

BLAST of Carg07663 vs. Swiss-Prot
Match: sp|Q9HBH5|RDH14_HUMAN (Retinol dehydrogenase 14 OS=Homo sapiens OX=9606 GN=RDH14 PE=1 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 6.2e-37
Identity = 115/332 (34.64%), Postives = 166/332 (50.00%), Query Frame = 0


Query: 37  TAIITGATSGIGEETARVLAKRGVRIVMAARDMKKAAKVRERIKRG-------GPE---- 96
           T +ITGA SG+G  TA  L + G R++M  RD  +A +   +++R        GPE    
Sbjct: 45  TVLITGANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLRRELRQAAECGPEPGVS 104

Query: 97  --AEILMSEIDLSSLASVRRFCMEFAALGLPLNILINNGGVFSPNLEYSDDKLELTFATN 156
              E+++ E+DL+SL SVR FC E       L++LINN G+F      ++D  E+ F  N
Sbjct: 105 GVGELIVRELDLASLRSVRAFCQEMLQEEPRLDVLINNAGIFQCPYMKTEDGFEMQFGVN 164

Query: 157 YLGHYLLTELLLDKLIETSRRTGIQGRIINVSSVVHCWVKKDDLCFTHLLNPNKYNGTRA 216
           +LGH+LLT LLL  L     ++    RI+ VSS ++   K  D+ F  L +   YN +  
Sbjct: 165 HLGHFLLTNLLLGLL-----KSSAPSRIVVVSSKLY---KYGDINFDDLNSEQSYNKSFC 224

Query: 217 YAQSKLACILHAKEVARQLKVILLLQLLRFLQTVDKTVHILKFQPFLQERDANVTINAVH 276
           Y++SKLA IL  +E+AR+L+                                NVT+N +H
Sbjct: 225 YSRSKLANILFTRELARRLE------------------------------GTNVTVNVLH 284

Query: 277 PGIPSSASSTSTKRKMYKRLLIYHNYILTSLADSLFFMASKLLKSIPQGAATTCYVALSP 336
           PGI      T+  R ++  LL+   + L S A   FF      K+  +GA T+ Y+A SP
Sbjct: 285 PGI----VRTNLGRHIHIPLLVKPLFNLVSWA---FF------KTPVEGAQTSIYLASSP 325

Query: 337 QTHRKTGRYFADCNETKCSSLANDELAARTLW 356
           +    +GRYF DC E +    A DE  AR LW
Sbjct: 345 EVEGVSGRYFGDCKEEELLPKAMDESVARKLW 325

[Close]

BLAST of Carg07663 vs. Swiss-Prot
Match: sp|Q9ERI6|RDH14_MOUSE (Retinol dehydrogenase 14 OS=Mus musculus OX=10090 GN=Rdh14 PE=1 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.5e-35
Identity = 111/329 (33.74%), Postives = 163/329 (49.54%), Query Frame = 0


Query: 37  TAIITGATSGIGEETARVLAKRGVRIVMAARDMKKAAKVRERIKR----------GGPEA 96
           T +ITGA SG+G  TA  L + G R++M  RD  +A +   ++++           G + 
Sbjct: 46  TVLITGANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLRQELCQAGGAGPDGTDG 105

Query: 97  EILMSEIDLSSLASVRRFCMEFAALGLPLNILINNGGVFSPNLEYSDDKLELTFATNYLG 156
           ++++ E+DL+SL SVR FC E       L++LINN GVF      ++D  E+ F  N+LG
Sbjct: 106 QLVVKELDLASLRSVRAFCQELLQEEPRLDVLINNAGVFHCPYTKTEDGFEMQFGVNHLG 165

Query: 157 HYLLTELLLDKLIETSRRTGIQGRIINVSSVVHCWVKKDDLCFTHLLNPNKYNGTRAYAQ 216
           H+LLT LLL  L     ++    RI+ VSS ++   K  ++ F  L +   YN +  Y++
Sbjct: 166 HFLLTNLLLGLL-----KSSAPSRIVVVSSKLY---KYGEINFEDLNSEQSYNKSFCYSR 225

