Csa7G428240 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G428240
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 16491974 .. 16492225 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGGATTGGTCCAATGTTTACTCCTTAGAGCAGACTGGAAAGACAGGTGGGTGGCAAATTTTTACCTTATCACCTCTCGATGAATATAGCCTTCCCAAGGGCTGGTCTCCTTTTCTAGCCATGATTATGATGTTTCCATGTGGAGGCCATTTGGGGGTCAACAAGGTTGCCCTTAGAGCAAAGACTTGTGCTTGGACAATATTCATGTACGATTCCACCAAGGAAAACATAGACAAAAAAAATTTCTAG

mRNA sequence

ATGAGGGATTGGTCCAATGTTTACTCCTTAGAGCAGACTGGAAAGACAGGTGGGTGGCAAATTTTTACCTTATCACCTCTCGATGAATATAGCCTTCCCAAGGGCTGGTCTCCTTTTCTAGCCATGATTATGATGTTTCCATGTGGAGGCCATTTGGGGGTCAACAAGGTTGCCCTTAGAGCAAAGACTTGTGCTTGGACAATATTCATGTACGATTCCACCAAGGAAAACATAGACAAAAAAAATTTCTAG

Coding sequence (CDS)

ATGAGGGATTGGTCCAATGTTTACTCCTTAGAGCAGACTGGAAAGACAGGTGGGTGGCAAATTTTTACCTTATCACCTCTCGATGAATATAGCCTTCCCAAGGGCTGGTCTCCTTTTCTAGCCATGATTATGATGTTTCCATGTGGAGGCCATTTGGGGGTCAACAAGGTTGCCCTTAGAGCAAAGACTTGTGCTTGGACAATATTCATGTACGATTCCACCAAGGAAAACATAGACAAAAAAAATTTCTAG

Protein sequence

MRDWSNVYSLEQTGKTGGWQIFTLSPLDEYSLPKGWSPFLAMIMMFPCGGHLGVNKVALRAKTCAWTIFMYDSTKENIDKKNF*
Homology
[Close]
BLAST of Csa7G428240 vs. TrEMBL
Match: A0A0A0KBG7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G428240 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.5e-43
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 1 

Query: 1  MRDWSNVYSLEQTGKTGGWQIFTLSPLDEYSLPKGWSPFLAMIMMFPCGGHLGVNKVALR 60
          MRDWSNVYSLEQTGKTGGWQIFTLSPLDEYSLPKGWSPFLAMIMMFPCGGHLGVNKVALR
Sbjct: 1  MRDWSNVYSLEQTGKTGGWQIFTLSPLDEYSLPKGWSPFLAMIMMFPCGGHLGVNKVALR 60

Query: 61 AKTCAWTIFMYDSTKENIDKKNF 84
          AKTCAWTIFMYDSTKENIDKKNF
Sbjct: 61 AKTCAWTIFMYDSTKENIDKKNF 83

[Close]
BLAST of Csa7G428240 vs. NCBI nr
Match: gi|700189903|gb|KGN45136.1| (hypothetical protein Csa_7G428240 [Cucumis sativus])

HSP 1 Score: 181.8 bits (460), Expect = 5.0e-43
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 1 

Query: 1  MRDWSNVYSLEQTGKTGGWQIFTLSPLDEYSLPKGWSPFLAMIMMFPCGGHLGVNKVALR 60
          MRDWSNVYSLEQTGKTGGWQIFTLSPLDEYSLPKGWSPFLAMIMMFPCGGHLGVNKVALR
Sbjct: 1  MRDWSNVYSLEQTGKTGGWQIFTLSPLDEYSLPKGWSPFLAMIMMFPCGGHLGVNKVALR 60

