Csa7G449440 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G449440
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 18518804 .. 18519484 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCTCATAGTAATCTACTGACTAGATTCATATCAAAGATTATATCTCCATTGACTTCATTTGGATAATCTTGTAGGATCTATGTTGTATATACCTTTTTGGCGGCTGTTTAATGGATGAGAGGTATTTTGTTATCTTTATGTTCTTTTCAGCTTCCTAATTTTGAATTATTTATTTGCCGATCATTCTTTTCTTTACATCTTTTTTATTTTGTTTACAGTTGTACATTGCCTGATAAGACCTTATCAACCACAGAAAGTTCAATCATATTTGGTCGTAATGAAGATCTACTTATTTACAAAATCATGGTATTTTTTTTTTGTCTATACCATTTGCTTAGTTTTTCGTATTTTCTTACCTCTTTTCATTCGTTACGATACGTTATGTCGATTATTTAAAACATGATAAATTTTGTTTCTTGGTTTCTGGCTCTGCATCACTGGATAAAGCTTATCAGCAATTCCGATTTGTATATTCTAGTCAAATATTAGTTTGTGCCATCATGAAATAAAAATCTCAAGTTTGAATTTCAAGCTCTCATTAGGGTTAATCCTAAGAACCAACTTCTTCTTTTTTTAATTGCAGACATGGAGGTCTTGTTTAAACGTTGTTTTTATATTTAGTAGGAGACTCTCTTTGAACCCTGAATGTTTATCGACATGCACCTGTCACATTTGA

mRNA sequence

ATGGATCTCATAGATCTATGTTGTATATACCTTTTTGGCGGCTGTTTAATGGATGAGAGTTGTACATTGCCTGATAAGACCTTATCAACCACAGAAAGTTCAATCATATTTGGTCGTAATGAAGATCTACTTATTTACAAAATCATGACATGGAGGTCTTGTTTAAACGTTGTTTTTATATTTAGTAGGAGACTCTCTTTGAACCCTGAATGTTTATCGACATGCACCTGTCACATTTGA

Coding sequence (CDS)

ATGGATCTCATAGATCTATGTTGTATATACCTTTTTGGCGGCTGTTTAATGGATGAGAGTTGTACATTGCCTGATAAGACCTTATCAACCACAGAAAGTTCAATCATATTTGGTCGTAATGAAGATCTACTTATTTACAAAATCATGACATGGAGGTCTTGTTTAAACGTTGTTTTTATATTTAGTAGGAGACTCTCTTTGAACCCTGAATGTTTATCGACATGCACCTGTCACATTTGA

Protein sequence

MDLIDLCCIYLFGGCLMDESCTLPDKTLSTTESSIIFGRNEDLLIYKIMTWRSCLNVVFIFSRRLSLNPECLSTCTCHI*
Homology
[Close]
BLAST of Csa7G449440 vs. TrEMBL
Match: A0A0A0K9G6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G449440 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 1.3e-39
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 1 

Query: 1  MDLIDLCCIYLFGGCLMDESCTLPDKTLSTTESSIIFGRNEDLLIYKIMTWRSCLNVVFI 60
          MDLIDLCCIYLFGGCLMDESCTLPDKTLSTTESSIIFGRNEDLLIYKIMTWRSCLNVVFI
Sbjct: 1  MDLIDLCCIYLFGGCLMDESCTLPDKTLSTTESSIIFGRNEDLLIYKIMTWRSCLNVVFI 60

Query: 61 FSRRLSLNPECLSTCTCHI 80
          FSRRLSLNPECLSTCTCHI
Sbjct: 61 FSRRLSLNPECLSTCTCHI 79

[Close]
BLAST of Csa7G449440 vs. NCBI nr
Match: gi|700190251|gb|KGN45484.1| (hypothetical protein Csa_7G449440 [Cucumis sativus])

HSP 1 Score: 169.9 bits (429), Expect = 1.9e-39
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 1 

Query: 1  MDLIDLCCIYLFGGCLMDESCTLPDKTLSTTESSIIFGRNEDLLIYKIMTWRSCLNVVFI 60
          MDLIDLCCIYLFGGCLMDESCTLPDKTLSTTESSIIFGRNEDLLIYKIMTWRSCLNVVFI
Sbjct: 1  MDLIDLCCIYLFGGCLMDESCTLPDKTLSTTESSIIFGRNEDLLIYKIMTWRSCLNVVFI 60