Query: 217 SKLACILHAKEVARQLKVILLLQLLRFLQTVDKTVHILKFQPFLQERDANVTINAVHPGI 276
           SKLA IL  +E+AR+L+                                NVT+N +HPGI
Sbjct: 226 SKLANILFTRELARRLE------------------------------GTNVTVNVLHPGI 285

Query: 277 PSSASSTSTKRKMYKRLLIYHNYILTSLADSLFFMASKLLKSIPQGAATTCYVALSPQTH 336
                 T+  R ++  LL    + L S A   FF      K+  +GA T+ Y+A SP   
Sbjct: 286 ----VRTNLGRHIHIPLLARPLFNLVSWA---FF------KTPLEGAQTSIYLACSPDVE 323

Query: 337 RKTGRYFADCNETKCSSLANDELAARTLW 356
             +GRYF DC E +    A DE  AR LW
Sbjct: 346 GVSGRYFGDCKEEELLPKAMDESVARKLW 323

[Close]

BLAST of Carg07663 vs. Swiss-Prot
Match: sp|Q8BYK4|RDH12_MOUSE (Retinol dehydrogenase 12 OS=Mus musculus OX=10090 GN=Rdh12 PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 6.5e-34
Identity = 106/317 (33.44%), Postives = 150/317 (47.32%), Query Frame = 0


Query: 39  IITGATSGIGEETARVLAKRGVRIVMAARDMKKAAKVRERIKRGGPEAEILMSEIDLSSL 98
           +ITGA +GIG+ETAR LA+RG R+ +A RD+ K       I+     +++L+ ++DLS  
Sbjct: 43  VITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIRADTKNSQVLVRKLDLSDT 102

Query: 99  ASVRRFCMEFAALGLPLNILINNGGVFSPNLEYSDDKLELTFATNYLGHYLLTELLLDKL 158
            S+R F   F A    L+ILINN GV       + D  E  F  N+LGH+LLT LLL++L
Sbjct: 103 KSIRAFAERFLAEEKKLHILINNAGVMMCPYSKTTDGFETHFGVNHLGHFLLTYLLLERL 162

Query: 159 IETSRRTGIQGRIINVSSVVHCWVKKDDLCFTHLLNPNKYNGTRAYAQSKLACILHAKEV 218
            E++       R++N+SS+ H   K   + F  L    +Y    AY  SKLA +L  +E+
Sbjct: 163 KESA-----PARVVNLSSIAHLIGK---IRFHDLQGQKRYCSAFAYGHSKLANLLFTREL 222

Query: 219 ARQLKVILLLQLLRFLQTVDKTVHILKFQPFLQERDANVTINAVHPGIPSSASSTSTKRK 278
           A++L                              +   VT  AVHPG+  S         
Sbjct: 223 AKRL------------------------------QGTGVTAYAVHPGVVLSE-------- 282

Query: 279 MYKRLLIYHNYILTSLADSLFFMASKLLKSIPQGAATTCYVALSPQTHRKTGRYFADCNE 338
                 I  N  L  L   LF   S   KS  QGA T+ + AL+      +G+YF+DC  
Sbjct: 283 ------ITRNSYLLCLLWRLF---SPFFKSTSQGAQTSLHCALAEDLEPLSGKYFSDCKR 304

Query: 339 TKCSSLANDELAARTLW 356
              SS A ++  A  LW
Sbjct: 343 MWVSSRARNKKTAERLW 304

[Close]

BLAST of Carg07663 vs. TrEMBL
Match: tr|V4TIE0|V4TIE0_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10021085mg PE=3 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 1.7e-116
Identity = 229/369 (62.06%), Postives = 274/369 (74.25%), Query Frame = 0