Query: 61 AKTCAWTIFMYDSTKENIDKKNF 84
          AKTCAWTIFMYDSTKENIDKKNF
Sbjct: 61 AKTCAWTIFMYDSTKENIDKKNF 83

The following BLAST results are available for this feature:
BLAST of Csa7G428240 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KBG7_CUCSA3.5e-43100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G428240 PE=4 SV=1[more]
BLAST of Csa7G428240 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189903|gb|KGN45136.1|5.0e-43100.00hypothetical protein Csa_7G428240 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006397 mRNA processing
cellular_component GO:0005575 cellular_component
cellular_component GO:0005829 cytosol
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G428240.1Csa7G428240.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa7G428240CSPI07G19310Wild cucumber (PI 183967)cpicuB354
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G428240Melon (DHL92) v3.5.1cumeB521
Csa7G428240Melon (DHL92) v3.5.1cumeB551
Csa7G428240Watermelon (Charleston Gray)cuwcgB516
Csa7G428240Watermelon (Charleston Gray)cuwcgB531
Csa7G428240Watermelon (Charleston Gray)cuwcgB544
Csa7G428240Watermelon (97103) v1cuwmB554
Csa7G428240Watermelon (97103) v1cuwmB574
Csa7G428240Watermelon (97103) v1cuwmB602
Csa7G428240Cucurbita pepo (Zucchini)cpecuB161
Csa7G428240Cucurbita pepo (Zucchini)cpecuB302
Csa7G428240Cucurbita pepo (Zucchini)cpecuB343
Csa7G428240Cucurbita pepo (Zucchini)cpecuB589
Csa7G428240Cucurbita pepo (Zucchini)cpecuB633
Csa7G428240Cucurbita pepo (Zucchini)cpecuB768
Csa7G428240Bottle gourd (USVL1VR-Ls)culsiB503
Csa7G428240Bottle gourd (USVL1VR-Ls)culsiB516
Csa7G428240Bottle gourd (USVL1VR-Ls)culsiB530
Csa7G428240Cucumber (Gy14) v2cgybcuB049
Csa7G428240Cucumber (Gy14) v2cgybcuB150
Csa7G428240Cucumber (Gy14) v2cgybcuB323
Csa7G428240Melon (DHL92) v3.6.1cumedB501
Csa7G428240Melon (DHL92) v3.6.1cumedB525
Csa7G428240Melon (DHL92) v3.6.1cumedB528
Csa7G428240Silver-seed gourdcarcuB0387
Csa7G428240Silver-seed gourdcarcuB0484
Csa7G428240Silver-seed gourdcarcuB0554
Csa7G428240Silver-seed gourdcarcuB0783
Csa7G428240Silver-seed gourdcarcuB0944
Csa7G428240Watermelon (97103) v2cuwmbB517
Csa7G428240Watermelon (97103) v2cuwmbB528
Csa7G428240Watermelon (97103) v2cuwmbB537
Csa7G428240Watermelon (97103) v2cuwmbB561
Csa7G428240Wax gourdcuwgoB650
Csa7G428240Wax gourdcuwgoB680
Csa7G428240Wax gourdcuwgoB704
Csa7G428240Cucumber (Chinese Long) v2cucuB047
Csa7G428240Cucumber (Chinese Long) v2cucuB127
Csa7G428240Cucumber (Gy14) v1cgycuB208
Csa7G428240Cucurbita maxima (Rimu)cmacuB083
Csa7G428240Cucurbita maxima (Rimu)cmacuB158
Csa7G428240Cucurbita maxima (Rimu)cmacuB272
Csa7G428240Cucurbita maxima (Rimu)cmacuB388
Csa7G428240Cucurbita maxima (Rimu)cmacuB496
Csa7G428240Cucurbita maxima (Rimu)cmacuB577
Csa7G428240Cucurbita maxima (Rimu)cmacuB646
Csa7G428240Cucurbita maxima (Rimu)cmacuB914
Csa7G428240Cucurbita moschata (Rifu)cmocuB260
Csa7G428240Cucurbita moschata (Rifu)cmocuB378
Csa7G428240Cucurbita moschata (Rifu)cmocuB485
Csa7G428240Cucurbita moschata (Rifu)cmocuB564
Csa7G428240Cucurbita moschata (Rifu)cmocuB635
Csa7G428240Cucurbita moschata (Rifu)cmocuB900