Query: 61 FSRRLSLNPECLSTCTCHI 80
          FSRRLSLNPECLSTCTCHI
Sbjct: 61 FSRRLSLNPECLSTCTCHI 79

The following BLAST results are available for this feature:
BLAST of Csa7G449440 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K9G6_CUCSA1.3e-39100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G449440 PE=4 SV=1[more]
BLAST of Csa7G449440 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700190251|gb|KGN45484.1|1.9e-39100.00hypothetical protein Csa_7G449440 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU117053cucumber EST collection version 3.0transcribed_cluster
CU132295cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G449440.1Csa7G449440.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU132295CU132295transcribed_cluster
CU117053CU117053transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G449440Bottle gourd (USVL1VR-Ls)culsiB503
Csa7G449440Bottle gourd (USVL1VR-Ls)culsiB525
Csa7G449440Bottle gourd (USVL1VR-Ls)culsiB528
Csa7G449440Cucumber (Gy14) v2cgybcuB047
Csa7G449440Cucumber (Gy14) v2cgybcuB193
Csa7G449440Cucumber (Gy14) v2cgybcuB323
Csa7G449440Melon (DHL92) v3.6.1cumedB501
Csa7G449440Melon (DHL92) v3.6.1cumedB524
Csa7G449440Melon (DHL92) v3.6.1cumedB537
Csa7G449440Silver-seed gourdcarcuB0104
Csa7G449440Silver-seed gourdcarcuB0230
Csa7G449440Silver-seed gourdcarcuB0632
Csa7G449440Silver-seed gourdcarcuB0904
Csa7G449440Silver-seed gourdcarcuB1039
Csa7G449440Watermelon (97103) v2cuwmbB535
Csa7G449440Watermelon (97103) v2cuwmbB570
Csa7G449440Wax gourdcuwgoB690
Csa7G449440Wax gourdcuwgoB701
Csa7G449440Wax gourdcuwgoB713
Csa7G449440Cucumber (Chinese Long) v2cucuB046
Csa7G449440Cucumber (Chinese Long) v2cucuB154
Csa7G449440Cucumber (Gy14) v1cgycuB207
Csa7G449440Cucumber (Gy14) v1cgycuB508
Csa7G449440Cucurbita maxima (Rimu)cmacuB047
Csa7G449440Cucurbita maxima (Rimu)cmacuB084
Csa7G449440Cucurbita maxima (Rimu)cmacuB154
Csa7G449440Cucurbita maxima (Rimu)cmacuB383
Csa7G449440Cucurbita maxima (Rimu)cmacuB490
Csa7G449440Cucurbita maxima (Rimu)cmacuB919
Csa7G449440Cucurbita moschata (Rifu)cmocuB035
Csa7G449440Cucurbita moschata (Rifu)cmocuB074
Csa7G449440Cucurbita moschata (Rifu)cmocuB142
Csa7G449440Cucurbita moschata (Rifu)cmocuB373
Csa7G449440Cucurbita moschata (Rifu)cmocuB480
Csa7G449440Cucurbita moschata (Rifu)cmocuB905
Csa7G449440Melon (DHL92) v3.5.1cumeB521
Csa7G449440Melon (DHL92) v3.5.1cumeB546
Csa7G449440Melon (DHL92) v3.5.1cumeB559
Csa7G449440Watermelon (Charleston Gray)cuwcgB524
Csa7G449440Watermelon (Charleston Gray)cuwcgB552
Csa7G449440Watermelon (97103) v1cuwmB580
Csa7G449440Watermelon (97103) v1cuwmB566
Csa7G449440Cucurbita pepo (Zucchini)cpecuB156
Csa7G449440Cucurbita pepo (Zucchini)cpecuB336
Csa7G449440Cucurbita pepo (Zucchini)cpecuB377
Csa7G449440Cucurbita pepo (Zucchini)cpecuB594
Csa7G449440Cucurbita pepo (Zucchini)cpecuB693