Query: 1   MKETLRYLVGMAGPSGYGSKSSAEQVTEHLQCSSPLTAIITGATSGIGEETARVLAKRGV 60
           MKETLRYL G+AGPSGYGSKS+AEQVT+    +S LTAIITGATSGIG ETARVLAKRGV
Sbjct: 1   MKETLRYLAGIAGPSGYGSKSTAEQVTQG-SVASHLTAIITGATSGIGAETARVLAKRGV 60

Query: 61  RIVMAARDMKKAAKVRERIKRGGPEAEILMSEIDLSSLASVRRFCMEFAALGLPLNILIN 120
           R+V+ ARD+K+AA+V+E I+R  P AE+L+ EIDLSSL SV+RFC +F ALGLPLNILIN
Sbjct: 61  RVVIPARDLKRAAEVKEGIQRESPNAEVLLFEIDLSSLVSVQRFCHQFLALGLPLNILIN 120

Query: 121 NGGVFSPNLEYSDDKLELTFATNYLGHYLLTELLLDKLIETSRRTGIQGRIINVSSVVHC 180
           N GV+S NLE+S+DK+E+TFATNYLGHYLLTE++L+K+IET+  TG+QGRIIN+SSV+H 
Sbjct: 121 NAGVYSKNLEFSEDKIEMTFATNYLGHYLLTEMVLEKMIETAAETGVQGRIINLSSVIHS 180

Query: 181 WVKKDDLCFTHLLNPNKYNGTRAYAQSKLACILHAKEVARQLKVILLLQLLRFLQTVDKT 240
           WVK+DD CFT LLNP  YNGT AYAQSKLA I+HAKE++RQLK                 
Sbjct: 181 WVKRDDFCFTRLLNPKNYNGTCAYAQSKLATIMHAKEMSRQLKA---------------- 240

Query: 241 VHILKFQPFLQERDANVTINAVHPGIPSSASSTSTKRKMYKRLLIYHNYILTSLADSLFF 300
                       R+A VTIN VHPGI  +             ++  H   +T   DSLFF
Sbjct: 241 ------------RNARVTINVVHPGIVKTG------------IIRAHKGFIT---DSLFF 300

Query: 301 MASKLLKSIPQGAATTCYVALSPQTHRKTGRYFADCNETKCSSLANDELAARTLWIQTRA 360
           +ASKLLKSI QGA+TTCY ALSPQ    +G+YFADCNE+ CS+LANDE  A+ LW QTRA
Sbjct: 301 IASKLLKSISQGASTTCYAALSPQIEGVSGKYFADCNESNCSALANDESEAKKLWKQTRA 325

Query: 361 LILRELGEP 370
           LI R L +P
Sbjct: 361 LIHRRLRQP 325

[Close]

BLAST of Carg07663 vs. TrEMBL
Match: tr|A0A1S3CLP7|A0A1S3CLP7_CUCME (short-chain dehydrogenase TIC 32, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502388 PE=3 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 1.7e-116
Identity = 236/370 (63.78%), Postives = 276/370 (74.59%), Query Frame = 0


Query: 1   MKETLRYLVGMAGPSGYGSKSSAEQVT--EHLQCSSPLTAIITGATSGIGEETARVLAKR 60
           MK+TLRYL G+ GPSGYGSKS+AEQV+       SS LTAIITGATSGIG ETARVLAKR
Sbjct: 34  MKDTLRYLAGIPGPSGYGSKSTAEQVSLFSSSSSSSQLTAIITGATSGIGAETARVLAKR 93

Query: 61  GVRIVMAARDMKKAAKVRERIKRGGPEAEILMSEIDLSSLASVRRFCMEFAALGLPLNIL 120
           GV+IVM ARD+KKAA+V+E I++  PEAEI++ EIDLSSLASV+ FC +F +LGLPLNIL
Sbjct: 94  GVKIVMTARDLKKAAQVKEAIQKESPEAEIIVFEIDLSSLASVQSFCNQFLSLGLPLNIL 153

Query: 121 INNGGVFSPNLEYSDDKLELTFATNYLGHYLLTELLLDKLIETSRRTGIQGRIINVSSVV 180
           INN GVFS NLE+S+DK+ELTFATNYLGHYLLTE LL+K+IET+ +TGI+GRIINVSSVV
Sbjct: 154 INNAGVFSKNLEFSEDKVELTFATNYLGHYLLTERLLEKMIETAAKTGIEGRIINVSSVV 213

Query: 181 HCWVKKDDLCFTHLLNPNKYNGTRAYAQSKLACILHAKEVARQLKVILLLQLLRFLQTVD 240
           H WVKKD L F  +LNPN+YNGTRAYAQSKLA ILHAKE++RQ                 
Sbjct: 214 HGWVKKDGLSFRQMLNPNRYNGTRAYAQSKLANILHAKELSRQ----------------- 273

Query: 241 KTVHILKFQPFLQERDANVTINAVHPGIPSSASSTSTKRKMYKRLLIYHNYILTSLADSL 300
                      LQ R+A VTINAVHPGI  +A            ++  H   +T   DSL
Sbjct: 274 -----------LQGRNARVTINAVHPGIVKTA------------IIRAHKGFIT---DSL 333

Query: 301 FFMASKLLKSIPQGAATTCYVALSPQTHRKTGRYFADCNETKCSSLANDELAARTLWIQT 360
           FFMASKLLK+  QGA+TTCYVALS QT  K+G+++ADCNET CSSLANDEL A+ LW QT
Sbjct: 334 FFMASKLLKTTSQGASTTCYVALSSQTEGKSGKFYADCNETNCSSLANDELEAQKLWTQT 360

Query: 361 RALILRELGE 369
           R LI R L +
Sbjct: 394 RNLINRRLSK 360

[Close]

BLAST of Carg07663 vs. TrEMBL
Match: tr|A0A2P5FFY3|A0A2P5FFY3_9ROSA (Short-chain dehydrogenase/reductase OS=Trema orientalis OX=63057 GN=TorRG33x02_073970 PE=3 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 8.5e-116
Identity = 230/371 (61.99%), Postives = 270/371 (72.78%), Query Frame = 0


Query: 1   MKETLRYLVGMAGPSGYGSKSSAEQVTEHLQCSSP--LTAIITGATSGIGEETARVLAKR 60
           MKETLRYL G+AGPSGYGSKS+AEQVT +   S P  LTAIITGATSGIG ETARVLAKR
Sbjct: 1   MKETLRYLTGIAGPSGYGSKSTAEQVTANCSSSLPSHLTAIITGATSGIGAETARVLAKR 60

Query: 61  GVRIVMAARDMKKAAKVRERIKRGGPEAEILMSEIDLSSLASVRRFCMEFAALGLPLNIL 120
           GVR+V+ ARD+ +AA+V+E I+R  P+AE+++ EIDLSS ASV+RFC EF ALGLPLNIL
Sbjct: 61  GVRVVIPARDLIRAAEVKEGIQRETPKAEVIVLEIDLSSFASVKRFCSEFLALGLPLNIL 120

Query: 121 INNGGVFSPNLEYSDDKLELTFATNYLGHYLLTELLLDKLIETSRRTGIQGRIINVSSVV 180
           INN G+FS  LEYSDDK+E+TFATNYLGHYLLT+LLL+K++ET+ +TG+QGRIINVSS++
Sbjct: 121 INNAGIFSQTLEYSDDKIEMTFATNYLGHYLLTDLLLEKMVETAAQTGVQGRIINVSSMI 180

Query: 181 HCWVKKDDLCFTHLLNPNKYNGTRAYAQSKLACILHAKEVARQLKVILLLQLLRFLQTVD 240
           H WVKKD   FT +L P  YNGTRAYAQSKLA +LHAKE+ARQLK               
Sbjct: 181 HSWVKKDTFRFTEMLIPKSYNGTRAYAQSKLASVLHAKEIARQLKA-------------- 240

Query: 241 KTVHILKFQPFLQERDANVTINAVHPGIPSSASSTSTKRKMYKRLLIYHNYILTSLADSL 300
                         R+A VTINAVHPGI  +             ++  H  I+T    S+
Sbjct: 241 --------------RNARVTINAVHPGIVKTG------------IIRAHKSIITG-KYSV 300

Query: 301 FFMASKLLKSIPQGAATTCYVALSPQTHRKTGRYFADCNETKCSSLANDELAARTLWIQT 360
           FFMASKLLKS+ QGAATTCYVALSPQT    G+YF DCNE+ CS LANDE  A  LW QT
Sbjct: 301 FFMASKLLKSVSQGAATTCYVALSPQTEEVNGKYFVDCNESSCSPLANDESEAHNLWKQT 330

Query: 361 RALILRELGEP 370
           RAL+ R L  P
Sbjct: 361 RALLHRRLCHP 330

[Close]

BLAST of Carg07663 vs. TrEMBL
Match: tr|A0A1R3FVK0|A0A1R3FVK0_COCAP (Short-chain dehydrogenase/reductase SDR OS=Corchorus capsularis OX=210143 GN=CCACVL1_30774 PE=3 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 2.8e-114
Identity = 227/367 (61.85%), Postives = 273/367 (74.39%), Query Frame = 0


Query: 1   MKETLRYLVGMAGPSGYGSKSSAEQVTEHLQCSS-PLTAIITGATSGIGEETARVLAKRG 60
           MKETLRYL G+AGPSG+GSKS+AEQVT+    S   LTAIITGATSGIG ETARVLAKRG
Sbjct: 1   MKETLRYLAGIAGPSGFGSKSTAEQVTQISSNSMVQLTAIITGATSGIGAETARVLAKRG 60

Query: 61  VRIVMAARDMKKAAKVRERIKRGGPEAEILMSEIDLSSLASVRRFCMEFAALGLPLNILI 120
           VR+V+ ARD+KKA +++ERI +  P A+I++SEIDLSSLASV+RFC EF ALGLPLNILI
Sbjct: 61  VRVVIPARDLKKAVELKERILKESPNAKIILSEIDLSSLASVKRFCTEFLALGLPLNILI 120

Query: 121 NNGGVFSPNLEYSDDKLELTFATNYLGHYLLTELLLDKLIETSRRTGIQGRIINVSSVVH 180
           NN G+FS  LE+S+DK+E+TFATNYLGHYLLTE+LL+K+IET+ +TGIQGRIIN+SSV+H
Sbjct: 121 NNAGIFSQKLEFSEDKIEMTFATNYLGHYLLTEMLLEKMIETAEQTGIQGRIINLSSVIH 180

Query: 181 CWVKKDDLCFTHLLNPNKYNGTRAYAQSKLACILHAKEVARQLKVILLLQLLRFLQTVDK 240
            WVK+D  CF+ +LNPN YNGTRAYAQSKLA ILHAKE+ARQLK                
Sbjct: 181 SWVKRDSFCFSQMLNPNNYNGTRAYAQSKLANILHAKEIARQLKA--------------- 240

Query: 241 TVHILKFQPFLQERDANVTINAVHPGIPSSASSTSTKRKMYKRLLIYHNYILTSLADSLF 300
                        ++A VTINAVHPGI  +             ++  H   +T   DSLF
Sbjct: 241 -------------KNAKVTINAVHPGIVKTG------------IIRAHKGFIT---DSLF 300

Query: 301 FMASKLLKSIPQGAATTCYVALSPQTHRKTGRYFADCNETKCSSLANDELAARTLWIQTR 360
           F+ASKLLKS  QGA+T+CYVALS +T   +G+YFADCNE+ CS+LANDE  A+ LW  TR
Sbjct: 301 FIASKLLKSTSQGASTSCYVALSQKTEGISGKYFADCNESNCSALANDESQAQRLWRHTR 324

Query: 361 ALILREL 367
           ALI R L
Sbjct: 361 ALIHRRL 324

[Close]

BLAST of Carg07663 vs. TrEMBL
Match: tr|A0A2P5DG23|A0A2P5DG23_PARAD (Short-chain dehydrogenase/reductase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_066300 PE=3 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 2.8e-114
Identity = 229/371 (61.73%), Postives = 269/371 (72.51%), Query Frame = 0


Query: 1   MKETLRYLVGMAGPSGYGSKSSAEQVTEHLQCSSP--LTAIITGATSGIGEETARVLAKR 60
           MKETLRYL G+AGPSGYGSKS+AEQVT +   S P  LTAIITGATSGIG ETARVLA R
Sbjct: 1   MKETLRYLTGIAGPSGYGSKSTAEQVTANCFSSRPPRLTAIITGATSGIGAETARVLAMR 60

Query: 61  GVRIVMAARDMKKAAKVRERIKRGGPEAEILMSEIDLSSLASVRRFCMEFAALGLPLNIL 120
           GVR+V+ ARD+ +AA+V+E I+R  P+AE+++ EIDLSS ASV+RFC EF ALGLPLNIL
Sbjct: 61  GVRVVIPARDLIRAAEVKEGIQRETPKAEVIVLEIDLSSFASVKRFCSEFFALGLPLNIL 120

Query: 121 INNGGVFSPNLEYSDDKLELTFATNYLGHYLLTELLLDKLIETSRRTGIQGRIINVSSVV 180
           INN G+FS  LEYSDDK+E+TFATNYLGHYLLT+LLL+K++ET+ +TG+QGRIINVSS++
Sbjct: 121 INNAGIFSQTLEYSDDKIEMTFATNYLGHYLLTDLLLEKMVETAAQTGVQGRIINVSSMI 180

Query: 181 HCWVKKDDLCFTHLLNPNKYNGTRAYAQSKLACILHAKEVARQLKVILLLQLLRFLQTVD 240
           H WVKKD   FT +L P  YNGTRAYAQSKLA +LHAKE+ARQLK               
Sbjct: 181 HSWVKKDTFRFTEMLIPKCYNGTRAYAQSKLASVLHAKEIARQLKA-------------- 240

Query: 241 KTVHILKFQPFLQERDANVTINAVHPGIPSSASSTSTKRKMYKRLLIYHNYILTSLADSL 300
                         R+A VTINAVHPGI  +             ++  H  I+T    S+
Sbjct: 241 --------------RNARVTINAVHPGIVKTG------------IIRAHKSIITG-KYSV 300

Query: 301 FFMASKLLKSIPQGAATTCYVALSPQTHRKTGRYFADCNETKCSSLANDELAARTLWIQT 360
           FFMASKLLKS+ QGAATTCYVALSPQT    G+YF DCNE+ CS LANDE  A  LW QT
Sbjct: 301 FFMASKLLKSVSQGAATTCYVALSPQTEEVNGKYFVDCNESSCSPLANDESEAHKLWKQT 330

Query: 361 RALILRELGEP 370
           RAL+ R L  P
Sbjct: 361 RALLHRRLCHP 330

The following BLAST results are available for this feature:

BLAST of Carg07663 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022924073.1	1.4e-165	85.41	short-chain dehydrogenase TIC 32, chloroplastic-like [Cucurbita moschata]	[more]
XP_023000696.1	1.8e-162	84.05	short-chain dehydrogenase TIC 32, chloroplastic-like [Cucurbita maxima]	[more]
XP_023519347.1	5.0e-160	82.70	short-chain dehydrogenase TIC 32, chloroplastic-like [Cucurbita pepo subsp. pepo...	[more]
XP_022137126.1	3.6e-142	74.46	short-chain dehydrogenase TIC 32, chloroplastic-like [Momordica charantia]	[more]
XP_022134670.1	2.5e-119	63.90	short-chain dehydrogenase TIC 32, chloroplastic-like [Momordica charantia]	[more]

BLAST of Carg07663 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G50130.1	4.4e-110	59.57	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT1G64590.1	2.5e-81	47.80	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT4G24050.1	2.1e-80	46.43	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT5G02540.1	3.4e-70	43.97	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT2G37540.1	4.8e-64	41.09	NAD(P)-binding Rossmann-fold superfamily protein	[more]

BLAST of Carg07663 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|A2RVM0\|TIC32_ARATH	8.7e-63	41.44	Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q6RVV4\|TIC32_PEA	1.9e-57	39.36	Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum OX=3888 GN=TIC3...	[more]
sp\|Q9HBH5\|RDH14_HUMAN	6.2e-37	34.64	Retinol dehydrogenase 14 OS=Homo sapiens OX=9606 GN=RDH14 PE=1 SV=1	[more]
sp\|Q9ERI6\|RDH14_MOUSE	1.5e-35	33.74	Retinol dehydrogenase 14 OS=Mus musculus OX=10090 GN=Rdh14 PE=1 SV=1	[more]
sp\|Q8BYK4\|RDH12_MOUSE	6.5e-34	33.44	Retinol dehydrogenase 12 OS=Mus musculus OX=10090 GN=Rdh12 PE=2 SV=1	[more]

BLAST of Carg07663 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|V4TIE0\|V4TIE0_9ROSI	1.7e-116	62.06	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10021085mg PE=3 ...	[more]
tr\|A0A1S3CLP7\|A0A1S3CLP7_CUCME	1.7e-116	63.78	short-chain dehydrogenase TIC 32, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A2P5FFY3\|A0A2P5FFY3_9ROSA	8.5e-116	61.99	Short-chain dehydrogenase/reductase OS=Trema orientalis OX=63057 GN=TorRG33x02_0...	[more]
tr\|A0A1R3FVK0\|A0A1R3FVK0_COCAP	2.8e-114	61.85	Short-chain dehydrogenase/reductase SDR OS=Corchorus capsularis OX=210143 GN=CCA...	[more]
tr\|A0A2P5DG23\|A0A2P5DG23_PARAD	2.8e-114	61.73	Short-chain dehydrogenase/reductase OS=Parasponia andersonii OX=3476 GN=PanWU01x...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036291	NAD(P)-bd_dom_sf
IPR002347	SDR_fam

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07663-RA	Carg07663-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00081	GDHRDH	coord: 255..272 score: 26.9 coord: 113..124 score: 39.38 coord: 163..179 score: 32.7 coord: 37..54 score: 44.95
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00080	SDRFAMILY	coord: 204..223 score: 26.08 coord: 169..177 score: 61.15 coord: 113..124 score: 38.63
IPR002347	Short-chain dehydrogenase/reductase SDR	PFAM	PF00106	adh_short	coord: 37..178 e-value: 1.6E-25 score: 89.7
None	No IPR available	GENE3D	G3DSA:3.40.50.720		coord: 26..365 e-value: 2.2E-64 score: 219.3
None	No IPR available	PANTHER	PTHR24320	FAMILY NOT NAMED	coord: 6..223 coord: 241..364
None	No IPR available	PANTHER	PTHR24320:SF120	RIBITOL DEHYDROGENASE-LIKE	coord: 6..223 coord: 241..364
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	SSF51735	NAD(P)-binding Rossmann-fold domains	coord: 37..226 coord: 307..340 coord: 253..277

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg07663	Cla003447	Watermelon (97103) v1	carwmB1005
Carg07663	Cla019215	Watermelon (97103) v1	carwmB1008
Carg07663	Csa1G004220	Cucumber (Chinese Long) v2	carcuB1018
Carg07663	MELO3C026276	Melon (DHL92) v3.5.1	carmeB0979
Carg07663	ClCG06G017210	Watermelon (Charleston Gray)	carwcgB0982
Carg07663	ClCG01G013360	Watermelon (Charleston Gray)	carwcgB0978
Carg07663	CSPI01G01170	Wild cucumber (PI 183967)	carcpiB1042
Carg07663	Cucsa.196670	Cucumber (Gy14) v1	carcgyB1123
Carg07663	CmaCh10G001110	Cucurbita maxima (Rimu)	carcmaB1390
Carg07663	CmaCh13G008710	Cucurbita maxima (Rimu)	carcmaB1393
Carg07663	CmoCh13G009030	Cucurbita moschata (Rifu)	carcmoB1349
Carg07663	CmoCh10G001150	Cucurbita moschata (Rifu)	carcmoB1345
Carg07663	Lsi02G003950	Bottle gourd (USVL1VR-Ls)	carlsiB919
Carg07663	Lsi06G015730	Bottle gourd (USVL1VR-Ls)	carlsiB921
Carg07663	Cp4.1LG18g08540	Cucurbita pepo (Zucchini)	carcpeB1399
Carg07663	Cp4.1LG20g02610	Cucurbita pepo (Zucchini)	carcpeB1401
Carg07663	CsGy1G001230	Cucumber (Gy14) v2	carcgybB0990
Carg07663	MELO3C026276.2	Melon (DHL92) v3.6.1	carmedB0989
Carg07663	CsaV3_1G001280	Cucumber (Chinese Long) v3	carcucB1047
Carg07663	Cla97C01G012420	Watermelon (97103) v2	carwmbB1058
Carg07663	Cla97C06G126900	Watermelon (97103) v2	carwmbB1064
Carg07663	Bhi08G001336	Wax gourd	carwgoB1180
Carg07663	Bhi02G000371	Wax gourd	carwgoB1185

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg07663	Carg10332	Silver-seed gourd	carcarB394

The following block(s) are covering this gene:


Gene	Organism	Block
Carg07663	Silver-seed gourd	carcarB312
Carg07663	Silver-seed gourd	carcarB482
Carg07663	Cucumber (Gy14) v2	carcgybB0989
Carg07663	Cucumber (Gy14) v2	carcgybB0991
Carg07663	Cucumber (Gy14) v1	carcgyB1120
Carg07663	Cucurbita maxima (Rimu)	carcmaB1396
Carg07663	Cucurbita moschata (Rifu)	carcmoB1347
Carg07663	Cucurbita moschata (Rifu)	carcmoB1351
Carg07663	Cucurbita pepo (Zucchini)	carcpeB1394
Carg07663	Cucurbita pepo (Zucchini)	carcpeB1403
Carg07663	Wild cucumber (PI 183967)	carcpiB1041
Carg07663	Wild cucumber (PI 183967)	carcpiB1043
Carg07663	Cucumber (Chinese Long) v2	carcuB1017
Carg07663	Cucumber (Chinese Long) v2	carcuB1019
Carg07663	Cucumber (Chinese Long) v3	carcucB1046
Carg07663	Cucumber (Chinese Long) v3	carcucB1048
Carg07663	Bottle gourd (USVL1VR-Ls)	carlsiB918
Carg07663	Melon (DHL92) v3.5.1	carmeB0976
Carg07663	Melon (DHL92) v3.5.1	carmeB0978
Carg07663	Melon (DHL92) v3.6.1	carmedB0986
Carg07663	Melon (DHL92) v3.6.1	carmedB0988
Carg07663	Watermelon (Charleston Gray)	carwcgB0980
Carg07663	Watermelon (97103) v1	carwmB1002
Carg07663	Watermelon (97103) v1	carwmB1003
Carg07663	Watermelon (97103) v2	carwmbB1060
Carg07663	Watermelon (97103) v2	carwmbB1065
Carg07663	Wax gourd	carwgoB1174